Physical Sciences and Mathematics Commons^™

An Analytical Model Of Motion Artifacts In A Measured Arterial Pulse Signal—Part I: Accelerometers And Ppg Sensors, Md Mahfuzur Rahman, Subodh Toraskar, Mamun Hasan, Zhili Hao

Mechanical & Aerospace Engineering Faculty Publications

This paper, the first of two parts, presents an analytical model of motion artifacts (MAs) in measured pulse signals by accelerometers and photoplethysmography (PPG) sensors. As the transmission path from the true pulse signal in an artery to the sensor output (measured pulse signal), the tissue-contact-sensor (TCS) stack is modeled as a 1DOF (degree-of-freedom) system. MAs cause baseline drift of the mass and simultaneously time-varying system parameters (TVSPs) of the TCS stack. With arterial wall displacement and pulsatile pressure serving separately as the true pulse signal, an analytical model is developed to mathematically relate baseline drift and TVSP to a …

Motion Artifacts Removal From Measured Arterial Pulse Signals At Rest: A Generalized Sdof-Model-Based Time-Frequency Method, Zhili Hao

Mechanical & Aerospace Engineering Faculty Publications

Motion artifacts (MA) are a key factor affecting the accuracy of a measured arterial pulse signal at rest. This paper presents a generalized time–frequency method for MA removal that is built upon a single-degree-of-freedom (SDOF) model of MA, where MA is manifested as time-varying system parameters (TVSPs) of the SDOF system for the tissue–contact-sensor (TCS) stack between an artery and a sensor. This model distinguishes the effects of MA and respiration on the instant parameters of harmonics in a measured pulse signal. Accordingly, a generalized SDOF-model-based time–frequency (SDOF-TF) method is developed to obtain the instant parameters of each harmonic in …

Faithful Narratives From Complex Conceptual Models: Should Modelers Or Large Language Models Simplify Causal Maps, Tyler J. Gandee, Philippe J. Giabbanelli

VMASC Publications

(1) Background: Comprehensive conceptual models can result in complex artifacts, consisting of many concepts that interact through multiple mechanisms. This complexity can be acceptable and even expected when generating rich models, for instance to support ensuing analyses that find central concepts or decompose models into parts that can be managed by different actors. However, complexity can become a barrier when the conceptual model is used directly by individuals. A ‘transparent’ model can support learning among stakeholders (e.g., in group model building) and it can motivate the adoption of specific interventions (i.e., using a model as evidence base). Although advances in …

Algotric: Symmetric And Asymmetric Encryption Algorithms For Cryptography – A Comparative Analysis In Ai Era, Naresh Kshetri, Mir Mehedi Rahman, Md Masud Rana, Omar Faruq Osama, James Hutson

Faculty Scholarship

The increasing integration of artificial intelligence (AI) within cybersecurity has necessitated stronger encryption methods to ensure data security. This paper presents a comparative analysis of symmetric (SE) and asymmetric encryption (AE) algorithms, focusing on their role in securing sensitive information in AI-driven environments. Through an in-depth study of various encryption algorithms such as AES, RSA, and others, this research evaluates the efficiency, complexity, and security of these algorithms within modern cybersecurity frameworks. Utilizing both qualitative and quantitative analysis, this research explores the historical evolution of encryption algorithms and their growing relevance in AI applications. The comparison of SE and AE …

Comparing And Evaluating Models Of Tile-Assembly Using Intrinsic Simulation, Daniel Hader

Graduate Theses and Dissertations

Tile-assembly studies abstract models of computation inspired by advancements in the emerging field of DNA-nanotechnology, where synthetic strands of DNA are used as building blocks for microscopic structures. These DNA strands can be made to combine into structural units with selectively sticky sides that abstractly resemble Wang tiles. However, unlike Wang tiles, an assembly process is modeled where tiles combine one-by-one to form larger assemblies according to matching rules based on their sticky sides. While in practice, these tile-assembly models have seen use in designing DNA nano-structures, the mathematical study of their theory has revealed an exciting interplay between geometric …

