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Mathematics Faculty Publications

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Full-Text Articles in Applied Mathematics

Enhancing Mathematical Models For Covid-19 Pandemic Response: A Philippine Study, Timothy Robin Teng, Elvira De Lara-Tuprio, Ma. Regina Justina Estuar, Christian Pulmano, Lu Christian S. Ong, Zachary Pangan, Lenard Paulo V. Tamayo, Jasper John V. Segismundo, Mark Anthony C. Tolentino, Alyssa Nicole N. Ty Dec 2024

Enhancing Mathematical Models For Covid-19 Pandemic Response: A Philippine Study, Timothy Robin Teng, Elvira De Lara-Tuprio, Ma. Regina Justina Estuar, Christian Pulmano, Lu Christian S. Ong, Zachary Pangan, Lenard Paulo V. Tamayo, Jasper John V. Segismundo, Mark Anthony C. Tolentino, Alyssa Nicole N. Ty

Mathematics Faculty Publications

Mathematical models supported by a robust automated data pipeline proved to be useful tools for a data-driven and science-based response and policy-making during the COVID-19 pandemic in the Philippines. In the first year of the pandemic, FASSSTER (Feasibility Analysis on Syndromic Surveillance using Spatio-Temporal Epidemiological modeleR) used a compartmental model to generate scenario-based projections of COVID-19 cases. The emergence of the Delta variant, however, and the administration of vaccines over the second half of 2021 caused significant changes in the Philippine pandemic landscape. This necessitated making adjustments to the model to better capture the local disease transmission dynamics and address …


Resonant Solutions Of The Non-Linear Schrödinger Equation With Periodic Potential, Arein Duaibes, Yulia Karpeshina Jul 2024

Resonant Solutions Of The Non-Linear Schrödinger Equation With Periodic Potential, Arein Duaibes, Yulia Karpeshina

Mathematics Faculty Publications

The goal is construction of stationary solutions close to non-trivial combinations of two plane waves at high energies for a periodic non-linear Schrödinger Equation in dimension two. The corresponding isoenergetic surface is described for any sufficiently large energy k2. It is shown that the isoenergetic surface corresponding to k2 is essentially different from that for the zero potential even for small potentials. We use a combination of the perturbative results obtained earlier for the linear case and a method of successive approximation.


How Generative Ai Models Such As Chatgpt Can Be (Mis)Used In Spc Practice, Education, And Research? An Exploratory Study, Fadel M. Megahed, Ying-Ju (Tessa) Chen, Joshua A. Ferris, Sven Knoth, L. Allison Jones-Farmer Apr 2024

How Generative Ai Models Such As Chatgpt Can Be (Mis)Used In Spc Practice, Education, And Research? An Exploratory Study, Fadel M. Megahed, Ying-Ju (Tessa) Chen, Joshua A. Ferris, Sven Knoth, L. Allison Jones-Farmer

Mathematics Faculty Publications

Generative Artificial Intelligence (AI) models such as OpenAI's ChatGPT have the potential to revolutionize Statistical Process Control (SPC) practice, learning, and research. However, these tools are in the early stages of development and can be easily misused or misunderstood. In this paper, we give an overview of the development of Generative AI. Specifically, we explore ChatGPT's ability to provide code, explain basic concepts, and create knowledge related to SPC practice, learning, and research. By investigating responses to structured prompts, we highlight the benefits and limitations of the results. Our study indicates that the current version of ChatGPT performs well for …


Cognitive Load Scale In Learning Formal Definition Of Limit: A Rasch Model Approach, Rina Oktaviyanthi, Ria Noviana Agus, Mark Lester B. Garcia, Kornkanok Lertdechapat Feb 2024

Cognitive Load Scale In Learning Formal Definition Of Limit: A Rasch Model Approach, Rina Oktaviyanthi, Ria Noviana Agus, Mark Lester B. Garcia, Kornkanok Lertdechapat

