Physical Sciences and Mathematics Commons^™

Utilizing Machine Learning Techniques For Accurate Diagnosis Of Breast Cancer And Comprehensive Statistical Analysis Of Clinical Data, Myat Ei Ei Phyo

USF Tampa Graduate Theses and Dissertations

Breast cancer represents a formidable malignancy, presenting a substantial threat to global health and individual well-being. Conventionally, it is widely held that the prognosis for breast cancer patients hinges predominantly upon the timing of diagnosis and the extent of cancer progression, typically delineated by its stage. However, emerging evidence from robust regression and machine learning analyses challenges this prevailing notion. The results indicate that survival months cannot be solely attributed to diagnosis and socio-economic factors. Instead, additional variables such as existing diseases and treatment complexities may contribute to the intricate landscape of breast cancer outcomes.

This research aims to delve …

Predicting Gender Of Author Using Large Language Models (Llms), Satya Uday Sanku

USF Tampa Graduate Theses and Dissertations

The advent of text data from social media, blogs, movie reviews, and other textual sources has opened new avenues for research, particularly in the domain of Author Profiling. Author Profiling helps in Capturing the Stylistic features and also useful for analyzing the required elements in the written text. This Study addresses one of the tasks in Author Profiling which is termed as gender detection or Classification of Gender from Text. The main goal of this research is to obtain valuable and relevant gender characteristics that will accurately classify the Author’s gender of a review extracted from an Anime Review website. …

Interrelationships Among Local Values Of Wet Bulb Globe Temperature, Heat Index, And Adjusted Temperature, Andrea Giraldo

USF Tampa Graduate Theses and Dissertations

Occupational heat stress significantly affects outdoor workers who face challenges due to increased heat exposure. Because of the prevalence of heat illness, it is important to measure heat stress for outdoor workers. Monitoring occupational heat stress most often relies on the Wet Bulb Globe Temperature (WBGT) measure. Heat Index (HI) is a widely used measure to account for air temperature and humidity. Adjusted Temperature (Tadj) considers air temperature, humidity and estimates radiant heat. There is interest in predicting WBGT from HI and HI from WBGT. This study builds on previous USF research by Bernard and Iheanacho and Irvin to evaluate …

Investigating The Causes Of Lake Level Variability On A Modern Carbonate Platform, Natalie M. Salazar

USF Tampa Graduate Theses and Dissertations

Lakes on carbonate islands are known to reduce freshwater lens volumes and alter freshwater lens distribution; however, the magnitude and controlling factors between lake and freshwater lens interactions remain poorly understood. Since freshwater lenses are thin and can be fragmented by lakes in small carbonate islands, it is important to understand the magnitude of exchange between lakes and the freshwater lens to understand potential groundwater depletion. This study utilized high temporal resolution water levels and meteorological data to quantify monthly water budgets for seven lakes on San Salvador Island, The Bahamas. The monthly water budgets accounted for rainfall, potential evaporation, …

Dissolved Nickel Speciation At The Bermuda Atlantic Time-Series Study (Bats) Site, Caitlyn E. Parente

USF Tampa Graduate Theses and Dissertations

Here I present the first depth profiles of dissolved nickel (DNi) speciation over an annual cycle at the Bermuda Atlantic Time-series Study (BATS) site in the North Atlantic. Seawater samples were collected in March, May, August, and November 2019 and analyzed for labile DNi using competitive ligand exchange-adsorptive cathodic stripping voltammetry (CLE-AdCSV). Labile DNi was measured by CLE-AdCSV as the fraction of DNi that exchanges with an added competitive ligand in an overnight equilibration. Results revealed two distinct fractions of DNi present throughout the water column: a labile fraction, and a strongly organically complexed (i.e., non-labile) fraction. More than 50% …

The Effect Of The Covid-19 Pandemic On The Environmental Perceptions Of College Students, Sydney H. Kaylor

USF Tampa Graduate Theses and Dissertations

In this study, the environmental perception changes in college students during the COVID-19 pandemic were investigated. During the almost worldwide lockdown between March and December 2020, many students experienced dramatic changes in their socioeconomic life that have affected their well-being, ability to learn, and environmental perceptions. Students were sent home from college campuses, many businesses were shut down, and changes were seen in the environment throughout the world. The many industries and businesses that were shut down decreased the pollution that was in the atmosphere, in our water, and on the land. In many places, lockdown policies lead to improved …