A Novel Phenotype Imputation Method With Copula Model, Jianjun Zhang, Jane Zizhen Zhao, Samantha Gonzales, Xuexia Wang, Qiuying Sha

Michigan Tech Publications

BACKGROUND: Jointly analyzing multiple phenotype/traits may increase power in genetic association studies by aggregating weak genetic effects. The chance that at least one phenotype is missing increases exponentially as the number of phenotype increases especially for a real dataset. It is a common practice to discard individuals with missing phenotype or phenotype with a large proportion of missing values. Such a discarding method may lead to a loss of power or even an insufficient sample size for analysis. To our knowledge, many existing phenotype imputing methods are built on multivariate normal assumptions for analysis. Violation of these assumptions may lead …

De-Identification Is Not Enough: A Comparison Between De-Identified And Synthetic Clinical Notes, Atiquer Rahman Sarkar, Yao-Shun Chuang, Noman Mohammed, Xiaoqian Jiang

Faculty, Staff and Student Publications

For sharing privacy-sensitive data, de-identification is commonly regarded as adequate for safeguarding privacy. Synthetic data is also being considered as a privacy-preserving alternative. Recent successes with numerical and tabular data generative models and the breakthroughs in large generative language models raise the question of whether synthetically generated clinical notes could be a viable alternative to real notes for research purposes. In this work, we demonstrated that (i) de-identification of real clinical notes does not protect records against a membership inference attack, (ii) proposed a novel approach to generate synthetic clinical notes using the current state-of-the-art large language models, (iii) evaluated …

A Large Scale Multi Institutional Study For Radiomics Driven Machine Learning For Meningioma Grading, Mert Karabacak, Shiv Patil, Rui Feng, Raj K. Shrivastava, Konstantinos Margetis

Department of Medicine Faculty Papers

This study aims to develop and evaluate radiomics-based machine learning (ML) models for predicting meningioma grades using multiparametric magnetic resonance imaging (MRI). The study utilized the BraTS-MEN dataset's training split, including 698 patients (524 with grade 1 and 174 with grade 2-3 meningiomas). We extracted 4872 radiomic features from T1, T1 with contrast, T2, and FLAIR MRI sequences using PyRadiomics. LASSO regression reduced features to 176. The data was split into training (60%), validation (20%), and test (20%) sets. Five ML algorithms (TabPFN, XGBoost, LightGBM, CatBoost, and Random Forest) were employed to build models differentiating low-grade (grade 1) from high-grade …

Visual Parsing Algorithms For An Equitable Augmented Reality Learning System, Pushpita Saha '25, Matthew L. Furber Mfa, Paul W. Bible

Annual Student Research Poster Session

Giving instructions for a character to navigate around a scene provides a simple analog for the planning needed in computer programming. While many children’s navigation games exist, most require the child to use a combination of input devices such as keyboard, mouse, and controllers for play. Children under the age of five may struggle to use a mouse, but they can easily construct the plans needed for such a game. This research explores layout and graph connectivity algorithms to connect tactile game pieces for a navigation game. A web camera identifies the position of action cards and numerical modifiers (card: …

A Primer On How Al Algorithms Control You, Russell Fulmer

Journal of Technology in Counselor Education and Supervision

Artificial intelligence (AI) algorithms can control you by exerting heavy influence on your worldview. Your worldview is akin to your personal philosophy, which affects how you perceive and label social systems and structures, groups of people, and politics. Algorithms impact your decision-making, beliefs, mood, relationships, and more. My rhetoric is intentionally strong when discussing algorithms, and I invite you to assess its merit by reviewing related literature and thinking critically.

