Physical Sciences and Mathematics Commons^™

Client Access Feature Engineering For The Homeless Community Of The City Of Portland, Oswaldo Ceballos Jr

altREU Projects

Given the severity of homeless in many cities across the country, the project at hand attempts to assist a service provider organization called Central City Concern (CCC) with their mission of providing services to the community of Portland. These services include housing, recovery, health care, and jobs. With many different types of services available through the works of CCC, there exists an abundance of information and data pertaining to the individuals that interact with the CCC service system. The goal of this project is to perform an exploratory analysis and feature engineer the existing datasets CCC has collected over the …

E-Cigarette Fluids And Aerosol Residues Cause Oxidative Stress And An Inflammatory Response In Human Keratinocytes And 3d Skin Models., Careen Khachatoorian, Wentai Luo, Kevin J. Mcwhirter, James F. Pankow, Prue Talbot

Chemistry Faculty Publications and Presentations

Our goal was to evaluate the effects of EC refill fluids and EC exhaled aerosol residue (ECEAR) on cultured human keratinocytes and MatTek EpiDerm™, a 3D air liquid interface human skin model. Quantification of flavor chemicals and nicotine in Dewberry Cream and Churrios refill fluids was done using GC-MS. The dominant flavor chemicals were maltol, ethyl maltol, vanillin, ethyl vanillin, benzyl alcohol, and furaneol. Cytotoxicity was determined with the MTT and LDH assays, and inflammatory markers were quantified with ELISAs. Churrios was cytotoxic to keratinocytes in the MTT assay, and both fluids induced ROS production in the medium (ROS-Glo™) and …

Mechanistic Investigation Of Neuropeptide S-Nitrosylation By Nitric Oxide Moieties: A Kinetic And Thermodynamic Approach, Vusumuzi Leroy Sibanda

Dissertations and Theses

This dissertation focuses on providing quantitative insights regarding kinetic, thermodynamic and mechanistic parameters of neuropeptide S-nitrosylation by nitrous acid (HNO₂), peroxynitrite (ONOO^-) and S-nitroso-N-acetyl-D,L-penicillamine (SNAP) to produce S-nitrosothiols (SNOs). Peptide thiol stability and the formation of SNOs from neuropeptides; arginine vasopressin (AVP), somatostatin-14 (SST-14) and urotensin II (U-II) was studied. Investigations into the effects of temperature, copper chelators and pH on peptide thiol autoxidation show that AVP, SST-14 and U-II thiols have half-lives of 30, 44 and 28.2 mins respectively at physiologically relevant temperature and pH in the absence of metal chelators. Target peptide thiols were …

Automated Statistical Structural Testing Techniques And Applications, Yang Shi

Dissertations and Theses

Statistical structural testing(SST) is an effective testing technique that produces random test inputs from probability distributions. SST shows superiority in fault-revealing power over random testing and deterministic approaches since it heritages the merits from both of them. SST ensures testing thoroughness by setting up a probability lower-bound criterion for each structural cover element and test inputs that exercise a structural cover element sampled from the probability distribution, ensuring testing randomness. Despite the advantages, SST is not a widely used approach in practice. There are two major limitations. First, to construct probability distributions, a tester must understand the underlying software's structure, …

A Paleoseismic Study Of The Twin Lakes Fault, Mount Hood Fault Zone, Oregon, Charlie Carr, Ashley R. Streig

McNair Symposium

Recent geologic mapping on high-resolution topography from lidar has led to the discovery of a zone of active faults on Mount Hood. The Mt. Hood Fault Zone consists of four separate faults, and stretches ~55 km from south to north, and crosses the summit of Mount Hood. The focus of this study is the northern section of Twin Lakes Fault, which lies directly south of Mount Hood and adjacent to OR35 and the White River. Lidar topography reveals the west side down normal displacement on the Twin Lakes fault. The highest tectonic seismicity rates in the Mount Hood area occur …

Ronald E. Mcnair Scholars Program Profiles And Abstracts 2021, Mcnair Scholars Program

McNair Symposium

This is the complete event program and provides presentation abstracts and biographies of McNair scholars and their mentors.

Quantum Grover's Oracles With Symmetry Boolean Functions, Peng Gao

Dissertations and Theses

Quantum computing has become an important research field of computer science and engineering. Among many quantum algorithms, Grover's algorithm is one of the most famous ones. Designing an effective quantum oracle poses a challenging conundrum in circuit and system-level design for practical application realization of Grover's algorithm.

