Physical Sciences and Mathematics Commons^™

Intra-Annual Variation In The Stable Oxygen And Carbon And Trace Element Composition Of Sclerosponges, P. K. Swart, S. Thorrold, B. Rosenheim, A. Eisenhauer, C. G. A. Harriason, M. Grammer, C. Latkoczy

Biological Sciences Faculty Publications

This paper presents data to support the presence of (1) intra-annual signals in the chemical composition (δ¹⁸O and Sr/Ca) of the skeletons ofsclerosponges from the Bahamas and (2) variable rates of skeletal accretion. These conclusions are based on data obtained by using a microsampling method for the stable oxygen and carbon isotopes in which material was extracted at a resolution of one sample every 34 μm and a laser microprobe which obtained trace element data every 20 μm (Sr, Mg, and Pb). An age model was established using a combination of changes in the concentration of Pb, the …

Distribution Of The Euryhaline Squid Lolliguncula Brevis In Chesapeake Bay: Effects Of Selected Abiotic Factors, I. K. Bartol, R. Mann, M. Vecchione

Biological Sciences Faculty Publications

The majority of cephalopods are thought to have limitations arising from physiology and locomotion that exclude them from shallow, highly variable, euryhaline environments. The brief squid Lolliguncula brevis may be a notable exception because it tolerates low salinities, withstands a wide range of environmental conditions, and swims readily in shallow water. Little is known about the distribution of L. brevis in Chesapeake Bay, a diverse and highly variable estuary. Therefore, a survey of L. brevis was conducted in the Virginia portion of Chesapeake Bay from 1993 to 1997 using a 9.1 m otter trawl, and the effects of selected factors …

Effects Of Nonequilibrium Atmospheric Pressure Plasmas On The Heterotrophic Pathways Of Bacteria And On Their Cell Morphology, Mounir Laroussi, J. Paul Richardson, Fred C. Dobbs

OES Faculty Publications

To date, most research on the interaction of nonequilibrium, atmospheric pressure plasma discharges with bacteria has concentrated on the germicidal effects. Therefore, published results deal mainly with killing efficacy and little attention is given to physical mechanisms and biochemical pathways and their potential alterations when cells of microorganisms are exposed to the plasma. In this letter, an attempt to investigate the effects of plasma exposure on the biochemical pathways of bacteria is presented. In addition, using electron microscopy, we investigate if any gross morphological changes take place when cells are exposed to a lethal dose of plasma. We are testing …

Electrical Network-Based Time-Dependent Model Of Electrical Breakdown In Water, R. P. Joshi, J. Qian, K. H. Schoenbach

Bioelectrics Publications

A time-dependent, two-dimensional, percolative approach to model dielectric breakdown based on a network of parallel resistor–capacitor elements having random values, has been developed. The breakdown criteria rely on a threshold electric field and on energy dissipation exceeding the heat of vaporization. By carrying out this time-dependent analysis, the development and propagation of streamers and prebreakdown dynamical evolution have been obtained directly. These model simulations also provide the streamer shape, characteristics such as streamer velocity, the prebreakdown delay time, time-dependent current, and relationship between breakdown times, and applied electric fields for a given geometry. The results agree well with experimental data …

The Transformation Of Iodate To Iodide In Marine Phytoplankton Cultures, George T. F. Wong, Ajcharaporn U. Piumsomboon, William M. Dunstan

OES Faculty Publications

Six species of phytoplankton, representing 6 major phylogenetic groups (2 oceanic species: a cyanobacteria, Synechococcus sp., and a coccolithophorid, Emiliania huxleyi; and 4 coastal species: a prasinophyte, Tetraselmis sp., the green algae Dunaliella tertiolecta, the diatom Skeletonema costatum and a dinoflagellate Amphidinium carterae) were tested for their ability to reduce iodate to iodide in batch cultures. They all did so to varying degrees. Thus, the reduction of iodate to iodide by phytoplankton may be a general phenomenon in the marine environment. At ambient concentrations of iodate, the rates of depletion of iodate and appearance of …

Length-At-Age In Juvenile Patagonian Toothfish (Dissostichus Eleginoides), J. Ashford, C. Jones, S. Bobko, I. Everson

