Systems Biology Commons^™

Book Review: The Iowa Lakeside Laboratory: A Century Of Discovering The Nature Of Nature. Michael J. Lannoo., Bonnie S. Bowen

The Prairie Naturalist

Iowa Lakeside Laboratory (a.k.a. Lakeside Lab) is one of several biological field stations that were established in the early 1900s and that have active educational and research programs today. Michael Lannoo’s account of the history of Lakeside Lab was initiated at the centennial celebration of the lab in 2009. Lannoo’s own connection with Iowa Lakeside Laboratory began as a student at Iowa State University and continues today as a member of the Lakeside Lab summer faculty and as Associate Director of Academics and Research. In his book, Lannoo describes field stations, and Lakeside Lab in particular, as educational institutions that …

Book Reviews: Video Surveillance Of Nesting Birds. Edited By Christine A. Ribic, Frank R. Thompson Iii, And Pamela J. Pietz., Marissa A. Ahlering

The Prairie Naturalist

Observations and studies of nests have been a central component of ornithology since its inception. Until recently, studies of nesting ecology were limited to human observation, making some types of information nearly impossible to obtain, such as nocturnal behavior, or difficult to study with adequate sample sizes, such as provisioning behaviors or cause of nest failure. The use of video photography to study the nesting biology of birds has exploded in the past decade, and the most recent volume of Studies in Avian Biology, Video Surveillance of Nesting Birds, has done a nice job of summarizing the history of camera …

Mate Replacement And Alloparental Care In Ferruginous Hawk (Buteo Regalis), Shubham Datta, Will M. Inselman, Jonathan A. Jenks, Kent C. Jensen, Christopher C. Swanson, Robert W. Klaver, Indrani Sasmal, Troy W. Grovenburg

The Prairie Naturalist

Alloparental care (i.e., care for unrelated offspring) has been documented in various avian species (Maxson 1978, Smith et al. 1996, Tella et al. 1997, Lislevand et al. 2001, Literak and Mraz 2011). A male replacement mate that encounters existing broods has options, which include alloparental care or infanticide. Infanticide may be beneficial in some species (Rohwer 1986, Kermott et al. 1990), but in long-lived avian species, like the ferruginous hawk (Buteo regalis) that do not renest within a season, infanticide might be detrimental. Adoption and rearing success likely provide direct evidence of competence of replacement mates as potential parents for …

Multi-Scale Habitat Use Of Male Ruffed Grouse In The Black Hills National Forest, Cassandra L. Mehls, Kent C. Jensen, Mark A. Rumble, Michael C. Wimberly

The Prairie Naturalist

Ruffed grouse (Bonasa umbellus) are native upland game birds and a management indicator species (MIS) for aspen (Populus tremuloides) in the Black Hills National Forest (Black Hills). Our objective was to assess resource selection of male ruffed grouse to identify the most appropriate scale to manage for aspen and ruffed grouse in the Black Hills. During spring 2007 and 2008, we conducted drumming surveys throughout the central and northern Black Hills to locate used and unused sites from which we compared habitat characteristics at increasing spatial scales. Aspen with >70% overstory canopy cover (OCC) was important to the occurrence of …

Making Nature Whole: A History Of Ecological Restoration. William R. Jordan Iii And George M. Lubick., Daryl D. Smith

The Prairie Naturalist

Ecological restoration—the process of assisting the recovery of ecosystems that have been degraded, damaged, or destroyed—is being incorporated into the fabric of our society. The practice of ecological restoration of natural areas developed and grew in the twentieth century in response to widespread human disturbance of natural communities. Undoubtedly, this type of restoration will continue to increase in importance in the coming decades given the extensive alteration of ecosystems that is occurring and that is showing no signs of abating.

As indicated in the promotional material for Making Nature Whole, Jordan and Lubick have provided a seminal publication for the …

Notes: Bed-Site Selection By Neonatal White-Tailed Deer In Central North Dakota, Brian A. Schaffer, Jonathan A. Jenks, Troy W. Grovenburg, William F. Jensen

The Prairie Naturalist

Understanding bed-site selection and vegetation characteristics provides valuable information for population management (Verme 1977, Huegel et al. 1985a, Nelson and Woolf 1987). Predation and other natural-caused mortalities of white-tailed deer (Odocoileus virginianus) neonates are most likely to occur within the first 60 days of life; a time period when selected habitat characteristics are vital to survival (Verme 1977, Hue- gel et al. 1985a, Nelson and Woolf 1987, Grovenburg et al. 2010). Prior to the study of Grovenburg et al. (2010), limited research had been completed on the bed-site selection of neonatal white-tailed deer in the grasslands of the Northern Great …

