Physical Sciences and Mathematics Commons^™

To Bee Or Not To Bee: Investigating Pesticide Behavior Inside And Outside Of Semi-Field Cages, Mallory Bingham

Undergraduate Honors Capstone Projects

Bees play an important role in ecosystems and food production through pollination. One such bee, the alfalfa leaf cutting bee (ALCB) is a very efficient pollinator and is essential in alfalfa seed production. However, bees face increasing harm, most notably due to the deleterious effect of pesticides used in agriculture, and much research is dedicated to investigating the extent of effects that pesticides have on different bee populations. One common tool used to study the effects of pesticide exposure on bees is semi-field cages. These cages have some key advantages, such as restricting bee foraging to plots sprayed with pesticides …

Data Science For Engineers, Heidi Moulton

Undergraduate Honors Capstone Projects

Undergraduate research is a core pillar of Utah State University’s College of Engineering. Many students become involved with research during their Junior and Senior years and begin to generate various forms of data. Most students, however, have received little formal education on how to process data, and there are currently no readily available resources within the College of Engineering. As a Mechanical Engineering and Data Science double major, I found the data processing techniques I learned in my Data Science courses invaluable as an undergraduate researcher, and now as a Mechanical Engineer at Apogee Instruments, I frequently draw upon these …

Geometric Algebra For Field Theory In Curved Spacetime, Kevin Rhine

All Graduate Reports and Creative Projects, Fall 2023 to Present

Physics seeks to understand the universe by uncovering the fundamental laws that govern matter, energy, space, and time. At its heart lies the challenge of unification: finding a mathematical framework that consistently describes these interactions across all scales, from the subatomic to the cosmological.

This thesis explores geometric algebra, a mathematical language that unifies algebra and geometry, as a tool for advancing this understanding. By extending this framework to curved spacetimes, where gravity influences the structure of space and time, we investigate its ability to describe physical phenomena such as electromagnetism and general relativity. A notable contribution includes the geometric …

Aleci: An R Package For Non-Parametric Confidence Intervals On Accumulated Local Effects Plots, Matthew R. Lister

All Graduate Reports and Creative Projects, Fall 2023 to Present

Machine learning models can take a collection of inputs and craft an output. The mathematical formulas these models use to calculate their outputs easily become too complex or time consuming for a human to analyze. Collectively, we refer to these as black box models. Accumulated local effects plots (ALE) are a method for adding interpretability and visibility into the effects that individual variables contribute to the predictions made by black box models. The method designed by D.W. Apley calculates equally spaced point estimates of the response value to construct a graph across the range of the variable of interest. AleCI …

Gravity Wave Breaking Over Northern Utah With An Advanced Mesospheric Temperature Mapper And Sodium Lidar, Eric Davis

All Graduate Reports and Creative Projects, Fall 2023 to Present

Considerable progress has been made in recent decades in the understanding of gravity wave (GW) dynamics. However, there remain important aspects and effects that are poorly understood. In particular, the coupling and deposition of their energy and momentum into the mesosphere lower thermosphere (MLT) region and the interaction and instability dynamics that are directly associated with GW breaking. Using an Advanced Mesosphere Temperature Mapper (AMTM) several strong wave breaking events were observed in the summer of 2015 at USU’s BLO research station. These events have exhibited high momentum fluxes and associated strong wave breaking, prompting detailed data analyses. Rossby waves, …

Managing For Disturbance: Trade-Offs Associated With Population Resilience And Ecosystem Size, Ellie Wallace

All Graduate Theses and Dissertations, Fall 2023 to Present

Populations can recover from and withstand disturbance through characteristics such as reproduction and maintaining large abundances. While these traits are beneficial to native species conservation, they can simultaneously challenge effective invasive species management. Effective invasive species control requires sufficient efforts to overcome a population's ability to recover from disturbance, such as harvest. My dissertation aimed to address how the size of an invasive population and its ability to recover from disturbance impact a suite of invasive species control methods, including those that (1) target mainly larger and older individuals (i.e., mechanical removal), (2) target all sizes of individuals (i.e., targeted …

Conservation Laws For Asymptotically Perfect Fluid Spacetimes, Lyle Arnett Jr.

