Physical Sciences and Mathematics Commons^™

On Simes’S Second Conjecture: An Extended Single-Step Simes Test Procedure For Multiple Testing, Matthew G. Hudson

Dissertations

One of the major concerns with multiple tests of significance is controlling the family wise error rate. Various methods have been developed to ensure that the false positive rate be maintained at some prespecified level. One of the most well know being the Bonferroni procedure. Simes presented an improved Bonferroni procedure for testing the global hypothesis that is more powerful and less conservative, especially with positively correlated tests. While Simes’s procedure is more powerful, it does not allow for making inferences on the individual hypotheses. However, the Simes procedure has since become the foundation of many p-value based multiple testing …

Cost-Effective Gnss Hardware For High-Accuracy Surveys And Its Prospects For Post-Processed Kinematic (Ppk) And Precise Point Positioning (Ppp) Strategies, Johnson Olusegun Oguntuase

Dissertations

This dissertation determines for the first time the vertical accuracy achievable with low-cost mass-market multi-frequency, multi-GNSS (LM3GNSS) receivers, and antennas in the context of Ellipsoid Reference Survey (ERS), usually employed in bathymetric operations aboard survey platforms. LM3GNSS receivers are relatively new in the market, and their emergence is driven by the automobile industry and several mass-market applications requiring location-based solutions at high accuracies. It is foreseeable that emerging hydrographic survey platforms such as autonomous surface vehicles, small unmanned aircraft, crowd-sourced bathymetric platforms, and offshore GNSS buoy will find LM3GNSS receivers attractive since they are power- and cost-effective (often less than …

Enhancement Of Critical Current In High-Temperature Superconductors By Ion Beam Irradiation Induced Defects, Prashanta Mani Niraula

Dissertations

Particle irradiation is used to induce defects in high-temperature superconducting Y₁Ba₂Cu₃O_7-x (YBCO) coated conductors, containing predominantly c-axis oriented barium zirconate (BZO) nanorods as pre-existing vortex pinning defects. Samples are irradiated with 50.0 MeV Cu ions with doses of 2.5 x 10¹², 2.0 x 10¹², 1.5 x 10¹², 1.0 x 10¹², 0.75 x 10¹², 0.5 x 10¹², 0.05 x 10¹² ions/cm². The dose of 0.5 x 10¹² ions/cm² is found to be the optimal dose with a …

Monitoring Salt Diapir Related Land Deformation And Distribution: A Geophysical And Remote Sensing Approach Jazan Province, Saudi Arabia, Hannah G. Pankratz

Dissertations

Salt diapirs are rarely preserved on the surface and seldom considered as environmental hazards. The Jazan city diapir (JZD) is located in southwest Saudi Arabia along the Red Sea coastal plain and outcrops in the middle of a rapidly growing port city. The intrusion of the diapir (~ 2 km²) into the overburden sediments continues to cause uneven surfaces, compromises building foundations and infrastructure, caused dissolution sinkholes, and limits the expansion of the city along the coastline. This research aims to better understand the distribution and deformation associated with salt diapirs in arid environments.

Using integrated Interferometric Synthetic …

A Management Strategy Evaluation Of The Impacts Of Interspecific Competition And Recreational Fishery Dynamics On Vermilion Snapper (Rhomboplites Aurorubens) In The Gulf Of Mexico, Megumi C. Oshima

Dissertations

In the Gulf of Mexico (GOM), Vermilion Snapper (Rhomboplites auroruben), are believed to compete with Red Snapper directly for prey and habitat. The two species share similar diets and have significant spatial overlap in the Gulf. Red Snapper are thought to be the dominate competitor, forcing Vermilion Snapper to feed on less nutritious prey when local resources are depleted. In addition to ecological pressures, GOM Vermilion Snapper support substantial commercial and recreational fisheries. Over the past decade, recreational landings have steadily increased, reaching a historical high in 2018. One cause may be stricter regulations for similar target species such as …

A Spectroscopic And Photometric Survey Of The W4 Hii Region And Its Young Stellar Population, Matt Wentzel-Long

