Physical Sciences and Mathematics Commons^™

Bayesian Computational Methods For Hidden Markov Models, Samson Laine Ghebremariam

Open Access Theses & Dissertations

Hidden Markov Models (HMMs) have been applied to many real-world problems. Hidden Markov modeling has recently become increasingly important and popular among researchers,and many software tools are based on them. Given that the models are rich in mathematical structure, they can form theoretical foundation for use in a wide range of applications. Hidden Markov models provide a universal configuration for statistical analysis of a large variety of DNA sequences containing symbols A, C, G, T. In a HMM, it is impossible to figure out what state the model is in by just having a look at the symbol generated.

A …

Gpu Based Parallel Smoothing Of Seismic Tomography Models, Ivan Gris

Open Access Theses & Dissertations

Three-dimensional models of the velocity structure of the Earth's crust are an important and relevant factor for several types of analyses across disciplines. Crustal velocity models are also commonly used to analyze and search for different materials of interest or to determine and differentiate many aspects of life on Earth during different eras.

Seismic tomography techniques, both in two and three dimensions, perform image reconstruction of the crust of the Earth. Seismic tomography algorithms can calculate crustal velocity structure through inversion of traveltimes of seismic waves produced by natural events, such as earthquakes, or controlled source experiments, such as explosions. …

Monitoring Ecosystem Dynamics In An Arctic Tundra Ecosystem Using Hyperspectral Reflectance And A Robotic Tram System, Santonu Goswami

Open Access Theses & Dissertations

Global change, which includes climate change and the impacts of human disturbance, is altering the provision and sustainability of ecosystem goods and services. These changes have the capacity to initiate cascading affects and complex feedbacks through physical, biological and human subsystems and interactions between them. Understanding the future state of the earth system requires improved knowledge of ecosystem dynamics and long term observations of how these are being impacted by global change. Improving remote sensing methods is essential for such advancement because satellite remote sensing is the only means by which landscape to continental-scale change can be observed.

The Arctic …

Quality Of Wastewater In The El Paso, Texas Region--Analysis Of Pharmaceuticals And Personal Care Products Using High Performance Liquid Chromatography Tandem Mass Spectrometry, Rodolfo Guerrero Jr.

Open Access Theses & Dissertations

Pharmaceuticals and Personal Care Products (PPCPs), such as household cleaning materials, prescription medication, and personal hygiene products, are pollutants of emerging concern that are found in 80% of our water system. Because of their applications, PPCPs are subsequently being released into wastewater; however, current wastewater treatment facilities are not regulated or designed to remove PPCPs. Therefore, these compounds are discharged into the environment on a continual basis. The effects of PPCPs on human health are not yet well known; however, recent research has found that exposure to these chemicals has some adverse developmental effects on aquatic species at low concentrations …

The Impact Of Sulfide Mineral Weathering On The Isotopic Signatures Of Fe And Cu In Metal-Rich Streams, Ana Lourdes Gutierrez

Open Access Theses & Dissertations

The oxidative weathering of sulfide minerals, like pyrite, at the Earth's surface controls the formation of acid mine drainage sites as well as the Fe isotope composition of these areas and the main processes taken place. In this study, water and rock samples were collected from acidic drainages (most from abandoned mining sites) from the St. Juan Mountains in Colorado. The water samples were measured in-situ for dissolved oxygen, dissolved Fe(II), pH, and conductivity. Filtered acidified, unfiltered acidified, and Fe-oxide samples were analyzed for their metal concentrations. Ion-exchange chromatography was applied to both water and digested oxide fractions in order …

Application Of The Water Poverty Index In Border Colonias Of West Texas, Marcelo Korc

Open Access Theses & Dissertations

This study applied the Water Poverty Index (WPI) in border colonias and other rural areas of west Texas. The colonias are mostly unincorporated communities located primarily in New Mexico and Texas along the border with Mexico and are characterized by high poverty rates and substandard living conditions. In Texas, access to drinking water and sanitation services has been identified as one of the most significant determinants of health in over 350 colonias with about 50 thousand residents.