The Equitable Contributions Of Environment, Management And Restoration Status On Grassland Diversity And Composition, Raeann C. Powers

School of Biological Sciences: Dissertations, Theses, and Student Research

Plant composition is controlled by a combination of environmental, biotic, historical and management factors. Although there has been much focus on restoring grassland diversity, it is unclear which factors and/or interactions of factors are constraining diversity in grasslands and the relative influences of different factors. We measured soil fertility, soil texture, grazing intensity, fire frequency and plant cover in 694 plots, located within 33 remnant and restored fields in managed grasslands in the central Great Plains. Using univariate (general linear model) and multivariate (PERMANOVA) analyses, we identified significant factors and their relative contributions to plant richness, evenness, floristic quality index …

Patch Burn‐Grazing: An Annotated Bibliography, Rajeeva Voleti, Stephen L. Winter, Sherry Leis

School of Natural Resources: Faculty Publications

Patch burn‐grazing is a rangeland management strategy that exploits the attraction of grazing animals to recently burned areas in order to achieve management objectives. When fire is applied to a landscape in a patchy manner, leaving some patches unburned, the resulting grazing animal activity, forage utilization, and animal impact are patchily distributed within that landscape as well. Areas that have been recently burned tend to be characterized by the highest levels of grazing animal activity while areas that have gone the longest without burning tend to be characterized by the lowest levels of grazing animal activity. This can be advantageous …

Progress Towards A Molecular Phylogeny Of Tachinidae, Year Two, Isaac S. Winkler, John O. Stireman Iii, John K. Moulton, Pierfilippo Cerretti, Jeremy D. Blaschke

Biological Sciences Faculty Publications

We reported last year (Stireman et al. 2013) in The Tachinid Times on our collaborative project, funded by the U.S. National Science Foundation, to study the phylogeny of Tachinidae on a worldwide scale. Since that report, we have made some significant progress towards our goal of assembling a robust phylogenetic tree for Tachinidae. Notably, Cerretti et al. (in press) completed a phylogenetic study using 135 morphological characters from 180 tachinid genera. Results from this study largely reflect, with some interesting exceptions, what we are finding from preliminary analyses of our molecular data. Although sampling of taxa and genes for the …

Chasing Tachinids ‘Down Under’: Expeditions Of The Phylogeny Of World Tachinidae Project, Part Ii Eastern Australia, James E. O'Hara, Pierfilippo Cerretti, John O. Stireman Iii, Isaac S. Winkler

Biological Sciences Faculty Publications

Last year we documented in the pages of this newsletter an expedition to the Western Cape of South Africa in search of tachinids for the “Phylogeny of World Tachinidae” project (Cerretti et al. 2013). The project itself was discussed in a separate article (Stireman et al. 2013). In this issue of The Tachinid Times we discuss our expedition to eastern Australia in late 2013. This trip took place so recently that we have yet to fully identify our material and as a result cannot record here all of the taxa we collected. Instead, we will add the taxa to a …

Rates And Modes Of Sequence Evolution In Various Lineages Within Chenopodiaceae, James Andrew Naeger

Wayne State University Theses

Sexual dimorphism in domesticated spinach, Spinacia oleracea, is thought to be determined by differential expression of floral organ identity genes. We examined the floral organ morphologies of seven species in the Chenopodiaceae, including two wild species of spinach, in order to gain insight into the evolution of floral reproductive strategy in this clade. The species within the Anserineae demonstrate extensive evolution in floral morphology and reproductive strategy, and Spinacia is unique for having been domesticated rather recently and for being dioecious. We found C. album to be hermaphroditic, C. foliosum and M. nuttalliana to be gynomonoecious, while C. bonus-henricus …

Native Insect Herbivory Limits Population Growth Rate Of A Non-Native Thistle, James O. Eckberg, Brigitte Tenhumberg, Svata M. Louda

Brigitte Tenhumberg Papers

The influence of native fauna on non-native plant population growth, size, and distribution is not well documented. Previous studies have shown that native insects associated with tall thistle (Cirsium altissimum) also feed on the leaves, stems, and flower heads of the Eurasian congener Cirsium vulgare, thus limiting individual plant performance. In this study, we tested the effects of insect herbivores on the population growth rate of C. vulgare. We experimentally initiated invasions by adding seeds at four unoccupied grassland sites in eastern Nebraska, USA, and recorded plant establishment, survival, and reproduction. Cumulative foliage and floral herbivory …