In this dissertation, we present a new method to build quantum oracles for Grover's algorithm to solve graph theory problems. We explore generalized Boolean symmetric functions with lattice diagrams to develop a low quantum cost and area efficient quantum oracle. We study two graph theory problems: cycle detection of undirected graphs and generalized …

Proximal Policy Optimization For Radiation Source Search, Philippe Erol Proctor

Dissertations and Theses

Rapid localization and search for lost nuclear sources in a given area of interest is an important task for the safety of society and the reduction of human harm. Detection, localization and identification are based upon the measured gamma radiation spectrum from a radiation detector. The nonlinear relationship of electromagnetic wave propagation paired with the probabilistic nature of gamma ray emission and background radiation from the environment leads to ambiguity in the estimation of a source's location. In the case of a single mobile detector, there are numerous challenges to overcome such as weak source activity, multiple sources, or the …

Information Security Maturity Model For Healthcare Organizations In The United States, Bridget Joan Barnes Page

Dissertations and Theses

This research provides a maturity model for information security for healthcare organizations in the United States. Healthcare organizations are faced with increasing threats to the security of their information systems. The maturity model identifies specific performance metrics, with relative importance measures, that can be used to enhance information security at healthcare organizations allowing them to focus scarce resources on mitigating the most important information security threat vectors. This generalizable, hierarchical decision model uses both qualitative and quantitative metrics based on objective goals. This model may be used as a baseline by which to measure individual organizational performance, to measure performance …

Insight Into The Early Exhumation Of The Cycladic Blueschist Unit, Syros, Greece: Combined Application Of Zoned Garnet Geochronology, Thermodynamic Modeling, And Quartz Elastic Barometry, Jennifer S. Gorce, Mark J. Caddick, Ethan F. Baxter, Besim Dragovic, John C. Schumacher, Robert J. Bodnar, Jamie F. Kendall

Geology Faculty Publications and Presentations

Constraining conditions and mechanisms of the early stages of exhumation from within subduction zones is challenging. Although pressure, temperature, and age can be inferred from the exhumed rock record, it is generally difficult to derive each of these parameters from any single rock, thus demanding assumptions that diverse data from multiple samples can be safely combined into a single pressure-temperature-time (P-T-t) path that might then be used to infer tectonic context and mechanisms of exhumation. Here, we present new thermobarometric and geochronologic information preserved in a single sample from Syros, Greece, to deduce the …

Participatory Gis Mapping Highlights Indirect Use And Existence Values Of Coastal Resources And Marine Conservation Areas, Kaegan M. Scully‐Engelmeyer, Elise F. Granek, Max Nielsen-Pincus, Greg Brown

Environmental Science and Management Faculty Publications and Presentations

Consideration of social and cultural dimensions in coastal and marine planning has increased and ecosystem services provide important framing to investigate values and priorities associated with these systems. Research efforts in coastal communities offer insights on social dimensions of ocean and coastal management decisions, but questions remain about how demographics and geographic residence affect perceptions of marine resources and management. We conducted and analyzed a public participation geographic information system (PPGIS) mapping survey of Oregon residents to capture uses and perceived values of coastal and marine areas. We measured coastal values, explored regional differences in those values, and identified a …

Marine Debris And Human Health: An Exposure Pathway Of Pops?, Katie Conlon

Urban Studies and Planning Faculty Publications and Presentations

Although there are not any direct studies linking persistent organic pollutants (POPs) accumulated on marine debris to human health, there are numerous studies showing human health impacts from repeated and high level POP exposure, as well as studies that show POPs accumulate on plastic debris in the marine environment. With this knowledge, there is a need for greater awareness of the risks of POP exposure for those who handle marine debris regularly, especially in contexts of higher exposure such as those working in marine debris concentrated areas. Amongst the scientific community, understanding of the exposure risk might be high, but …

Microscopic Object Classification Through Passive Motion Observations With Holographic Microscopy, Christian Lindensmith, Jay Nadeau, Manuel Bedrossian, Louis Sumrall, J. Kent Wallace, Eugene Serabyn

