Physical Sciences and Mathematics Commons^™

Sparse Neural Network To Enhance Performance Under Limited Parameter Constraints., Nailah Rawnaq

Graduate Theses and Dissertations

Over the past decade, the widespread adoption of deep neural networks has been a breakthrough driven by significant computational advancements. Additionally, the number of parameters of those models is exponentially increasing for performing complex tasks and achieving better performance. However, in most practical cases, often there are constraints in the number of parameters due to limited resources in storage size and computational cost. Network pruning can lead to an optimal solution to this problem. In this thesis, I present supporting evidence to the hypothesis that higher sparsity leads to better performance for a convolution-based neural network. I perform performance studies …

Current Trends In Bee Conservation And Habitat Restoration In Different Types Of Anthropogenic Habitats, Olivia Kline, Neelendra K. Joshi

Entomology and Plant Pathology Faculty Publications and Presentations

Recent declines in bee populations and ranges have been cause for concern due to the valuable pollination service that they provide. Several factors have been proposed to contribute to these declines, including habitat loss, pathogen spread, and pesticide usage, so many pollinator conservation schemes have involved the addition of pollinator-friendly habitat through wildflower plantings and artificial nesting sites. Because of this, many efforts have been made to enhance bee populations across different landscape types, including natural, agricultural, urban, and industrial areas. Many of these schemes have focused on providing habitat for bees and other animal pollinators in agricultural landscapes, but …

Gan With Skip Patch Discriminator For Biological Electron Microscopy Image Generation, Nishith Ranjon Roy

Graduate Theses and Dissertations

GAN models have been successfully used for image generation in various sections such as real-life objects like human faces, cars, animal faces, landscapes, etc. This work focuses on biological electron microscopy (EM) image generation. Unlike other real-life objects, biological EM images are obtained through electron microscopy techniques to study biological specimens. Electron microscopy offers high resolution and magnification capabilities, making it a powerful tool for visualizing biological structures at the nanoscale. However, using GAN models for biological EM image generation poses challenges due to the complex and unique arrangements of biological structures and the sparse and asymmetrical patterns in EM …

Computational Models That Exploit Spatial, Temporal, And Voltage-Current Relationships In The Electrochemical Generation-Collection Of Redox-Active Molecules, Miguel Angel Abrego Tello

Graduate Theses and Dissertations

The numerical studies in this dissertation explore the application of redox cycling, an advanced electrochemical technique, for analyzing bioelectrochemical systems with a particular focus on small-volume samples and involves electrodes that can be activated to oxidize and reduce, separated by varying distances and featuring different geometries. The redox cycling approach facilitates the spatio-temporal interrogation of kinetics, mass transport, and the quantification and identification of chemical systems. We optimize a previously fabricated neural probe design on an SU-8 substrate, featuring coplanar arrays of nine microband electrodes suited for in vivo applications. Through comprehensive in situ and in silico redox cycling studies …

Differential Behavior Of Conformational Dynamics In Active And Inactive States Of Cannabinoid Receptor 1, Ugochi H. Isu, Adithya Polasa, Mahmoud Moradi

Chemistry & Biochemistry Faculty Publications and Presentations

Cannabinoid receptor 1 (CB1) is a G protein-coupled receptor that regulates critical physiological processes including pain, appetite, and cognition. Understanding the conformational dynamics of CB1 associated with transitions between inactive and active signaling states is imperative for developing targeted modulators. Using microsecond-level all-atom molecular dynamics simulations, we identified marked differences in the conformational ensembles of inactive and active CB1 in apo. The inactive state exhibited substantially increased structural heterogeneity and plasticity compared to the more rigidified active state in the absence of stabilizing ligands. Transmembrane helices TM3 and TM7 were identified as distinguishing factors modulating the state-dependent dynamics. TM7 …

Engineering Central Substitutions In Heptamethine Dyes For Improved Fluorophore Performance, Lei Guo, Meek Yang, Bin Dong, Seth Lewman, Alex Van Horn, Shang Jia

