Non-linear Dynamics Commons^™

Effect Of Recommending Users And Opinions On The Network Connectivity And Idea Generation Process, Sriniwas Pandey, Hiroki Sayama

Northeast Journal of Complex Systems (NEJCS)

The growing reliance on online services underscores the crucial role of recommendation systems, especially on social media platforms seeking increased user engagement. This study investigates how recommendation systems influence the impact of personal behavioral traits on social network dynamics. It explores the interplay between homophily, users’ openness to novel ideas, and recommendation-driven exposure to new opinions. Additionally, the research examines the impact of recommendation systems on the diversity of newly generated ideas, shedding light on the challenges and opportunities in designing effective systems that balance the exploration of new ideas with the risk of reinforcing biases or filtering valuable, unconventional …

Multiscale Modelling Of Brain Networks And The Analysis Of Dynamic Processes In Neurodegenerative Disorders, Hina Shaheen

Theses and Dissertations (Comprehensive)

The complex nature of the human brain, with its intricate organic structure and multiscale spatio-temporal characteristics ranging from synapses to the entire brain, presents a major obstacle in brain modelling. Capturing this complexity poses a significant challenge for researchers. The complex interplay of coupled multiphysics and biochemical activities within this intricate system shapes the brain's capacity, functioning within a structure-function relationship that necessitates a specific mathematical framework. Advanced mathematical modelling approaches that incorporate the coupling of brain networks and the analysis of dynamic processes are essential for advancing therapeutic strategies aimed at treating neurodegenerative diseases (NDDs), which afflict millions of …

Discontinuous Galerkin Methods For Compressible Miscible Displacements And Applications In Reservoir Simulation, Yue Kang

Dissertations, Master's Theses and Master's Reports

This dissertation contains research on discontinuous Galerkin (DG) methods applied to the system of compressible miscible displacements, which is widely adopted to model surfactant flooding in enhanced oil recovery (EOR) techniques. In most scenarios, DG methods can effectively simulate problems in miscible displacements.
However, if the problem setting is complex, the oscillations in the numerical results can be detrimental, with severe overshoots leading to nonphysical numerical approximations. The first way to address this issue is to apply the bound-preserving
technique. Therefore, we adopt a bound-preserving Discontinuous Galerkin method
with a Second-order Implicit Pressure Explicit Concentration (SIPEC) time marching
method to …

Reducing Food Scarcity: The Benefits Of Urban Farming, S.A. Claudell, Emilio Mejia

Journal of Nonprofit Innovation

Urban farming can enhance the lives of communities and help reduce food scarcity. This paper presents a conceptual prototype of an efficient urban farming community that can be scaled for a single apartment building or an entire community across all global geoeconomics regions, including densely populated cities and rural, developing towns and communities. When deployed in coordination with smart crop choices, local farm support, and efficient transportation then the result isn’t just sustainability, but also increasing fresh produce accessibility, optimizing nutritional value, eliminating the use of ‘forever chemicals’, reducing transportation costs, and fostering global environmental benefits.

Imagine Doris, who is …

Controlled Manipulation And Transport By Microswimmers In Stokes Flows, Jake Buzhardt

All Dissertations

Remotely actuated microscale swimming robots have the potential to revolutionize many aspects of biomedicine. However, for the longterm goals of this field of research to be achievable, it is necessary to develop modelling, simulation, and control strategies which effectively and efficiently account for not only the motion of individual swimmers, but also the complex interactions of such swimmers with their environment including other nearby swimmers, boundaries, other cargo and passive particles, and the fluid medium itself. The aim of this thesis is to study these problems in simulation from the perspective of controls and dynamical systems, with a particular focus …

Thermodynamic Laws Of Billiards-Like Microscopic Heat Conduction Models, Ling-Chen Bu