Physics Faculty Publications and Presentations

Digital holographic microscopy provides the ability to observe throughout a volume that is large compared to its resolution element without the need to refocus through the volume. This capability enables simultaneous observations of large numbers of small objects within such a volume. We have constructed a microscope that can observe a volume 0.4 x 0.4 x 1.0 μm with submicrometer resolution for observation of microorganisms and minerals in liquid environments in earth and on potential planetary missions. Because environmental samples are likely to contain mixtures of inorganics and microorganisms that are of comparable sizes near the resolution limit of the …

Linear Nearest Neighbor Flocks With All Distinct Agents, R. G. Lyons, J. J. P. Veerman

Mathematics and Statistics Faculty Publications and Presentations

This paper analyzes the global dynamics of one-dimensional agent arrays with nearest neighbor linear couplings. The equations of motion are second-order linear ODE’s with constant coefficients. The novel part of this research is that the couplings are different for each distinct agent. We allow the forces to depend on the positions and velocity (damping terms) but the magnitudes of both the position and velocity couplings are different for each agent. We, also, do not assume that the forces are “Newtonian” (i.e. the force due to A on B equals the minus the force of B on A) as this assumption …

Graphical Models In Reconstructability Analysis And Bayesian Networks, Marcus Harris, Martin Zwick

Complex Systems Faculty Publications and Presentations

Reconstructability Analysis (RA) and Bayesian Networks (BN) are both probabilistic graphical modeling methodologies used in machine learning and artificial intelligence. There are RA models that are statistically equivalent to BN models and there are also models unique to RA and models unique to BN. The primary goal of this paper is to unify these two methodologies via a lattice of structures that offers an expanded set of models to represent complex systems more accurately or more simply. The conceptualization of this lattice also offers a framework for additional innovations beyond what is presented here. Specifically, this paper integrates RA and …

Exploring Linkages Between Landscape Patterns And Freshwater And Estuarine Bivalves In The Coast Range Of Oregon, Kaegan Michael Scully-Engelmeyer

Dissertations and Theses

Spatial configurations of landscape variables (biotic, abiotic, and socio-ecological) affect and are affected by ecological processes and species in watersheds. This dissertation explores relationships among landscape patterns, ecosystem processes and bivalve species dynamics in coastal watersheds in Oregon, USA. I approached this broad topic through two primary avenues of research: investigating cross-ecosystem threats from pesticide use in forestland management to downstream aquatic environments, and the landscape ecology of an at-risk freshwater mussel species.

Terrestrial land use activities present cross-ecosystem threats to riverine and marine species and processes. Specifically, pesticide runoff can disrupt hormonal, reproductive, and developmental processes in aquatic organisms, …

Data From: Drivers Of Zooplankton Community Composition In A Novel Ecosystem: Hawai’I Mangroves As A Case Study, Casey L. Lewis, Elise F. Granek

Environmental Science and Management Datasets

Management of established non-native plants is challenging because removal is expensive and can produce negative consequences, yet establishment can create novel ecosystems. Red mangrove propagules were introduced to Moloka'i, Hawai’i in 1902 to mitigate the effects of soil erosion and have since spread along the coast and to adjacent islands creating novel habitat. We compared zooplankton communities between novel mangrove and historical non-mangrove habitat both within fishponds and along open coastline to examine environmental factors, including mangrove presence, affecting zooplankton community composition.

Community composition patterns were driven by lunar cycle and site characteristics, including fishpond structure, mangrove and open coast …

Regional Characteristics And Variability Of Extreme Precipitation And Atmospheric Rivers In Past, Present, And Future Climates Over The Contiguous United States, Emily Anne Slinskey

Dissertations and Theses

This dissertation examines the regional and seasonal variability of extreme precipitation and atmospheric rivers (ARs) across the contiguous United States (CONUS) in past, present, and future climates. An extreme precipitation categorization scheme, designed to monitor and track the multi-scale variability of extreme precipitation, is applied to a range of precipitation measurement products as an assessment of observational uncertainty. To investigate the importance of ARs across the CONUS, an objective AR identification algorithm is applied to global reanalysis to identify and characterize AR characteristics regionally over the observational record. Projected change in AR day frequency, geometry, intensity, and associated precipitation is …

Climate Model Evaluation Of Atmospheric Rivers Over The Contiguous United States, Ilan González-Hirshfeld

