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Full-Text Articles in Non-linear Dynamics

Multiscale Modelling Of Brain Networks And The Analysis Of Dynamic Processes In Neurodegenerative Disorders, Hina Shaheen Jan 2024

Multiscale Modelling Of Brain Networks And The Analysis Of Dynamic Processes In Neurodegenerative Disorders, Hina Shaheen

Theses and Dissertations (Comprehensive)

The complex nature of the human brain, with its intricate organic structure and multiscale spatio-temporal characteristics ranging from synapses to the entire brain, presents a major obstacle in brain modelling. Capturing this complexity poses a significant challenge for researchers. The complex interplay of coupled multiphysics and biochemical activities within this intricate system shapes the brain's capacity, functioning within a structure-function relationship that necessitates a specific mathematical framework. Advanced mathematical modelling approaches that incorporate the coupling of brain networks and the analysis of dynamic processes are essential for advancing therapeutic strategies aimed at treating neurodegenerative diseases (NDDs), which afflict millions of …


Computational Modeling Using A Novel Continuum Approach Coupled With Pathway-Informed Neural Networks To Optimize Dynein-Mediated Centrosome Positioning In Polarized Cells, Arkaprovo Ghosal, Padmanabhan Seshaiyar Dr., Adriana Dawes Dr., General Genomics Inc. Nov 2023

Computational Modeling Using A Novel Continuum Approach Coupled With Pathway-Informed Neural Networks To Optimize Dynein-Mediated Centrosome Positioning In Polarized Cells, Arkaprovo Ghosal, Padmanabhan Seshaiyar Dr., Adriana Dawes Dr., General Genomics Inc.

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


The Magnetic Field Of Protostar-Disk-Outflow Systems, Mahmoud Sharkawi Apr 2023

The Magnetic Field Of Protostar-Disk-Outflow Systems, Mahmoud Sharkawi

Electronic Thesis and Dissertation Repository

Recent observations of protostellar cores reveal complex magnetic field configurations that are distorted in the innermost disk region. Unlike the prestellar phase, where the magnetic field geometry is simpler with an hourglass configuration, magnetic fields in the protostellar phase are sculpted by the formation of outflows and rapid rotation. This gives rise to a significant azimuthal (or toroidal) component that has not yet been analytically modelled in the literature. Moreover, the onset of outflows, which act as angular momentum transport mechanisms, have received considerable attention in the past few decades. Two mechanisms: 1) the driving by the gradient of a …


Fourth Order Dispersion In Nonlinear Media, Georgios Tsolias Apr 2023

Fourth Order Dispersion In Nonlinear Media, Georgios Tsolias

Doctoral Dissertations

In recent years, there has been an explosion of interest in media bearing quartic
dispersion. After the experimental realization of so-called pure-quartic solitons, a
significant number of studies followed both for bright and for dark solitonic struc-
tures exploring the properties of not only quartic, but also setic, octic, decic etc.
dispersion, but also examining the competition between, e.g., quadratic and quartic
dispersion among others.
In the first chapter of this Thesis, we consider the interaction of solitary waves in
a model involving the well-known φ4 Klein-Gordon theory, bearing both Laplacian and biharmonic terms with different prefactors. As a …


Continuum Model Of Faceted Ice Crystal Growth In Cirrus Clouds In 1 Dimension, Ella Slattery Jan 2023

Continuum Model Of Faceted Ice Crystal Growth In Cirrus Clouds In 1 Dimension, Ella Slattery

Summer Research

Ice crystals in cirrus clouds exhibit stable faceted growth and roughening which affects reflectivity. A numerically stable modelling system of partial differential equations representing the thickness of ice surfaces over time may assist in describing these features. A sinusoidal relationship between total thickness and water vapor deposition on the surface of ice crystals was observed experimentally; the modelling equation for this relationship was applied to the system in order to develop a one variable model. The developed one variable models continue to exhibit numerical instabilities prior to a Fourier Transform. Stable limit cycles of ice growth were observed in the …


Integrable Systems On Symmetric Spaces From A Quadratic Pencil Of Lax Operators, Rossen Ivanov Jan 2023

Integrable Systems On Symmetric Spaces From A Quadratic Pencil Of Lax Operators, Rossen Ivanov

Conference papers

The article surveys the recent results on integrable systems arising from quadratic pencil of Lax operator L, with values in a Hermitian symmetric space. The counterpart operator M in the Lax pair defines positive, negative and rational flows. The results are illustrated with examples from the A.III symmetric space. The modeling aspect of the arising higher order nonlinear Schrödinger equations is briefly discussed.


