Chemistry Commons^™

Colloidal Synthesis And Optical Characterizations Of Semiconductor Nanocrystals From Nontoxic Elements, Minh Q. Ho

Theses and Dissertations

To date, the search efforts have shifted from the toxic II-VI, III-V and IV-VI semiconductors to more environmentally friendly materials. Among Group II-V semiconductors, Zn₃P₂ has shown to be a more benign option, similar to Group IV (Ge, Si) materials, for future applications in photovoltaics and optoelectronics. This work is dedicated to the development of wet-chemical synthetic routes of (1) Zn₃P₂ and (2) Group IV (Ge, Si, Si_1-xGe_x) nanocrystals with precise control over composition, crystal structure, size and dispersity by adjusting different reaction parameters such as temperature, time and solvent …

Diazaborole Linked Porous Polymers: Design, Synthesis, And Application To Gas Storage And Separation, Zafer Kahveci

Theses and Dissertations

The synthesis of highly porous organic polymers with predefined porosity has attracted considerable attention due to their potential in a wide range of applications. Porous organic polymers (POPs) offer novel properties such as permanent porosity, adjustable chemical nature, and noteworthy thermal and chemical stability. These remarkable properties of the POPs make them promising candidates for use in gas separation and storage. The emission of carbon dioxide (CO₂) from fossil fuel combustion is a major cause of global warming. Finding an efficient separation and/or storage material is essential for creating a cleaner environment. Therefore, the importance of the POPs …

The Use Of Polystyrene-Tethered Fullerenes As Stabilizers In Bulk Heterojunctions, Joshua A. Moore

Theses and Dissertations

Self-assembly of nanoparticles can potentially provide improvements for many current applications and could influence the design of future technologies. The assembly of nanoparticles, which can be controlled through external forces or through molecular interactions, can affect the properties of a material. Nanoparticles can be chemically modified by attaching molecules such as polymers to their surface. The nature and placement of these tethers affects the arrangement of the nanoparticles leading to materials with novel chemical, electrical, and physical properties. In this research, the assembly of the fullerene (C60) based nanoparticles was modified using polystyrene-tethered fullerenes (PTFs) as additives. Polystyrene (PS) was …

Amide Based Metal Complexes For The Catalytic Transformation Of Carbon Dioxide To Cyclic Carbonates, Punnamchandar Ramidi

Theses and Dissertations

Use of carbon dioxide (CO2) for the production of industrially important organic compounds has drawn great deal of attention in recent years, especially in terms of sustainable development based on green chemistry. The use of CO2 as a starting material may replace several toxic C1 synthons such as isocyanates, phosgene etc. Among many reactions involving CO2, synthesis of cyclic carbonate using epoxide under catalytic conditions has drawn major attention. Cyclic carbonates are odorless, colorless, biodegradable solvents which have found several applications as polar solvents, electrolytic material and precursor in the production of polycarbonates as well as pharmaceutical chemicals. However, elevated …

Cationic Metallocene-Containing Polymers: From Synthesis To Applications, Jiuyang Zhang

Theses and Dissertations

Metallopolymers, with the combination of metals and polymeric framworks, have attracted a lot of attention during the past decades. The development of metallopolymers has been largely driven by the desire to combine the synthetic efficiency and versatility of an organic polymer framework with the unique redox, responsive and catalytic properties of inorganic metals. Among different kinds of metallopolymers, metallocene-containing polymers， have been widely utilized for applications ranging from electrochemical sensors to templates for advanced inorganic catalysts to battery materials, due to their unique physicochemical properties. In the first part of my thesis, we showed controlled/living polymerization strategies to prepare well-defined …

Toward The Combinatorial Development Of Hydrophobic-Tagged Antifolate-Directed Degradation Of Human Thymidylate Synthase, Daniel J. Menasco

Theses and Dissertations

Direct post-translational control over a protein of interest (POI) can be exploited by manipulating the cells protein quality-control systems responsible for either intracellular turnover through ubiquitination (POI half-life) or repairing and degrading misfolded proteins.1 In an effort to target and degrade a high value POI we selected the enzyme human thymidylate synthase (TS) for post-translational degradation through ligand-directed ubiquitination and hydrophobic tagging. Thymidylate synthase catalyzes the reductive methylation of 2’-deoxyuridine monophosphate (dUMP) to 2’-deoxythymidine monophosphate (dTMP). As the de novo source of dTMP the regulation of intracellular TS is strictly controlled by ubiquitinindependent proteasomal degradation mediated by an internal TS-degron …

Universal Two-Electron Correlation Operator On Excited States, Bryan Thomas Nichols