The WPI is a multidimensional measure that links household welfare with water availability. WPI components were identified and prioritized by a wide range …

An Integrated Geographic Information Systems (Igis) Analysis And Definition Of The Tectonic Framework Of Northern Mexico, Carlos Manuel Martinez

Open Access Theses & Dissertations

Crustal rupture structures reactivated in the course of the tectonic history of northern Mexico are the surface expressions of planes of weakness, in the form of simple or composite rectilinear features or slightly curved, defined as lineaments. Unless otherwise defined as strike-slip faults, lineaments are part of parallel and sub-parallel oblique convergent or oblique divergent tectonic zones cross cutting the Sierra Madre Occidental and northern Mexico, in a NW trend. These shear zones are the response to the oblique subduction of the Farallon plate beneath North America.

Kinematic analysis of five selected sites in northern Mexico, three basins and two …

Solving The Partial Differential Equation Of Vibrations With Interval Parameters Using The Interval Finite Difference Method, Brenda G. Medina

Open Access Theses & Dissertations

Accuracy and efficiency are among the main factors that drive today's innovative disciplines. As technology rapidly advances, efficiency takes on new meanings but what about accuracy? How accurate is accurate? Human error, uncertainties in measurement, and rounding errors are just some causes of inaccuracy. Interval Computations is an area that allows for such issues to be taken into account; for each measurement attained (for example), an interval can be built by considering the error associated with the measurement, and such an interval can be utilized in the mathematical computations of interest.

We consider the partial differential equation (PDE) of vibrations …

Fold-Thrust System Overprinting Syn-Rift Structures On The Margin Of An Inverted Rift Basin: Indio Mountains, West Texas, Seth Joel Page

Open Access Theses & Dissertations

Detailed mapping in the central Indio Mountains in west Texas, reveal a complex stacking of thrust sheets that record inversion of the Mesozoic Chihuahua Trough rift basin. Important newly recognized structural complexities include both folding of older thrust sheets and development of younger, out-of-sequence thrusts that cut across older folds; detachment fold horizons within thrust sheets; and a regional anticlinorium that exposes the Squaw thrust in a structural half-window bounded on the west by the Neogene Indio normal fault. The Chihuahua trough originated as part of the late Mesozoic border rift system and was inverted during Laramide thrusting. Remnants of …

Supramolecular Organization Of Nanoparticles, Brenda M. Porta Linnell

Open Access Theses & Dissertations

The study of supramolecular structures with nano-architectures has become an active area of research in recent years. They have the potential to generate functional materials with applications in medicine and emerging technologies. In this dissertation, the supramolecular organization of gold nanoparticles (AuNP) and other nano-scale structures such as discrete styrene-based polymers was investigated. The synthesis and characterization of metal-mediated AuNPs systems using pendant ligands on the AuNP such as 11-diethylenetriamine-undecane-1-thiol, 11-Mercapto-undecanoic acid [2-(2-amino-ethylamino)-ethyl]-amide, Bis(11-oxo-nicotinic acid, undecine)disulfide, and 11-mercaptoundecanoic acid, and using Cu(II) to mediate the formation of supramolecular AuNP systems with sizes of 200 nm ¡V 3 fÃ?m, are …

Equation Of State Of A Dense And Magnetized Fermion System, Israel Portillo Vazquez

Open Access Theses & Dissertations

The equation of state of a system of fermions in a uniform magnetic field is obtained in terms of the thermodynamic quantities of the theory by using functional methods. It is shown that the breaking of the O(3) rotational symmetry by the magnetic field results in a pressure anisotropy, which leads to the distinction between longitudinal- and transverse-to-the-field pressures. A criterion to find the threshold field at which the asymmetric regime becomes significant is discussed. This threshold magnetic field is shown to be the same as the one required for the pure field contribution to the energy and pressures to …

An Experimental Study On The Effect Of Particle Geometry On Drag And Flow Behaviors In A Packed Fluidized Bed, Md Mahamudur Rahman

Open Access Theses & Dissertations

Gasification offers a promising solution to producing fuels effectively in the coming years by providing a low-cost energy system, clean environmental performance, and reliability. Feedstock is prepared and fed to a gasifier in either a dry form or as slurry (mixed with water). One application of this technology uses heat, pressure, and steam to convert feedstock into a gaseous mixture, composed primarily of carbon monoxide (CO) and hydrogen (H2), named as syngas. Several technical and commercial issues were identified by the Nation Energy Technology Laboratory (NETL) in 2006 Multiphase workshop. US Department of Energy (DOE) is now focusing on attaining …