The Gelfand Problem For The Infinity Laplacian, Fernando Charro, Byungjae Son, Peiyong Wang Apr 2022

The Gelfand Problem For The Infinity Laplacian, Fernando Charro, Byungjae Son, Peiyong Wang

Mathematics Faculty Research Publications

We study the asymptotic behavior as p → ∞ of the Gelfand problem

−Δpu = λeu in Ω ⊂ Rn, u = 0 on ∂Ω.

Under an appropriate rescaling on u and λ, we prove uniform convergence of solutions of the Gelfand problem to solutions of

min{|∇u|−Λeu, −Δu} = 0 in Ω, u = 0 on ∂Ω.

We discuss existence, non-existence, and multiplicity of solutions of the limit problem in terms of Λ.


Symphas: A Modular Api For Phase-Field Modeling Using Compile-Time Symbolic Algebra, Steven A. Silber Aug 2021

Symphas: A Modular Api For Phase-Field Modeling Using Compile-Time Symbolic Algebra, Steven A. Silber

Electronic Thesis and Dissertation Repository

The phase-field method is a common approach to qualitative analysis of phase transitions. It allows visualizing the time evolution of a phase transition, providing valuable insight into the underlying microstructure and the dynamical processes that take place. Although the approach is applied in a diverse range of fields, from metal-forming to cardiac modelling, there are a limited number of software tools available that allow simulating any phase-field problem and that are highly accessible. To address this, a new open source API and software package called SymPhas is developed for simulating phase-field and phase-field crystal in 1-, 2- and 3-dimensions. Phase-field …


Lecture 07: Nonlinear Preconditioning Methods And Applications, Xiao-Chuan Cai Apr 2021

Lecture 07: Nonlinear Preconditioning Methods And Applications, Xiao-Chuan Cai

Mathematical Sciences Spring Lecture Series

We consider solving system of nonlinear algebraic equations arising from the discretization of partial differential equations. Inexact Newton is a popular technique for such problems. When the nonlinearities in the system are well-balanced, Newton's method works well, but when a small number of nonlinear functions in the system are much more nonlinear than the others, Newton may converge slowly or even stagnate. In such a situation, we introduce some nonlinear preconditioners to balance the nonlinearities in the system. The preconditioners are often constructed using a combination of some domain decomposition methods and nonlinear elimination methods. For the nonlinearly preconditioned problem, …


Multicomponent Fokas-Lenells Equations On Hermitian Symmetric Spaces, Vladimir Gerdjikov, Rossen Ivanov Jan 2021

Multicomponent Fokas-Lenells Equations On Hermitian Symmetric Spaces, Vladimir Gerdjikov, Rossen Ivanov

Articles

Multi-component integrable generalizations of the Fokas-Lenells equation, associated with each irreducible Hermitian symmetric space are formulated. Description of the underlying structures associated to the integrability, such as the Lax representation and the bi-Hamiltonian formulation of the equations is provided. Two reductions are considered as well, one of which leads to a nonlocal integrable model. Examples with Hermitian symmetric spaces of all classical series of types A.III, BD.I, C.I and D.III are presented in details, as well as possibilities for further reductions in a general form.