Mathematics Faculty Publications

Constructing proofs for the limit using the formal definition induces a high cognitive load. Common assessment tools, like cognitive load scales, lack specificity for the concept of limits. This research aims to validate an instrument tailored to assess cognitive load in students focused on the formal definition of limits, addressing the need for diverse strategies in education. The research employs a quantitative survey design with a Rasch model approach, utilizing a data collection instrument in the form of a questionnaire. Subsequently, the data are analyzed by focusing on three aspects: (1) item fit to the Rasch model, (2) unidimensionality, and …


Covid-19 Collaborative Modelling For Policy Response In The Philippines, Malaysia And Vietnam, Angus Hughes, Romain Ragonnet, Pavithra Jayasundara, Hoang-Anh Ngo, Elvira P. De Lara-Tuprio, Ma. Regina Justina Estuar, Timothy Robin Y. Teng, Law Kian Boon, Kalaiarasu M. Peariasamy, Zhuo-Lin Chong, Izzuna Mudla M. Ghazali, Greg J. Fox, Thu-Anh Nguyen, Linh-Vi Le, Milinda Abayawardana B. Eng, David Shipman, Emma S. Mcbryde, Michael T. Meehan, Jamie M. Caldwell, James M. Trauer Jan 2022

Covid-19 Collaborative Modelling For Policy Response In The Philippines, Malaysia And Vietnam, Angus Hughes, Romain Ragonnet, Pavithra Jayasundara, Hoang-Anh Ngo, Elvira P. De Lara-Tuprio, Ma. Regina Justina Estuar, Timothy Robin Y. Teng, Law Kian Boon, Kalaiarasu M. Peariasamy, Zhuo-Lin Chong, Izzuna Mudla M. Ghazali, Greg J. Fox, Thu-Anh Nguyen, Linh-Vi Le, Milinda Abayawardana B. Eng, David Shipman, Emma S. Mcbryde, Michael T. Meehan, Jamie M. Caldwell, James M. Trauer

Mathematics Faculty Publications

Mathematical models that capture COVID-19 dynamics have supported public health responses and policy development since the beginning of the pandemic, yet there is limited discourse to describe features of an optimal modelling platform to support policy decisions or how modellers and policy makers have engaged with each other. Here, we outline how we used a modelling software platform to support public health decision making for the COVID-19 response in the Western Pacific Region (WPR) countries of the Philippines, Malaysia and Viet Nam. This perspective describes an approach to support evidence-based public health decisions and policy, which may help inform other …


Understanding Covid-19 Dynamics And The Effects Of Interventions In The Philippines: A Mathematical Modelling Study, Jamie M. Caldwell, Elvira P. De Lara-Tuprio, Timothy Robin Y. Teng, Ma. Regina Justina E. Estuar, Raymond Francis R. Sarmiento, Milinda Abayawardana B. Eng, Robert Neil F. Leong, Richard T. Gray, James G. Wood, Linh-Vi Le, Emma S. Mcbryde, Romain Ragonnet, James M. Trauer Jul 2021

Understanding Covid-19 Dynamics And The Effects Of Interventions In The Philippines: A Mathematical Modelling Study, Jamie M. Caldwell, Elvira P. De Lara-Tuprio, Timothy Robin Y. Teng, Ma. Regina Justina E. Estuar, Raymond Francis R. Sarmiento, Milinda Abayawardana B. Eng, Robert Neil F. Leong, Richard T. Gray, James G. Wood, Linh-Vi Le, Emma S. Mcbryde, Romain Ragonnet, James M. Trauer

Mathematics Faculty Publications

Background

COVID-19 initially caused less severe outbreaks in many low- and middle-income countries (LMIC) compared with many high-income countries; possibly because of differing demographics; socioeconomics; surveillance; and policy responses. Here; we investigate the role of multiple factors on COVID-19 dynamics in the Philippines; a LMIC that has had a relatively severe COVID-19 outbreak.