OES Faculty Publications

We used the otoliths from a sample of Dissostichus eleginoides pre-recruits, whose length density was distinctly polymodal, to see whether ages estimated by reading otoliths were congruent with the length modes observed. Length densities by age were compared graphically with the overall length density observed. Additionally, ages were predicted for each fish based on length, and compared with ages estimated from reading otoliths in a goodness-of-fit test. The majority of the otoliths (83.6%) were estimated to be from fish 1+ or 2+ years old, with mean total lengths of 32.5 cm and 41.3 cm respectively. No difference was found between …

The Effect Of Surface Curvature On Wound Healing In Bone, J. A. Adam

Mathematics & Statistics Faculty Publications

The time-independent nonhomogeneous diffusion equation is solved for the equilibrium distribution of wound-induced growth factor over a hemispherical surface. The growth factor is produced at the inner edge of a circular wound and stimulates healing in regions where the concentration exceeds a certain threshold value. An implicit analytic criterion is derived for complete healing of the wound. (C) 2001 Elsevier Science Ltd. All rights reserved.

A Scalable Architecture For Harvest-Based Digital Libraries, Xiaoming Liu, Tim Brody, Stevan Harnard, Les Carr, Kurt Maly, Mohammad Zubair, Michael L. Nelson

Computer Science Faculty Publications

This article discusses the requirements of current and emerging applications based on the Open Archives Initiative (OAI) and emphasizes the need for a common infrastructure to support them. Inspired by HTTP proxy, cache, gateway and web service concepts, a design for a scalable and reliable infrastructure that aims at satisfying these requirements is presented. Moreover, it is shown how various applications can exploit the services included in the proposed infrastructure. The article concludes by discussing the current status of several prototype implementations.

Fast Inner Product Computation On Short Buses, R. Lin, S. Olariu

Computer Science Faculty Publications

We propose a VLSI inner product processor architecture involving broadcasting only over short buses (containing less than 64 switches). The architecture leads to an efficient algorithm for the inner product computation. Specifically, it takes 13 broadcasts, each over less than 64 switches, plus 2 carry-save additions (t_csa) and 2 carry-lookahead additions (t_cla) to compute the inner product of two arrays of N = 2⁹ elements, each consisting of m = 64 bits. Using the same order of VLSI area, our algorithm runs faster than the best known fast inner product algorithm of Smith and Torng …

Object Persistence And Availability In Digital Libraries, Michael L. Nelson, B. Danette Allen

Computer Science Faculty Publications

We have studied object persistence and availability of 1,000 digital library (DL) objects. Twenty World Wide Web accessible DLs were chosen and from each DL, 50 objects were chosen at random. A script checked the availability of each object three times a week for just over 1 year for a total of 161 data samples. During this time span, we found 31 objects (3% of the total) that appear to no longer be available: 24 from PubMed Central, 5 from IDEAS, 1 from CogPrints, and 1 from ETD.

Federated Searching Interface Techniques For Heterogeneous Oai Repositories, Xiaoming Liu, Kurt Maly, Mohammad Zubair, Qiaoling Hong, Michael L. Nelson, Frances Knudson, Irma Holtkamp

Computer Science Faculty Publications

Federating repositories by harvesting heterogeneous collections with varying degrees of metadata richness poses a number of challenging issues: (1) how to address the lack of uniform control for various metadata fields in terms of building a rich unified search interface, and (2) how easily new collections and freshly harvested data in existing repositories can be incorporated into the federation supporting a unified interface? This paper focuses on the approaches taken to address these issues in Arc, an Open Archives Initiative compliant federated digital library. At present Arc contains over 1M metadata records from 75 data providers from various subject domains. …

The Single Row Routing Problem Revisited: A Solution Based On Genetic Algorithms, Albert Y. Zomaya, Roger Karpin, Stephan Olariu

Computer Science Faculty Publications

With the advent of VLSI technology, circuits with more than one million transistors have been integrated onto a single chip. As the complexity of ICs grows, the time and money spent on designing the circuits become more important. A large, often dominant, part of the cost and time required to design an IC is consumed in the routing operation. The routing of carriers, such as in IC chips and printed circuit boards, is a classical problem in Computer Aided Design. With the complexity inherent in VLSI circuits, high performance routers are necessary. In this paper, a crucial step in the …