Five-Wave Resonances In Deep Water Gravity Waves: Integrability, Numerical Simulations And Experiments, Dan Lucas, Marc Perlin, Dian-Yong Liu, Shane Walsh, Rossen Ivanov, Miguel D. Bustamante Jan 2021

Five-Wave Resonances In Deep Water Gravity Waves: Integrability, Numerical Simulations And Experiments, Dan Lucas, Marc Perlin, Dian-Yong Liu, Shane Walsh, Rossen Ivanov, Miguel D. Bustamante

Articles

In this work we consider the problem of finding the simplest arrangement of resonant deep water gravity waves in one-dimensional propagation, from three perspectives: Theoretical, numerical and experimental. Theoretically this requires using a normal-form Hamiltonian that focuses on 5-wave resonances. The simplest arrangement is based on a triad of wave vectors K1 + K2 = K3 (satisfying specific ratios) along with their negatives, corresponding to a scenario of encountering wave packets, amenable to experiments and numerical simulations. The normal-form equations for these encountering waves in resonance are shown to be non-integrable, but they admit an integrable reduction …


The Revised Nim For Solving The Non-Linear System Variant Boussinesq Equations And Comparison With Nim, Oday Ahmed Jasim Dec 2020

The Revised Nim For Solving The Non-Linear System Variant Boussinesq Equations And Comparison With Nim, Oday Ahmed Jasim

Karbala International Journal of Modern Science

This research aims to guide researchers to use a new method, and it is the Revised New Iterative Method (RNIM) to solve partial differential equation systems and apply them to solve problems in various disciplines such as chemistry, physics, engineering and medicine. In this paper, the numerical solutions of the nonlinear Variable Boussinesq Equation System (VBE) were obtained using a new modified iterative method (RNIM); this was planned by (Bhaleker and Datterder-Gejj). A numerical solution to the Variable Boussinesq Equation System (VBE) was also found using a widely known method, a new iterative method (NIM). By comparing the numerical solutions …


Numerical Simulations Of Nonlinear Waves And Their Stability: Stokes Waves And Nonlinear Schroedinger Equation, Anastassiya Semenova Nov 2020

Numerical Simulations Of Nonlinear Waves And Their Stability: Stokes Waves And Nonlinear Schroedinger Equation, Anastassiya Semenova

Mathematics & Statistics ETDs

The present work offers an investigation of dynamics and stability of nonlinear waves in Hamiltonian systems. The first part of the manuscript discusses the classical problem of water waves on the surface of an ideal fluid in 2D. We demonstrate how to construct the Stokes waves, and how to apply a continuation method to find waves in close vicinity to the limiting Stokes wave. We provide new insight into the stability of the Stokes waves by identifying previously inaccessible branches of instability in the equations of motion for the fluid. We provide numerical evidence that pairs of unstable eigenvalues of …


Singularities And Global Solutions In The Schrodinger-Hartree Equation, Anudeep Kumar Jun 2020

Singularities And Global Solutions In The Schrodinger-Hartree Equation, Anudeep Kumar

FIU Electronic Theses and Dissertations

In 1922, Louis de Broglie proposed wave-particle duality and introduced the idea of matter waves. In 1925, Erwin Schrodinger, proposed a wave equation for de Broglie’s matter waves. The Schrodinger equation is described using the de Broglie’s matter wave, which takes the wave function, and describes its quantum state over time.

Herein, we study the generalized Hartree (gHartree) equation, which is a nonlinear Schrodinger type equation except now the nonlinearities are a nonlocal (convolution) type. In the gHartree equation, the influence on the behavior of the solutions is global as opposed to the case of local (power type) nonlinearities.

Our …


Teaching And Learning Of Fluid Mechanics, Ashwin Vaidya Apr 2020

Teaching And Learning Of Fluid Mechanics, Ashwin Vaidya

Department of Mathematics Facuty Scholarship and Creative Works

Fluid mechanics occupies a privileged position in the sciences; it is taught in various science departments including physics, mathematics, environmental sciences and mechanical, chemical and civil engineering, with each highlighting a different aspect or interpretation of the foundation and applications of fluids. Doll’s fluid analogy [5] for this idea is especially relevant to this issue: “Emergence of creativity from complex flow of knowledge—example of Benard convection pattern as an analogy—dissipation or dispersal of knowledge (complex knowledge) results in emergent structures, i.e., creativity which in the context of education should be thought of as a unique way to arrange information so …