Dissertations

The W4 HII region is home to a large number of O and B-type stars as well as the young open cluster IC 1805. OB-type produce intense photoionizing radiation and stellar winds that can induce star formation in surrounding molecular clouds and sometimes carve out large regions of decreased particle density called superbubbles. During the star formation process, young stellar objects (YSOs) are initially surrounded by circumstellar disks made of gas and dust which naturally dissipate after several million years. The dissipation of the disk is thought to occur for a variety of reasons, including photoevaporation by the encompassed protostar …

Stochastic Delay Differential Equations With Applications In Ecology And Epidemics, Hebatallah Jamil Alsakaji

Dissertations

Mathematical modeling with delay differential equations (DDEs) is widely used for analysis and predictions in various areas of life sciences, such as population dynamics, epidemiology, immunology, physiology, and neural networks. The memory or time-delays, in these models, are related to the duration of certain hidden processes like the stages of the life cycle, the time between infection of a cell and the production of new viruses, the duration of the infectious period, the immune period, and so on. In ordinary differential equations (ODEs), the unknown state and its derivatives are evaluated at the same time instant. In DDEs, however, the …

Synthesis Of Biologically Active Phosphorus Heterocycles, Giri Gnawali

Dissertations

This dissertation work is divided into two parts. The first part is focused in the development of methodology for the synthesis of phostones and phosphonosugars and advancement thereof. The second part is focused in the development of affinity probes based on analogs of natural products cyclophostin and the cyclipostins.

Phostone (3) and phosphonosugars are cyclic phosphonates. The anomeric carbon of sugar is replaced by a phosphorus atom. The synthesis of phostones has been achieved starting form the key intermediate, γ,δ-epoxy vinyl phosphonate (1). The palladium catalyzed ring opening of γ,δ-epoxy vinyl phosphonates by a nucleophile results …

Efficient Time-Stepping Approaches For The Dispersive Shallow Water Equations, Linwan Feng

Dissertations

This dissertation focuses on developing efficient and stable (high order) time-stepping strategies for the dispersive shallow water equations (DSWE) with variable bathymetry. The DSWE extends the regular shallow water equations to include dispersive effects. Dispersion is physically important and can maintain the shape of a wave that would otherwise form a shock in the shallow water system.

In some cases, the DSWE may be simplified when the bathymetry length scales are small (or large) in relation to other length scales in the shallow water system. These simplified DSWE models, which are related to the full DSWEs, are also considered in …

Hybrid Deep Neural Networks For Mining Heterogeneous Data, Xiurui Hou

Dissertations

In the era of big data, the rapidly growing flood of data represents an immense opportunity. New computational methods are desired to fully leverage the potential that exists within massive structured and unstructured data. However, decision-makers are often confronted with multiple diverse heterogeneous data sources. The heterogeneity includes different data types, different granularities, and different dimensions, posing a fundamental challenge in many applications. This dissertation focuses on designing hybrid deep neural networks for modeling various kinds of data heterogeneity.

The first part of this dissertation concerns modeling diverse data types, the first kind of data heterogeneity. Specifically, image data and …

Enrichment Of Ontologies Using Machine Learning And Summarization, Hao Liu

Dissertations

Biomedical ontologies are structured knowledge systems in biomedicine. They play a major role in enabling precise communications in support of healthcare applications, e.g., Electronic Healthcare Records (EHR) systems. Biomedical ontologies are used in many different contexts to facilitate information and knowledge management. The most widely used clinical ontology is the SNOMED CT. Placing a new concept into its proper position in an ontology is a fundamental task in its lifecycle of curation and enrichment.

A large biomedical ontology, which typically consists of many tens of thousands of concepts and relationships, can be viewed as a complex network with concepts as …

Crowdsourcing Atop Blockchains, Yuan Lu

Dissertations

Traditional crowdsourcing systems, such as Amazon's Mechanical Turk (MTurk), though once acquiring great economic successes, have to fully rely on third-party platforms to serve between the requesters and the workers for basic utilities. These third-parties have to be fully trusted to assist payments, resolve disputes, protect data privacy, manage user authentications, maintain service online, etc. Nevertheless, tremendous real-world incidents indicate how elusive it is to completely trust these platforms in reality, and the reduction of such over-reliance becomes desirable.