Methods

We applied an age-structured compartmental model that incorporated time-varying mobility; testing; and personal protective behaviors (through a “Minimum Health Standards” policy; MHS) to represent the first wave of the Philippines COVID-19 epidemic nationally and for three highly affected regions (Calabarzon; Central Visayas; and the National Capital …


Dpp: Deep Predictor For Price Movement From Candlestick Charts, Chih-Chieh Hung, Ying-Ju (Tessa) Chen Jun 2021

Dpp: Deep Predictor For Price Movement From Candlestick Charts, Chih-Chieh Hung, Ying-Ju (Tessa) Chen

Mathematics Faculty Publications

Forecasting the stock market prices is complicated and challenging since the price movement is affected by many factors such as releasing market news about earnings and profits, international and domestic economic situation, political events, monetary policy, major abrupt affairs, etc. In this work, a novel framework: deep predictor for price movement (DPP) using candlestick charts in the stock historical data is proposed. This framework comprises three steps: 1. decomposing a given candlestick chart into sub-charts; 2. using CNN-autoencoder to acquire the best representation of sub-charts; 3. applying RNN to predict the price movements from a collection of sub-chart representations. An …


Optimal Tile-Based Dna Self-Assembly Designs For Lattice Graphs And Platonic Solids, Leyda Almodovar, Joanna Ellis-Monaghan, Amanda Harsy, Cory Johnson, Jessica Sorrells Jan 2021

Optimal Tile-Based Dna Self-Assembly Designs For Lattice Graphs And Platonic Solids, Leyda Almodovar, Joanna Ellis-Monaghan, Amanda Harsy, Cory Johnson, Jessica Sorrells

Mathematics Faculty Publications

A design goal in self-assembly of DNA nanostructures is to find minimal sets of branched junction molecules that will self-assemble into targeted structures. This process can be modeled using techniques from graph theory. This paper is a collection of proofs for a set of DNA complexes which can be represented by specific graphs, namely Platonic solids, square lattice graphs, and triangular lattice graphs. This work supplements the results presented in https://arxiv.org/abs/2108.00035


Impact Of Vaccine Supplies And Delays On Optimal Control Of The Covid-19 Pandemic: Mapping Interventions For The Philippines, Carlo Delfin S. Estadilla, Joshua Uyheng, Elvira P. De Lara-Tuprio, Timothy Robin Y. Teng, Jay Michael R. Macalalag, Ma. Regina Justina E. Estuar Jan 2021

Impact Of Vaccine Supplies And Delays On Optimal Control Of The Covid-19 Pandemic: Mapping Interventions For The Philippines, Carlo Delfin S. Estadilla, Joshua Uyheng, Elvira P. De Lara-Tuprio, Timothy Robin Y. Teng, Jay Michael R. Macalalag, Ma. Regina Justina E. Estuar

Mathematics Faculty Publications

Background

Around the world, controlling the COVID-19 pandemic requires national coordination of multiple intervention strategies. As vaccinations are globally introduced into the repertoire of available interventions, it is important to consider how changes in the local supply of vaccines, including delays in administration, may be addressed through existing policy levers. This study aims to identify the optimal level of interventions for COVID-19 from 2021 to 2022 in the Philippines, which as a developing country is particularly vulnerable to shifting assumptions around vaccine availability. Furthermore, we explore optimal strategies in scenarios featuring delays in vaccine administration, expansions of vaccine supply, and …


Global Analysis Of The Shadow Gierer-Meinhardt System With General Linear Boundary Conditions In A Random Environment, Kwadwo Antwi-Fordjour, Seonguk Kim, Marius Nkashama Oct 2020

Global Analysis Of The Shadow Gierer-Meinhardt System With General Linear Boundary Conditions In A Random Environment, Kwadwo Antwi-Fordjour, Seonguk Kim, Marius Nkashama

Mathematics Faculty Publications

The global analysis of the shadow Gierer-Meinhardt system with multiplicative white noise and general linear boundary conditions is investigated in this paper. For this reaction-diffusion system, we employ a fixed point argument to prove local existence and uniqueness. Our results on global existence are based on a priori estimates of solutions.