Chemistry & Biochemistry Faculty Publications and Presentations

As a major family of red-shifted fluorophores that operate beyond visible light, polymethine dyes are pivotal in light-based biological techniques. However, methods for tuning this kind of fluorophores by structural modification remain restricted to bottom-up synthesis and modification using coupling or nucleophilic substitutions. In this study, we introduce a two-step, late-stage functionalization process for heptamethine dyes. This process enables the substitution of the central chlorine atom in the commonly used 4′-chloro heptamethine scaffold with various aryl groups using aryllithium reagents. This method borrows the building block and designs from the xanthene dye community and offers a mild and convenient way …

Recent Advances In Magnetic Feˣ⁺/Tio₂ Microfibers For Wastewater Treatment As Climate Change Mitigation, Misriani Misriani, Yang Tian, Z. Ryan Tian

Chemistry & Biochemistry Faculty Publications and Presentations

Chemical dyeing and finishing processes used in the clothing and textile industries are among the main contributors that can increase the impact of climate change. Photocatalysis using nanosized titanium dioxide (TiO₂) has been continuously developed as a promising technology for purifying dye wastewater into simpler and environmentally friendly components. In addition, the decoration of iron cations (Fe²⁺) and (Fe³⁺) increases the reusability of the photocatalyst due to their magnetic properties, which are easy to collect for the recycling process. Magnetic Fe^x+/TiO₂ microfibers have been successfully prepared using a hydrothermal method using …

A Two-Part Validation Study Of The Sexual Minority Identity Emotion Scale, Henrietta Kadi Tettey-Tawiah

Graduate Theses and Dissertations

A number of existing studies indicate that there is some correlation between pride and shame and various behavioral health outcomes like anxiety, depression, and self-harm in the general population. Research also confirms that this relationship is true among sexual minorities as well. This study sets itself up to interrogate this assertion vis-à-vis sexual minority adolescents (SMAs). Consequently, confirmatory factor analysis (CFA) and differential item functioning (DIF) detection analysis were performed on the 35-item Sexual Minority Identity Emotion Scale (SMIES) for SMAs. A tree-based modeling technique, specifically conditional inference trees (CIT), was then employed to explore and make predictions about the …

Hierarchical Spatial Abundance Models For Migratory Shorebirds, Md Shahbaz Alam

Graduate Theses and Dissertations

Predicting the distribution and abundance of migratory shorebirds is crucial for effective conservation planning. This research applies hierarchical spatial models to predict counts and spatial variations of three shorebird species: Semipalmated sandpiper (sesa), Ruddy turnstone (rutu), and Whimbrel (whim). Different versions of the Poisson, Negative Binomial, and Hurdle regression models are employed to tackle specific data characteristics, such as overdispersion and excess zeros. Model comparisons are performed in terms of likelihood measures and cross-validation. The Hurdle model for sesa and rutu and the Negative Binomial model for whim effectively captured spatial patterns, highlighting potential hotspots. Mean predictive count further emphasized …

Cover-Crop Effects On Near-Surface Soil Properties Over Time In The Lower Mississippi River Valley, Cooper Fanning

Graduate Theses and Dissertations

Human population growth and climate change are present stressors that continue to put pressure on current agricultural production systems, where typical row-crop agricultural practices can negatively impact soil health. Extensive use of cover crops (CC) to increase soil health remains widely unrealized. Soil health in Arkansas is a major concern for sustaining agricultural output, therefore research into CC implementation across Arkansas to maintain or improve soil health is needed. The objective of this study was to evaluate the effects of CC (i.e., with and without CC) across various physical, hydraulic, biological, and chemical soil indicators in the Lower Mississippi River …

Developing Catalysts For The Hydrolysis Of Glycosidic Bonds In Oligosaccharides Using A Spectrophotometric Screening Assay, Susanna Striegler

Chemistry & Biochemistry Faculty Publications and Presentations

In a proof-of-concept study, a method for the empirical design of polyacrylate gel catalysts with the ability to cleave 1→4 α-glycosidic bonds in di- and trisaccharides was elaborated. The study included the synthesis of a 300-gel member library based on two different cross-linkers and 10 acrylate monomers, identification of monomodal gels by dynamic light scattering, and a 96-well plate spectrophotometric screening assay to monitor the hydrolysis of chromophore-free maltose into glucose units. The composition of the matrix of the most efficient catalysts in the library was found to enable CH−π, hydrophobic, and H-bond accepting interactions during the hydrolysis as typically …