Dissertations and Theses

Atmospheric rivers (ARs)--long corridors of intense atmospheric water vapor transport--significantly influence the hydrologic cycle and regional hydrometeorological extremes across the contiguous United States (CONUS). Ongoing and future climate change may alter AR characteristics and impacts, making confident climate model projections of future change, especially at regional scales, of critical importance. In order to better constrain uncertainty in such projections of future change, we perform a comprehensive climate model evaluation of AR climatology over the CONUS. Using an established AR detection algorithm, we evaluate the representation of ARs in historical simulations (1984-2013) from a suite of models participating in the sixth …

The Development And Application Of Instrumental Methods For The Identification Of Materials And Processes Used In The Manufacture Of Orotone, Hand-Colored Orotone, And Silvertone Photographs, Ivanny Jeannette Jácome-Valladares

Dissertations and Theses

Orotone photographs are positive photographic images on glass with a gold-colored metallic coating or backing. Although the materials and process used in the production of orotones have been previously documented, there is limited published scientific research on the subject. This study focused on expanding those published works by analyzing a greater number of photographs, including eleven orotones, four hand-colored orotones, two silvertones, and one uncoated orotone. The photographs, dating from the early to mid-20^th century, were from the University of Washington (UW) Libraries' collection, except for one orotone that was from the Portland Art Museum.

X-ray Fluorescence (XRF) spectroscopy, …

An Analysis Of Capillary Flow In Finite Length Interior Corners, Samuel Shaw Mohler

Dissertations and Theses

We analyze the mathematical robustness of slow massively parallel interior corner flows in low gravity environments. An interior corner provides a preferential orientation in low gravity environments. This is a luxury usually only found on earth. It also provides a passive pumping mechanism due to geometry of a conduit. The driving force for this flow is a pressure difference due to local surface curvature gradients. An alternative reasoning is that due to the geometrical constraints the interior corner surface energy is unbounded below. This results in the liquid wicking into corners indefinitely. Interior corner flow's main quantity of interest is …

A Ground-Based Assessment Framework For Validating Diesel Particulate Emission Models And Applicability In Portland, Or, Kirsten Marie Sarle

Dissertations and Theses

Exposure to diesel emissions causes a range of health effects throughout the body, impairing; respiratory, cardiovascular, central nervous, renal, and cognitive systems. Diesel particulate matter (DPM) in Portland, Oregon is prevalent due to the layout of highly trafficked roadways, rail lines, and marine ports exposing a dense population to high levels of exhaust pollution. These high concentrations of ambient diesel emissions disproportionately impact minority and low-income populations.

Ground-based monitoring and modeling are two ways to assess ambient DPM. However, there are uncertainties in modeled DPM due to knowledge gaps in emissions inventories as well as lack of model validation against …

Projections Of Large-Scale Atmospheric Circulation Patterns And Associated Temperature And Precipitation Over The Pacific Northwest Using Cmip6 Models, Graham Patrick Taylor

Dissertations and Theses

Projections of 500 hPa geopotential height (Z500) patterns over the Pacific Northwest of North America and their associated surface temperature, precipitation, and frequency of occurrence are assessed using models from the 6th phase of the Coupled Model Intercomparison Project (CMIP6). The self-organizing maps approach is applied to reanalysis data from the Modern-Era Retrospective Analysis for Research and Applications, version-2 (MERRA-2) to cluster daily Z500 anomalies into 12 representative patterns that span the range of historical circulation patterns. CMIP6 data for daily Z500 anomalies are mapped to each node for historical and end of century global warming experiments, and the resulting …

Field Trials And Long-Term Monitoring Of Microbially-Induced Desaturation For The Treatment Of Liquefiable Silty Soils, Kayla Rae Sorenson

Dissertations and Theses

Earthquake liquefaction hazards in silty soils are a critical problem in Portland, Oregon, and other areas around the world. This is a particular problem for existing facilities founded on liquefiable soils, for which there exists no cost-effective liquefaction mitigation solution at the present time. It is essential from both a seismic safety and a seismic resilience perspective to be able to mitigate potentially liquefiable soils underneath existing structures, and to do so in a cost-effective manner. Recent studies suggest that liquefaction mitigation using microbially-induced desaturation (MID) may provide this capability.

