Physical Sciences and Mathematics Commons^™

Circulation, Vol. 19, No. 1, Center For Coastal Physical Oceanography, Old Dominion University, John M. Klinck, Eileen E. Hofmann

CCPO Circulation

Spring 2014 issue of Circulation, featuring the article "Theoretical Models of Marine Infectious Diseases and the Effects of Climate Variability" by John Klinck and Eileen Hofmann

Section Abstracts: Astronomy, Mathematics, And Physics With Materials Science

Virginia Journal of Science

Abstracts of the Astronomy, Mathematics, and Physics with Materials Science Section for the 92nd Annual Meeting of the Virginia Academy of Science, May 13-15, 2014, Virginia Commonwealth University, Richmond, Virginia

Section Abstracts: Computer Science

Virginia Journal of Science

Abstracts of the Computer Science Section for the 92nd Annual Meeting of the Virginia Academy of Science, May 13-15, 2014, Virginia Commonwealth University, Richmond, Virginia

Section Abstracts: Statistics

Virginia Journal of Science

Abstracts of the Statistics Section for the 92nd Annual Meeting of the Virginia Academy of Science, May 13-15, 2014, Virginia Commonwealth University, Richmond, Virginia

Learning To Live With Changing Climate And Rising Sea Levels, Mitigation & Adaption Research Institute (Mari), Old Dominion University

MARI Documents

In support of the development of the Mitigation and Adaptation Research Institute, MARI, the proposal writing team developed a survey to elicit stakeholder comment. The survey was conducted using the internet-­‐based survey tool, Qualtrics, hosted by Old Dominion University and was available from February 26 to March 21, 2014

The survey was distributed to approximately 550 stakeholders who were identified through their participation in previous climate change adaptation events, local government contacts and email lists. Recipients were asked to invite interested colleagues or other contacts to participate in the survey by forwarding the solicitation email. One hundred and eleven responses …

Document Classification In Support Of Automated Metadata Extraction Form Heterogeneous Collections, Paul K. Flynn

Computer Science Theses & Dissertations

A number of federal agencies, universities, laboratories, and companies are placing their documents online and making them searchable via metadata fields such as author, title, and publishing organization. To enable this, every document in the collection must be catalogued using the metadata fields. Though time consuming, the task of identifying metadata fields by inspecting the document is easy for a human. The visual cues in the formatting of the document along with accumulated knowledge and intelligence make it easy for a human to identify various metadata fields. Even with the best possible automated procedures, numerous sources of error exist, including …

Comparison Of Two Separation Methods For Biological Particles: Field-Flow Fractionation (Fff) And Sucrose Density Gradients, Cody E. Garrison

OES Theses and Dissertations

Sucrose gradient centrifugation and Field-flow fractionation (FFF) are two different particle separation methods that overcome the problems of similar size microorganisms clumping together during standard filtration methods. FFF separates particles based on size and density via the parabolic velocity profile of laminar flow in a ribbon-like channel. The sucrose method separates particles via centrifugation in a density gradient. Both techniques worked well in separating eukaryotic from prokaryotic microbes, with the preferred method depending on the type and relative abundance of organisms to be separated. Minicells were separated from mother cells in transformed Escherichia coli cultures, heterotrophic flagellates (e.g., Diplonema papillatum …

Phytoplankton In Virginia Lakes And Reservoirs: Part Ii, Harold G. Marshall

Virginia Journal of Science

Phytoplankton composition from 16 Virginia lakes and reservoirs are discussed with emphasis on the dominant taxa, algal bloom producers, and potentially harmful species at these locations. This is a companion study to the more comprehensive publication regarding Virginia freshwater phytoplankton by Marshall (2013).