Investigating The Applications Of Peps To The Measurement Of The Stabilities Of Staphylococcal Nuclease (Stw) And Human Acidic Fibroblast Growth Factor (Hfgf1), Motolani Omolade Matthew

Graduate Theses and Dissertations

This dissertation presents a detailed investigation into the applications of Protein Equilibrium Population Snapshot H/D Exchange Electrospray Ionization Mass Spectrometry (PEPS-H/D exchange or PEPS) method. This method is based on protein equilibrium unfolding, and its fundamental capability is to capture a "snapshot" of the protein's state, allowing us to monitor the ratio of the unfolded to folded populations at different chemical denaturant concentrations. First, to increase the accuracy of PEPS data analysis for assessing protein stability, the traditional linear extrapolation method (LEM) was replaced. Instead of using LEM, which calculates free energy change based on the peak ratio of unfolded …

Struvite Effects On Greenhouse Gas Emissions From Flood- And Furrow-Irrigated Rice In The Greenhouse, Chandler Arel

Graduate Theses and Dissertations

Over time, as the influences of climate-change and declining, mineable, global phosphorus (P) reserves begin to impact agricultural production systems, alternative fertilizer sources and management practices, such as struvite (MgNH₄PO₄ · 6H₂O) and furrow-irrigation, will be necessary to accommodate nutrient and water demands. The precipitation and use of struvite as a fertilizer-P source could reduce environmental damages caused by nutrient-rich wastewater streams, supplement domestic P supply, and improve the sustainability of flood-, and furrow-irrigated rice production by reducing greenhouse gas emissions. The study of struvite from both chemical and electrochemical precipitation processes is well documented, …

Tuning Electronic Transport And Magnetic Properties Of Layered Magnetic Materials, Md Rafique Un Nabi

Graduate Theses and Dissertations

Two-dimensional magnetic materials (2DMMs) have gained significant interest due to their potential for novel physical phenomena and device applications. Mn_2-xZn_xSb, with its tunable magnetic properties and stable tetragonal layered structure, offers a rich platform for exploring these phenomena. The introduction of Zn into the Mn₂Sb lattice efficiently tunes magnetic and electronic properties, making it a compelling candidate for high-performance spintronic devices.

With this motivation, we synthesized Mn_2-xZn_xSb (0 ≤ x ≤ 1) single crystals using a flux method. Mn2Sb exhibits ferrimagnetic order below 550 K with antiparallel spins aligned along …

Quantum Modeling & Experimental Studies Of Radical Chemistry, Justin Michael Barrett

Graduate Theses and Dissertations

This work describes two projects centered around radical chemical mechanisms. The first investigation generalized the utility of a C-N bond homolysis followed by a [1,3] – rearrangement synthetic strategy found possible in N-alkylated thiazole & benzothiazole species onto analogous systems. Computational investigation guided the inquiry on structurally analogous systems that would favor a radical, [1,3] – rearrangement. Herein, we describe the implementation of that mechanism to transform Breslow Intermediate-like substrates into tertiary alcohol and amide products under facile conditions. We confer on the proficiency of this strategy with 2-pyridinemethanol and the problematic implementation with 2-(aminomethyl)pyridine. The second investigation solved a …

Controls On The Development Of Hummocky Topography On Debris-Covered Glaciers, Ryan M. Strickland

Graduate Theses and Dissertations

Rock debris covers many glaciers in Earth’s highest mountains and the debris impacts glacier response to changes in climate. Interactions between debris, drainage, glacier dynamics, and climate produce contrasts in melt rates that cause debris-covered glaciers to develop complex, hummocky topography. Contrasts in melt rate produce thousands of hills–hummocks–and depressions. Ponds and ice cliffs often form in the depressions. Although ponds and ice cliffs occupy only a small fraction of the surface, they account for nearly half of glacier melt. Understanding the processes that control the development of hummocky topography is key to predicting the evolution of debris-covered glaciers. In …