Metatranscriptomic Insights Into The Interaction Between Microcystis Blooms And Hydrogen Peroxide, Taylor L. Hancock

USF Tampa Graduate Theses and Dissertations

For this dissertation I studied the interactions of hydrogen peroxide and cyanobacterial harmful algal blooms (cHABs) dominated by Microcystis in the Caloosahatchee River, FL. Specifically, I examined how taxonomic and functional succession relates to both natural hydrogen peroxide dynamics and hydrogen peroxide added to the environment as a cHAB treatment. Chapter 2 investigated how taxonomic succession and gene expression patterns relate to blooms and associated elevated hydrogen peroxide concentrations. The results showed that gene expressions related to cyanobacterial growth were positively correlated with hydrogen peroxide. The genes identified included enzymes capable of hydrogen peroxide generation which were expressed by blooming …

The Role Of Muslim Women In Nigeria’S Socioeconomic Development Through The Implementation Of The United Nations Sustainable Development Goals, Faqiat Afolake Adeaga

USF Tampa Graduate Theses and Dissertations

This research explores the often underestimated yet pivotal role of Muslim women in propelling socio-economic development in Nigeria, specifically focusing on the implementation of the United Nations Sustainable Development Goals (SDGs). The primary research question seeks to comprehend the transformative impact of faith-based women-led NGOs, including Ansar-ud- Deen, Nawair-ud-Deen, FOMWAN, and NASFAT, on Muslim women's empowerment and their contribution to SDG1 (extreme poverty), SDG3 (health), SDG4 (education), and SDG5 (gender equality) in Nigeria. Simultaneously, the secondary research question explores successful strategies employed by these organizations in empowering Muslim women, with a keen focus on potential areas for improvement. Incorporating research …

Surface Modification Of Poly(4,4'-Oxydiphenilene Pyromellitimide) With Low-Pressure Plasma Treatment, Cihan Aktas

USF Tampa Graduate Theses and Dissertations

This study explores the change of the wetting characteristics of commercially availablepolyimide (PI), Kapton® HN, films a type of poly(4,4′-oxydiphenylene-pyromellitimide), following treatment with low-pressure plasmas of carbon tetrafluoride (CF4), air, hydrogen (H2), carbon-dioxide (CO2) and oxygen (O2) gases as well as the surface texturing via laser-exposure procedure. The water contact angle (CA) and surface free energy (SFE) of untreated PI films were determined as 82.4°±0.8 and 45.0±0.3 mN/m, respectively. After CF4 plasma gas treatment, the CA value of PI films increased to 110.2°±1.0, while it decreased to 9.3°±2.3 after O2 plasma gas treatment. The surface free energy (SFE) of PI …

Brain-Inspired Spatio-Temporal Learning With Application To Robotics, Thiago André Ferreira Medeiros

USF Tampa Graduate Theses and Dissertations

The human brain still has many mysteries and one of them is how it encodes information. The following study intends to unravel at least one such mechanism. For this it will be demonstrated how a set of specialized neurons may use spatial and temporal information to encode information. These neurons, called Place Cells, become active when the animal enters a place in the environment, allowing it to build a cognitive map of the environment. In a recent paper by Scleidorovich et al. in 2022, it was demonstrated that it was possible to differentiate between two sequences of activations of a …

Determining The P-Wave Velocity Structure In The Near-Surface Of Nw Miami, Florida, Using Quarry Blasts, Elham Moslemi

USF Tampa Graduate Theses and Dissertations

The fact that Florida is an earthquake-free region has caused seismologists to pay less attention to it. Few earthquakes in this state mean it is not a usual practice to study the propagation of seismic waves. However, utilizing data from quarry blasts, we studied wave propagation in this region. The primary objective of the project is to investigate the near-surface P-wave velocity structure and factors that may affect it. We also analyzed the amplitude of signals versus distance and blast size. A network of up to 10 Raspberry Shake instruments around the NW Miami-Lakes mining area was deployed where four …

Methods For Analytical And Biophysical Analysis For Investigation Of Stimulator Of Interferon Genes In Drug Discovery, William Emmett Brian Lawless