Dual Capture Of A Piñon Deer Mouse And A Silky Pocket Mouse Resulting In Consumption Of The Smaller Animal, Jon C. Pigage, Roger D. Peyton

The Prairie Naturalist

Intraspecific dual captures of rodents are uncommon, but not rare. There are several reports of brown rats (Rattus norvegicus), white-footed deer mice (Peromyscus leucopus), North American deer mice (P. maniculatus), western harvest mice (Reithrodontomys megalotis) and meadow voles (Microtus pennsylvanicus) caught simultaneously in the same trap (i.e. a door-closing live-trap; Davis 1955, Getz 1961, Blaustein and Rothstein 1978, Jenkins and Llewellyn 1981, Novak 1983). Some reports are incidental whereas others are interpreted as social associations or bonding between conspecifics. Interspecific dual captures are rarely reported in the literature. The earliest report of …

Red-Tailed Hawk Nesting In Kansas: Influence Of Landscape Characteristics, William Langley

The Prairie Naturalist

Factors that affect nest site selection in red-tailed hawks (Buteo jamaicensis) include the physical features surrounding the nest and landscape characteristics. Features surrounding nests include: tree height, tree diameter (dbh), percent canopy cover, slope, nest openness, and density of woody plants or shrubs (Titus and Mosher 1981, Bechard et al. 1990, Tietje et al. 1997, Actkinson et al. 2007). Landscape characteristics that influence nest-site selection by red-tailed hawks vary across regions. In Georgia, red-tailed hawks selected nest site in areas with greater area of agriculture and open pasture (Moorman and Chapman 1996), whereas in Oklahoma prairies, the hawks …

Use Of Seeded Exotic Grasslands By Wintering Birds, Andrew D. George, Timothy J. O'Connell, Karen R. Hickman, David M. Lesliee Jr.

The Prairie Naturalist

Despite widespread population declines of North American grassland birds, effects of anthropogenic disturbance on wintering habitat of this guild remain poorly understood. We compared avian abundance and habitat structure in fields planted to the exotic grass Old World bluestem (Bothriochloa ischaemum; OWB) to that in native mixed-grass prairie. During winters of 2007–2008 and 2008–2009, we conducted bird and vegetation surveys in six native grass and six OWB fields in Garfield, Grant, and Alfalfa counties, Oklahoma. We recorded 24 species of wintering birds in native fields and 14 species in OWB monocultures. While vegetation structure was similar between field …

Whooping Cranes Consume Plains Leopard Frogs At Migratory Stopover Sites In Nebraska, Keith Geluso, Brad T. Krohn, Mary J. Harner, Michael J. Assenmacher

The Prairie Naturalist

Whooping cranes (Grus americana) currently consist of a single, wild population that migrates annually from breeding grounds at Wood Buffalo National Park, Canada, to wintering grounds on and around the Aransas National Wildlife Refuge along the Texas coast, USA (NRC 2005). This population reached a low of less than 20 individuals in 1941 (Allen 1952) but has rebounded to over 250 individuals (Chavez-Ramirez and Wehtje 2012, Gil-Weir et al. 2012). Whooping cranes migrate approximately 4,000 km each spring and autumn, traversing much of the North American Great Plains (Lewis 1995) and periodically landing along rivers, wetlands, and other …

A Northward Range Extension Of The Hispid Cotton Rat (Sigmodon Hispidus) In Missouri, Cody W. Thompson, Elmer J. Finck

The Prairie Naturalist

The hispid cotton rat (Sigmodon hispidus) is a widely distributed rodent with a geographic range extending from north-central Mexico to southern Nebraska and central Virginia and from southeastern Arizona east to Florida (Carleton et al. 1999, Peppers and Bradley 2000, Wilson and Reeder 2005) with isolated populations in Arizona (Bradley et al. 2012) and California (Clark 1972). Range expansions for the species have been well documented (Clark 1972, Farney 1975, Benedict et al. 2000, Wright et al. 2010, Wills et al. 2011). The majority of these range expansions have occurred across the Central Plains during the 20th century …

Evaluation Of Three Nest Searching Methods For Ring-Necked Pheasant, Jeffery W. Stackhouse, Kevin K. Sedivec, Benjamin A. Geaumont

The Prairie Naturalist

Ring-necked pheasant (Phasianus colchicus) are a highly sought after game bird and as such, much research has been conducted regarding their ecology (Warner 1981, Trautman 1982, Johnson and Knue 1989). Perhaps the most investigated aspect of pheasant ecology is the species’ reproductive season (e.g. Linder et al. 1960, Dumke and Pils 1979, Leif 1994) with many studies focusing on nesting habitat (Baskett 1947, Clark et al. 1999). Results from previous research have acknowledged the difficulty associated with locating pheasant nests in their preferred cover types (Hanson 1970, Evrard 2000). Studies of pheasant nesting ecology have been based on …

How Important Is A Quality Manuscript Review?, Christopher N. Jacques

The Prairie Naturalist

Temperatures are finally starting to cool a bit (for those of us in the northern Great Plains region) and Thanksgiving break is just around the corner.