Transparent Spectrum Co-Access In Cognitive Radio Networks, Jonathan Daniel Backens

Electrical & Computer Engineering Theses & Dissertations

The licensed wireless spectrum is currently under-utilized by as much as 85%. Cognitive radio networks have been proposed to employ dynamic spectrum access to share this under-utilized spectrum between licensed primary user transmissions and unlicensed secondary user transmissions. Current secondary user opportunistic spectrum access methods, however, remain limited in their ability to provide enough incentive to convince primary users to share the licensed spectrum, and they rely on primary user absence to guarantee secondary user performance. These challenges are addressed by developing a Dynamic Spectrum Co-Access Architecture (DSCA) that allows secondary user transmissions to co-access transparently and concurrently with primary …

Assessing Organizational Effectiveness Through The Competing Values Framework A Data Envelopment Approach, Raghavender Macherla

Engineering Management & Systems Engineering Theses & Dissertations

This study proposes a model to diagnose organizations using the mathematical principles of data envelopment analysis (DEA) to the variables generated using competing values framework (CVF) in order to evaluate overall organizational effectiveness. The notion of organizational effectiveness is abstract and difficult to measure due to its complexity and multi-functional nature. Over the years, measurement of organizational effectiveness has remained a challenge due to the lack of agreement on the factors that should be assessed to determine effectiveness. This research is aimed at shedding some light into this topic by using data envelopment analysis as a tool to measure relative …

Growth And Nitrogen Uptake Kinetics In Cultured Procentrum Donghaiense, Zhangxi Hu, Shunshan Duan, Margaret R. Mulholland

OES Faculty Publications

We compared growth kinetics of Prorocentrum donghaiense cultures on different nitrogen (N) compounds including nitrate, ammonium urea, glutamic acid, dialanine, and cynate. P. donghaiense exhibited standard Monod-type growth kinetics over a range of nitrogen concentrations for all N. Compounds tested. Cultures grown on glu and urea had the highest maximum growth rates. However, cultures grown on cyanate had lower half saturation constants. Nitrogen uptake kinetics were measured in nitrate-deplete and replete batch cultures of P. donghaiense. In nitrate-deplete batch cultures, P. donghaiense exhibited Michaelis-Menten type uptake kinetics for nitrate, ammonium, urea and algal amino acids; uptake was saturated at …

Section Abstracts: Chemistry

Virginia Journal of Science

Abstracts of the Chemistry Section for the 92nd Annual Meeting of the Virginia Academy of Science, May 13-15, 2014, Virginia Commonwealth University, Richmond, Virginia

Section Abstracts: Environmental Science

Virginia Journal of Science

Abstracts of the Environmental Science Section for the 92nd Annual Meeting of the Virginia Academy of Science, May 13-15, 2014, Virginia Commonwealth University, Richmond, Virginia

Simulation Modeling And Analysis Of Customs-Regulated Container Terminal Operations With Multimodal Transportation, Mariam A. Kotachi

Engineering Management & Systems Engineering Theses & Dissertations

World trade has been increasing dramatically in the past two decades and, as a result, container exchange has grown significantly. Consequently and to meet this increase, several container terminals are expanding and many new ones are being established. A port with one or more container terminals is considered a complex system in which many entities interact to accomplish seamless handling of containers inbound and outbound. The level of complexity is drastically heightened for container terminals containing multimodal transportation systems as they typically involve ships, rail, and trucks arriving to one or more terminals delivering containers of different sizes to several …

Benthic And Planktonic Microalgal Community Structure And Primary Productivity In Lower Chesapeake Bay, Matthew Reginald Semcheski

Biological Sciences Theses & Dissertations

Microalgal populations are trophically important to a variety of micro- and macroheterotrophs in marine and estuarine systems. In Chesapeake Bay, microalgae facilitate the survival and development of ecologically and economically relevant fauna, including shellfish and finfish populations. While regarded as significant components of coastal environments, microphytobenthic communities are historically understudied. In Chesapeake Bay, the importance of phytoplankton to the ecosystem is understood, but the contribution of microphytobenthos remains unclear. This project surveys intertidal microphytobenthic communities, in relation to phytoplankton communities, around lower Chesapeake Bay describing the taxonomic makeup of these populations, coupled with quantification of cell abundance, biomass, and primary …

Analyzing Cholera Dynamics In Homogeneous And Heterogeneous Environments, Drew Posny