All Graduate Theses and Dissertations, Fall 2023 to Present

In physics, conservation laws, like those for energy or momentum, are powerful tools that help us understand how systems evolve and interact. In general relativity, where spacetime itself is curved by matter and energy, defining such conservation laws becomes especially subtle and complex. Traditional methods rely on idealized conditions like empty space or special symmetries, which limit their usefulness in more realistic, dynamic settings such as an expanding universe.

This dissertation explores a modern mathematical framework, developed by Iyer and Wald, that allows conservation laws to be derived directly from the equations governing spacetime. Using this approach, I examine not …

Near-Earth Object (Neo) Surveyor Development: Challenges And Opportunities In Support Of Planetary Defense, G. Loftus, B. Carlsen, P. Scott, S. Backlund, L. Reinhart, T. Martin, T. Hoenes, R. Burgon, S. Ashby, J. Peterson, B. Lamborn, J. Bowman

Space Dynamics Laboratory Publications

The Near-Earth Object (NEO) Surveyor mission is a key element in our future planetary defense portfolio, which will survey our solar system in the infrared to discover and characterize asteroids and comets.

The mission is designed to detect, track, and characterize small bodies throughout our solar system. By United States Congress mandate, NASA must discover more than 90% of all asteroids and comets that are larger than 140 meters in diameter and could potentially impact Earth. NEO Surveyor will provide critical decision support for stakeholders who must assess the risks of NEO impacts to Earth and identify potential mitigation strategies. …

Contrastive Representation Learning For Highly Imbalanced Multivariate Time Series With Extreme Instance Strategy, Onur Vural

All Graduate Theses and Dissertations, Fall 2023 to Present

Time series data refers to a sequence of data points collected or recorded at regular time intervals. In many fields including space weather, healthcare, and finance, predicting events from such data is crucial because these predictions can help protect infrastructures, improve healthcare outcomes, and forecast financial trends. However, one challenge in working with time series data is the presence of rare events, which are often underrepresented in the data. This imbalance makes it difficult for traditional prediction methods to provide accurate results, as they tend to focus more on the more frequent events and overlook the rare ones. To tackle …

Laboratory Earthquakes In Heterogeneous, Meter-Scale Faults: Collaborative Research With Utah State University, And University Of Texas At Austin, Srisharan Shreedharan

Funded Research Records

No abstract provided.

Climate Prediction As An Adaptive Force-Multiplier: Reasons For Hope In A Rapidly Changing World, Matthew D. Laplante

All Graduate Theses and Dissertations, Fall 2023 to Present

It's not unreasonable to feel pessimistic about our future under climate change. But "believing the science" doesn't require you to accept that we are headed toward apocalypse. It is true that human-caused climate change is real, it is underway, and our societies face many increased risks because of it. But that's just part of what climate science tells us about our future world. This same field is responsible for the recent and rapid development of tools and techniques that permit the identification of patterns in our oceans and atmosphere that will aid us in making increasingly accurate predictions about climate—the …

Describing Functionality In Natural Language May Improve Decomposition Behaviors, Matthew R. Burns

All Graduate Theses and Dissertations, Fall 2023 to Present

Problem decomposition—the ability to break complex problems into simpler parts—is a critical skill for computer programming that many beginning students struggle to develop. This research examines how using natural language to describe program functionality can help students develop better problem-solving approaches.

We created a tool called ”Natural Language Functions” (NLFs) that allows students to write descriptions of what they want their code to do in plain English, which then generates working Python functions. We studied how students used this tool compared to students who solved programming problems in traditional ways.