I offer my reflections in the spirit of encouraging each of you to take a break from your professional obligations and spend time with friends and family enjoying nature and everything it has to offer this fall.

Associations Between Iron Concentration And Productivity In Montane Streams Of The Black Hills, South Dakota, Cari-Ann Hayer, Benjamin M. Holocmb, Steven R. Chipps

The Prairie Naturalist

Iron is an important micronutrient found in aquatic systems that can influence nutrient availability (e.g. phosphorus) and primary productivity. In streams, high iron concentrations often are associated with low pH as a result of acid mine drainage, which is known to affect fish and invertebrate communities. Streams in the Black Hills of South Dakota are generally circumneutral in pH, yet select streams exhibit high iron concentrations associated with natural iron deposits. In this study, we examined relationships among iron concentration, periphyton biomass, macroinvertebrate abundance, and fish assemblages in four Black Hills streams. The stream with the highest iron concentration (~5 …

Salamander Colonization Of Chase Lake, Stutsman County, North Dakota, David M. Mushet, Kyle I. Mclean, Craig A. Stockwell

The Prairie Naturalist

Salt concentrations in lakes are dynamic. In the western United States, water diversions have caused significant declines in lake levels resulting in increased salinity, placing many aquatic species at risk (Galat and Robinson 1983, Beutel et al. 2001). Severe droughts can have similar effects on salt concentrations and aquatic communities (Swanson et al. 2003). Conversely, large inputs of water can dilute salt concentrations and contribute to community shifts (Euliss et al. 2004).

Chase Lake is a large, shallow, alkaline lake in east-central North Dakota most famously known for supporting one of the largest breeding colonies of the American white pelican …

A Simple Device For Measuring The Minimum Current Velocity To Maintain Semi-Buoyant Fish Eggs In Suspension, Julias S. Mueller, Brandon D. Cheek, Qingman Chen, Jillian Groeschel, Shannok K. Brewer, Timothy B. Grabowski

The Prairie Naturalist

Pelagic broadcast spawning cyprinids are common to Great Plains rivers and streams. This reproductive guild produces non-adhesive semi-buoyant eggs that require sufficient current velocity to remain in suspension during development. Although studies have shown that there may be a minimum velocity needed to keep the eggs in suspension, this velocity has not been estimated directly nor has the influence of physicochemical factors on egg buoyancy been determined. We developed a simple, inexpensive flow chamber that allowed for evaluation of minimum current velocity needed to keep semi-buoyant eggs in suspension at any time frame during egg development. The device described here …

Relationships Among Walleye Mercury, Selenium, Stable Isotopes, Size And Age, Mark J. Fincel, Robert P. Hanten, Shannon Minerich

The Prairie Naturalist

Bioaccumulation of mercury is well-documented in aquatic ecosystems and occurs as mercury is accumulated and passed up food chains (Kidd et al. 1995, Atwell et al. 1998, Downs et al. 1998). Trophic level correlations have been widely reported for mercury (Snodgrass et al. 2000) and other metals (Barron 1995). Generally, within a system, carnivores have the highest mercury loadings, omnivores intermediate and herbivores the lowest (Phillips et al. 1980). However, little research has focused on the differences in mercury bioaccumulation for a single species that ranges across multiple trophic levels (Burger et al. 2001).