A Nustar Census Of The X-Ray Binary Population Of The M31 Disk, Hannah Moon, Daniel Wik, V. Antoniou, M. Eracleous, Ann Hornschemeier, Margaret Lazzarini, Bret D. Lehmer, Neven Vulic, Benjamin F. Williams, T. J. Maccarone, K. Pottschmidt, Andrew Ptak, Mihoko Yukita, Andreas Zezas

Physics Faculty Publications and Presentations

Using hard (E > 10 keV) X-ray observations with NuSTAR, we are able to differentiate between the accretion states, and thus compact object types, of neutron stars (NSs) and black holes (BHs) in X-ray binaries (XRBs) in M31, our nearest Milky Way–type neighbor. Using 10 moderate-depth (20–50 ks) observations of the disk of M31 covering a total of ∼0.45 deg², we detect 20 sources at 2σ in the 4–25 keV bandpass, 14 of which we consider to be XRB candidates. This complements an existing, deeper (100–400 ks) survey covering ∼0.2 deg² of the bulge and the …

Settingsorder Article Reprints Open Accessarticle A Model To Account For The Effects Of Load Ratio And Hydrogen Pressure On The Fatigue Crack Growth Behavior Of Pressure Vessel Steels, Ashok Saxena, Kip O. Findley

Mechanical Engineering Faculty Publications and Presentations

A phenomenological model for estimating the effects of load ratio R and hydrogen pressure P_H2 on the hydrogen-assisted fatigue crack growth rate (HA-FCGR) behavior in the transient and steady-state regimes of pressure vessel steels is described. The "transient regime" is identified with crack growth within a severely embrittled zone of intense plasticity at the crack tip. The "steady-state" behavior is associated with the crack growing into a region of comparatively lower hydrogen concentration located further away from the crack tip. The model treats the effects of R and P_H2 as being functionally separable. In the transient …

Revealing Structural Evolution Of Nickel Phosphide-Iron Oxide Core–Shell Nanocatalysts In Alkaline Medium For The Oxygen Evolution Reaction, Ryan H. Manso, Jiyun Hong, Wei Wang, Prashant Acharya, Adam S. Hoffman, Xiao Tong, Feng Wang, Lauren F. Greenlee, Yimei Zhu, Simon R. Bare, Jingyi Chen

Chemistry & Biochemistry Faculty Publications and Presentations

Metal phosphide-containing materials have emerged as a potential candidate of nonprecious metal-based catalysts for alkaline oxygen evolution reaction (OER). While it is known that metal phosphide undergoes structural evolution, considerable debate persists regarding the effects of dynamics on the surface activation and morphological stability of the catalysts. In this study, we synthesize NiP_x-FeO_x core–shell nanocatalysts with an amorphous NiP_x core designed for enhanced OER activity. Using ex situ X-ray absorption spectroscopy, we elucidate the local structural changes as a function of the cyclic voltammetry cycles. Our studies suggest that the presence of corner-sharing octahedra in the …

Shoreline Barriers May Amplify Coastal Groundwater Hazards With Sea-Level Rise, Xin Su, K. M. Befus, Michelle A. Hummel

Geosciences Faculty Publications and Presentations

Subsurface barriers have been proposed to protect coastal aquifers from sea-level rise induced seawater intrusion, but the potential for groundwater emergence near subsurface barriers remains unknown. Here, we investigated how emergence changes groundwater flow conditions and influences the protective performance of subsurface barriers with sea-level rise. We tested the subterranean consequences of sea-level rise for cutoff walls and subsurface dams with cross-shore groundwater flow and salt transport models, investigating how barrier design, aquifer properties, and hydrological conditions control the potential for emergence, groundwater partitioning at the barrier, and seawater intrusion with sea-level rise. We find that most subsurface infrastructure cannot …

Evaluating Artificial Intelligence On The Efficacy Of Preference Assessments For Preservice Speech-Language Pathologists, Brenna Griffin, Elizabeth R. Lorah, Christine Holyfield, Nicolette Caldwell, John Nosek

Curriculum and Instruction Faculty Publications and Presentations

Individuals with intellectual and developmental disabilities (IDD) face many barriers to meaningful inclusion, including limited language and communication skills. Professionals, such as speech-language pathologists (SLPs), can provide personalized instruction to promote skill development and inclusion. Providing opportunities for individuals to express preferences and choice, such as the multiple stimulus without replacement preference assessment (MSWO; DeLeon & Iwata 1996), within these programs, further increases skill acquisition and social interaction. However, limitations in professionals’ knowledge and skills in performing assessments can be another barrier to meaningful inclusion for individuals with IDD and traditional training methods can be challenging and time consuming. …