Quasilinearization Applied To Boundary Value Problems At Resonance For Riemann-Liouville Fractional Differential Equations, Paul W. Eloe, Jaganmohan Jonnalagadda Oct 2020

Quasilinearization Applied To Boundary Value Problems At Resonance For Riemann-Liouville Fractional Differential Equations, Paul W. Eloe, Jaganmohan Jonnalagadda

Mathematics Faculty Publications

The quasilinearization method is applied to a boundary value problem at resonance for a Riemann-Liouville fractional differential equation. Under suitable hypotheses, the method of upper and lower solutions is employed to establish uniqueness of solutions. A shift method, coupled with the method of upper and lower solutions, is applied to establish existence of solutions. The quasilinearization algorithm is then applied to obtain sequences of lower and upper solutions that converge monotonically and quadratically to the unique solution of the boundary value problem at resonance.


A Data Analytic Framework For Physical Fatigue Management Using Wearable Sensors, Zahra Sedighi Maman, Ying-Ju Chen, Amir Baghdadi, Seamus Lombardo, Lora A. Cavuoto, Fadel M. Megahed Oct 2020

A Data Analytic Framework For Physical Fatigue Management Using Wearable Sensors, Zahra Sedighi Maman, Ying-Ju Chen, Amir Baghdadi, Seamus Lombardo, Lora A. Cavuoto, Fadel M. Megahed

Mathematics Faculty Publications

The use of expert systems in optimizing and transforming human performance has been limited in practice due to the lack of understanding of how an individual's performance deteriorates with fatigue accumulation, which can vary based on both the worker and the workplace conditions. As a first step toward realizing the human-centered approach to artificial intelligence and expert systems, this paper lays the foundation for a data analytic approach to managing fatigue in physically-demanding workplaces. The proposed framework capitalizes on continuously collected human performance data from wearable sensor technologies, and is centered around four distinct phases of fatigue: (a) detection, where …


A Two-Stage Machine Learning Framework To Predict Heart Transplantation Survival Probabilities Over Time With A Monotonic Probability Constraint, Hamidreza Ahady Dolatsaraa, Ying-Ju (Tessa) Chen, Christy Evans, Ashish Gupta, Fadel M. Megahed Oct 2020

A Two-Stage Machine Learning Framework To Predict Heart Transplantation Survival Probabilities Over Time With A Monotonic Probability Constraint, Hamidreza Ahady Dolatsaraa, Ying-Ju (Tessa) Chen, Christy Evans, Ashish Gupta, Fadel M. Megahed

Mathematics Faculty Publications

The overarching goal of this paper is to develop a modeling framework that can be used to obtain personalized, data-driven and monotonically constrained probability curves. This research is motivated by the important problem of improving the predictions for organ transplantation outcomes, which can inform updates made to organ allocation protocols, post-transplantation care pathways, and clinical resource utilization. In pursuit of our overarching goal and motivating problem, we propose a novel two-stage machine learning-based framework for obtaining monotonic probabilities over time. The first stage uses the standard approach of using independent machine learning models to predict transplantation outcomes for each time-period …


The N-Integral, Abraham P. Racca, Emmanuel A. Cabral Jan 2020

The N-Integral, Abraham P. Racca, Emmanuel A. Cabral

Mathematics Faculty Publications

In this paper, we introduced a Henstock-type integral named $N$-integral of a real valued function $f$ on a closed and bounded interval $[a,b]$. The $N$-integrable functions lie entirely between Riemann integrable functions and Henstock integrable functions. It was shown that for a Henstock integrable function $f$ on $[a,b]$ the following are equivalent: \begin{enumerate} \item[$(1)$] The function $f$ is $N$-integrable; \item[$(2)$] There exists a null set $S$ for which given $\epsilon >0$ there exists a gauge $\delta$ such that for any $\delta$-fine partial division $D=\{(\xi,[u,v])\}$ of $[a,b]$ we have \[(\phi_S(D)\cap \Gamma_{\epsilon})\sum |f(v)-f(u)||v-u|<\epsilon\] where $\phi_S(D)=\{(\xi,[u,v])\in D:\xi \notin S\}$ and \[\Gamma_{\epsilon}=\{(\xi,[u,v]): |f(v)-f(u)|\geq \epsilon\}\] \end{enumerate} and \begin{enumerate} \item[$(3)$] The function $f$ is continuous almost everywhere. \end{enumerate} A characterization of continuous almost everywhere functions was also given.


