Open Access. Powered by Scholars. Published by Universities.®
- Discipline
-
- Other Plant Sciences (1431)
- Agronomy and Crop Sciences (1158)
- Botany (1148)
- Agricultural Science (1133)
- Agriculture (1132)
-
- Horticulture (1099)
- Plant Pathology (622)
- Plant Breeding and Genetics (221)
- Ecology and Evolutionary Biology (45)
- Genetics and Genomics (36)
- Biodiversity (35)
- Physical Sciences and Mathematics (33)
- Terrestrial and Aquatic Ecology (27)
- Environmental Sciences (24)
- Genetics (22)
- Weed Science (20)
- Biochemistry, Biophysics, and Structural Biology (17)
- Biology (16)
- Social and Behavioral Sciences (15)
- Animal Sciences (14)
- Biochemistry (13)
- Genomics (13)
- Engineering (12)
- Entomology (11)
- Earth Sciences (10)
- Bioresource and Agricultural Engineering (9)
- Bioinformatics (7)
- Keyword
-
- Maize (60)
- Soybean (47)
- Sorghum (27)
- Corn (25)
- Rice (22)
-
- Yield (21)
- Wheat (20)
- Drought (18)
- Nitrogen (18)
- GWAS (17)
- Nebraska (17)
- Cover crops (16)
- Abiotic stress (15)
- Genomic prediction (15)
- Glycine max (13)
- Food security (12)
- Genomic selection (12)
- Taxonomy (12)
- Arabidopsis (11)
- Yield gap (11)
- Yield potential (11)
- Bioenergy (10)
- GenPred (10)
- Genomics (10)
- Grasslands (10)
- Remote sensing (10)
- Soil (10)
- Sorghum bicolor (10)
- Transcriptomics (10)
- Climate change (9)
- Publication Year
- Publication
-
- Department of Agronomy and Horticulture: Faculty Publications (996)
- Department of Plant Pathology: Faculty Publications (410)
- Center for Plant Science Innovation: Faculty Publications (199)
- Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research (134)
- School of Biological Sciences: Faculty Publications (32)
-
- Nebraska Agricultural Experiment Station: Historical Research Bulletins (13)
- Department of Biochemistry: Faculty Publications (12)
- Center for Grassland Studies: Newsletters (7)
- Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023– (7)
- Honors Program: Senior Projects (Public) (6)
- Estudios científicos en el estado de Hidalgo y zonas aledañas (5)
- School of Natural Resources: Dissertations, Theses, and Student Research (5)
- Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298 (4)
- Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research (3)
- Department of Agricultural and Biological Systems Engineering: Faculty Publications (3)
- Papers in Systematics and Biological Diversity (3)
- School of Biological Sciences: Dissertations, Theses, and Student Research (3)
- Agronomy & Horticulture -- Faculty Publications (2)
- Department of Environmental Studies: Undergraduate Student Theses (2)
- Department of Geography: Dissertations, Theses, and Student Research (2)
- Diana Pilson Publications (2)
- Doctor of Plant Health Program: Dissertations and Student Research (2)
- Harold W. Manter Laboratory of Parasitology: Faculty Publications (2)
- Kathleen H. Keeler Publications (2)
- Transactions of the Nebraska Academy of Sciences and Affiliated Societies (2)
- UCARE: Research Products (2)
- United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications (2)
- West Central Research and Extension Center, North Platte (2)
- Complex Biosystems Program: Dissertations and Student Research (1)
- Cornhusker Economics (1)
Articles 1261 - 1290 of 1879
Full-Text Articles in Plant Biology
Smut Diseases Of Corn, Tamra Jackson-Ziems
Smut Diseases Of Corn, Tamra Jackson-Ziems
Department of Plant Pathology: Faculty Publications
This NebGuide describes the two smut diseases of corn in Nebraska, common smut and head smut, including their symptoms, life cycle, and management.
Two smut diseases of corn occur in Nebraska (Figure 1). Despite their similar appearance, their disease cycles are very different, as are their yield loss potential and management strategies (Table 1).