USF Tampa Graduate Theses and Dissertations

This work elaborates on analytical and biophysical techniques including high pressure liquid chromatography (HPLC), mass spectrometry quadrupole time-of-flight (MS-QToF), dynamic light scattering (DLS), microscale thermophoresis (MST), surface plasmon resonance (SPR), isothermal calorimetry (ITC), size exclusion chromatography, and native gel electrophoresis. A basic overview is described for each technique and is designed for easy understanding by both novice and experienced analysts. Best practices for each technique are discussed and suggestions are made for protocol improvements or troubleshooting. Protocol development is discussed, and a method is introduced for MST that can be adapted to any target protein for rapid screening of analog …

Integration Of Algae And Biomass Processes To Synthesize Renewable Bioproducts For The Circular Economy, Jessica Martin

USF Tampa Graduate Theses and Dissertations

Rapid population growth and global industrialization have substantially heightened the demand for fossil-based fuels and products in various sectors of the global economy, including energy production, transportation fuels, and as raw materials for petrochemicals. The intense consumption of fossil fuels has caused immense environmental impacts, especially pertaining to carbon dioxide emissions. Shifting to renewable feedstocks (raw materials) is expected to reduce these emissions by lowering the carbon footprint of fuels and products compared to traditional fossil-derived alternatives. This transition aligns with the goal of creating a sustainable and circular economy, emphasizing efficient resource use, and reducing waste generation through recycling …

Syntheses, Photophysics, & Application Of Porphyrinic Metal-Organic Frameworks, Zachary L. Magnuson

USF Tampa Graduate Theses and Dissertations

Porphyrins are a group of heterocyclic macrocycles that play crucial roles in various biological processes such as electron transfer, catalysis, and sensing. Hemoglobin, which carries oxygen in the blood of mammals, and chlorophyll, which drives photosynthesis in plants and algae, are both porphyrins. The ability of porphyrins to bind metal ions and their unique electronic and photophysical properties make them an excellent platform for designing functional materials for various applications, often drawing inspiration from their function in nature. Metal-organic frameworks (MOFs) are a class of porous materials that have been extensively studied in recent years due to their high surface …

Synthetic Studies Of Potential New Ketogenic Molecules, Mohammad Nazmus Sakib

USF Tampa Graduate Theses and Dissertations

The ketogenic diet has gained popularity in the past few decades among people and physicians due to its various health benefits. A significant amount of research has been done for the modification of the original ketogenic diet and investigation of its potential health benefits. However, synthesis of novel ketogenic compounds as a dietary supplement has not received the same level of attention. That is the primary objective of this research project. The first chapter of this manuscript describes the synthesis of various short and medium chain esters of different polyols that have been done so far, and areas of their …

In Silico And In Vitro Drug Discovery Strategies And The Chemical Investigation Of Endophytic Fungi, Sarah Grace Dietrick

USF Tampa Graduate Theses and Dissertations

The biodiversity of our global marine ecosystems provides substantial treasure to discover: chemistry. Marine organisms that live in proximity to one another use their unique chemistry to compete with one another and thrive in their environment. Benthic invertebrates, specifically, that lack physical means of protection will produce secondary metabolites as a means of defense from their surroundings and predators. The compounds which they produce are ordinarily species-specific, highly diverse biomolecules. Biosynthetic processes within an organism construct these secondary metabolites from fragments of primary metabolites (amino acids, fatty acids, sugars, and so on). Their roles in protection have antibiotic, toxic, and …

All Quiet On The Digital Front: The Unseen Psychological Impacts On Cybersecurity First Responders, Tammie R. Hollis

USF Tampa Graduate Theses and Dissertations

Driven by the increasing frequency of cyberattacks and the existing talent gap between industry needs and skilled professionals, this research study focused on the crucial human element in the domain of cybersecurity incident response. The objective of this dissertation was to offer a meaningful exploration of the lived experiences encountered by cybersecurity incident responders and an assessment of the subsequent impacts on their well-being. Additionally, this study sought to draw comparisons between the experiences of cybersecurity incident responders and their counterparts in traditional emergency response roles. Semi-structured interviews were conducted with a cohort of 22 individuals with first-hand experience working …

Machine Learning For Electronic Design Automation: Specification Mining And High-Level Synthesis, Md Rubel Ahmed

USF Tampa Graduate Theses and Dissertations

The rapid growth of complex system-on-chip (SoC) designs has presented unprecedented opportunities and challenges in electronic design automation (EDA). This dissertation explores two facets of electronic design automation: message flow specification mining using data mining and natural language processing (NLP) and high-level synthesis (HLS) acceleration using different machine learning (ML) methods. It also discusses an ML model co-optimization method for energy-efficient hardware implementation.