Mathematics & Statistics Theses & Dissertations

Cholera continues to be a serious public health concern in developing countries and the global increase in the number of reported outbreaks suggests that activities to control the diseases and surveillance programs to identify or predict the occurrence of the next outbreaks are not adequate. Mathematical models play a critical role in predicting and understanding disease mechanisms, and have long provided basic insights in the possible ways to control infectious diseases. This dissertation is concerned with mathematical modeling and analysis of cholera dynamics. First, we study an autonomous model in a homogeneous environment with added controls that involves both direct …

Ray- And Wave-Theoretic Approach To Electromagnetic Scattering From Radially Inhomogeneous Spheres And Cylinders, Michael A. Pohrivchak

Mathematics & Statistics Theses & Dissertations

With applications in the areas of chemistry, physics, microbiology, meteorology, radar, astronomy, and many other fields, electromagnetic scattering is an important area of research. Many everyday phenomena that we experience are a result of the scattering of electromagnetic and acoustic waves. In this dissertation, the scattering of plane electromagnetic waves from radially inhomogeneous spheres and cylinders using both ray- and wave-theoretic principles is considered. Chapters 2 and 3 examine the use of the ray approach. The deviation undergone by an incident ray from its original direction is related to the angle through which the radius vector turns from the point …

Modeling And Simulation Of Shape Changes Of Red Blood Cells In Shear Flow, John Gounley

Mathematics & Statistics Theses & Dissertations

A description of the biomechanical character of red blood cells is given, along with an introduction to current computational schemes which use deformable capsules to simulate red blood cell shape change. A comprehensive two- and three-dimensional framework for the fluid-structure interaction between a deformable capsule and an ambient flow is provided. This framework is based on the immersed boundary method, using lattice Boltzmann and finite element methods for the fluid and structure, respectively. The characteristic response and recovery times of viscoelastic circular and spherical capsules are compared, and their dependence on simulation parameters is shown. The shape recovery of biconcave …

Markov Chain Monte Carlo Bayesian Predictive Framework For Artificial Neural Network Committee Modeling And Simulation, Michael S. Goodrich

Computational Modeling & Simulation Engineering Theses & Dissertations

A logical inference method of properly weighting the outputs of an Artificial Neural Network Committee for predictive purposes using Markov Chain Monte Carlo simulation and Bayesian probability is proposed and demonstrated on machine learning data for non-linear regression, binary classification, and 1-of-k classification. Both deterministic and stochastic models are constructed to model the properties of the data. Prediction strategies are compared based on formal Bayesian predictive distribution modeling of the network committee output data and a stochastic estimation method based on the subtraction of determinism from the given data to achieve a stochastic residual using cross validation. Performance for Bayesian …

Modeling Stem Cell Population Dynamics, Samiur Arif

Computer Science Theses & Dissertations

Because of the stochastic nature of biological systems, mathematical and computational modeling approaches have become more acceptable to experimentalists and clinicians in recent years as contributing to new understandings of complicated cell mechanisms and tissue physiology. Indeed, even single cell or small tissue samples are complex dynamic systems that adapt to environmental challenges in space and time which is poorly understood. Mathematical models and computer simulations can explain and uncover unknown aspects of cell behavior and tissue functions. Models based on key biological mechanisms can give interesting insights and formulate predictions that cannot be derived from physical experiments or statistical …

Assessing The Impact Of Electronic Health Record Systems Implementation On Hospital Patient Perceptions Of Care, Katherine Sofia Palacio Salgar

Engineering Management & Systems Engineering Theses & Dissertations

The delivery of health care services has been impacted by advances in Knowledge Management Information Systems (KMIS) and Information Technology (IT). The literature reveals that Electronic Health Records Systems (EHRs) are a comprehensive KMIS. There is a wide recognition in the body of knowledge that demonstrates the potential of EHRs to transform all aspects of health care services and, in consequence, the performance of Health Care Delivery Organizations (HCDO). Authors of published research also agree that there is a need for more empirical contributions that demonstrate the impact of EHRs upon HCDO. It is argued that in most cases, studies …

Determination Of The Ecological Condition Of Benthic Communities Affected By Polycyclic Aromatic Hydrocarbons In The Elizabeth River, Chesapeake Bay, Usa, Adam M. Webb