Assessing Data Quality In A Sensor Network For Environmental Monitoring, Gesuri Ramirez

Open Access Theses & Dissertations

Assessing the quality of sensor data in environmental monitoring applications is important, as erroneous readings produced by malfunctioning sensors, calibration drift, and problematic climatic conditions, such as icing or dust, are common.Traditional data quality checking and correction is a painstaking manual process, so the development of automatic systems for this task is highly desirable.

This study investigates machine learning methods to identify and clean incorrect data from a real-world environmental sensor network, the Jornada Experimental Range, located in Southern New Mexico. We evaluated several learning algorithms and data replacement schemes, and developed a method to identify the problematic sensor. The …

Digital Image Processing Based On Sparse Representation And Convex Programming, Carlos Andres Ramirez

Open Access Theses & Dissertations

Sparse representation models have been of central interest in recent years due to important achievements in computational harmonic analysis, such as wavelet transformations, and the most recent sampling theory, compressed sensing. Numerous applications based on sparse models have been studied in the last decade leading to promising results. These applications include areas in seismology, image processing, wireless sensor networks, computed tomography and magnetic resonance imaging just to mention a few.

In this work, we propose to extend such applications in the area of image processing, particularly for the image segmentation problem, and examine algorithms involved in sparse modeling from both …

X-Ray Diffraction Studies Of Room And Intermediate Tempertaure Phases Of Phosphate Based Solid Acids, Kiran Vajrapu

Open Access Theses & Dissertations

In this work, the MH2PO4-type solid acids (where M= Cs, K, Rb) structure and properties are studied and their contribution towards fuel cell industry is understood. Some research groups have shown that, CsH2PO4 (CDP) and RbH2PO4 (RDP) shows sudden, several order of magnitude jumps in their proton conductivity at certain high temperatures.(31, 32) This so called superprotonic behavior of these compounds makes them a fuel cell electrolyte at elevated temperatures. (33) Most of the research groups working on two possible causes to get the reliable information for the high proton conductivity: polymorphic phase transition (Botez et al.,) and thermal dehydration …

Development Of Load Balancing Algorithm Based On Analysis Of Multi-Core Architecture On Beowulf Cluster, Damian Valles

Open Access Theses & Dissertations

In this work, analysis, and modeling were employed to improve the Linux Scheduler for HPC use. The performance throughput of a single compute-node of the 23 node Beowulf cluster, Virgo 2.0, was analyzed to find bottlenecks and limitations that affected performance in the processing hardware where each compute-node consisted of two quad-core processors with eight gigabytes of memory. The analysis was performed using the High Performance Linpack (HPL) benchmark.

In addition, the processing hardware of the compute-node was modeled using an Instruction per Cycle (IPC) metric that was estimated using linear regression. Modeling data was obtained by using the Tuning …

Evaluating Suspended Dust Particulate Matter From Anthropogenically - Altered Lands, Roberto Velarde

Open Access Theses & Dissertations

Substantial dust loads are transported from drylands including the Saharan, Asian, and Chihuahuan Desert deposits by localized to planetary-scale processes to nearby and distal sites. These dusts may carry harmful constituents. To evaluate dust movement patterns and characteristics relative to carried constituents, three studies are presented comprising (A) Localized displacement of uranium and progeny radionuclides from high-grade uranium ore storage piles at Peña Blanca, Chihuahua, Mexico; (B) Long-distance transport of plutonium via Saharan and Asian aeolian pathways; and (C) Dust movement patterns in military maneuvering and non-maneuvering areas at White Sands Missile Range (WSMR), New Mexico. Study (A) evaluated surface …

Distributional Properties Of Inversions And Segmentation Algorithms For Rna Sequences, Sameera Dhananjaya Viswakula

Open Access Theses & Dissertations

Ribonucleic acid (RNA) is a long single stranded molecule made up of four types of nucleotide bases: Adenine (A), Cytosine(C), Guanine (G) and Uracil (U). It folds back on itself and forms C-G and A-U complementary base pairs. The set of such hydrogen-bonded pairs in an RNA molecule is called its secondary structure. Knowing the secondary structure of RNA is useful for understanding its biological function. Prediction of RNA secondary structure from the nucleotide sequence has been an important bioinformatics problem for over two decades.