Theses and Dissertations

Excited states of chemical systems are extremely important in understanding spectra, chemical phenomena, as well as how a particular compound behaves in reactions. Computationally, excited states are normally very expensive to calculate. The difficulty in calculating these states with wavefunction based methods can be mainly attributed to the calculation of large multi-determinant wavefunctions. One reason to use a complicated multi-determinant wavefunction is to include some of the effects of correlation energy. The quantity of correlation energy can most simply be defined as the reduction in energy caused by any two or more electrons trying to avoid each other. The most …

Surface Functionalization Of Inorganic Substrates With Polymeric Ligands Using Raft Polymerization, Anand Viswanath

Theses and Dissertations

This work focused on using polymers to modify the surface of various inorganic substrates, ranging from TiO2, ITO, CDSe and CdS nanostructures to micron sized silica particles. The synthesis of the polymers using the RAFT technique and the characterization of the functionalized substrates were analyzed in detail to provide insights into their use for various applications. In the first part of this work, novel phosphate based RAFT agents and phosphate containing polymers, including poly(methyl methacrylate) (PMMA), poly(glycidyl methacrylate) (PGMA) and poly(dimethyl siloxane) (PDMS) were synthesized. Alkyne functionalized PGMA was used to click to ITO surfaces in a grafting-to method, and …

Structural Studies And Reactions Of Rhenium And Rhenium-Gold Metal Carbonyl Complexes, Yuen Onn Wong

Theses and Dissertations

The six-membered heavy atom heterocycles [Re2(CO)8(μ-H)(μ-SbPh2)]2, 2.1 and Pd[Re2(CO)8(μ-H)(μ-SbPh2)]2, 2.3, have been prepared by the palladium-catalyzed ring-opening cyclo-dimerization of the three-membered heterocycle Re2(CO)8(μ-H)(μ-SbPh2). The palladium atom that lies in the center of the heterocycle 2.3 was removed to yield 2.1. The palladium removal was found to be partially reversible leading to an unusual example of host-guest behavior. A related dipalladium complex Pd2Re4(μ-Ph)(CO)16(μ4-SbPh)(μ3-SbPh2)(μ-H)2, 2.2, was also formed in these reactions of palladium with Re2(CO)8(μ-H)(μ-SbPh2). Thermolysis of 2.1 at 85 °C yielded Re3(CO)12(μ-SbPh2)(μ-H)2, 2.4 (2.9% yield), Re3(CO)12(μ-SbPh2)2(μ-H), 2.5 (25.1% yield), and Re3(CO)13(μ-SbPh)(μ-H), 2.6 (14.6% yield). The electronic structure of 2.1 and 2.3 …

Microchip Thermal Gradient Gas Chromatography, Anzi Wang

Theses and Dissertations

Although the airbath oven is a reliable heating method for gas chromatography (GC), resistive heating is needed for higher analytical throughput and on-site chemical analysis because of size, heating rate and power requirements. In the last thirty years, a variety of resistive heating methods were developed and implemented for both benchtop and portable GC systems. Although fast heating rates and low power consumption have been achieved, losses in column efficiency and resolution, complex construction processes and difficulties experienced in recovering damaged columns have also become problematic for routine use of resistively heated columns. To solve these problems, a new resistively …

Fabrication, Characterization, Optimization And Application Development Of Novel Thin-Layer Chromatography Plates, Supriya Singh Kanyal

Theses and Dissertations

This dissertation describes advances in the microfabrication of thin layer chromatography (TLC) plates. These plates are prepared by the patterning of carbon nanotube (CNT) forests on substrates, followed by their infiltration with an inorganic material. This document is divided into ten sections or chapters. Chapter 1 reviews the basics of conventional TLC technology. This technology has not changed substantially in decades. This chapter also mentions some of the downsides of the conventional approach, which include unwanted interactions of the binder in the plates with the analytes, relatively slow development times, and only moderately high efficiencies. Chapter 2 focuses primarily on …

Synthesis And Characterization Of Complex Molecular Assemblies On Surfaces, Nitesh Madaan

Theses and Dissertations

The research presented in this dissertation is focused on the construction of complex molecular structures on planar gold and silicon dioxide surfaces using a variety of surface modification techniques, along with thorough surface characterization at each modification step. The dissertation is structured into six separate chapters. In Chapter 1, an introduction to the importance and implications of molecular level surface modification, commonly employed surface modification methods, and available surface characterization techniques is presented. Chapter 2 shows applications of novel methodologies for the functionalization of gold surfaces using alkane dithiol self-assembled monolayers and thiol-ene click chemistry. The resulting functionalized gold substrates …