7th International Conference On Creative Mathematical Sciences Communication (Cmsc`24), Frances A. Rosamond

Journal of Humanistic Mathematics

The 7th International Creative Mathematical Sciences Communication (CMSC) conference is scheduled for October 2024 in Trier, Germany. Initiated in Darwin, Australia in 2013, CMSC aims to explore novel methods of imparting computational thinking to diverse audiences including non-specialists, modern citizens, and children. Participants from around the world and from various and interdisciplinary disciplines such as science, education, dance, drama, and visual arts convene to exchange ideas, present experimental approaches, and collaborate on engaging children in the exploration of ongoing, unresolved research challenges.

A Feasibility-Preserved Quantum Approximate Solver For The Capacitated Vehicle Routing Problem, Ningyi Xie, Xinwei Lee, Dongsheng Cai, Yoshiyuki Saito, Nobuyoshi Asai, Hoong Chuin Lau

Research Collection School Of Computing and Information Systems

The Capacitated Vehicle Routing Problem (CVRP) is an NP-optimization problem (NPO) that arises in various fields including transportation and logistics. The CVRP extends from the Vehicle Routing Problem (VRP), aiming to determine the most efficient plan for a fleet of vehicles to deliver goods to a set of customers, subject to the limited carrying capacity of each vehicle. As the number of possible solutions increases exponentially with the number of customers, finding high-quality solutions remains a significant challenge. Recently, the Quantum Approximate Optimization Algorithm (QAOA), a quantum–classical hybrid algorithm, has exhibited enhanced performance in certain combinatorial optimization problems, such as …

Khovanov Homology And Legendrian Simple Knots, Ryan J. Maguire

Dartmouth College Ph.D Dissertations

The Jones polynomial and Khovanov homology are powerful invariants in knot theory. Their computations are known to be NP-Hard and it can be quite a challenge to directly compute either of them for a general knot. We develop explicit algorithms for the Jones polynomial and discuss the implementation of an algorithm for Khovanov homology. Using this we tabulate the invariants for millions of knots, generate statistics on them, and formulate conjectures for Legendrian and transversely simple knots.

Confronting Algorithms: Conscience Catching In The Criminal Trial And Beyond, Sherman J. Clark

University of Michigan Journal of Law Reform

Using the question of how to treat algorithmic evidence under the Confrontation Clause as an entry point, I argue that the use of AI in ethically salient situations presents a risk. It may cause us to avoid confronting our own responsibility. This matters because facing up to what we do, including what we delegate, can help us grow and thrive. Bearing responsibility can help us nurture vital capacities, including forms of empathy, honesty, and dignity. In the language of ethics, these are eudaimonist virtues—traits and capacities that can help us live well and fully. We should thus find ways of …

Generalizing Parkinson’S Disease Detection Using Keystroke Dynamics: A Self-Supervised Approach, Shikha Tripathi, Alejandro Acien, Ashley A Holmes, Teresa Arroyo-Gallego, Luca Giancardo

Faculty, Staff and Student Publications

Objective: Passive monitoring of touchscreen interactions generates keystroke dynamic signals that can be used to detect and track neurological conditions such as Parkinson's disease (PD) and psychomotor impairment with minimal burden on the user. However, this typically requires datasets with clinically confirmed labels collected in standardized environments, which is challenging, especially for a large subject pool. This study validates the efficacy of a self-supervised learning method in reducing the reliance on labels and evaluates its generalizability.

Materials and methods: We propose a new type of self-supervised loss combining Barlow Twins loss, which attempts to create similar feature representations with reduced …

Missing Wedge Completion Via Unsupervised Learning With Coordinate Networks, Dave Van Veen, Jesús G Galaz-Montoya, Liyue Shen, Philip Baldwin, Akshay S Chaudhari, Dmitry Lyumkis, Michael F Schmid, Wah Chiu, John Pauly