Doctoral Dissertations

In this thesis, we study the mathematical model of one-dimensional microscopic heat conduction of gas particles, applying both both analytical and numerical approaches. The macroscopic law of heat conduction is the renowned Fourier’s law J = −k∇T, where J is the local heat flux density, T(x, t) is the temperature gradient, and k is the thermal conductivity coefficient that characterizes the material’s ability to conduct heat. Though Fouriers’s law has been discovered since 1822, the thorough understanding of its microscopic mechanisms remains challenging [3] (2000). We assume that the microscopic model of heat conduction is a hard ball system. The …

Utilizing Non-Negative Least Squares For Data-Driven Discovery Of Dynamics, Tracey G. Oellerich

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Computational Modeling Using A Novel Continuum Approach Coupled With Pathway-Informed Neural Networks To Optimize Dynein-Mediated Centrosome Positioning In Polarized Cells, Arkaprovo Ghosal, Padmanabhan Seshaiyar Dr., Adriana Dawes Dr., General Genomics Inc.

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Modeling The Communication Dynamics In Human-Autonomy Teams: Insights From Search And Rescue Scenarios, Carlos E. Bustamante Orellana, Lucero Rodriguez Rodriguez, Yun Kang

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Rigid Body Constrained Motion Optimization And Control On Lie Groups And Their Tangent Bundles, Brennan S. Mccann

Doctoral Dissertations and Master's Theses

Rigid body motion requires formulations where rotational and translational motion are accounted for appropriately. Two Lie groups, the special orthogonal group SO(3) and the space of quaternions H, are commonly used to represent attitude. When considering rigid body pose, that is spacecraft position and attitude, the special Euclidean group SE(3) and the space of dual quaternions DH are frequently utilized. All these groups are Lie groups and Riemannian manifolds, and these identifications have profound implications for dynamics and controls. The trajectory optimization and optimal control problem on Riemannian manifolds presents significant opportunities for theoretical development. Riemannian optimization is an attractive …

Pathogen Emergence As Complex Biological Invasion: Lessons From Dynamical Systems Modeling, Sudam Surasinghe, Marisabel Rodriguez, Victor Meszaros, Jane Molofsky, Salvador Almagro-Moreno, Brandon Ogbunugafor

Northeast Journal of Complex Systems (NEJCS)

Infectious disease emergence has become the target of cross-disciplinary efforts
that aim to understand and predict the shape of outbreaks. The many challenges
involved with the prediction of disease emergence events is a characteristic that in-
fectious diseases share with biological invasions in many subfields of ecology (e.g.,
how certain plants are able to successfully invade a new niche). Like infectious
diseases, biological invasions by plants and animals involve interactions between
agents (pathogens and plants in their respective cases) and a recipient niche. In
this study, we examine the problem of pathogen emergence through the lens of a
framework first …

Temporality-Induced Chaos In The Kuramoto Model, Keanu Mason Rock, Hamza Dirie, Sean P. Cornelius

Northeast Journal of Complex Systems (NEJCS)

Switched dynamical systems have been extensively studied in engineering literature in the context of system control. In these systems, the dynamical laws change between different subsystems depending on the environment, a process that is known to produce emergent behaviors---notably chaos. These dynamics are analogous to those of temporal networks, in which the network topology changes over time, thereby altering the dynamics on the network. It stands to reason that temporal networks may therefore produce emergent chaos and other exotic behaviors unanticipated in static networks, yet concrete examples remain elusive. Here, we present a minimal example of a networked system in …

Modeling, Simulation And Control Of Microrobots For The Microfactory., Zhong Yang

Electronic Theses and Dissertations

Future assembly technologies will involve higher levels of automation in order to satisfy increased microscale or nanoscale precision requirements. Traditionally, assembly using a top-down robotic approach has been well-studied and applied to the microelectronics and MEMS industries, but less so in nanotechnology. With the boom of nanotechnology since the 1990s, newly designed products with new materials, coatings, and nanoparticles are gradually entering everyone’s lives, while the industry has grown into a billion-dollar volume worldwide. Traditionally, nanotechnology products are assembled using bottom-up methods, such as self-assembly, rather than top-down robotic assembly. This is due to considerations of volume handling of large …