Chaperone-Mediated Folding And Assembly Of Β-Propeller Proteins Into Cellular Signaling Complexes, Rebecca L. Plimpton

Theses and Dissertations

G protein signaling depends on the ability of the individual subunits of the G protein heterotrimer to assemble into a functional complex. Formation of the G protein βγ (Gβγ) dimer is particularly challenging because it is an obligate dimer in which the individual subunits are unstable on their own. Recent studies have revealed an intricate chaperone system that brings the Gβ and Gγ subunits together. This system includes the cytosolic chaperonin containing TCP-1 (CCT) and a co-chaperone phosducin-like protein 1 (PhLP1). Two key intermediates in the Gβγ assembly process, the Gβ-CCT and the PhLP1-Gβ-CCT complexes, were isolated and their structures …

Oxygen Reduction Reaction And Supercapacitor Studies Of Cobalt Complexes/Carbon Nanotube Composites And Phosphorous, Nitrogen Doped Carbon Materials, Udaya Bhasker Nasini

Theses and Dissertations

In this fast growing population and industrial revolution, excessive energy consumption has become a great challenge. To overcome the situation in the future it is necessary to utilize cheap and renewable resources to produce environmental-friendly, low cost and efficient energy conversion and storage. Fuel cells and supercapacitors are excellent electrochemical energy conversion and storage systems. The coupling of supercapacitors with fuel cells or batteries has the potential to deliver high power necessary in motor vehicles, cellphones, computers and other useful devices. Modern fuel cells are based on electrochemical combination of hydrogen and oxygen in acidic, neutral and alkaline media to …

Ion Structure And Energetics In The Gas Phase Characterized Using Fourier Transfom Ion Cyclotron Resonance Mass Spectrometry, Chad A. Jones

Theses and Dissertations

In this dissertation, I use Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) to study the structure and energetics of gas phase ions. Infrared multiphoton dissociation spectroscopy (IRMPD) is a technique for measuring the IR spectrum of gas phase ions in a Penning trap. I use this technique to investigate the conformation of cucurbituril complexes, terminal diamines, and protonated amino acids. Cross sectional areas by Fourier transform ion cyclotron resonance mass spectrometry (CRAFTI) is a technique developed by the Dearden lab to measure the cross section of gas phase ions. In this work, I further develop a fundamental understanding of …

Simple, Label-Free And Non-Instrumented Analyte Quantitation By Flow Distance Measurement In Microfluidic Devices, Debolina Chatterjee

Theses and Dissertations

Rapid determination of the concentrations of molecules related to diseases can provide timely information for treatment options. However, most biomarker quantitation methods require costly and complex equipment. On the other hand, point-of-care systems have less complex instrumentation needs than laboratory-based equipment, but often provide less information; for example, biomarker presence or absence instead of concentration. A complete analysis setup addressing key limitations of both laboratory-based and portable systems is highly desirable. I developed microfluidic devices with visual inspection readout of a target’s concentration from microliter volumes of solution flowed into a microchannel. Microchannels are formed within polydimethylsiloxane (PDMS), and the …

Biopolymeric Hydrogels Functionalized With Tobacco Mosaic Virus For In Vitro Three Dimensional Culture And Differentiation Of Stem Cells And In Vivo Tissue Regeneration, Jittima Amie Luckanagul

Theses and Dissertations

Plant viruses have been highlighted among material research due to their well-defined structures in nanoscale, mono-dispersity, stability, and chemical functionalities. Each of the thousands coated protein subunits on a viral nanoparticle can be homogenously modified, chemically, and genetically with a functional ligand leading to a high-density and spatial distribution of ligands on each particle (multivalency). Many reports from our group have clearly shown that virus coated substrates induced the acceleration of bone marrow stromal cells differentiation into bone cells. We hypothesized that this phenomenon could rely on the multivalency that the viral nanoparticle has to offer. Moving to a more …

Synthesis, Characterization And Optical Properties Of Conjugated Boronate-Linked Materials And Their Applications In Optical Sensing Of Lewis Bases, Min Cai

Theses and Dissertations

Organoboron compounds, with Lewis acidic boron centers, have been emerged as an important class of materials, especially in the area of chemical sensors. Herein, boranes and boronate esters in the sensing perspective were overviewed in Chapter 1. Examples of synthesis and sensing applications of boron-containing conjugated polymers were highlighted.