Biological Sciences Theses & Dissertations

The Southern Branch of the Elizabeth River, a tributary of Chesapeake Bay, has historically been polluted with hydrocarbon based industrial by-products. My study compared benthic community condition from two locations in the Southern Branch: the subtidal region near Money Point, historically affected by pollution of polycyclic aromatic hydrocarbons (PAHs), to a subtidal region near Blows Creek on the opposite shore that is putatively designated as unimpacted by P AH contamination. Samples from both study sites in the Southern Branch were compared to the benthic community condition of samples from the same habitat type designations collected as part of the Chesapeake …

Web Archive Services Framework For Tighter Integration Between The Past And Present Web, Ahmed Alsum

Computer Science Theses & Dissertations

Web archives have contained the cultural history of the web for many years, but they still have a limited capability for access. Most of the web archiving research has focused on crawling and preservation activities, with little focus on the delivery methods. The current access methods are tightly coupled with web archive infrastructure, hard to replicate or integrate with other web archives, and do not cover all the users' needs. In this dissertation, we focus on the access methods for archived web data to enable users, third-party developers, researchers, and others to gain knowledge from the web archives. We build …

Direct Measurements Of Two Photon Exchange On Lepton-Proton Elastic Scattering Using Simultaneous Electron-Positron Beams In Clas, Dasuni Kalhari Adikaram

Physics Theses & Dissertations

The electric (GE) and magnetic ( GM) form factors of the proton are fundamental observables which characterize its charge and magnetization distributions. There are two methods to measure the proton form factors: the Rosenbluth separation method and the polarization transfer technique. However, the ratio of the electric and magnetic form factors measured by those methods significantly disagree at momentum transfer Q² > 1 GeV². The most likely explanation of this discrepancy is the inclusion of two-photon exchange (TPE) amplitude contributions to the elastic electron-proton cross section which significantly changes the extraction of GE from the …

Computational Solutions Of The Forward And Adjoint Euler Equations With Application To Duct Aeroacoustics, Ibrahim Kocaogul

Mathematics & Statistics Theses & Dissertations

Traditionally, the acoustic source terms are modeled by single frequency sinusoidal functions. In the present study, the acoustic sources are modeled by a broadband wave packet. Radiation of acoustic waves at all frequencies can be obtained by Time Domain Wave Packet (TDWP) method in a single time domain computation. The TDWP method is also particularly useful for computations in the ducted or waveguide environments where incident wave modes can be imposed cleanly without a potentially long transient period. Theoretical analysis as well as numerical validation are performed in this study. In addition, the adjoint equations for the linearized Euler equations …

Agenda, Hr Adaptation Forum

March 28, 2014: Addressing Current and Future Vulnerability through Floodplain Management

No abstract provided.

The Community Rating System And Sea Level Rise Adaptation, Shannon Hulst

March 28, 2014: Addressing Current and Future Vulnerability through Floodplain Management

No abstract provided.

Fema Region Iii Coastal Flood Study - Hampton Roads Adaptation Forum, Robin Danforth

March 28, 2014: Addressing Current and Future Vulnerability through Floodplain Management

No abstract provided.

Floodplain Management Ordinance: Virginia Beach, Whitney Mcnamara

March 28, 2014: Addressing Current and Future Vulnerability through Floodplain Management

No abstract provided.

The Effects Of Changing Winds And Temperatures On The Oceanography Of The Ross Sea In The 21st Century, Walker O. Smith, Michael S. Dinniman, Eileen E. Hofmann, John M. Klinck

CCPO Publications

The Ross Sea is critically important in regulating Antarctic sea ice and is biologically productive, which makes changes in the region's physical environment of global concern. We examined the effects of projected changes in atmospheric temperatures and winds on aspects of the ocean circulation likely important to primary production using a high-resolution sea ice-ocean-ice shelf model of the Ross Sea. The modeled summer sea-ice concentrations decreased by 56% by 2050 and 78% by 2100. The duration of shallow mixed layers over the continental shelf increased by 8.5 and 19.2days in 2050 and 2100, and the mean summer mixed layer depths …