Our findings show that students who used the NLFs tool …

Advancing Multi-Agent Robotics Simulations Through Heterogeneous Reinforcement Learning In Isaaclab, Jacob R. Haight

All Graduate Theses and Dissertations, Fall 2023 to Present

Robots increasingly operate in collaborative teams across domains such as search-and- rescue, warehouse automation, and autonomous driving—scenarios that demand advanced coordination strategies enabled by multi-agent reinforcement learning (MARL). However, existing simulation frameworks often struggle to balance realism, speed, and scalability, especially when supporting diverse, heterogeneous robot teams. This research extends Isaac Lab, a high-performance robotics simulator, by integrating heterogeneous-agent reinforcement learning (HARL) capabilities. The result is a flexible and GPU-accelerated platform for training both homogeneous and heterogeneous robot teams in complex, physics-based environments. These enhancements significantly narrow the gap between simulation and real-world deployment for multi-robot systems.

Potamogeton Crispus Invasion: Impacts On Native Aquatic Plants And Associated Faunal Habitat, Meghan-Grace Slocombe

All Graduate Theses and Dissertations, Fall 2023 to Present

Aquatic invasive plants are non-native plants that invade a water body and displace native aquatic plants. Invasion depletes the native plant community's ability to provide ecosystem services, including improved water quality, decreased problematic algae, and increased animal habitat. The loss of these ecosystem services reduces the value of fishing, boating, and swimming opportunities in aquatic ecosystems. The potential changes in plant communities and services are particularly important at sites targeted for restoration because project goals typically include increasing ecosystem services, including wildlife habitat. Curly-leaf pondweed (Potamogeton crispus L.) is a problematic invasive species in North America. To better manage …

Designing Accessible And Dependable Tools For Vocational Rehabilitation Data Analysis, Ruth E. Taylor

All Graduate Theses and Dissertations, Fall 2023 to Present

Since 1973, the U.S. Rehabilitation Services Administration (RSA) has partnered with state vocational rehabilitation (VR) agencies to help individuals with disabilities achieve meaningful employment and independence. RSA-911 datasets play a crucial role in this effort by capturing detailed participant data, but their complexity can hinder effective analysis.

To simplify this process, we present an R software package to streamline the cleaning and analysis of RSA-911 and Transition Readiness Toolkit (TRT) data, a new measure of program effectiveness. We also deliver a user-friendly dashboard, empowering both VR researchers and counselors with the opportunity to conduct analyses. Using our developed tools, we …

Development Of Saddlepoint Methodologies For Sparse Sample Multiple Parameter Generalized Linear Models And Correlated Data Scenarios, Christopher Johnson

All Graduate Theses and Dissertations, Fall 2023 to Present

Parameter estimation using maximum likelihood techniques may be biased when sample sizes are small, event rates are low, or otherwise sparse counts exist in a parametric model. This in turn may lead researchers to draw invalid statistical conclusions when conventional methods are utilized. The saddlepoint approximation has potential to lessen the degree of bias in sparse data conditions through its use of moments beyond the mean and variance, which allows for more accurate approximations using a smaller number of observations. We propose two novel saddlepoint methods for use in practical analysis scenarios, as an alternative to maximum likelihood estimation. First, …

A Survey Of Master's Qualifying Exam Practices And Content In Real Analysis, Zachary M. Coverstone

All Graduate Theses and Dissertations, Fall 2023 to Present

Graduate programs in mathematics are intended to develop experts in mathematics. As part of a graduate program, many students are expected to engage in a qualifying examination that can serve myriad purposes. This dissertation investigates real analysis qualifying examinations at the master's level through a nation-wide survey of institutions in the Association of Public and Land-Grant Universities (APLU). This study reveals the practices in administration of real analysis qualifying exams, institutions reported offering traditional, pencil-and-paper exams and generally asked students to prepare individually using previously administered exams. The survey results show that approximately two in three APLU institutions offering master's …

Determining The Structure And Function Of Type Iv-A Anti-Crisprs, Olivine Redman

All Graduate Theses and Dissertations, Fall 2023 to Present

Bacteria face a constant existential threat in the form of infection by viruses along with other forms of mobile genetic elements, such as bacteriophage and transposable elements. To survive, bacteria and other prokaryotes have evolved various immune systems to evade these would-be invaders. One such immune system is the CRISPR-Cas system, an adaptive immune system able to record the genetic signature of invading viruses in order to recognize and destroy them should they be encountered again in the future. In this thesis I present data that sheds light on the mechanism of one particular subtype of CRISPR-Cas systems: the type …