Effective SoC design validation relies heavily on message flow specifications. This dissertation presents an efficient technique for synthesizing finite state automaton (FSA) models from SoC execution traces. The synthesized models can provide valuable insights into the on-chip …

Influence Of Thickness And Capping Materials On The Static And Dynamic Properties Of Ferrimagnetic Thin Films, Noha Alzahrani

USF Tampa Graduate Theses and Dissertations

Spintronics traditionally relied on ferromagnetic materials for their strong spin properties but facedissues like large stray magnetic fields. To address these challenges, researchers turned to antiferromagnetic materials with fast spin dynamics, due to their zero net magnetic moment but the lack of a net spin moment complicated operation. In this context, ferrimagnetic materials have emerged as promising alternatives. They combine ferromagnetic and antiferromagnetic traits and feature different magnetic ions in their sublattices. This dissertation explores how film thickness and capping materials affect the properties of ferrimagnetic thin films. Rare-earth transition metal ferrimagnetic amorphous alloys have garnered attention in the realm …

Refining The Machine Learning Pipeline For Us-Based Public Transit Systems, Jennifer Adorno

USF Tampa Graduate Theses and Dissertations

According to the Population Division of the United Nations, in the United States, almost 90% of the population will live in urban areas by the year 2050. As the population in a given area increases, higher traffic congestion follows due to an increase of vehicles in the road. A possible way to alleviate congestion could be with widespread use of public transit. However, according to the US Census Bureau, the percentage of individuals commuting through public transportation has been decreasing steadily over time, and the American Community Survey reports that during 2019, only around five percent of the US population …

Optimizing The Dynamic Replacement Of Soft Soils With Sand Using A Fem Tools, Walid Salem A Elsiwi

USF Tampa Graduate Theses and Dissertations

First a dynamic finite element methodology (FEM) was developed to simulate an entire dynamic replacement (DR) program of clay with sand involving multiple poundings. The main objective of this research was to employ FEM and geotechnical test data such as cone penetration test (CPT) data at the site to predict the maximum achievable sand column (SC) depth and the corresponding optimum levels of attributing parameters such as number and height of pounder drops. Another goal was to predict the pore pressure generated in clay due to pounding. A full-scale ground improvement project was used to guide the analytical process. Comparison …

Big Data Analytics For Healthcare Social Media: New Algorithms And Insights, Negar Maleki

USF Tampa Graduate Theses and Dissertations

Over the last two decades, there has been a rapid evolution in information and communication technology, including the emergence of social media. Social media has a significant impact on various fields such as politics, business, culture, education, careers, innovation, and especially healthcare. This influence is not a new phenomenon since a survey from ten years ago showed that up to 78\% of American adults used the internet to look for health-related information for themselves or someone else. With the shift towards on-demand services in society, healthcare is also affected by this trend. Instead of waiting for weeks or months to …

Human Vs Machine: Hyper-Realistic Avatars And Their Efficacy As A Communication Channel, Jill S. Schiefelbein

USF Tampa Graduate Theses and Dissertations

Hyper-realistic avatars (HRAs), a form of synthetic media, are custom-created digital embodiments of a human, created by capturing and combining that person’s video and vocal likeness. This is the first known study of the efficacy of videos delivered by hyper-realistic avatars as a communication channel in comparison to videos delivered by their human counterparts. An experiment testing how information retention, engagement, and trust vary between viewers of videos delivered by a real human, videos delivered by the HRA representing that same human, and videos delivered by the HRA that discloses to viewers that it is a hyper-realistic avatar is presented. …

Utilizing Binding-Based Proteomic Profiling And Mass Spectrometry Imaging As Innovative Tools For Lipid Research, Suzeeta Bhandari

USF Tampa Graduate Theses and Dissertations

Mass spectrometry-based omics research involves global identification and quantification of molecules in the biological system, which can form the basis of the multi-omics approach integrating multiple layers of information to provide a comprehensive overview of systems biology. The investigation of fatty acid amides (FAA) is one such research avenue that benefits significantly from the high-throughput, multi-level, and interdisciplinary approach of integrative omics. Currently, FAA research is dominated by lipidomic-based studies that have successfully identified and quantified >100 different FAAs in different model systems. Few studies are credited with exploring the biological function and evolution of FAA-dependent signaling pathways. Previous literature …