The Magnetic Field Of Protostar-Disk-Outflow Systems, Mahmoud Sharkawi

Electronic Thesis and Dissertation Repository

Recent observations of protostellar cores reveal complex magnetic field configurations that are distorted in the innermost disk region. Unlike the prestellar phase, where the magnetic field geometry is simpler with an hourglass configuration, magnetic fields in the protostellar phase are sculpted by the formation of outflows and rapid rotation. This gives rise to a significant azimuthal (or toroidal) component that has not yet been analytically modelled in the literature. Moreover, the onset of outflows, which act as angular momentum transport mechanisms, have received considerable attention in the past few decades. Two mechanisms: 1) the driving by the gradient of a …

Fourth Order Dispersion In Nonlinear Media, Georgios Tsolias

Doctoral Dissertations

In recent years, there has been an explosion of interest in media bearing quartic
dispersion. After the experimental realization of so-called pure-quartic solitons, a
significant number of studies followed both for bright and for dark solitonic struc-
tures exploring the properties of not only quartic, but also setic, octic, decic etc.
dispersion, but also examining the competition between, e.g., quadratic and quartic
dispersion among others.
In the first chapter of this Thesis, we consider the interaction of solitary waves in
a model involving the well-known φ⁴ Klein-Gordon theory, bearing both Laplacian and biharmonic terms with different prefactors. As a …

Vibrations Reduction Of A Clamped- Clamped Micro-Beam Via Positive Position Feedback Controller, H. Mosaa, M. Kamel, H. El Gohry, L. S. Diab, H. M. Shawky

Al-Azhar Bulletin of Science

This manuscript displays the vibrations reduction of a clamped- clamped micro-beam subjected to an excitation external force via applying the positive position feedback (PPF) controller. The approximate solutions of the whole system are obtained up to the second order approximation with the help of the multiple scale perturbation technique (MSP). The Stability analysis is studied by utilizing the frequency response equations near the simultaneous condition .Time histories and response curves figures before and after control of the whole system are examined numerically using Rung-Kutta Fourth-order method (Maple(16) software and Matlab 7.7(R2014) software. Numerical results of the influences of different parameters …

Modeling Empirical Stock Market Behavior Using A Hybrid Agent-Based Dynamical Systems Model, Daniel A. Cline, Grant T. Aguinaldo, Christian Lemp

Northeast Journal of Complex Systems (NEJCS)

We describe the development and calibration of a hybrid agent-based dynamical systems model of the stock market that is capable of reproducing empirical market behavior. The model consists of two types of trader agents, fundamentalists and noise traders, as well as an opinion dynamic for the latter (optimistic vs. pessimistic). The trader agents switch types stochastically over time based on simple behavioral rules. A system of ordinary differential equations is used to model the stock price as a function of the states of the trader agents. We show that the model can reproduce key stylized facts (e.g., volatility clustering and …

A Novel Method For Sensitivity Analysis Of Time-Averaged Chaotic System Solutions, Christian A. Spencer-Coker

Theses and Dissertations

The direct and adjoint methods are to linearize the time-averaged solution of bounded dynamical systems about one or more design parameters. Hence, such methods are one way to obtain the gradient necessary in locally optimizing a dynamical system’s time-averaged behavior over those design parameters. However, when analyzing nonlinear systems whose solutions exhibit chaos, standard direct and adjoint sensitivity methods yield meaningless results due to time-local instability of the system. The present work proposes a new method of solving the direct and adjoint linear systems in time, then tests that method’s ability to solve instances of the Lorenz system that exhibit …

Representing And Analyzing The Dynamics Of An Agent-Based Adaptive Social Network Model With Partial Integro-Differential Equations, Hiroki Sayama