Learning From Oversampling: A Systematic Exploitation Of Oversampling To Address Data Scarcity Issues In Deep Learning- Based Magnetic Resonance Image Reconstruction, Ibsa Kumara Jalata, Reeshad Khan, Ukash Nakarmi

Computer Science and Computer Engineering Faculty Publications and Presentations

Data acquisitions in Magnetic Resonance Imaging (MRI) are inherently slow due to sequential acquisition protocol. Image reconstruction from under-sampled data is posed as an inverse problem in traditional model-based learning paradigms. Recent data-centric learning frameworks such as deep learning (DL) frameworks are data hungry, and demand a large, labeled training data sets. To address the lack of large training datasets, in MRI reconstructions, researchers approach the problem in two ways: (1) unsupervised method where the model is trained without the presence of fully sampled data. (2) using a method that efficiently use the limited dataset for training purpose. In this …

The Impacts Of Dimensionality, Diffusion, And Directedness On Intrinsic Cross-Model Simulation In Tile-Based Self-Assembly, Daniel Hader, Matthew J. Patitz

Computer Science and Computer Engineering Faculty Publications and Presentations

Motivated by applications in DNA-nanotechnology, theoretical investigations in algorithmic tile-assembly have blossomed into a mature theory. In addition to computational universality, the abstract Tile Assembly Model (aTAM) was shown to be intrinsically universal (FOCS 2012), a strong notion of completeness where a single tile set is capable of simulating the full dynamics of all systems within the model; however, this construction fundamentally required non-deterministic tile attachments. This was confirmed necessary when it was shown that the class of directed aTAM systems, those where all possible sequences of tile attachments result in the same terminal assembly, is not intrinsically universal (FOCS …

React: Recognize Every Action Everywhere All At Once, Naga Venkata Sai Raviteja Chappa, Pha Nguyen, Page Daniel Dobbs, Khoa Luu

Electrical Engineering and Computer Science Faculty Publications and Presentations

In the realm of computer vision, Group Activity Recognition (GAR) plays a vital role, finding applications in sports video analysis, surveillance, and social scene understanding. This paper introduces Recognize Every Action Everywhere All At Once (REACT), a novel architecture designed to model complex contextual relationships within videos. REACT leverages advanced transformer-based models for encoding intricate contextual relationships, enhancing understanding of group dynamics. Integrated Vision-Language Encoding facilitates efficient capture of spatiotemporal interactions and multi-modal information, enabling comprehensive scene understanding. The model’s precise action localization refines joint understanding of text and video data, enabling precise bounding box retrieval and …

Arkansas Corn And Grain Sorghum Research Studies 2023, Jason Kelley, Travis Faske

Arkansas Agricultural Experiment Station Research Series

The 2023 edition of the Arkansas Corn and Grain Sorghum Research Studies Series includes research results on topics pertaining to corn and grain sorghum production, including weed, disease, and insect management; economics; irrigation; agronomics; soil fertility; mycotoxins; cover crop management; and research verification program results. Our objective is to capture and broadly distribute the results of research projects funded by the Arkansas Corn and Grain Sorghum Board. The intended audience includes producers and their advisors, current investigators, and future researchers. The Series serves as a citable archive of research results.

Understanding And Tuning Magnetism In Layered Ising-Type Antiferromagnet Fepse3 For Potential 2d Magnet, Rabindra Basnet, Taksh Patel, Jian Wang, Dinesh Upreti, Santosh Karki Chhetri, Gokul Acharya, Md Rafique Un Nabi, Joshua Sakon, Jin Hu

Chemistry & Biochemistry Faculty Publications and Presentations

Recent developments in 2D magnetic materials have motivated the search for new van der Waals magnetic materials, especially Ising-type magnets with strong magnetic anisotropy. Fe-based MPX₃ (M = transition metal, X = chalcogen) compounds such as FePS₃ and FePSe₃ both exhibit an Ising-type magnetic order, but FePSe₃ receives much less attention compared to FePS₃. This work focuses on establishing the strategy to engineer magnetic anisotropy and exchange interactions in this less-explored compound. Through chalcogen and metal substitutions, the magnetic anisotropy is found to be immune against S substitution for Se whereas …