In contrast to the arguably vulnerable centralized approaches, a public blockchain is a distributed and transparent global "consensus computer" that is …

Mathematical Models And Tools To Understand Coupled Circadian Oscillations And Limit Cycling Systems, Guangyuan Liao

Dissertations

The circadian rhythm refers to an internal body process that regulates many body processes including the sleep-wake cycle, digestion and hormone release. The ability of a circadian system to entrain to the 24-hour light-dark cycle is one of the most important properties. There are several scenarios in which circadian oscillators do not directly receive light-dark forcing. Instead they are part of hierarchical systems in which, as \peripheral" oscillators, they are periodically forced by other \central" circadian oscillators that do directly receive light input. Such dynamics are modeled as hierarchical coupled limit cycle systems. Those models usually have a large population, …

Resonant Triad Interactions In One And Two-Layer Systems, Malik Chabane

Dissertations

This dissertation is a study of the weakly nonlinear resonant interactions of a triad of gravity-capillary waves in systems of one and two fluid layers of arbitrary depth, in one and two-dimentions. For one-layer systems, resonant triad interactions of gravity-capillary waves are considered and a region where resonant triads can be always found is identified, in the two-dimensional wavevector angles-space. Then a description of the variations of resonant wavenumbers and wave frequencies over the resonance region is given. The amplitude equations correct to second order in wave slope are used to investigate special resonant triads that, providing their initial amplitude …

Machine Learning For Scientific Data Mining And Solar Eruption Prediction, Hao Liu

Dissertations

This dissertation explores new machine learning techniques and adapts them to mine scientific data, specifically data from solar physics and space weather studies. The dissertation tackles three important problems in heliophysics: solar flare prediction, coronal mass ejection (CME) prediction and Stokes inversion.

First, the dissertation presents a long short-term memory (LSTM) network for predicting whether an active region (AR) would produce a certain class of solar flare within the next 24 hours. The essence of this approach is to model data samples in an AR as time series and use LSTMs to capture temporal information of the data samples. The …

Efficient Approximations For Stationary Single-Channel Calcium Nanodomains, Yinbo Chen

Dissertations

Mathematical and computational modeling plays an important role in the study of local Ca2+ signals underlying many fundamental physiological processes such as synaptic neurotransmitter release and myocyte contraction. Closed-form approximations describing steady-state distribution of Ca2+ in the vicinity of an open Ca2+ channel have proved particularly useful for the qualitative modeling of local Ca2+ signals. This dissertation presents several simple and efficient approximants for the equilibrium Ca2+ concentration near a point source in the presence of a mobile Ca2+ buffer, which achieve great accuracy over a wide range of model parameters. Such approximations provide an efficient method for estimating Ca2+ …

Energy And Performance-Optimized Scheduling Of Tasks In Distributed Cloud And Edge Computing Systems, Haitao Yuan

Dissertations

Infrastructure resources in distributed cloud data centers (CDCs) are shared by heterogeneous applications in a high-performance and cost-effective way. Edge computing has emerged as a new paradigm to provide access to computing capacities in end devices. Yet it suffers from such problems as load imbalance, long scheduling time, and limited power of its edge nodes. Therefore, intelligent task scheduling in CDCs and edge nodes is critically important to construct energy-efficient cloud and edge computing systems. Current approaches cannot smartly minimize the total cost of CDCs, maximize their profit and improve quality of service (QoS) of tasks because of aperiodic arrival …

Global Optimization Algorithms For Image Registration And Clustering, Cuicui Zheng

Dissertations

Global optimization is a classical problem of finding the minimum or maximum value of an objective function. It has applications in many areas, such as biological image analysis, chemistry, mechanical engineering, financial analysis, deep learning and image processing. For practical applications, it is important to understand the efficiency of global optimization algorithms. This dissertation develops and analyzes some new global optimization algorithms and applies them to practical problems, mainly for image registration and data clustering.