Stochastic Technique For Solutions Of Non-Linear Fin Equation Arising In Thermal Equilibrium Model, Iftikhar Ahmad, Hina Qureshi, Muhammad Bilal, Muhammad Usman Jan 2020

Stochastic Technique For Solutions Of Non-Linear Fin Equation Arising In Thermal Equilibrium Model, Iftikhar Ahmad, Hina Qureshi, Muhammad Bilal, Muhammad Usman

Mathematics Faculty Publications

In this study, a stochastic numerical technique is used to investigate the numerical solution of heat transfer temperature distribution system using feed forward artificial neural networks. Mathematical model of fin equation is formulated with the help of artificial neural networks. The effect of the heat on a rectangular fin with thermal conductivity and temperature de-pendent internal heat generation is calculated through neural networks optimization with optimizers like active set technique, interior point technique, pattern search, genetic algorithm and a hybrid approach of pattern search - interior point technique, genetic algorithm - active set technique, genetic algorithm - interior point technique, …


Three Point Boundary Value Problems For Ordinary Differential Equations, Uniqueness Implies Existence, Paul W. Eloe, Johnny Henderson, Jeffrey T. Neugebauer Jan 2020

Three Point Boundary Value Problems For Ordinary Differential Equations, Uniqueness Implies Existence, Paul W. Eloe, Johnny Henderson, Jeffrey T. Neugebauer

Mathematics Faculty Publications

We consider a family of three point n − 2, 1, 1 conjugate boundary value problems for nth order nonlinear ordinary differential equations and obtain conditions in terms of uniqueness of solutions imply existence of solutions. A standard hypothesis that has proved effective in uniqueness implies existence type results is to assume uniqueness of solutions of a large family of n−point boundary value problems. Here, we replace that standard hypothesis with one in which we assume uniqueness of solutions of large families of two and three point boundary value problems. We then close the paper with verifiable conditions on the …


Quasilinearization And Boundary Value Problems At Resonance, Kareem Alanazi, Meshal Alshammari, Paul W. Eloe Oct 2019

Quasilinearization And Boundary Value Problems At Resonance, Kareem Alanazi, Meshal Alshammari, Paul W. Eloe

Mathematics Faculty Publications

A quasilinearization algorithm is developed for boundary value problems at resonance. To do so, a standard monotonicity condition is assumed to obtain the uniqueness of solutions for the boundary value problem at resonance. Then the method of upper and lower solutions and the shift method are applied to obtain the existence of solutions. A quasilinearization algorithm is developed and sequences of approximate solutions are constructed, which converge monotonically and quadratically to the unique solution of the boundary value problem at resonance. Two examples are provided in which explicit upper and lower solutions are exhibited.


Mittag–Leffler Stability Of Systems Of Fractional Nabla Difference Equations, Paul W. Eloe, Jaganmohan Jonnalagadda Jul 2019

Mittag–Leffler Stability Of Systems Of Fractional Nabla Difference Equations, Paul W. Eloe, Jaganmohan Jonnalagadda

Mathematics Faculty Publications

Mittag-Leffler stability of nonlinear fractional nabla difference systems is defined and the Lyapunov direct method is employed to provide sufficient conditions for Mittag-Leffler stability of, and in some cases the stability of, the zero solution of a system nonlinear fractional nabla difference equations. For this purpose, we obtain several properties of the exponential and one parameter Mittag-Leffler functions of fractional nabla calculus. Two examples are provided to illustrate the applicability of established results.


Comparison Of Green's Functions For A Family Of Boundary Value Problems For Fractional Difference Equations, Paul W. Eloe, Catherine Kublik, Jeffrey T. Neugebauer Jan 2019

Comparison Of Green's Functions For A Family Of Boundary Value Problems For Fractional Difference Equations, Paul W. Eloe, Catherine Kublik, Jeffrey T. Neugebauer

Mathematics Faculty Publications

In this paper, we obtain sign conditions and comparison theorems for Green's functions of a family of boundary value problems for a Riemann-Liouville type delta fractional difference equation. Moreover, we show that as the length of the domain diverges to infinity, each Green's function converges to a uniquely defined Green's function of a singular boundary value problem.