Faculty, Staff and Students Publications

Cryogenic electron tomography (cryoET) is a powerful tool in structural biology, enabling detailed 3D imaging of biological specimens at a resolution of nanometers. Despite its potential, cryoET faces challenges such as the missing wedge problem, which limits reconstruction quality due to incomplete data collection angles. Recently, supervised deep learning methods leveraging convolutional neural networks (CNNs) have considerably addressed this issue; however, their pretraining requirements render them susceptible to inaccuracies and artifacts, particularly when representative training data is scarce. To overcome these limitations, we introduce a proof-of-concept unsupervised learning approach using coordinate networks (CNs) that optimizes network weights directly against input …

Asteroidal Sets And Dominating Targets In Graphs, Oleksiy Al-Saadi

School of Computing: Dissertations, Theses, and Student Research

The focus of this PhD thesis is on various distance and domination properties in graphs. In particular, we prove strong results about the interactions between asteroidal sets and dominating targets. Our results add to or extend a plethora of results on these properties within the literature. We define the class of strict dominating pair graphs and show structural and algorithmic properties of this class. Notably, we prove that such graphs have diameter 3, 4, or contain an asteroidal quadruple. Then, we design an algorithm to to efficiently recognize chordal hereditary dominating pair graphs. We provide new results that describe the …

Development And Validation Of A Rule-Based Algorithm To Identify Periodontal Diagnosis Using Structured Electronic Health Record Data, Bunmi Tokede, Ryan Brandon, Chun-Teh Lee, Guo-Hao Lin, Joel White, Alfa Yansane, Xiaoqian Jiang, Elsbeth Kalenderian, Muhammad Walji

Faculty, Staff and Student Publications

AIM: To develop and validate an automated electronic health record (EHR)-based algorithm to suggest a periodontal diagnosis based on the 2017 World Workshop on the Classification of Periodontal Diseases and Conditions.

MATERIALS AND METHODS: Using material published from the 2017 World Workshop, a tool was iteratively developed to suggest a periodontal diagnosis based on clinical data within the EHR. Pertinent clinical data included clinical attachment level (CAL), gingival margin to cemento-enamel junction distance, probing depth, furcation involvement (if present) and mobility. Chart reviews were conducted to confirm the algorithm's ability to accurately extract clinical data from the EHR, and then …

Algorithmic Approaches For Object Tracking And Facial Detection Using Drones, Kareem Shahatta, Peter Savarese, Gina Egitto, Jongwook Kim

Computer Science Student Work

Drones are unmanned aerial vehicles that have a variety of uses in many fields such as package delivery and search operations. Tello is a small, programmable drone designed for educational purposes. We developed algorithms using DJI Tello Py, an open-source Application Programming Interface, to command the movements of Tello for tracking a target object (i.e., human). Our algorithms utilize digital image processing techniques on Tello's live video stream to optimize the number of movements Tello needs to reach its target. Our poster presentation will explain our approaches to implement object-tracking and facial detection for Tello, discuss lessons we learned, and …

Algorithmic Design And Computational Modeling Using Dynamic Spectrum Allocation Techniques To Optimize Bandwidth Management In Wireless Communication Systems, Ankit Walishetti

Distinguished Student Work

This study aims to address the pressing need for efficient spectrum management methodologies in wireless communication systems by developing innovative sorting and allocation algorithms. Leveraging Dynamic Spectrum Allocation (DSA) techniques, this research devises strategies to optimize the utilization of bandwidth within existing spectrum space, ultimately reducing the need for network infrastructure expansion.