First, the dissertation presents a new global optimization algorithm which approximates the optimum using only function values. The basic idea is to use the points …

Changing The Focus: Worker-Centric Optimization In Human-In-The-Loop Computations, Mohammadreza Esfandiari

Dissertations

A myriad of emerging applications from simple to complex ones involve human cognizance in the computation loop. Using the wisdom of human workers, researchers have solved a variety of problems, termed as “micro-tasks” such as, captcha recognition, sentiment analysis, image categorization, query processing, as well as “complex tasks” that are often collaborative, such as, classifying craters on planetary surfaces, discovering new galaxies (Galaxyzoo), performing text translation. The current view of “humans-in-the-loop” tends to see humans as machines, robots, or low-level agents used or exploited in the service of broader computation goals. This dissertation is developed to shift the focus back …

An Automated Feedback System To Support Student Learning Of Conceptual Knowledge In Writing-To-Learn Activities, Ye Xiong

Dissertations

As a pedagogical strategy, Writing-to-Learn (WTL) intends to use writing to improve students’ understanding of course content. However, most of the existing feedback systems for writing are mainly focused on improving students’ writing skills rather than their conceptual development. In this dissertation, an automatic approach is proposed to generate timely, actionable, and individualized feedback based on comparing knowledge representations extracted from lecture slides and individual students’ writing assignments. The novelty of the proposed approach lies in the feedback generation: to help students assimilate new knowledge into their existing knowledge better, their current knowledge is modeled as a set of matching …

1,4-Dioxane Biodegradation In Propanotrophs: Molecular Foundations And Implications For Environmental Remediation, Li Fei

Dissertations

1,4-Dioxane (dioxane) has emerged with an escalating concern given its human carcinogenicity and widespread occurrence in groundwater. Bioremediation is promising as an effective and cost-efficient treatment alternative for in situ or ex situ cleanup of dioxane and co-existing pollutants in the field. Soluble di-iron monooxygenases (SDIMOs) are reputed for their essential roles in initiating the cleavage of dioxane and other pollutants. In this doctoral dissertation, molecular foundations for SDIMOs-mediated dioxane biodegradation are untangled to promote the development and implication of site-specific bioremediation and natural attenuation strategies. This dissertation focused on propanotrophic bacteria given their pivotal roles in dioxane metabolism and …

Mind Maps And Machine Learning: An Automation Framework For Qualitative Research In Entrepreneurship Education, Yasser Farha

Dissertations

Entrepreneurship Education researchers often measure entrepreneurial motivation of college students. It is important for stakeholders, such as policymakers and educators, to assert if entrepreneurship education can encourage students to become entrepreneurs, as well as to understand factors that influence entrepreneurial motivation. For that purpose, researchers have used different methods and instruments to measure students' entrepreneurial motivation. Most of these methods are quantitative, e.g., closed-ended surveys, whereas qualitative methods, e.g., open-ended surveys, are rarely used.

Mind maps are an attractive qualitative survey tool because they capture the individual's reflections, thoughts, and experiences. For Entrepreneurship Education, mind maps can be utilized to …

Towards Practical Homomorphic Encryption And Efficient Implementation, Gyana R. Sahu

Dissertations

Cloud computing has gained significant traction over the past few years and its application continues to soar as evident from its rapid adoption in various industries. One of the major challenges involved in cloud computing services is the security of sensitive information as cloud servers have been often found to be vulnerable to snooping by malicious adversaries. Such data privacy concerns can be addressed to a greater extent by enforcing cryptographic measures. Fully homomorphic encryption (FHE), a special form of public key encryption has emerged as a primary tool in deploying such cryptographic security assurances without sacrificing many of the …

Flare Emission Observed In High Resolution And Comparison With Numerical Modeling, Nengyi Huang

Dissertations

As one of the most intense activities on the solar surface, flares have been extensively observed and studied ever since the first report. The standard model of solar flares has been established and commonly accepted. However, many limitations from the researching tools have left some of the problems unsolved or controversial. For example, the density of electrons in the corona is lower than it is required to activate the observed emission in HXR, and the mechanism that these electron beams can penetrate down to lower chromosphere is unclear. Many theoretical scenarios were suggested, and more observations had been in need. …

Analyzing And Assisting Patient Decision-Making In Online Health Communities, Mingda Li

Dissertations

In recent years, many users have joined online health communities (OHC) to seek information, suggestions and social support. However, little has been studied about the roles of OHCs in patients' decision-making processes. The aim of this research is to analyze OHC data to better understand patient decision-making processes, and to provide assistance to OHC users in their decision-making.