Measuring Small Currents At Fast Speeds Using A 2nd Generation Electrometer, Donna Metcalf

Physics Capstone Projects

This project presents the development of a second-generation electrometer designed to measure extremely low currents with improved speed and sensitivity. Based on the foundational architecture developed by Vladimir Zavylov, this iteration focuses on enhancing performance through optimized circuit components, modular configuration, and a custom-designed, battery- powered power supply that enables high-voltage floating measurements. The work encompasses the complete design cycle—creating a full schematic, developing a tailored power delivery system, assembling printed circuit boards (PCBs), constructing wiring harnesses, and integrating components into a protective housing.

One Size Doesn’T Fit All: Towards Design And Evaluation Of Developmentally Appropriate Parental Control Tool, Prakriti Dumaru, Mahdi Nasrullah Al-Ameen

Computer Science Student Research

As children progress through developmental stages, they undergo substantial biological, cognitive, and social changes, creating unique needs for online safety across different age groups (e.g., young children, tweens, teens). The existing parental control tools fail to account for these differences, leaving a notable gap in the literature on parental mediation. To this end, we conducted 10 focus group sessions with a total of 20 parents to understand their preferences for age-appropriate design components that promote self-regulation and open communication, followed by an ideation workshop with four UX design experts to translate these preferences into customized features. We then evaluated these …

Young Professionals, Zachary Gibson

Journal Articles

Like many of us, I have attended numerous panels, seminars, and workshops geared toward helping young professionals and students. The more senior professionals are gathered for us to question and tap them for wisdom and anecdotes. One such question that inevitably comes up in one form or another is, “How did you get to where you are?” A thinly veiled question intending to ask how can one get to the same or similar position. The response often begins with a soft chuckle and a “well … ” Their answers are caveated by “my path was not the typical path.”

Diverse Dust Sources And Warming Trigger Cyanobacteria Abundance In Freshwater Ecosystems In The Western United States, Juan Manuel González-Olalla, Janice Brahney

Watershed Sciences Faculty Publications

The rise in global temperature and the increase in atmospheric transport and deposition of dust linked to greater aridity, land abandonment, and wildfires, are placing significant stress on freshwater microbial communities. Temperature increases and the nutrients contained in the dust may independently and together alter the metabolism and structure of these communities. However, dust chemistry is widely variable, and pre-existing lake conditions will likely influence the response of the algal and microbial communities to added nutrients and temperature stress. To fill this gap of knowledge, we tested the metabolic and structural response of phytoplankton in two aquatic ecosystems in the …

Rapid Flips Between Warm And Cold Extremes In A Warming World, Sijia Wu, Ming Luo, Gabriel Ngar-Cheung Lau, Wei Zhang, Lin Wang, Zhen Liu, Lijie Lin, Yijing Wang, Erjia Ge, Jianfeng Li, Yuanchao Fan, Yimin Chen, Weilin Liao, Xiaoyu Wang, Xiaocong Xu, Zhixin Qi, Ziwei Huang, Faith Ka Shun Chan, David Yongqin Chen, Xiaoping Liu, Tao Pei

Plants, Soils, and Climate Faculty Publications

Rapid temperature flips are sudden shifts from extreme warm to cold or vice versa–both challenge humans and ecosystems by leaving a very short time to mitigate two contrasting extremes, but are yet to be understood. Here, we provide a global assessment of rapid temperature flips from 1961 to 2100. Warm-to-cold flips favorably follow wetter and cloudier conditions, while cold-to-warm flips exhibit an opposite feature. Of the global areas defined by the Intergovernmental Panel on Climate Change, over 60% have experienced more frequent, intense, and rapid flips since 1961, and this trend will expand to most areas in the future. During …

James Buttle Review: Bed, Banks And Beyond: River Flood Dynamics, Ellen Wohl, Julianne Scamardo, Ryan R. Morrison