The work in this thesis is motivated by the need to improve the secondary structure …

Joint Geophysical Data Analysis For Geothermal Energy Exploration, Antony Munika Wamalwa

Open Access Theses & Dissertations

Geophysical data modelling often yields non-unique results and hence the interpretation of the resulting models in terms of underlying geological units and structures is not a straightforward problem. However, if multiple datasets are available for a region of study, an integrated interpretation of models for each of the geophysical data may results to a more realistic geological description. This study not only demonstrates the strength of resistivity analysis for geothermal fields but also the gains from interpreting resistivity data together with other geophysical data such as gravity and seismic data. Various geothermal fields have been examined in this study which …

An Investigation Of The Seismic Hazards Of The El Paso-Juarez Region: The Nature And Extent Of The Southern East Franklin Mountains Fault Zone, Victor Manuel Avila

Open Access Theses & Dissertations

ABSTRACT

The El Paso-Ciudad Juarez Region is situated at the southern end of the active Rio Grande Rift within the Mesilla and Hueco basins. The Hueco basin is separated from the eastern Franklin Mountains by a prominent fault, the Eastern Boundary Fault. Studies of this fault have revealed fault scarps that displace Quaternary deposits (Keaton et al., 1995; Raney and Collins, 1990; Lovejoy, 1976). This fault is cataloged as an active fault in the National Seismic Hazard Map with an estimated slip rate of 0.1 mm/yr. A fault with similar characteristics as the Eastern Boundary Fault extends further to the …

Magnetic-Field Induced Stability In Two-Flavor Color Superconductivity, Churna B. Bhandari

Open Access Theses & Dissertations

It has long been understood that the ground state of a superdense quark system, a Fermi liquid of weakly interacting quarks, is unstable with respect to the formation of diquark condensates. This nonperturbative phenomenon is essentially equivalent to the Cooper instability of conventional BCS superconductivity. As the quark pairs have nonzero color charge, this kind of superconductivity breaks the SU(3) color gauge symmetry, thus it is called color superconductivity. A peculiar feature of spin-zero color superconductivity is the lack of Meissner effect for a combination of the regular electromagnetic field and one of the gluon fields. This combination behaves as …

Magnetic And Structural Properties Of Zinc-Doped Nickel Ferrite, Kanokporn Chattrakun

Open Access Theses & Dissertations

We have used dc-magnetization, ac-magnetic susceptibility and x-ray diffraction (XRD) to investigate the microscopic origin of the magnetic property modifications induced by zinc doping in bulk and nano-sized nickel ferrite. Magnetic measurements indicate that the nanoparticle energy barrier to magnetization reversal, E_B, and the bulk saturation magnetization, M_s, follow similar dependences on the zinc doping fraction, x. Both these magnetic quantities initially increase with increasing x, reach a maximum at x~0.5, and eventually decrease upon further doping. Synchrotron and laboratory powder XRD data show no evidence of significant structural modifications for x~0.5: we find the lattice …

Analysis Of Endocrine Disrupting Compounds In Wastewater Treatment Plants: A Perspective Of Trans-Boundary Waterborne Pollution, Roberto De La Torre

Open Access Theses & Dissertations

Recent decades have brought an increasing concern of potential adverse human and ecological health effects resulting from Endocrine Disruptor Compounds (EDCs). In particular from new emerging compounds such as natural estrogens (e.g., 17©¬-estradiol, estrone), synthetic estrogens (e.g., 17Â¥á-ethynylestradiol), bisphenol A (BPA), nonylphenol ethoxylates (NPEOS), and nonylphenol (NP). These chemicals which are also known as organic wastewater contaminants are released directly to the environment after passing through wastewater treatment plants (WWTPs), which often are not designed to remove them from the effluent. The occurrence of the aforementioned compounds in surface water is becoming of increasing concern worldwide, and has led to …