Impact Of Sea Grass Density On Carbonate Dissolution In Bahamian Sediments, David J. Burdige, Richard C. Zimmerman

OES Faculty Publications

Carbonate dissolution has been widely observed in shallow water tropical sediments. However, sediment budgets C have generally not been closed with respect to the amount of acid required to produce the observed carbonate dissolution. Recently it has been suggested that enhanced oxygen transport into sediments through the roots and rhizomes of sea grasses might play a role in resolving this mass balance problem. We conducted studies of sea grass-carbonate sediment interactions around Lee Stocking Island, Exuma Islands, Bahamas to further examine this problem. Our studies showed that alkalinity, total dissolved inorganic carbon (ΣCO₂) and Ca²⁺ increased with …

Microbial Ecology Of Ballast Water During A Transoceanic Voyage And The Effects Of Open-Ocean Exchange, Lisa A. Drake, Gregory M. Ruiz, Bella S. Galil, Timothy L. Mullady, Daniela O. Friedmann, Fred C. Dobbs

OES Faculty Publications

The only procedure used frequently to reduce the risk of invasion by ballast-mediated biota is open-ocean exchange of ballast water, a procedure in which vessels release coastal water and replace it with oceanic water. Limited information exists concerning the effects of transport upon the aquatic microbial community throughout transit and following open-ocean exchange, A transoceanic voyage aboard a commercial bulk carrier afforded us the opportunity to sample the microbial community in exchanged and unexchanged ballast-water holds during the journey from Hadera, Israel to Baltimore, USA. Five days following the exchange process, all microbial metrics tested (i.e. bacteria concentration, virus-like particle …

Response Of Anchovy (Engaulis Ringens) Off Northern Chile To The 1997-1999 El Niño-La Niña Sequence, José L. Blanco, Patricio Barria, Jorge Castillo, Larry P. Atkinson

CCPO Publications

No abstract provided.

Wintertime Shoreward Near-Surface Currents South Of Cape Hatteras, Dana K. Savidge

CCPO Publications

[1] Cross-isobath flow on continental shelves is of interest for a variety of reasons. Near Cape Hatteras, North Carolina, the transport of larval organisms, pollutants, and oceanic carbon budget constituents to and from the adjacent Albemarle and Pamlico Sounds may depend critically on cross-isobath currents. Shoreward currents in the near-surface waters south of Cape Hatteras are documented herein, on the basis of continuous 2-year time series, encompassing all or part of three consecutive winters. Energetic shoreward currents exist similar to30% of the time from midfall through late spring. These currents are evident over the 20 and 35 m isobaths along …

Arctic Ice Export Events And Their Potential Impact On Global Climate During The Late Pleistocene, Dennis A. Darby, Jens F. Bischof, Robert F. Spielhagen, Steven A. Marshall, Stephen W. Herman

OES Faculty Publications

Ice sheets in the North American Arctic and, to a lesser extent, those in northern Eurasia calved large quantities of icebergs that drifted through Fram Strait into the Greenland Sea several times during the late Pleistocene. These icebergs deposited Fe oxide grains (45-250 mum) and coarse lithic clasts >250 mum matched to specific circum-Arctic sources. Four massive Arctic iceberg export events are identified from the Laurentide and the Innuitian ice sheets, between 14 and 34 ka (calendar years) in a sediment core from Fram Strait. These relatively short duration (<1-4 kyr) events contain 3-5 times the background levels of Fe oxide grains. They began suddenly, as indicated by a steep rise in the number of grains matched to an ice sheet source, suggesting rapid purges of ice through Fram Strait, due perhaps to collapse of ice sheets. The larger events from the northwestern Laurentide ice sheet are preceded by events from the Innuitian ice sheet. Despite the chronological uncertainties, the Arctic export events appear to occur prior to Heinrich events.

Η Photoproduction On The Proton For Photon Energies From 0.75 To 1.95 Gev, M. Bektasoglu, K. V. Dharmawardane, G. E. Dodge, C. E. Hyde-Wright, A. Klein, S. E. Kuhn, S. Stepanyan, J. Yun, Et Al., Clas Collaboration

Physics Faculty Publications

Differential cross sections for γp→ηp have been measured with tagged real photons for incident photon energies from 0.75 to 1.95 GeV. Mesons were identified by missing mass reconstruction using kinematical information for protons scattered in the production process. The data provide the first extensive angular distribution measurements for the process above W = 1.75  GeV. Comparison with preliminary results from a constituent quark model support the suggestion that a third S₁₁ resonance with mass ∼1.8  GeV couples to the ηN channel.