Watershed Sciences Faculty Publications

Floods are amplified and attenuated by features and processes across spatial scales, defined here as flood dynamics. We review and synthesise these influences at the catchment, river network and reach scales as a means of integrating understanding of controls on flood dynamics and identifying key questions that arise because of differences in techniques of investigation and disciplinary emphases between spatial scales. Catchment-scale influences include catchment area, topography, lithology, land cover, precipitation, antecedent conditions and human alterations such as changing land cover. Network-scale influences on flood dynamics include network topology, longitudinal variations in the geometry of successive river corridor reaches, lakes …

Using Trail Cameras To Detect Small Mammals, S. Nicole Frey

All Current Publications

Traditional methods to detect wildlife, including nuisance animals, are not often successful at detecting small mammals. By modifying the deployment of trail cameras, including using a portable tunnel, we have successfully developed a "small mammal method" that has been used to inventory animals at Zion National Park and Cedar Breaks National Monument. We provide details on how to modify simple trail camera deployment. We also provide detailed instructions on how to create a portable small mammal tunnel to improve species detection and identification.

Inconsistencies With The Drumian Carbon Isotope Excursion (Dice) In West-Central Utah, Michelle Norman

Student Research Symposium

Geologic Setting

• During the Cambrian Period (539-485.4Ma), the western US was submerged by a shallow ocean
• Carbon cycle fluctuations in stable carbon were preserved in marine sediments
• One such period of geologic time, the Drumian Age (500Ma), is defined by the first appearance of a deepwater trilobite, P. atavus, in west-central Utah
• Researchers have hypothesized we can find Drumian-aged rocks without the fossils using carbon cycle fluctuations preserved in limestone
• the Drumian Carbon Isotope Excursion (DICE) is defined as a -2.5‰ fluctuation in global carbon-bearing rocks

Data Science For Engineers, Heidi Moulton

Student Research Symposium

30% of USU undergraduate students participate in some sort of research, and for engineering students this often means generating large amounts of data.

Data Science for Engineers is a series of four modules that introduce students to data processing, visualization, and graphing in the Python programming language using Pandas DataFrames and Juypter Notebooks.

The modules are intended for students with a basic understanding of programming in Python, specifically those who have taken CS 1400 Introduction to Computer Science.

The Stem Gender Gap: Can It Be Closed?, Makenna Roberts

Student Research Symposium

Introduction

While many industries have achieved gender parity, women remain underrepresented in STEM fields, with participation stagnating between 32% and 35% from 2011 to 2021. Research suggests this gap is influenced by relative cognitive strengths and social/societal factors. This study analyzes two datasets: (1) SAT score report data from the National College Board and (2) employment data from the 2021 NCSES Survey of Recent College Graduates. Findings highlight disparities at the highest percentiles and lower workforce participation among female STEM graduates.

To Bee Or Not To Bee: Investigating Pesticide Behavior Inside And Outside Semi-Field Cages, Mallory Bingham

Student Research Symposium

Background

Pesticides are vital in preventing crop damage from pests but are cited as a key factor in decreasing bee populations.¹ The alfalfa leaf cutting bee is essential in alfalfa seed production in the Western US.² Current research seeks to examine the effects of pesticides on these solitary bees to maintain healthy populations while controlling pests.³

One research tool commonly used to examine pesticide effects on bees is field-cages. Field cages are thought to simulate agroecosystem conditions while restricting bees to plots that have been sprayed with pesticides.^1,4

However, environmental conditions can be different inside and …

Measuring Small Currents At Fast Speeds Using A 2Nd Generation Electrometer, Donna Metcalf

Student Research Symposium

The Electron Emission Test (EET) chamber in the Utah State University Materials Physics Group (MPG) is used to determine the electron yield of highly insulating materials. An electrometer is employed alongside the EET chamber to measure the output current of 10-6 to 10-14 pulses of 10-7 seconds to DC duration. In previous years, a first- generation electrometer was used for these measurements. However, the introduction of a new electrometer presents an opportunity to achieve faster measurement speeds and improved sensitivity to smaller current values.