Exploring The Effects Of An Alfalfa Leaf-Derived Adsorbent On Microbial Community, Ileal Morphology, Barrier Function, And Immunity In Turkey Poults During Chronic Aflatoxin B1 Exposure, Maria De Jesus Nava-Ramirez, Jing Liu, Juan Omar Hernandez-Ramirez, Xochitl Hernandez-Velasco, Juan D. Latorre, Alma Vazquez-Duran, Guolong Zhang, Roberto Señas-Cuesta, Sergio Gomez-Rosales, Andressa Stein, Billy M. Hargis, Guillermo Tellez-Isaias, Abraham Mendez-Albores, Jesus A. Maguey-Gonzalez

Poultry Science Faculty Publications and Presentations

This article follows-up on our recently published work, which evaluated the impact of the addition of an alfalfa leaf-derived adsorbent in the aflatoxin B₁ (AFB₁)-contaminated diet in regard to the production parameters, blood cell count, serum biochemistry, liver enzymes, and liver histology of turkey poults. This paper presents complementary results on microbial community, ileal morphology, barrier function, and immunity. For this purpose, 350 1-day-old female turkey poults were randomly distributed into five groups: (1) Control, AFB₁-free diet; (2) AF, AFB₁-contaminated diet at 250 ng/g; (3) alfalfa, AFB₁-free diet + 0.5% ( …

Tectono-Sedimentary History Of The Upper Cedar Mountain Formation, Central Utah, Usa, Ryan T. Tucker, M. Ryan King, Michael T. Mohr, Ray K. Renault, James L. Crowley, Jack W. Fekete, Peter J. Makovicky, Lindsay E. Zanno

Geosciences Faculty Publications and Presentations

Current investigations into the Albian–Cenomanian sedimentary record within the Western Interior have identified multiple complex tectono-sedimentary process–response systems during the ongoing evolution of North America. One key sedimentary succession, the upper Cedar Mountain Formation (Short Canyon Member and Mussentuchit Member), has historically been linked to various regionally and continentally significant tectonic events, including Sevier fold-and-thrust deformation. However, the linkage between the Short Canyon Member and active Sevier tectonism has been unclear due to a lack of high-precision age constraints. To establish temporal context, this study compares maximum depositional ages from detrital zircons recovered from the Short Canyon Member with that …

On Laudenbach-Type Exact Sequences, Jorge Andres Robinson Arrieta

Graduate Theses and Dissertations

Laudenbach proved that the mapping class group of the connected sum of $n$ copies of $S^2 \times S^1$ is an extension of $\text{Out}(F_n)$ by a finite group. Brendle, Broaddus and Putman proved that this exact sequence splits. We provide an explicit section $s$ of this split exact sequence. Given a locally finite graph $\Gamma$, Udall proved that the mapping class group of the doubled handlebody associated to $\Gamma$ is an extension of $\map(\Gamma)$ by a possibly infinite direct product of $\Z_2$, and proved that this exact sequence splits. We provide an explicit formula for this section $s$ of $\Psi$ restricted …

Carbon-Based Nanocomposite Membranes For Membrane Distillation: Progress, Problems And Future Prospects, Chhabilal Regmi, Yuwaraj K. Kshetri, S. Ranil Wickramasinghe

Chemical Engineering Faculty Publications and Presentations

The development of an ideal membrane for membrane distillation (MD) is of the utmost importance. Enhancing the efficiency of MD by adding nanoparticles to or onto a membrane’s surface has drawn considerable attention from the scientific community. It is crucial to thoroughly examine state-of-the-art nanomaterials-enabled MD membranes with desirable properties, as they greatly enhance the efficiency and reliability of the MD process. This, in turn, opens up opportunities for achieving a sustainable water–energy–environment nexus. By introducing carbon-based nanomaterials into the membrane’s structure, the membrane gains excellent separation abilities, resistance to various feed waters, and a longer lifespan. Additionally, the use …