Ensuring thorough coverage of DSA techniques, 5 distinct transmitter sorting algorithms were programmed and tested across 8 performance metrics designed to measure specific capabilities. For consistency, a single bandwidth allocation program was designed to ‘pack’ transmitters starting from the left endpoint of the spectrum space. Progressively varying the …

The Impact Of Artificial Intelligence And Machine Learning On Organizations Cybersecurity, Mustafa Abdulhussein

Doctoral Dissertations and Projects

As internet technology proliferate in volume and complexity, the ever-evolving landscape of malicious cyberattacks presents unprecedented security risks in cyberspace. Cybersecurity challenges have been further exacerbated by the continuous growth in the prevalence and sophistication of cyber-attacks. These threats have the capacity to disrupt business operations, erase critical data, and inflict reputational damage, constituting an existential threat to businesses, critical services, and infrastructure. The escalating threat is further compounded by the malicious use of artificial intelligence (AI) and machine learning (ML), which have increasingly become tools in the cybercriminal arsenal. In this dynamic landscape, the emergence of offensive AI introduces …

Generalizable Pipeline For Constructing Hiv Risk Prediction Models Across Electronic Health Record Systems, Sarah B May, Thomas P Giordano, Assaf Gottlieb

Faculty, Staff and Student Publications

OBJECTIVE: The HIV epidemic remains a significant public health issue in the United States. HIV risk prediction models could be beneficial for reducing HIV transmission by helping clinicians identify patients at high risk for infection and refer them for testing. This would facilitate initiation on treatment for those unaware of their status and pre-exposure prophylaxis for those uninfected but at high risk. Existing HIV risk prediction algorithms rely on manual construction of features and are limited in their application across diverse electronic health record systems. Furthermore, the accuracy of these models in predicting HIV in females has thus far been …

Trading Cloud Computing Stocks Using Sma, Xianrong Zheng, Lingyu Li

Information Technology & Decision Sciences Faculty Publications

As cloud computing adoption becomes mainstream, the cloud services market offers vast profits. Moreover, serverless computing, the next stage of cloud computing, comes with huge economic potential. To capitalize on this trend, investors are interested in trading cloud stocks. As high-growth technology stocks, investing in cloud stocks is both rewarding and challenging. The research question here is how a trading strategy will perform on cloud stocks. As a result, this paper employs an effective method—Simple Moving Average (SMA)—to trade cloud stocks. To evaluate its performance, we conducted extensive experiments with real market data that spans over 23 years. Results show …

External Support Structures In Fused Deposition Modeling 3d Printing, Adam Mystkowski

Undergraduate Honors Theses

3D Printing, sometimes also referred to as Additive Manufacturing, is a technology that has garnered a lot of attention in the past several years. While the technology has attracted a significant community of hobbyists, the benefits of the technology have also been recognized in manufacturing. While there are many different types of 3D Printing techniques, the most common type is Fused Deposition Modeling (FDM), mainly due to its relatively low cost compared to other types. However, the technique also present a significant limitation: it tends to struggle with models that have overhanging parts. When a layer is extruded by an …

Integrative Machine Learning Approaches For Enhanced Classification Of Genomic Sequences: A Next-Generation Sequencing Perspective, Sujatha Alla, Nagesh Bheesetty, Sai Gireesh Komaragiri, Prasanthi Chidipudi, Joshit Mohanty, Sathish Kumar Chintala, Jubin Thomas, Jayapal Vummadi, Hemanth Volikatla, Navin Kamuni

Engineering Management & Systems Engineering Faculty Publications

The advent of Next-Generation Sequencing (NGS) techniques has revolutionized genomic research by enabling the rapid sequencing of DNA and RNA. This data can be used for various applications, including genome sequencing, transcriptome profiling, metagenomics, and epigenetics studies. For this study, DNA classifier dataset was extracted from UCI repository of machine learning databases. This vast amount of genomic data necessitates the development of sophisticated machine learning (ML) models for effective classification and analysis. This study presents a comprehensive comparison of various ML models, including Support Vector Machines (SVM), Random Forests (RF), and Neural Networks (NNs), approaches, in classifying genomic data. We …

Using Feature Selection Enhancement To Evaluate Attack Detection In The Internet Of Things Environment, Khawlah Harahsheh, Rami Al-Naimat, Chung-Hao Chen