In order to analyze or assist patients in their decision-making, a novel classification model is designed to identify discussion threads in OHC that are related to decision making. This is achieved by building a two-step combined deep learning model. Empirical evaluation shows …

Exploration Of Novel Ferroelectric Systems: Determination Of The Underlying Mechanisms, Sizhan Liu

Dissertations

Modern environmental and sustainability issues, as well as the growing demand for applications in sensing and data storage, require the discovery and development of new functional materials. Ferroelectrics and multiferroics are materials that have played a central role in this arena. Because the central function of ferroelectrics is governed by spontaneous polarization response, understanding both the electronic and atomic response to external stimuli is important. In this work, a broad set of model systems were explored to determine the fundamental mechanisms involved in the formation of the ferroelectric phase.

Understanding atomic-level changes in structure is important for improving the properties …

Graphene Based Barrier Membrane For Gas Separation Processes, Cheng Peng

Dissertations

Novel graphene oxide (GO) flake-based composite lamellar membrane structure is being developed as a potential component of a garment for protection against chemical warfare agents (CWAs) represented here by simulants, dimethyl methyl phosphonate (DMMP) (a sarin-simulant) and 2-chloroethyl ethyl sulfide (2-CEES) (a simulant for sulfur mustard), yet allowing a high moisture transmission rate. GO flakes of dimensions 300-800 nm, 0.7-1.2 nm thickness and dispersed in an aqueous suspension are formed into a membrane by vacuum filtration on a porous polyethersulfone (PES) or poly (ether-ether-ketone) (PEEK) support membrane for noncovalent π-π interactions with GO flakes. After physical compression of such a …

Accurate Patient Health Condition Identification And Risk Prediction From Health Data, Jinhe Shi

Dissertations

Online Health communities (OHCs), Electronic Health Records (EHRs) and Claims data contain rich patient information. Accurate identification of patient's health conditions is critical for providing effective and safe health care service and for trustable knowledge discovery. This dissertation proposes several deep-learning based techniques on identifying patient health conditions and predicting adverse drug event (ADE) risks using various health data.

First, this dissertation presents a novel patient experience mining model to differentiate the data expressing user experiences from the one describing hearsays. Indeed, OHCs contain information with varying degrees of quality. Identifying information that describes patient health experience from OHCs is …

Systems For Free Parking Assignment, Abeer M. Hakeem

Dissertations

Finding a free, curbside parking spaces in metropolitan areas, especially during rush hours, is difficult for drivers. The difficulty arises from not knowing where the available spaces may be at that time; and, even if the spaces are known, many vehicles may pursue the same spaces, causing serious parking contention and traffic congestion. This dissertation presents three cost-effective and easily deployable free parking assignment systems that optimize the travel time of the drivers.

The first contribution is the Free Parking System (FPS), a centralized solution that solves the curbside parking problem. Unlike existing solutions, FPS is cost-effective, as it does …

Modeling Strategies For Structures Using Ductile Concrete Materials In Seismic Applications, Hasan Tariq

Dissertations

High-Performance Fiber-Reinforced Cementitious Composites (HPFRCCs) have made striking advances over the last two decades as an alternative material to replace ordinary concrete in regions of high seismic intensities. In contrast to ordinary concrete which has a brittle tensile response, HPFRCCs exhibit tensile strain hardening and multiple crack propagation. The application of HPFRCC in various structural components demonstrate effectiveness by improving damage resistance, deformation capacity, and energy absorption capacity. Despite these benefits, the failure mode of reinforced HPFRCC components is dominated by reinforcement fracture unlike traditional reinforced concrete components which fail in flexure by crushing. The unique behavior of HPFRCC members …