Common Stalk Rot Diseases Of Corn, Tamra A. Jackson-Ziems, Jennifer M. Rees, Robert M. Harveson
Common Stalk Rot Diseases Of Corn, Tamra A. Jackson-Ziems, Jennifer M. Rees, Robert M. Harveson
Department of Plant Pathology: Faculty Publications
Extension Circular 1898 (EC1898)
Stalk rot diseases of corn are common, occurring in every field to some extent. Each year stalk rot diseases cause about 5 percent yield loss. Under some conditions, losses can exceed 10–20 percent, and in isolated areas losses have been as high as 100 percent. Stalk rot diseases reduce yield both directly and indirectly. Plants with prematurely rotted stalks produce lightweight, poorly filled ears because of the plant’s limited access to carbohydrates during grain fill. Infected stalks are converted from sturdy, solid rods to hollow tubes as the stalk pith pulls away from the outer rind, …
Disease Profiles: Nematodes Of Nebraska Field Crops, Tamra A. Jackson-Ziems, Loren J. Giesler, Robert M. Harveson, Kevin A. Korus, Stephen N. Wegulo
Disease Profiles: Nematodes Of Nebraska Field Crops, Tamra A. Jackson-Ziems, Loren J. Giesler, Robert M. Harveson, Kevin A. Korus, Stephen N. Wegulo
Department of Plant Pathology: Faculty Publications
Extension Circular 1908 (EC1908).
Many species of plant parasitic nematodes affect Nebraska field crops. Some of the more common and/or damaging nematodes are described here. The extent of crop injury depends on the species present, their abundance, and other crop stresses. Diagnosis of nematode injury is difficult because most plant parasitic nematodes can’t be seen with the naked eye and the type and severity of symptoms can vary widely. Most nematodes cause general symptoms that are not diagnostic and may mimic symptoms caused by other biotic or abiotic problems, such as herbicide damage, nutrient imbalances, water stress, and insect feeding. …
Plant Defense Suppression Is Mediated By A Fungal Sirtuin During Rice Infection By Magnaporthe Oryzae, Jessie Fernandez, Margarita Marroquin-Guzman, Renu Nandakumar, Sara Shijo, Kathryn M. Cornwell, Gang Li, Richard Wilson
Plant Defense Suppression Is Mediated By A Fungal Sirtuin During Rice Infection By Magnaporthe Oryzae, Jessie Fernandez, Margarita Marroquin-Guzman, Renu Nandakumar, Sara Shijo, Kathryn M. Cornwell, Gang Li, Richard Wilson
Department of Plant Pathology: Faculty Publications
Crop destruction by the hemibiotrophic rice pathogen Magnaporthe oryzae requires plant defense suppression to facilitate extensive biotrophic growth in host cells before the onset of necrosis. How this is achieved at the genetic level is not well understood. Here, we report that a M. oryzae sirtuin, MoSir2, plays an essential role in rice defense suppression and colonization by controlling superoxide dismutase (SOD) gene expression. Loss of MoSir2 function in Δsir2 strains did not affect appressorial function, but biotrophic growth in rice cells was attenuated. Compared to wild type, Δsir2 strains failed to neutralize plant-derived reactive oxygen species (ROS) …
A Global Database Of Soil Nematode Abundance And Functional Group Composition, Johan Hoogen, Peter Mullen, 72 Other Scholars
A Global Database Of Soil Nematode Abundance And Functional Group Composition, Johan Hoogen, Peter Mullen, 72 Other Scholars
Department of Plant Pathology: Faculty Publications
As the most abundant animals on earth, nematodes are a dominant component of the soil community. They play critical roles in regulating biogeochemical cycles and vegetation dynamics within and across landscapes and are an indicator of soil biological activity. Here, we present a comprehensive global dataset of soil nematode abundance and functional group composition. This dataset includes 6,825 georeferenced soil samples from all continents and biomes. For geospatial mapping purposes these samples are aggregated into 1,933 unique 1-km pixels, each of which is linked to 73 global environmental covariate data layers. Altogether, this dataset can help to gain insight into …