The Analysis Of Neural Heterogeneity Through Mathematical And Statistical Methods, Kyle Wendling Jan 2020

The Analysis Of Neural Heterogeneity Through Mathematical And Statistical Methods, Kyle Wendling

Theses and Dissertations

Diversity of intrinsic neural attributes and network connections is known to exist in many areas of the brain and is thought to significantly affect neural coding. Recent theoretical and experimental work has argued that in uncoupled networks, coding is most accurate at intermediate levels of heterogeneity. I explore this phenomenon through two distinct approaches: a theoretical mathematical modeling approach and a data-driven statistical modeling approach.

Through the mathematical approach, I examine firing rate heterogeneity in a feedforward network of stochastic neural oscillators utilizing a high-dimensional model. The firing rate heterogeneity stems from two sources: intrinsic (different individual cells) and network …


Swirling Fluid Flow In Flexible, Expandable Elastic Tubes: Variational Approach, Reductions And Integrability, Rossen Ivanov, Vakhtang Putkaradze Jan 2020

Swirling Fluid Flow In Flexible, Expandable Elastic Tubes: Variational Approach, Reductions And Integrability, Rossen Ivanov, Vakhtang Putkaradze

Articles

Many engineering and physiological applications deal with situations when a fluid is moving in flexible tubes with elastic walls. In real-life applications like blood flow, a swirl in the fluid often plays an important role, presenting an additional complexity not described by previous theoretical models. We present a theory for the dynamics of the interaction between elastic tubes and swirling fluid flow. The equations are derived using a variational principle, with the incompressibility constraint of the fluid giving rise to a pressure-like term. In order to connect this work with the previous literature, we consider the case of inextensible and …


On The Intermediate Long Wave Propagation For Internal Waves In The Presence Of Currents, Joseph Cullen, Rossen Ivanov Jan 2020

On The Intermediate Long Wave Propagation For Internal Waves In The Presence Of Currents, Joseph Cullen, Rossen Ivanov

Articles

A model for the wave motion of an internal wave in the presence of current in the case of intermediate long wave approximation is studied. The lower layer is considerably deeper, with a higher density than the upper layer. The flat surface approximation is assumed. The fluids are incompressible and inviscid. The model equations are obtained from the Hamiltonian formulation of the dynamics in the presence of a depth-varying current. It is shown that an appropriate scaling leads to the integrable Intermediate Long Wave Equation (ILWE). Two limits of the ILWE leading to the integrable Benjamin-Ono and KdV equations are …


Camassa-Holm Cuspons, Solitons And Their Interactions Via The Dressing Method, Rossen Ivanov, Tony Lyons, Nigel Orr Jan 2020

Camassa-Holm Cuspons, Solitons And Their Interactions Via The Dressing Method, Rossen Ivanov, Tony Lyons, Nigel Orr

Articles

A dressing method is applied to a matrix Lax pair for the Camassa–Holm equation, thereby allowing for the construction of several global solutions of the system. In particular, solutions of system of soliton and cuspon type are constructed explicitly. The interactions between soliton and cuspon solutions of the system are investigated. The geometric aspects of the Camassa–Holm equation are re-examined in terms of quantities which can be explicitly constructed via the inverse scattering method.


Mathematical Models: The Lanchester Equations And The Zombie Apocalypse, Hailey Bauer Apr 2019

Mathematical Models: The Lanchester Equations And The Zombie Apocalypse, Hailey Bauer

Undergraduate Theses and Capstone Projects

This research study used mathematical models to analyze and depicted specific battle situations and the outcomes of the zombie apocalypse. The original models that predicted warfare were the Lanchester models, while the zombie apocalypse models were fictional expansions upon mathematical models used to examine infectious diseases. In this paper, I analyzed and compared different mathematical models by examining each model’s set of assumptions and the impact of the change in variables on the population classes. The purpose of this study was to understand the basics of the discrete dynamical systems and to determine the similarities between imaginary and realistic models. …