Trace Metal Cycling During Phytoplankton Growth In The Southern Ocean, North Pacific, And Tampa Bay, Shannon Michelle Burns

USF Tampa Graduate Theses and Dissertations

The trace metals iron (Fe), manganese (Mn), cobalt (Co), nickel (Ni), copper (Cu), zinc (Zn), and cadmium (Cd) are essential to primary production in the oceans. They act as micronutrients, used in intracellular enzymes for macronutrient acquisition, light harvesting, and mediation of reactive oxygen species. In some cases, they can also substitute for each other when a primary trace metal micronutrient is depleted. Characterizing the interplay amongst trace metals, macronutrients, and phytoplankton growth is vital for understanding the biogeochemical underpinnings of primary production, and for modelers who develop biological pump frameworks for global carbon cycling.

In Chapter two, I investigated …

Investigating Mobility In The Northern Balkans During The Fifth Millenium Bc Through Strontium Analysis Of Human Tooth Enamel, Aurélien Tafani

USF Tampa Graduate Theses and Dissertations

This research investigates how individual mobility among ancient populations in Romania during the Eneolithic, between 5000 and 4000 BC, may be related to the spread of the material culture known as Kodjadermen-Gumelniţa-Karonovo VI (KGK VI) that extended over most of southern Romania and Bulgaria. This work seeks to combine results on individual mobility with other lines of archaeological evidence to provide a better understanding of the social context and kinship relationships that were in place when these events took place.

Strontium isotopic analyses were performed on 130 individuals from two sites located in the southern Romania: 49 from Sultana and …

Using Social Network Analysis To Measure And Visualize Student Clustering Within Middle And High Schools, Geoffrey David West

USF Tampa Graduate Theses and Dissertations

The dominant philosophy of American public schools has been to group students together based on similar characteristics. Known as tracking, high achieving students would take courses on the “college track” while others would take “career track” courses. It was not long until advocates noticed that this process unfairly advantaged affluent and White student over poor and minoritized groups. A new process called “ability grouping” took over where tracking left off, but to the same effect. It is difficult to measure the degree students are grouped together by a certain characteristic, and while a few research papers aim to do so, …

Deciphering Trends And Tactics: Data-Driven Techniques For Forecasting Information Spread And Detecting Coordinated Campaigns In Social Media, Kin Wai Ng Lugo

USF Tampa Graduate Theses and Dissertations

The main objective of this dissertation is to develop models that predict and investigate the spread of information in social media over time. In this context, we consider topics of discussions as the information that spreads. Thus, we are interested in forecasting the number of messages per day in a future interval of time. We take a data-driven approach, in which we compare our results with real datasets from a multitude of socio-political contexts and from multiple social media platforms, specifically, Twitter and YouTube.

We identified a number of challenges related to forecasting social media time series per topic. First, …

Coupling Chemical And Genomic Data Of Marine Sediment-Associated Bacteria For Metabolite Profiling, Stephanie P. Suarez

USF Tampa Graduate Theses and Dissertations

Marine sediment-associated bacteria house many new and exciting novel secondary metabolites. These metabolites can be tested for bioactivity against various types of cancer and fungal, bacterial, and viral infections. In this thesis, we investigated the combination of biosynthetic gene cluster information with mass spectra to perform a chemical profiling of sediment- associated bacteria. Furthermore, we utilized a scoring technique to provide an identification and confidence score to each annotated compound. The sediment was collected from east Arthur Harbor, Palmer Station, Antarctica, at depths of 20 ft and 60 ft. After plating on agar, 52 unique bacterial strains were isolated, with …

Examining Paleoshorelines In The Eastern Gulf Of Mexico: Insights On Sea Level History And Potential Areas Of Interest For Habitat Management, Catalina Rubiano

USF Tampa Graduate Theses and Dissertations

An inventory of multibeam bathymetry containing relict drowned and lithified paleoshorelines has been compiled and analyzed in the first ever shelf-wide investigation of paleo sea level indicators on the west Florida shelf (WFS). On the largest scale, the WFS is a wide and gently sloping terrain that is characterized by a carbonate-rich sediment regime. This framework coupled with the region’s tectonic stability provided a setting in which sea level changes since ~ 20 ka have been recorded to a remarkable degree of resolution in the form of paleoshorelines which formed at sea level and were subsequently drowned and preserved in …