Stable isotope analysis has expanded the …

Contributions Of Stocked And Naturally Reproduced Rainbow Trout In The Deerfield Reservoir System, Jacob L. Davis, Jerry W. Wilhite, Greg Simpson, Michael E. Barnes, Kaite N. Bertrand, David W. Willis

The Prairie Naturalist

Deerfield Reservoir in the Black Hills of South Dakota and its tributary system are managed as hatchery supplemented rainbow trout (Oncorhynchus mykiss) fisheries. Three genetically unique strains of rainbow trout (Shasta, Erwin and McConaughy) are stocked into the system. Recently, juvenile rainbow trout of unknown origin were collected in the tributary system above Deerfield Reservoir, indicating potential natural reproduction. Understanding the genetic origins and ability of these rainbow trout to contribute to the fishery is essential in determining the proper management strategy for these waters. Our objectives were to 1) evaluate the genetic origins of potentially naturally reproduced rainbow trout …

Distribution Of Burrowing Owls In East- Central South Dakota, Jiill A. Shaffer, Jason P. Thiele

The Prairie Naturalist

Western burrowing owl (Athene cunicularia hypugaea) populations have declined across much of western North America, particularly at the northern and eastern edges of the species’ breeding range (Martell et al. 2001, Murphy et al. 2001, Shyry et al. 2001, Skeel et al. 2001, Klute et al. 2003). In South Dakota, the burrowing owl is a summer resident that historically was relatively common throughout the state, but its range has decreased in recent decades, especially in the eastern half of the state (Whitney et al. 1978, South Dakota Ornithologists’ Union [SDOU] 1991, Peterson 1995). Tallman et al. (2002) described the species …

Notes: Nesting Patterns Of Red-Tailed Hawks And Great-Horned Owls In South-Cen- Tral Kansas, William Langley

The Prairie Naturalist

Red-tailed hawks (Buteo jamaicensis) and great-horned owls (Bubo virginianus) can influence the nesting behavior of each other through direct competition for nesting sites. For instance, owls begin nesting before hawks and, thus, can use nests from the previous year and prevent hawks from occupying those sites (Orians and Kuhl- man 1956, Gilmer et al. 1983, Minor et al. 1993). However, both species sometimes kill the nestlings of the other (Craig- head and Craighead 1956, Bosakowski et al. 1989).

The objective of my study was to investigate nesting patterns of these two raptors at the edge of the tallgrass prairie over …

Research Notes Vs. Research Articles, Christopher N. Jacques

The Prairie Naturalist

Greetings GPNSS members! I hope this email finds you well, winding down another academic year, and looking forward to the summer field season. Warm temperatures, peak foliage, and heightened anticipation of the start of another field season are upon us following a long winter season and unusually wet spring for many of us across the Great Plains. Here in westcentral Illinois, wild turkeys are gobbling, neotropical migrants are singing and establishing breeding territories, and white-tailed deer are within days of giving birth to the next generation of fawns. Granted, there are many outdoor activities to participate in, though oppressive heat …

Reproductive Isolation In The Elegans-Group Of Caenorhabditis, Scott Everet Baird, Sara Rose Seibert

Biological Sciences Faculty Publications

Reproductive isolation is the basis of the Biological Species Definition and can be a driving force of speciation. Theoretical studies have provided models of how reproductive isolation can arise within individual species. Genetic tests of these models are limited to populations in which reproductive isolation is present but not complete. Here, reproductive isolation in the Elgans-Group of the nematode genus Caenorhabditis is reviewed. Pre-mating barriers, assortative fertilization and post-zygotic barriers all have been observed in this clade. In some combinations of species, fertile F1 hybrids can be obtained. Therefore, the Elegans-Group of Caenorhabditis is poised to become an important experimental …

Progress Towards A Phylogeny Of World Tachinidae. Year 1, John O. Stireman Iii, James E. O'Hara, Michael C. Moulton, Pierfilippo Cerretti, Isaac S. Winkler

Biological Sciences Faculty Publications

D eveloping a structural phylogenetic framework for the family Tachinidae has been an interest of mine since I first started working on tachinids as a graduate student. It was then that I developed a new phylogenetic perspective with which to view the world, and many of the questions I wanted to ask of tachinids depended on some level of phylogenetic knowledge of them. I was surprised at the time that no one had attempted a broad quantitative phylogenetic analysis of the family, and a publication from my thesis work on the Exoristinae (Stireman 2002) became the first such study that …

To 'Die Hel' And Back. Expeditions Of The Phylogeny Of World Tachinidae Project. Part I: Western Cape, South Africa, Pierfilippo Cerretti, James E. O'Hara, John O. Stireman Iii, Isaac S. Winkler, Ashley H. Kirk-Spriggs

Biological Sciences Faculty Publications

The “Phylogeny of World Tachinidae” project kicked off with an operational meeting in June 2012 at the Canadian National Collection of Insects (CNC) in Ottawa. Goals were discussed, work plans prepared, and of course the destinations and timing of major field expeditions were debated. During our three years of National Science Foundation funding we hope to gather fresh material for molecular analysis from all biogeographic regions of the world.