Publisher's Note: Η Photoproduction On The Proton For Photon Energies From 0.75 To 1.95 Gev [Phys. Rev. Lett. 89, 222002 (2002)], M. Bektasoglu, K. V. Dharmawardane, G. E. Dodge, C. E. Hyde-Wright, A. Klein, S. E. Kuhn, R. A. Niyazov, S. Stepanyan, L. B. Weinstein, Et Al., Clas Collaboration

Physics Faculty Publications

No abstract provided.

Healing Times For Circular Wounds On Plane And Spherical Bone Surfaces, J. A. Adam

Mathematics & Statistics Faculty Publications

A mathematical model is developed for the rate of healing of a circular wound in a spherical "skull". The motivation for this model is based on experimental studies of the "'critical size defect" (CSD) in animal models; this has been defined as the smallest intraosseous wound that does not heal by bone formation during the lifetime of the animal [1]. For practical purposes, this timescale can usually be taken as one year. In [2], the definition was further extended to a defect which has less than ton percent bony regeneration during the lifetime of the animal. CSDS can "heal" by …

Advances In Space Radiation Shielding Codes, John W. Wilson, Ram K. Tripathi, Garry D. Qualls, Francis A. Cucinotta, Richard E. Prael, John W. Norbury, John H. Heinbockel, John Tweed, Giovanni De Angelis

Mathematics & Statistics Faculty Publications

Early space radiation shield code development relied on Monte Carlo methods and made important contributions to the space program. Monte Carlo methods have resorted to restricted one-dimensional problems leading to imperfect representation of appropriate boundary conditions. Even so, intensive computational requirements resulted and shield evaluation was made near the end of the design process. Resolving shielding issues usually had a negative impact on the design. Improved spacecraft shield design requires early entry of radiation constraints into the design process to maximize performance and minimize costs. As a result, we have been investigating high-speed computational procedures to allow shield analysis from …

Like A Bridge Over Colored Water: A Mathematical Review Of The Rainbow Bridge: Rainbows In Art, Myth, And Science, John A. Adam

Mathematics & Statistics Faculty Publications

Commenting on a recent book, the author discusses various views of the rainbow: its role in culture, its scientific description, and its mathematical theory.

Nitrate Anomaly In The Upper Nutricline In The Northern South China Sea - Evidence For Nitrogen Fixation, George T. F. Wong, Shi-Wei Chung, Fuh-Kwo Shiah, Chung-Chi Chen, Liang-Saw Wen, Kon-Kee Liu

OES Faculty Publications

[1] Up to 2 μM of nitrate anomaly, N*, were found in the upper nutricline at the South East Asia Time-series Study (SEATS) site in the northern South China Sea (SCS). These concentrations were among the higher values reported in the Pacific and indicate the significant contribution of the remineralization of nitrogen-rich organic matter formed by nitrogen fixation to the nutrient dynamics of the area. The concentrations were systematically higher, by up to 2.5 μM, in the Fall through the early Spring, during the northeast monsoon, than in the Summer, suggesting that the impact of nitrogen fixation was higher during …

Negative-Parity Baryon Masses Using An O(A)-Improved Fermion Action, M. Göckeler, R. Horsley, D. Pleiter, P. E. L. Rakow, G. Schierholz, C. M. Maynard, D. G. Richards

Physics Faculty Publications

We present a calculation of the mass of the lowest-lying negative-parity J=1/2− state in quenched QCD. Results are obtained using a non-perturbatively O(a)-improved clover fermion action, and a splitting is found between the mass of the nucleon, and its parity partner. The calculation is performed on two lattice volumes and at three lattice spacings, enabling a study of both finite-volume and finite lattice-spacing uncertainties. A comparison is made with results obtained using the unimproved Wilson fermion action.