Quasilinearization And Boundary Value Problems At Resonance For Caputo Fractional Differential Equations, Saleh S. Almuthaybiri, Paul W. Eloe, Jeffrey T. Neugebauer Jan 2019

Quasilinearization And Boundary Value Problems At Resonance For Caputo Fractional Differential Equations, Saleh S. Almuthaybiri, Paul W. Eloe, Jeffrey T. Neugebauer

Mathematics Faculty Publications

The quasilinearization method is applied to a boundary value problem at resonance for a Caputo fractional differential equation. The method of upper and lower solutions is first employed to obtain the uniqueness of solutions of the boundary value problem at resonance. The shift argument is applied to show the existence of solutions. The quasilinearization algorithm is then developed and sequences of approximate solutions are constructed that converge monotonically and quadratically to the unique solution of the boundary value problem at resonance. Two applications are provided to illustrate the main results.


Quasilinearization And Boundary Value Problems For Riemann-Liouville Fractional Differential Equations, Paul W. Eloe, Jaganmohan Jonnalagadda Jan 2019

Quasilinearization And Boundary Value Problems For Riemann-Liouville Fractional Differential Equations, Paul W. Eloe, Jaganmohan Jonnalagadda

Mathematics Faculty Publications

We apply the quasilinearization method to a Dirichlet boundary value problem and to a right focal boundary value problem for a RiemannLiouville fractional differential equation. First, we sue the method of upper and lower solutions to obtain the uniqueness of solutions of the Dirichlet boundary value problem. Next, we apply a suitable fixed point theorem to establish the existence of solutions. We develop a quasilinearization algorithm and construct sequences of approximate solutions that converge monotonically and quadratically to the unique solution of the boundary value problem. Two examples are exhibited to illustrate the main result for the Dirichlet boundary value …


The Large Contraction Principle And Existence Of Periodic Solutions For Infinite Delay Volterra Difference Equations, Paul W. Eloe, Jaganmohan Jonnalagadda, Youssef Raffoul Jan 2019

The Large Contraction Principle And Existence Of Periodic Solutions For Infinite Delay Volterra Difference Equations, Paul W. Eloe, Jaganmohan Jonnalagadda, Youssef Raffoul

Mathematics Faculty Publications

In this article, we establish sufficient conditions for the existence of periodic solutions of a nonlinear infinite delay Volterra difference equation. (See paper for equation.)

We employ a Krasnosel’skii type fixed point theorem, originally proved by Burton. The primary sufficient condition is not verifiable in terms of the parameters of the difference equation, and so we provide three applications in which the primary sufficient condition is verified.


Avery Fixed Point Theorem Applied To A Hammerstein Integral Equation, Paul W. Eloe, Jeffrey T. Neugebauer Jan 2019

Avery Fixed Point Theorem Applied To A Hammerstein Integral Equation, Paul W. Eloe, Jeffrey T. Neugebauer

Mathematics Faculty Publications

Abstract. We apply a recent Avery et al. fixed point theorem to the Hammerstein integral equation (see paper for equation). Under certain conditions on G, we show the existence of positive and positive symmetric solutions. Examples are given where G is a convolution kernel and where G is a Green’s function associated with different boundary-value problem.


Concavity In Fractional Calculus, Paul W. Eloe, Jeffrey T. Neugebauer Jan 2018

Concavity In Fractional Calculus, Paul W. Eloe, Jeffrey T. Neugebauer

Mathematics Faculty Publications

No abstract provided.