Riemann-Hilbert Problem, Integrability And Reductions, Vladimir Gerdjikov, Rossen Ivanov, Aleksander Stefanov Jan 2019

Riemann-Hilbert Problem, Integrability And Reductions, Vladimir Gerdjikov, Rossen Ivanov, Aleksander Stefanov

Articles

Abstract. The present paper is dedicated to integrable models with Mikhailov reduction groups GR ≃ Dh. Their Lax representation allows us to prove, that their solution is equivalent to solving Riemann-Hilbert problems, whose contours depend on the realization of the GR-action on the spectral parameter. Two new examples of Nonlinear Evolution Equations (NLEE) with Dh symmetries are presented.


Surface Waves Over Currents And Uneven Bottom, Alan Compelli, Rossen Ivanov, Calin I. Martin, Michail D. Todorov Jan 2019

Surface Waves Over Currents And Uneven Bottom, Alan Compelli, Rossen Ivanov, Calin I. Martin, Michail D. Todorov

Articles

The propagation of surface water waves interacting with a current and an uneven bottom is studied. Such a situation is typical for ocean waves where the winds generate currents in the top layer of the ocean. The role of the bottom topography is taken into account since it also influences the local wave and current patterns. Specific scaling of the variables is selected which leads to approximations of Boussinesq and KdV types. The arising KdV equation with variable coefficients, dependent on the bottom topography, is studied numerically when the initial condition is in the form of the one soliton solution …


Equatorial Wave–Current Interactions, Adrian Constantin, Rossen Ivanov Jan 2019

Equatorial Wave–Current Interactions, Adrian Constantin, Rossen Ivanov

Articles

We study the nonlinear equations of motion for equatorial wave–current interactions in the physically realistic setting of azimuthal two-dimensional inviscid flows with piecewise constant vorticity in a two-layer fluid with a flat bed and a free surface. We derive a Hamiltonian formulation for the nonlinear governing equations that is adequate for structure-preserving perturbations, at the linear and at the nonlinear level. Linear theory reveals some important features of the dynamics, highlighting differences between the short- and long-wave regimes. The fact that ocean energy is concentrated in the long-wave propagation modes motivates the pursuit of in-depth nonlinear analysis in the long-wave …


Multiscale Mathematical Modelling Of Nonlinear Nanowire Resonators For Biological Applications, Rosa Fallahpourghadikolaei Jan 2019

Multiscale Mathematical Modelling Of Nonlinear Nanowire Resonators For Biological Applications, Rosa Fallahpourghadikolaei

Theses and Dissertations (Comprehensive)

Nanoscale systems fabricated with low-dimensional nanostructures such as carbon nanotubes, nanowires, quantum dots, and more recently graphene sheets, have fascinated researchers from different fields due to their extraordinary and unique physical properties. For example, the remarkable mechanical properties of nanoresonators empower them to have a very high resonant frequency up to the order of giga to terahertz. The ultra-high frequency of these systems attracted the attention of researchers in the area of bio-sensing with the idea to implement them for detection of tiny bio-objects. In this thesis, we originally propose and analyze a mathematical model for nonlinear vibrations of nanowire …


Call For Abstracts - Resrb 2019, July 8-9, Wrocław, Poland, Wojciech M. Budzianowski Dec 2018

Call For Abstracts - Resrb 2019, July 8-9, Wrocław, Poland, Wojciech M. Budzianowski

Wojciech Budzianowski

No abstract provided.


Reduced Models Of Point Vortex Systems In Quasigeostrophic Fluid Dynamics, Jonathan Maack Jul 2018

Reduced Models Of Point Vortex Systems In Quasigeostrophic Fluid Dynamics, Jonathan Maack

Doctoral Dissertations

We develop a nonequilibrium statistical mechanical description of the evolution of point vortex systems governed by either the Euler, single-layer quasigeostrophic or two-layer quasigeostrophic equations. Our approach is based on a recently proposed optimal closure procedure for deriving reduced models of Hamiltonian systems. In this theory the statistical evolution is kept within a parametric family of distributions based on the resolved variables chosen to describe the macrostate of the system. The approximate evolution is matched as closely as possible to the true evolution by minimizing the mean-squared residual in the Liouville equation, a metric which quantifies the information loss rate …


Physical Applications Of The Geometric Minimum Action Method, George L. Poppe Jr. May 2018

Physical Applications Of The Geometric Minimum Action Method, George L. Poppe Jr.