Northeast Journal of Complex Systems (NEJCS)

We formulated and analyzed a set of partial integro-differential equations that capture the dynamics of our adaptive network model of social fragmentation involving behavioral diversity of agents. Previous results showed that, if the agents’ cultural tolerance levels were diversified, the social network could remain connected while maintaining cultural diversity. Here we converted the original agent-based model into a continuous equation-based one so we can gain more theoretical insight into the model dynamics. We restricted the node states to 1-D continuous values and assumed the network size was very large. As a result, we represented the whole system as a set …

Bistability And Switching Behavior In Moving Animal Groups, Daniel Strömbom, Stephanie Nickerson, Catherine Futterman, Alyssa Difazio, Cameron Costello, Kolbjørn Tunstrøm

Northeast Journal of Complex Systems (NEJCS)

Moving animal groups such as schools of fish and flocks of birds frequently switch between different group structures. Standard models of collective motion have been used successfully to explain how stable groups form via local interactions between individuals, but they are typically unable to produce groups that exhibit spontaneous switching. We are only aware of one model, constructed for barred flagtail fish that are known to rely on alignment and attraction to organize their collective motion, that has been shown to generate this type of behavior in 2D (or 3D). Interestingly, another species of fish, golden shiners, do exhibit switching …

Role Of Inhibition And Spiking Variability In Ortho- And Retronasal Olfactory Processing, Michelle F. Craft

Theses and Dissertations

Odor perception is the impetus for important animal behaviors, most pertinently for feeding, but also for mating and communication. There are two predominate modes of odor processing: odors pass through the front of nose (ortho) while inhaling and sniffing, or through the rear (retro) during exhalation and while eating and drinking. Despite the importance of olfaction for an animal’s well-being and specifically that ortho and retro naturally occur, it is unknown whether the modality (ortho versus retro) is transmitted to cortical brain regions, which could significantly instruct how odors are processed. Prior imaging studies show different …

Symphas: A Modular Api For Phase-Field Modeling Using Compile-Time Symbolic Algebra, Steven A. Silber

Electronic Thesis and Dissertation Repository

The phase-field method is a common approach to qualitative analysis of phase transitions. It allows visualizing the time evolution of a phase transition, providing valuable insight into the underlying microstructure and the dynamical processes that take place. Although the approach is applied in a diverse range of fields, from metal-forming to cardiac modelling, there are a limited number of software tools available that allow simulating any phase-field problem and that are highly accessible. To address this, a new open source API and software package called SymPhas is developed for simulating phase-field and phase-field crystal in 1-, 2- and 3-dimensions. Phase-field …

Dynamic Parameter Estimation From Partial Observations Of The Lorenz System, Eunice Ng

Theses and Dissertations

Recent numerical work of Carlson-Hudson-Larios leverages a nudging-based algorithm for data assimilation to asymptotically recover viscosity in the 2D Navier-Stokes equations as partial observations on the velocity are received continuously-in-time. This "on-the-fly" algorithm is studied both analytically and numerically for the Lorenz equations in this thesis.

Computational Design Of Nonlinear Stress-Strain Of Isotropic Materials, Askhad M.Polatov, Akhmat M. Ikramov, Daniyarbek Razmukhamedov

Chemical Technology, Control and Management

The article deals with the problems of numerical modeling of nonlinear physical processes of the stress-strain state of structural elements. An elastoplastic medium of a homogeneous solid material is investigated. The results of computational experiments on the study of the process of physically nonlinear deformation of isotropic elements of three-dimensional structures with a system of one- and double-periodic spherical cavities under uniaxial compression are presented. The influence and mutual influence of stress concentrators in the form of spherical cavities, vertically located two cavities and a horizontally located system of two cavities on the deformation of the structure are investigated. Numerical …