When Numerical Analysis Crosses Paths With Catalan And Generalized Motzkin Numbers, Paul W. Eloe, Catherine Kublik Jan 2018

When Numerical Analysis Crosses Paths With Catalan And Generalized Motzkin Numbers, Paul W. Eloe, Catherine Kublik

Mathematics Faculty Publications

We study a linear doubly indexed sequence that contains the Catalan numbers and relates to a class of generalized Motzkin numbers. We obtain a closed form formula, a generating function and a nonlinear recursion relation for this sequence. We show that a finite difference scheme with compact stencil applied to a nonlinear differential operator acting on the Euclidean distance function is exact, and exploit this exactness to produce the nonlinear recursion relation. In particular, the nonlinear recurrence relation is obtained by using standard error analysis techniques from numerical analysis. This work shows a connection between numerical analysis and number theory, …


Height Transitions, Shape Evolution, And Coarsening Of Equilibrating Quantum Nanoislands, Mikhail Khenner Oct 2017

Height Transitions, Shape Evolution, And Coarsening Of Equilibrating Quantum Nanoislands, Mikhail Khenner

Mathematics Faculty Publications

No abstract provided.


Interplay Of Quantum Size Effect, Anisotropy And Surface Stress Shapes The Instability Of Thin Metal Films, Mikhail Khenner Aug 2017

Interplay Of Quantum Size Effect, Anisotropy And Surface Stress Shapes The Instability Of Thin Metal Films, Mikhail Khenner

Mathematics Faculty Publications

Morphological instability of a planar surface ([111], [011], or [001]) of an ultra-thin metal film is studied in a parameter space formed by three major effects (the quantum size effect, the surface energy anisotropy and the surface stress) that influence a film dewetting. The analysis is based on the extended Mullins equation, where the effects are cast as functions of the film thickness. The formulation of the quantum size effect (Z. Zhang et al., PRL 80, 5381 (1998)) includes the oscillation of the surface energy with thickness caused by electrons confinement. By systematically comparing the effects, their contributions into the …


Density-Dependent Leslie Matrix Modeling For Logistic Populations With Steady-State Distribution Control, Bruce Kessler, Andrew Davis Dec 2016

Density-Dependent Leslie Matrix Modeling For Logistic Populations With Steady-State Distribution Control, Bruce Kessler, Andrew Davis

Mathematics Faculty Publications

The Leslie matrix model allows for the discrete modeling of population age-groups whose total population grows exponentially. Many attempts have been made to adapt this model to a logistic model with a carrying capacity (see [1], [2], [4], [5], and [6]), with mixed results. In this paper we provide a new model for logistic populations that tracks age-group populations with repeated multiplication of a density-dependent matrix constructed from an original Leslie matrix, the chosen carrying capacity of the model, and the desired steady-state age-group distribution. The total populations from the model converge to a discrete logistic model with the same …


Integration Over Curves And Surfaces Defined By The Closest Point Mapping, Catherine Kublik, Richard Tsai Dec 2016

Integration Over Curves And Surfaces Defined By The Closest Point Mapping, Catherine Kublik, Richard Tsai

Mathematics Faculty Publications

We propose a new formulation for integrating over smooth curves and surfaces that are described by their closest point mappings. Our method is designed for curves and surfaces that are not defined by any explicit parameterization and is intended to be used in combination with level set techniques. However, contrary to the common practice with level set methods, the volume integrals derived from our formulation coincide exactly with the surface or line integrals that one wishes to compute. We study various aspects of this formulation and provide a geometric interpretation of this formulation in terms of the singular values of …


Effects Of Cell Cycle Noise On Excitable Gene Circuits, Alan Veliz-Cuba, Chinmaya Gupta, Matthew R. Bennett, Krešimir Josić, William Ott Nov 2016

Effects Of Cell Cycle Noise On Excitable Gene Circuits, Alan Veliz-Cuba, Chinmaya Gupta, Matthew R. Bennett, Krešimir Josić, William Ott

Mathematics Faculty Publications

We assess the impact of cell cycle noise on gene circuit dynamics. For bistable genetic switches and excitable circuits, we find that transitions between metastable states most likely occur just after cell division and that this concentration effect intensifies in the presence of transcriptional delay. We explain this concentration effect with a three-states stochastic model. For genetic oscillators, we quantify the temporal correlations between daughter cells induced by cell division. Temporal correlations must be captured properly in order to accurately quantify noise sources within gene networks.