Development Of A Web-Based Geographic Information System For Arctic Science, George Walker Johnson

Open Access Theses & Dissertations

Environmental science is a large field of study that requires the acquisition of data for decision making in solving environmental issues. Leveraging desktop geographic information systems (GIS) and web-based GIS (WebGIS) systems for assisting in the problem solving processes can benefit both the research community and policy makers for decision making activities. Ensuring interoperability between desktop, web, and server GIS is essential for maximizing access, sharing and manipulation of data. Interoperability is maximized through the adoption of best practices, use of open standards, and utilization of Spatial Data Infrastructures (SDI). While many of the interoperability challenges such as infrastructure, data …

A Third-Order Non-Oscillatory Finite-Volume Transport Scheme For Atmospheric Modeling, Kiran Kumar Katta

Open Access Theses & Dissertations

Atmospheric numerical modeling has been going through drastic changes over the past decade, mainly to utilize the massive computing capability of the petascale systems. This obliges the modelers to develop grid systems and numerical algorithms that facilitate exceptional level of scalability on these systems. The numerical algorithms that can address these challenges should have the local properties such as the high on-processor operation count and minimum parallel communication i.e. high parallel efficiency, it should also satisfy the following properties such as inherent local and global conservation, high-order accuracy, geometric flexibility, non-oscillatory advection, positivity preservation.

In the present work, A Third-order …

Assessment Of Intra-Urban Traffic-Related Air Pollution On Asthmatic Children's Exposure At Schools In The Paso Del Norte Region, Amit Ugamraj Raysoni

Open Access Theses & Dissertations

Traffic-related air pollution can be a major public health concern in any urban area. This problem is compounded in the Paso del Norte region that has experienced rapid economic growth, and a substantial number of people living in close vicinity of major roadways. The desert surroundings, arid weather, frequent temperature inversions, heavy border traffic at the international ports of entry between El Paso and Ciudad Juárez, and poorly maintained vehicle fleet further exacerbates this problem. A growing body of air quality and epidemiologic research has discerned the linkage between traffic emissions and respiratory disorders.

Initial health investigations in the Paso …

The Exploratory Value Of Agent-Based Models In Social Science, Ricardo Andress Rivera

Open Access Theses & Dissertations

N/A

Seismological Studies In South-Central Alaska And Northern Mexico, Oscar Mario Romero De La Cruz

Open Access Theses & Dissertations

The work in this study is focused on two different areas, south-central Alaska and northern Mexico. In the first study area, I calculated dynamic stress drops for moderate sized earthquakes and performed receiver function analyses. The goal of the stress drop studies was to determine if events occurring within the more strongly coupled portion of the subducting slab have higher stress drops. My results shows that higher stress drops correspond to the locked and strongly coupled region in Prince William Sound, and lower stress drops are associated with the Cook Inlet region, a zone of relaxation of the plate interface. …

A Sparse Representation Technique For Classification Problems, Reinaldo Sanchez Arias

Open Access Theses & Dissertations

In pattern recognition and machine learning, a classification problem refers to finding an algorithm for assigning a given input data into one of several categories. Many natural signals are sparse or compressible in the sense that they have short representations when expressed in a suitable basis. Motivated by the recent successful development of algorithms for sparse signal recovery, we apply the selective nature of sparse representation to perform classification. In order to find such sparse linear representation, we implement an l₁-minimization algorithm. This methodology overcomes the lack of robustness with respect to outliers. In contrast to other classification …

Algorithms For Training Large-Scale Linear Programming Support Vector Regression And Classification, Pablo Rivas Perea

Open Access Theses & Dissertations

The main contribution of this dissertation is the development of a method to train a Support Vector Regression (SVR) model for the large-scale case where the number of training samples supersedes the computational resources. The proposed scheme consists of posing the SVR problem entirely as a Linear Programming (LP) problem and on the development of a sequential optimization method based on variables decomposition, constraints decomposition, and the use of primal-dual interior point methods. Experimental results demonstrate that the proposed approach has comparable performance with other SV-based classifiers. Particularly, experiments demonstrate that as the problem size increases, the sparser the solution …