Electrical & Computer Engineering Faculty Publications

The rapid evolution of technology has given rise to a connected world where billions of devices interact seamlessly, forming what is known as the Internet of Things (IoT). While the IoT offers incredible convenience and efficiency, it presents a significant challenge to cybersecurity and is characterized by various power, capacity, and computational process limitations. Machine learning techniques, particularly those encompassing supervised classification techniques, offer a systematic approach to training models using labeled datasets. These techniques enable intrusion detection systems (IDSs) to discern patterns indicative of potential attacks amidst the vast amounts of IoT data. Our investigation delves into various aspects …

Skipresnet: Crop And Weed Recognition Based On The Improved Resnet, Wenyi Hu, Tian Chen, Chunjie Lan, Shan Liu, Lirong Yin

Electrical & Computer Engineering Faculty Publications

Weeds have a detrimental effect on crop yield. However, the prevailing chemical weed control methods cause pollution of the ecosystem and land. Therefore, it has become a trend to reduce dependence on herbicides; realize a sustainable, intelligent weed control method; and protect the land. In order to realize intelligent weeding, efficient and accurate crop and weed recognition is necessary. Convolutional neural networks (CNNs) are widely applied for weed and crop recognition due to their high speed and efficiency. In this paper, a multi-path input skip-residual network (SkipResNet) was put forward to upgrade the classification function of weeds and crops. It …

Scene Classification Of Remote Sensing Image Based On Multi-Path Reconfigurable Neural Network, Wenyi Hu, Chunjie Lan, Tian Chen, Shan Liu, Lirong Yin, Lei Wang

Electrical & Computer Engineering Faculty Publications

Land image recognition and classification and land environment detection are important research fields in remote sensing applications. Because of the diversity and complexity of different tasks of land environment recognition and classification, it is difficult for researchers to use a single model to achieve the best performance in scene classification of multiple remote sensing land images. Therefore, to determine which model is the best for the current recognition classification tasks, it is often necessary to select and experiment with many different models. However, finding the optimal model is accompanied by an increase in trial-and-error costs and is a waste of …

Hite: A Fast And Accurate Dynamic Boundary Adjustment Approach For Full-Length Transposable Element Detection And Annotation, Kang Hu, Peng Ning, Minghua Xu, You Zou, Jianye Chang, Xin Gao, Yaohang Li, Jue Ruan, Bin Hu, Jianxin Wang

Computer Science Faculty Publications

Recent advancements in genome assembly have greatly improved the prospects for comprehensive annotation of Transposable Elements (TEs). However, existing methods for TE annotation using genome assemblies suffer from limited accuracy and robustness, requiring extensive manual editing. In addition, the currently available gold-standard TE databases are not comprehensive, even for extensively studied species, highlighting the critical need for an automated TE detection method to supplement existing repositories. In this study, we introduce HiTE, a fast and accurate dynamic boundary adjustment approach designed to detect full-length TEs. The experimental results demonstrate that HiTE outperforms RepeatModeler2, the state-of-the-art tool, across various species. Furthermore, …

Sccad: Cluster Decomposition-Based Anomaly Detection For Rare Cell Identification In Single-Cell Expression Data, Yunpei Xu, Shaokai Wang, Qilong Feng, Jiazhi Xia, Yaohang Li, Hong-Dong Li, Jianxin Wang

Computer Science Faculty Publications

Single-cell RNA sequencing (scRNA-seq) technologies have become essential tools for characterizing cellular landscapes within complex tissues. Large-scale single-cell transcriptomics holds great potential for identifying rare cell types critical to the pathogenesis of diseases and biological processes. Existing methods for identifying rare cell types often rely on one-time clustering using partial or global gene expression. However, these rare cell types may be overlooked during the clustering phase, posing challenges for their accurate identification. In this paper, we propose a Cluster decomposition-based Anomaly Detection method (scCAD), which iteratively decomposes clusters based on the most differential signals in each cluster to effectively separate …