Boronate ester formation provides the advantages of facile synthesis, tunable optical properties, enhanced stability and planar geometry. Thus, boronate esters, especially dioxaboroles, were proposed to use as alternatives of boranes to design better sensors for Lewis bases. Based on the previous investigation of fluorenyl bis- and poly- dioxaboroles by our group, …

Novel Monomers And Solution Polymerization Methods For Polybenzimidazole Polymers, Jason Hoffman

Theses and Dissertations

The goal of this work was to identify and study various monomers and polymerization methods for polybenzimidazole polymers. Beginning with the solution polymerization of polybenzimidazole via a bisulfite adduct monomer, Chapter 2 describes the efforts to optimize and scale up this process. Chapter 3 then covers an alternative method to prepare polybenzimidazole in solution by using an orthoester monomer. Finally, in Chapter 4, the research to incorporate an adamantane moiety into the backbone of polybenzimidazole is described.

Carboxylate Selective Lanthanide Imprinted Polymer Sensors For Sensor Array, Yang Xu

Theses and Dissertations

A europium-based molecularly imprinted polymer (MIP) was developed and characterized, which combined the highly luminescent properties of europium and the recognition properties of molecularly imprinted polymers. The europium-based MIPs were used as selective sensors for different types of carboxylates. The ultimate goal of this work was to develop a europium-based sensor array to differentiate carboxylates anions. The polymer was synthesized by using a europium–salen complex as the monomer and ethylene glycol dimethacrylate (EGDMA) as the crosslinker. First, a europium containing non-imprinted polymer (NIP) and a series of europium containing MIPs imprinted with acetate, benzoate and phenylacetate were synthesized by free …

Insights Into The Evolutional Adaptations And Functional Switching Mechanism In Dual Function Hemoglobin/Dehaloperoxidase (Dhp) And Modeling Of Cytochrome P450 Active Site With H93g Myoglobin Cavity Mutant, Shengfang Sun

Theses and Dissertations

The coelomic hemoglobin, dehaloperoxidase (DHP), from the sea worm Amphitrite ornata, is a dual function oxygen-binding heme protein that also possesses a significant peroxidase activity. As evolved from an ancient oxygen carrier globin, several structural adaptations have enabled DHP to evolutionally gain significantly enhanced peroxidase capability for self-protection while only minimally compromising its primary function as an O2 carrier. To elucidate these adaptations, the peroxidase activities and O2 affinities of several DHP and sperm whale myoglobin (Mb) mutants have been prepared. Several heme environmental structural factors that regulate the dual functions of DHP have been found, providing insight into how …

Synthesis And Characterization Of Polymer Nanomaterials Using Controlled Radical Polymerization, Lei Wang

Theses and Dissertations

This research focuses on creating and investigating polymer/organic bound interfaces on nanoparticles with advanced architectures to tailor the properties of polymer nanocomposites for various applications. Reversible addition-fragmentation chain transfer (RAFT) polymerization and a toolbox of surface functionalization from the simple to the advanced were developed to prepare the polymer nanomaterials.

In the first part (Chapter 2), a variety of RAFT agents (xanthate, dithiocarbamate and trithiocarbonate) were used to mediate the polymerizations of several classes of free radical polymerizable monomers. These monomers consist of styrene, methyl acrylate, methyl methacrylate, vinyl acetate and isoprene, which have different activities and require different classes …

Mechanistic Investigation Of A Silylation-Based Kinetic Resolution Using Linear Free Energy Relationships And Its Application To Substrate Expansion And Polymer Supported Kinetic Resolutions, Ravish K. Akhani

Theses and Dissertations

This dissertation represents our preliminary mechanistic investigations on the silylation-based kinetic resolution of secondary alcohols, and how we use that knowledge for further expansion of this methodology. Chapter 2 describes how we came up with a preliminary mechanism of our silylation-based methodology using a linear free energy relationship and a rate study. In this chapter, several para substituted triphenylsilyl chlorides were prepared that varied electronically and sterically in order to understand the substituent effects on the rate and the selectivity of the reaction. Selectivity factors and initial rates were experimentally determined for the kinetic resolution reactions with the newly designed …

Investigation Into The Synthesis And Characterization Of Poly(Dioxaborolane)S, Shakena Daniel

Theses and Dissertations

Boronate esters have evolved from being primarily used as sensors to being the integral linkage in complex materials such as macrocycles, covalent organic frameworks, and linear polymers. Poly(boronate)s, linear polymers that are linked via a boronate ester, have not been extensively researched. In 2005, the Lavigne group published the first manuscript on poly(dioxaborolane)s, i.e., six-membered, nonconjugated polyboronates. The behavior of the materials in solution was studied extensively, but little is known about the solid state properties of the material other than they form brittle films.

