Physical Sciences and Mathematics Commons^™

A Proposed Epithermal Model For The High Grade District, California, Michael Nicholas Feinstein

Open Access Theses & Dissertations

A historic gold mining district in northeastern California has not been incorporated into the global knowledge base for precious metal vein deposits. This study collected various data types which are important characteristics in the classification and understanding of vein deposits. The High Grade District (HGD) is a gold mining site located in the northeast corner of Modoc County, California, in the Warner Mountains. The Warner Mountains are composed of Tertiary eruptive centers, cropping out between valleys formed through extensional tectonics. Mineralization of the HGD displays abundant silicification, adularia, and gold; these characteristics are sufficient to classify mineralization as low-sulfidation epithermal …

Estimating Statistical Characteristics Under Interval Uncertainty And Constraints: Mean, Variance, Covariance, And Correlation, Ali Jalal-Kamali

Open Access Theses & Dissertations

In many practical situations, we have a sample of objects of a given type. When we measure the values of a certain quantity x for these objects, we get a sequence of values x1, . . . , xn. When the sample is large enough, then the arithmetic mean E of the values xi is a good approximation for the average value of this quantity for all the objects from this class. Other expressions provide a good approximation to statistical characteristics such as variance, covariance, and correlation.

The values xi come from measurements, and measurement is never absolutely accurate.

Often, …

Gamma And Generalized Gamma Distributions, Victor Hugo Jiménez Nava

Open Access Theses & Dissertations

We present the Generalized Gamma Distribution, study its properties and derive the estimators of the parameters. This distribution includes many standard forms, like: Gamma, Exponential, Weibull, Half Normal and others. Sum and ratios of independent generalized gamma lead to intractable forms. However approximation works well. In particular two-moment gamma and three moment normal approximations are shown to approximate the sum of k independent gamma as well as generalized gamma distributions.

Computational Methods Of Hidden Markov Models With Respect To Cpg Island Prediction In Dna Sequences, Roberto Angel Ortega

Open Access Theses & Dissertations

Hidden Markov models (HMM's) are a specific case of Markov models where, contrary to Markov chains, the observer is unaware of what state the model was in when the symbol is observed. Like Markov chains, HMM's assume that the future state of a sequence is dependent only on the current state of the sequence. The parameters associated with HMM's are transition and emission probabilities, where transition probabilities are associated with the probability of transitioning from one state to another, and emission probabilities are the probabilities associated with observing a symbol given it came from a specific state.

The structure of …

Assessing Measurement Invariance In The Presence Of Testlets, Luis Andres Alvarado

Open Access Theses & Dissertations

Dealing with measurement invariance has been an issue of concern in confirmatory factor analysis for many years. It is important to establish measurement invariance across groups so that instruments may be validly used in multiple groups for comparison of the mean or summative scores. Throughout the years, many studies have considered testing for measurement invariance in factor models. However, there have been no studies that assess measurement invariance when so-called testlets should be modeled in the factor analytic model. Testlets add nuisance covariation to the model which can interfere when trying to detect measurement invariance. In the past, models have …

Bayesian Computational Methods For Hidden Markov Models, Samson Laine Ghebremariam

Open Access Theses & Dissertations

Hidden Markov Models (HMMs) have been applied to many real-world problems. Hidden Markov modeling has recently become increasingly important and popular among researchers,and many software tools are based on them. Given that the models are rich in mathematical structure, they can form theoretical foundation for use in a wide range of applications. Hidden Markov models provide a universal configuration for statistical analysis of a large variety of DNA sequences containing symbols A, C, G, T. In a HMM, it is impossible to figure out what state the model is in by just having a look at the symbol generated.

A …

Distributional Properties Of Inversions And Segmentation Algorithms For Rna Sequences, Sameera Dhananjaya Viswakula

Open Access Theses & Dissertations

Ribonucleic acid (RNA) is a long single stranded molecule made up of four types of nucleotide bases: Adenine (A), Cytosine(C), Guanine (G) and Uracil (U). It folds back on itself and forms C-G and A-U complementary base pairs. The set of such hydrogen-bonded pairs in an RNA molecule is called its secondary structure. Knowing the secondary structure of RNA is useful for understanding its biological function. Prediction of RNA secondary structure from the nucleotide sequence has been an important bioinformatics problem for over two decades.

The work in this thesis is motivated by the need to improve the secondary structure …

Principal Differential Analysis With Covariates : A Simulation Study On The Effect Of The Smoothing Parameters, Indika Varuna Mallawaarachchi

Open Access Theses & Dissertations

Principal Differential Analysis deals with functional data. The word functional data refers to a collection of curves that are independent and measured on a dense grid of time points in an interval. These time points can be equally or unequally spaced. A differential equation is believed capable of capturing the features of these n curves.

Ramsay(1996) first introduced Principal Differential Analysis (PDA) as an alternative to the Principal Component Analysis(PCA). PDA finds a linear differential equation that captures features of a collection of curves, in order to have a low dimensional approximation for functional data. PDA is based on the …

Estimating The Effect Of Dust And Low Wind Events On Hospitalizations For Asthma While Adjusting For Hourly Levels Of Air Pollutants, Priyangi Kanchana Bulathsinhala

Open Access Theses & Dissertations

El Paso, Texas is known as one of the dust hotspots in North America. We explore the effect of dust and low wind events on asthma admissions in El Paso, Texas between 2000 and 2005. Conditional logistic regression with a case-crossover design was used to estimate the probability of hospitalization after dust and low wind events while controlling for pollutants with hourly monitor measurements, and weather. The historical functional linear model is used to incorporate the hourly pollutant measures into the regression model with a continuous lag, as an alternative to a distributed lag model based on daily averages. The …