Peptide Hydrolysis, Amino Acid Oxidation, And Nitrogen Uptake In Communities Seasonally Dominated By Aureococcus Anophagefferens, Margaret R. Mulholland, Christopher J. Gobler, Cindy Lee

OES Faculty Publications

Elevated levels of dissolved organic nitrogen (DON) and dissolved inorganic nitrogen (DIN) are among the factors implicated in the initiation of algal blooms. However, the degree to which phytoplankton augment their autotrophic metabolism with heterotrophic uptake of organic carbon that is associated with DON is unknown. We evaluated the relative importance of peptide hydrolysis, amino acid oxidation, and amino acid uptake over a seasonal cycle in an embayment on Long Island, New York, that had high concentrations of dissolved organic matter (DOM) and a bloom of the brown tide pelagophyte, Aureococcus anophagefferens. Amino acids were a significant component (up …

First Measurement Of The Double Spin Asymmetry In →E→P → E ‘Π⁺ In The Resonance Region, G. E. Dodge, K. V. Dharmawardane, T. A. Forest, C. E. Hyde-Wright, A. Klein, S. E. Kuhn, R. A. Niyazov, L. B. Weinstein, J. Yun, Et. Al., Clas Collaboration

Physics Faculty Publications

The double spin asymmetry in the ^→e^→p → e' π⁺n reaction has been measured for the first time in the resonance region for four-momentum transfer Q² = 0.35-1.5 GeV². Data were taken at Jefferson Lab with the CLAS detector using a 2.6 GeV polarized electron beam incident on a polarized solid NH₃ target. Comparison with predictions of phenomenological models shows strong sensitivity to resonance contributions. Helicity-1/2 transitions are found to be dominant in the second and third resonance regions. The measured asymmetry is consistent with a faster rise with Q^{2 …}

Video Indexing And Retrieval Techniques Using Novel Approaches To Video Segmentation, Characterization, And Similarity Matching, Waleed Ezzat Farag

Computer Science Theses & Dissertations

Multimedia applications are rapidly spread at an ever-increasing rate introducing a number of challenging problems at the hands of the research community, The most significant and influential problem, among them, is the effective access to stored data. In spite of the popularity of keyword-based search technique in alphanumeric databases, it is inadequate for use with multimedia data due to their unstructured nature. On the other hand, a number of content-based access techniques have been developed in the context of image indexing and retrieval; meanwhile video retrieval systems start to gain wide attention, This work proposes a number of techniques constituting …

Performance Modeling And Prediction For The Scalable Solution Of Partial Differential Equations On Unstructured Grids, Dinesh Kumar Kaushik

Computer Science Theses & Dissertations

This dissertation studies the sources of poor performance in scientific computing codes based on partial differential equations (PDEs), which typically perform at a computational rate well below other scientific simulations (e.g., those with dense linear algebra or N-body kernels) on modern architectures with deep memory hierarchies. We identify that the primary factors responsible for this relatively poor performance are: insufficient available memory bandwidth, low ratio of work to data size (good algorithmic efficiency), and nonscaling cost of synchronization and gather/scatter operations (for a fixed problem size scaling). This dissertation also illustrates how to reuse the legacy scientific and engineering software …

A Policy-Based Resource Brokering Environment For Computational Grids, Ahmed Hamdan Al-Theneyan

Computer Science Theses & Dissertations

With the advances in networking infrastructure in general, and the Internet in particular, we can build grid environments that allow users to utilize a diverse set of distributed and heterogeneous resources. Since the focus of such environments is the efficient usage of the underlying resources, a critical component is the resource brokering environment that mediates the discovery, access and usage of these resources. With the consumer's constraints, provider's rules, distributed heterogeneous resources and the large number of scheduling choices, the resource brokering environment needs to decide where to place the user's jobs and when to start their execution in a …

Geometric Integrators For Hamiltonian Pdes, Dmitry Karpeev

Computer Science Theses & Dissertations

We consider methods for systematic construction of algorithms for a class of time-dependent PDEs with Hamiltonian structure. These systems possess phase space geometry and constants of the motion that need to be preserved by the integration algorithm to reflect the qualitative features of the system.

We exploit the structure of Hamiltonian systems, in particular their variational formulation based on a Lagrangian, and the dual covariant formulation, to expose the geometric features of the system that have natural analogs when discretized. We emphasize the local space-time approach to the constructions, making them amenable to parallelization and preconditioning using domain decomposition methods, …