Mapping The Low Palmitate Fap1 Mutation And Validation Of Its Effects In Soybean Oil And Agronomic Traits In Three Soybean Populations, Andrea J. Cardinal, Rebecca Whetten, Sanbao Wang, Jérôme Auclair, D. L. Hyten, P. B. Cregan, Eleni Bachlava, Jason Gillman, Martha Ramirez, Ralph Dewey, Greg Upchurch, Lilian Miranda, Joesph W. Burton
Mapping The Low Palmitate Fap1 Mutation And Validation Of Its Effects In Soybean Oil And Agronomic Traits In Three Soybean Populations, Andrea J. Cardinal, Rebecca Whetten, Sanbao Wang, Jérôme Auclair, D. L. Hyten, P. B. Cregan, Eleni Bachlava, Jason Gillman, Martha Ramirez, Ralph Dewey, Greg Upchurch, Lilian Miranda, Joesph W. Burton
Department of Agronomy and Horticulture: Faculty Publications
Soybean oil with reduced palmitic acid content is desirable to reduce the health risks associated with consumption of this fatty acid. The objectives of this study were: to identify the genomic location of the reduced palmitate fap1 mutation, determine its molecular basis, estimate the amount of phenotypic variation in fatty acid composition explained by this locus, determine if there are epistatic interactions between the fap1 and fapnc loci and, determine if the fap1 mutation has pleiotropic effects on seed yield, oil and protein content in three soybean populations. This study detected two major QTL for 16:0 content located in …
Evaluation Of Soilless Media Sensors For Managing Winter-Time Greenhouse Strawberry Production Using A Capmat System, George E. Meyer, Ellen T. Paparozzi, Stacy A. Adams, Diego Scacalossi Voltan
Evaluation Of Soilless Media Sensors For Managing Winter-Time Greenhouse Strawberry Production Using A Capmat System, George E. Meyer, Ellen T. Paparozzi, Stacy A. Adams, Diego Scacalossi Voltan
Department of Agronomy and Horticulture: Faculty Publications
It is important for a greenhouse strawberry grower to know that their capillary mat (CapMat™) fertigation system is working correctly and that plants are receiving the correct amounts of water and fertilizer. Pots with soilless mix are not expected to hold more than 70% water on a volumetric basis. Pots with less than 40% water content continuously are not supplied enough water and nutrients to the plants. Typically, pots located near the manifold distribution system get a little more water than those at the other locations, but water use will really vary according to the factors listed above as well …
Quantitative Trait Loci (Qtl) That Underlie Scn Resistance In Soybean [Glycine Max (L.) Merr.] Pi438489b By ‘Hamilton’ Recombinant Inbred Line (Ril) Population, Kassem My Abdelmajid, Laura Ramos, D. L. Hyten, Jason Bond, Abdelhafid Bendahmane, Prakash R. Arelli, Victor N. Njiti, Silvia Cianzio, Stella K. Kantartzi, Khalid Meksem
Quantitative Trait Loci (Qtl) That Underlie Scn Resistance In Soybean [Glycine Max (L.) Merr.] Pi438489b By ‘Hamilton’ Recombinant Inbred Line (Ril) Population, Kassem My Abdelmajid, Laura Ramos, D. L. Hyten, Jason Bond, Abdelhafid Bendahmane, Prakash R. Arelli, Victor N. Njiti, Silvia Cianzio, Stella K. Kantartzi, Khalid Meksem
Department of Agronomy and Horticulture: Faculty Publications
Soybean cyst nematode caused by Heterodera glycines Ichinohe is the most devastating pest in soybean [Glycine max (L.) Merr.]. Resistance to SCN is complex, polygenic, race and cultivar specific, and it is controlled by several quantitative trait loci (QTL). Our objective was to identify and map QTL for SCN resistance to races 3 (HG Type 0) and 5 (HG Type 2.5.7) using a high density SNP-based genetic linkage map based on the PI438489B by ‘Hamilton’ (PIxH, n=50) recombinant inbred line population. The PI438489B by Hamilton map contained 648 SNPs distributed on 31 LGs with coverage of 1,524.7 cM and …
Corn Disease Update, Tamra A. Jackson-Ziems, Thomas W. Dorn
Corn Disease Update, Tamra A. Jackson-Ziems, Thomas W. Dorn
Department of Plant Pathology: Faculty Publications
The growing conditions during 2013 contributed to several disease problems in corn. Cold and wet conditions early led to development of seedling diseases. The hail-damaged corn in many areas of the state during the season led to ear rot diseases that were exacerbated by cooler conditions and increased grain moisture. Diseases have been a problem throughout the season and could extend beyond harvest into storage of some corn.