Poly(dioxaborolane)s are generated in high yield through a facile step-growth polymerization, but the reaction parameters, …

Design, Synthesis, Characterization, And Evaluation Of Surface Modified Boronate Ester Covalent Organic Frameworks, Matthew W. Di Carmine

Theses and Dissertations

Covalent Organic Frameworks (COFs) were first reported in 2005 and are analogous to Metal Organic Frameworks (MOFs), with proposed applications in separation, storage and sequestration. Since COFs are comprised of lighter elements they are considered more advantageous for weight-sensitive applications. However, COFs are susceptible to degradation by weak nucleophiles such as water (i.e. hydrolysis). The Lavigne group has focused on developing structure-property relationships for COFs. It was previously demonstrated that the porosity of the COFs could be tailored by incorporating small alkyl chains on one monomer. Inclusion of these alkylated monomers into COF materials effectively increased the COF hydrophobicity resulting …

Synthesis Of 4'-Ester Resveratrol Analogues, Chromium Trioxide Oxidation Of Terpenes, And Synthesis Of Mimics Of (-)-Englerin A, Mark Jeffrey Acerson

Theses and Dissertations

4’ -ester analogues of resveratrol were synthesized using reaction conditions developed to produce mono-ester products in the presence of two other unprotected phenols. Basic conditions were employed to deprotonate the most acidic 4’ phenol followed by addition of anhydrides or acid chlorides to give the ester product. The reaction favored 4’-ester formation in polar aprotic solvents with DMSO being the optimal solvent.

(—)-Englerin A is a guaiane-type sesquiterpene containing two ester side chains. Mimics of (—)-englerin A were proposed that retained the ester side chains while replacing the non-polar core with less complicated structures. These proposed mimic cores would maintain …

Extension And Applications Of The Gvvpt2 Method To The Study Of Transition Metals, Patrick K. Tamukong

Theses and Dissertations

The ground and low-lying excited electronic states of molecules of the first ( 2 Sc , 2 Cr , 2 Mn , and 2 Ni ) and second ( 2 Y , 2 Mo , and 2 Tc ) row of transition elements have been investigated for the first time with the generalized Van Vleck second order multireference perturbation theory (GVVPT2) method, a variant of MRPT. All potential energy curves (PECs) obtained in these studies were smooth and continuous; that is, they are free from wiggles or inflexion points. In order to account for relativistic effects, which become important in …

High-Performance Polymer Monoliths For Capillary Liquid Chromatography, Pankaj Aggarwal

Theses and Dissertations

This dissertation focuses on improving the chromatographic efficiency of polymeric organic monoliths by characterizing and optimizing the bed morphology. In-situ characterization techniques such as capillary flow porometry (CFP), 3-dimensional scanning electron microscopy (3D SEM) and conductivity measurements were developed and implemented to quantitatively characterize the morphology of poly(ethylene glycol) diacrylate (PEGDA) monoliths. The CFP measurements for monoliths prepared by the same procedure in capillaries with different diameters (i.e., 75, 150, and 250 μm) clearly showed a change in average through-pore size with capillary diameter, thus, certifying the need for in-situ measurement techniques. Serial sectioning and imaging of PEGDA monoliths using …

Discovery Of An Allosteric Site On Furin, Contributing To Potent Inhibition: A Promising Therapeutic For The Anemia Of Chronic Inflammation, Andrew Jacob Gross

Theses and Dissertations

Release Date: October 2017

Anemia of chronic inflammation (ACI) is a condition that develops in a setting of chronic immune activation. ACI is characterized and triggered by inflammatory cytokines and the disruption of iron homeostasis. Hepcidin, a small peptide hormone, is the master regulator of iron homeostasis, and rapidly responds to iron supply and demand. Under conditions of chronic inflammation, hepcidin is elevated, and alters the way that iron is absorbed and disrupted throughout the body, resulting in disrupted iron homeostasis through inhibition of the iron exporter protein ferroportin. Anemia arises when insufficient erythropoietic activity combined with inadequate iron supply …

Bioinformatic Solutions To Complex Problems In Mass Spectrometry Based Analysis Of Biomolecules, Ryan M. Taylor

Theses and Dissertations

Biological research has benefitted greatly from the advent of omic methods. For many biomolecules, mass spectrometry (MS) methods are most widely employed due to the sensitivity which allows low quantities of sample and the speed which allows analysis of complex samples. Improvements in instrument and sample preparation techniques create opportunities for large scale experimentation. The complexity and volume of data produced by modern MS-omic instrumentation challenges biological interpretation, while the complexity of the instrumentation, sample noise, and complexity of data analysis present difficulties in maintaining and ensuring data quality, validity, and relevance. We present a corpus of tools which improves …