Dissertations, Theses, and Capstone Projects

This thesis extends the landscape of rare events problems solved on stochastic systems by means of the \textit{geometric minimum action method} (gMAM). These include partial differential equations (PDEs) such as the real Ginzburg-Landau equation (RGLE), the linear Schroedinger equation, along with various forms of the nonlinear Schroedinger equation (NLSE) including an application towards an ultra-short pulse mode-locked laser system (MLL).

Additionally we develop analytical tools that can be used alongside numerics to validate those solutions. This includes the use of instanton methods in deriving state transitions for the linear Schroedinger equation and the cubic diffusive NLSE.

These analytical solutions are …


Real Solution Of Dae And Pdae System, Zahra Mohammadi, Greg Reid Mar 2018

Real Solution Of Dae And Pdae System, Zahra Mohammadi, Greg Reid

Western Research Forum

General systems of differential equations don't have restrictions on the number or type of equations. For example, they can be over or under-determined, and also contain algebraic constraints (e.g. algebraic equations such as in Differential-Algebraic equations (DAE) and Partial differential algebraic equations (PDAE). Increasingly such general systems arise from mathematical modeling of engineering and science problems such as in multibody mechanics, electrical circuit design, optimal control, chemical kinetics and chemical control systems. In most applications, only real solutions are of interest, rather than complex-valued solutions. Much progress has been made in exact differential elimination methods, which enable characterization of all …


Flow Anisotropy Due To Thread-Like Nanoparticle Agglomerations In Dilute Ferrofluids, Alexander Cali, Wah-Keat Lee, A. David Trubatch, Philip Yecko Dec 2017

Flow Anisotropy Due To Thread-Like Nanoparticle Agglomerations In Dilute Ferrofluids, Alexander Cali, Wah-Keat Lee, A. David Trubatch, Philip Yecko

Department of Applied Mathematics and Statistics Faculty Scholarship and Creative Works

Improved knowledge of the magnetic field dependent flow properties of nanoparticle-based magnetic fluids is critical to the design of biomedical applications, including drug delivery and cell sorting. To probe the rheology of ferrofluid on a sub-millimeter scale, we examine the paths of 550 μm diameter glass spheres falling due to gravity in dilute ferrofluid, imposing a uniform magnetic field at an angle with respect to the vertical. Visualization of the spheres’ trajectories is achieved using high resolution X-ray phase-contrast imaging, allowing measurement of a terminal velocity while simultaneously revealing the formation of an array of long thread-like accumulations of magnetic …


Examining The Electrical Excitation, Calcium Signaling, And Mechanical Contraction Cycle In A Heart Cell, Kristen Deetz, Nygel Foster, Darius Leftwich, Chad Meyer, Shalin Patel, Carlos Barajas, Matthias K. Gobbert, Zana Coulibaly Nov 2017

Examining The Electrical Excitation, Calcium Signaling, And Mechanical Contraction Cycle In A Heart Cell, Kristen Deetz, Nygel Foster, Darius Leftwich, Chad Meyer, Shalin Patel, Carlos Barajas, Matthias K. Gobbert, Zana Coulibaly

Spora: A Journal of Biomathematics

As the leading cause of death in the United States, heart disease has become a principal concern in modern society. Cardiac arrhythmias can be caused by a dysregulation of calcium dynamics in cardiomyocytes. Calcium dysregulation, however, is not yet fully understood and is not easily predicted; this provides motivation for the subsequent research. Excitation-contraction coupling (ECC) is the process through which cardiomyocytes undergo contraction from an action potential. Calcium induced calcium release (CICR) is the mechanism through which electrical excitation is coupled with mechanical contraction through calcium signaling. The study of the interplay between electrical excitation, calcium signaling, and mechanical …