Lecture 09: Hierarchically Low Rank And Kronecker Methods, Rio Yokota

Mathematical Sciences Spring Lecture Series

Exploiting structures of matrices goes beyond identifying their non-zero patterns. In many cases, dense full-rank matrices have low-rank submatrices that can be exploited to construct fast approximate algorithms. In other cases, dense matrices can be decomposed into Kronecker factors that are much smaller than the original matrix. Sparsity is a consequence of the connectivity of the underlying geometry (mesh, graph, interaction list, etc.), whereas the rank-deficiency of submatrices is closely related to the distance within this underlying geometry. For high dimensional geometry encountered in data science applications, the curse of dimensionality poses a challenge for rank-structured approaches. On the other …

Lecture 07: Nonlinear Preconditioning Methods And Applications, Xiao-Chuan Cai

Mathematical Sciences Spring Lecture Series

We consider solving system of nonlinear algebraic equations arising from the discretization of partial differential equations. Inexact Newton is a popular technique for such problems. When the nonlinearities in the system are well-balanced, Newton's method works well, but when a small number of nonlinear functions in the system are much more nonlinear than the others, Newton may converge slowly or even stagnate. In such a situation, we introduce some nonlinear preconditioners to balance the nonlinearities in the system. The preconditioners are often constructed using a combination of some domain decomposition methods and nonlinear elimination methods. For the nonlinearly preconditioned problem, …

Lecture 02: Tile Low-Rank Methods And Applications (W/Review), David Keyes

Mathematical Sciences Spring Lecture Series

As simulation and analytics enter the exascale era, numerical algorithms, particularly implicit solvers that couple vast numbers of degrees of freedom, must span a widening gap between ambitious applications and austere architectures to support them. We present fifteen universals for researchers in scalable solvers: imperatives from computer architecture that scalable solvers must respect, strategies towards achieving them that are currently well established, and additional strategies currently being developed for an effective and efficient exascale software ecosystem. We consider recent generalizations of what it means to “solve” a computational problem, which suggest that we have often been “oversolving” them at the …

Flocc: From Agent-Based Models To Interactive Simulations On The Web, Scott Donaldson

Northeast Journal of Complex Systems (NEJCS)

Agent-based modeling (ABM) is a computational technique wherein systems are represented through the actions and interactions of many individual entities (‘agents’) over time. ABM often attempts to elucidate the unpredictable, high-level behavior of systems through the predictable, low-level behavior of actors within the system. There are currently few software or frameworks for ABM that allow modelers to design and build interactive models on the web, for a wide audience as well as a scientifically literate audience well-versed in complexity, models, and simulations. Flocc is a novel framework for agent-based modeling written in JavaScript, the lingua franca programming language of the …

Emergent Hierarchy Through Conductance-Based Degree Constraints, Christopher Tyler Diggans, Jeremie Fish, Erik M. Bollt

Northeast Journal of Complex Systems (NEJCS)

The presence of hierarchy in many real-world networks is not yet fully understood. We observe that complex interaction networks are often coarse-grain models of vast modular networks, where tightly connected subgraphs are agglomerated into nodes for simplicity of representation and computational feasibility. The emergence of hierarchy in such growing complex networks may stem from one particular property of these ignored subgraphs: their graph conductance. Being a quantification of the main bottleneck of flow through the coarse-grain node, this scalar quantity implies a structural limitation and supports the consideration of heterogeneous degree constraints. The internal conductance values of the subgraphs are …

Are Terrorist Networks Just Glorified Criminal Cells?, Elie Alhajjar, Ryan Fameli, Shane Warren

Northeast Journal of Complex Systems (NEJCS)

The notions of organized crime and terrorism have an old and rich history around the globe. Researchers and practitioners have been studying events and phenomena related to these notions for a long time. There are pointers in the literature in which it is misleading to see the unfair comparison between terrorist and criminal networks with the argument that all actors involved in these networks are simply evil individuals. In this paper, we conduct a systematic study of the operational structure of such networks from a network science perspective. We highlight some of the major differences between them and support our …