The objective of MID is to reduce earthquake-induced excess pore …

New Perspectives On Prolific And Voluminous Rhyolite Volcanism Of The Mahogany Mountain--Three Fingers Rhyolite Field, Eastern Oregon, Robert Andrew Jackson

Dissertations and Theses

Voluminous silicic volcanism of the Mahogany Mountain--Three Fingers rhyolite field (MM--TFrf) is spatially and temporally associated with mid-Miocene flood basalts of the Columbia River Basalt province. Early studies of the area advocated for a two-caldera model consisting of the Mahogany Mountain and the slightly younger Three Fingers caldera with pre- and post-caldera effusive rhyolite eruptions. Although close in time, the calderas were thought to be spatially offset producing the tuff of Leslie Gulch and the tuff of Spring Creek. Finding that the tuff of Spring Creek, that is exposed in Leslie Gulch, is an altered product of the tuff of …

Modeling Cyanotoxin Production, Fate And Transport In Surface Waterbodies, Bernadel Rose Hintz Garstecki

Dissertations and Theses

Cyanobacteria exist throughout the world and are frequently associated with forming toxic blooms. The toxins produced by cyanobacteria, cyanotoxins, are harmful to both humans and animals. Rising temperatures due to global climate change, increased nutrient loading, and other anthropogenic impacts on waterbodies are expected to increase the prevalence of cyanobacteria. It is vital that we protect our drinking water supplies and natural water resources. Modeling the production and movement of these toxins is an important step in limiting exposure to them and evaluating management strategies to mitigate their impact. Cyanotoxins are diverse and the conditions under which they are formed …

Using Quantitative Stereology On High Resolution Sem Images To Estimate Diatom Percentages, Ariadna Covarrubias Ornelas

Dissertations and Theses

Diatoms are single-celled organisms of various shapes and sizes typically found in aquatic environments. When diatoms die, the organic material decomposes, and the outer skeletons (i.e., frustules) settle and accumulate as sedimentary deposits. These soils, called diatomaceous soils, exhibit nontraditional behavior since the diatom particles are typically hollow skeletons composed of amorphous silica with intricately patterned and abrasive surfaces. Recent studies have shown that diatomaceous soils are challenging geomaterials since even a small percentage of diatom particles will notably affect engineering behavior. Furthermore, laboratory studies on diatomaceous soil mixtures have demonstrated that many engineering soil properties depend on the percentage …

Enrolling Reactive Oxygen Species In Photon-To-Chemical Energy Conversion: Fundamentals, Technological Advances, And Applications, Irving D. Rettig, Theresa M. Mccormick

Chemistry Faculty Publications and Presentations

In theory, oxygen (O2) is an ideal chemical reagent because of its high relative abundance and negligible environmental toxicity. In practice however, by the nature of its ground state electronic configuration, many chemical reactions involving O2 are spin forbidden which dramatically decreases its reactivity and thus its utility in applications. More reactive forms of O2 can be achieved by changing its electronic configuration through the use of photochemical and photophysical methods. This review highlights the roll of photon-to-chemical energy conversion in two of these reactive oxygen species (ROS): superoxide (O2−) and singlet oxygen (1O2), which can be accessed through a …

Simulation Of Light Propagation Captured By Photoemission Electron Microscopy (Peem), Nabila Islam

Dissertations and Theses

The Photoemission electron microscopes (PEEM) is a powerful tool capable of synchronously imaging wave nature of light manifested by interference patterns as well as its particle nature through the energy exchange between the incident photons and the photoemitted imaging electrons. PEEM offers a non-invasive high-resolution approach for studying light propagation and interaction phenomena within a nanophotonic waveguide [7,8]. The electric field intensity variation of the interference pattern yielded by the interaction between the incident light and the guided mode coupled into the waveguide produces varying photoemission yields creating contrast in PEEM image. The guided modes cannot be excited simply by …

Rowing Concerns: Collaborative Governance And Stakeholder Determination In The Central Oregon's Deschutes Basin, Noel Vineyard

Dissertations and Theses

In 2019, a coalition of irrigation districts in central Oregon's Deschutes Basin submitted the Deschutes Basin Habitat Conservation Plan to the US Department of Fish and Wildlife. This Habitat Conservation Plan purported to have been constructed through a collaborative governance structure between the irrigation districts and various community stakeholders who all had interests in basin management, however segments of the Basin's river recreation community began to raise concerns that their voices were not included. The purpose of this research was to investigate how stakeholder status in the Deschutes Basin is created through collaborative water governance processes like development of the …