Eqtl Networks Reveal Complex Genetic Architecture In The Immature Soybean Seed, Yung-Tsi Bolon, D. Hyten, James H. Orf, Carroll P. Vance, Gary J. Muehlbauer
Eqtl Networks Reveal Complex Genetic Architecture In The Immature Soybean Seed, Yung-Tsi Bolon, D. Hyten, James H. Orf, Carroll P. Vance, Gary J. Muehlbauer
Department of Agronomy and Horticulture: Faculty Publications
The complex network of regulatory factors and interactions involved in transcriptional regulation within the seed is not well understood. To evaluate gene expression regulation in the immature seed, we utilized a genetical genomics approach on a soybean [Glycine max (L.) Merr.] recombinant inbred line (RIL) population and produced a genome-wide expression quantitative trait loci (eQTL) dataset. The validity of the dataset was confirmed by mapping the eQTL hotspot for flavonoid biosynthesis-related genes to a region containing repeats of chalcone synthase (CHS) genes known to correspond to the soybean inhibitor locus that regulates seed color. We then identified eQTL for …
Glyphosate-Resistant Giant Ragweed (Ambrosia Trifida) Control In Glufosinate-Resistant Soybean, Simranpreet Kaur, Lowell D. Sandell, John L. Lindquist, Amit J. Jhala
Glyphosate-Resistant Giant Ragweed (Ambrosia Trifida) Control In Glufosinate-Resistant Soybean, Simranpreet Kaur, Lowell D. Sandell, John L. Lindquist, Amit J. Jhala
Department of Agronomy and Horticulture: Faculty Publications
Glyphosate-resistant giant ragweed is one of the most competitive weeds of agronomic crops in the United States. Early emergence and rapid growth rate makes giant ragweed a competitive weed early in the season and reduces crop yields. Therefore, early spring control of giant ragweed using a preplant herbicide is critical. Glufosinate is an alternative POST herbicide for weed control in glufosinate-resistant soybean. Field experiments were conducted at David City, NE, in 2012 and 2013 to evaluate the efficacy of preplant herbicides followed by glufosinate applied alone or in tank mixes for control of glyphosate-resistant giant ragweed in glufosinate-resistant soybean. Preplant …
Shattercane X Als-Tolerant Sorghum F1 Hybrid And Shattercane Interference In Als-Tolerant Sorghum, Rodrigo Werle, Jared J. Schmidt, John Laborde, Angela Tran, Cody F. Creech, John L. Lindquist
Shattercane X Als-Tolerant Sorghum F1 Hybrid And Shattercane Interference In Als-Tolerant Sorghum, Rodrigo Werle, Jared J. Schmidt, John Laborde, Angela Tran, Cody F. Creech, John L. Lindquist
Department of Agronomy and Horticulture: Faculty Publications
ALS-tolerant grain sorghum cultivars are expected to be available for farmers within the next few years. Knowing that: (i) crosses between sorghum and shattercane are likely to occur resulting in crop-to-weed gene flow; (ii) ALS-susceptible shattercane X ALS-tolerant grain sorghum F1 hybrids (hybrids) were ultimately resistant to ALS-herbicides under field conditions; and (iii) hybrid fitness is equal to, or greater than, the wild parent, we conducted a greenhouse study to compare the competitive effect of shattercane and hybrid on sorghum, and whether or not herbicide application would influence the competitive ability of the hybrid …
Corn (Zea Mays) Emergence And Early Growth As Influenced By Tansymustard (Descurainia Pinnata) Residue, Rodrigo Werle, Leonardo L. Perez, Lowell D. Sandell, John L. Lindquist
Corn (Zea Mays) Emergence And Early Growth As Influenced By Tansymustard (Descurainia Pinnata) Residue, Rodrigo Werle, Leonardo L. Perez, Lowell D. Sandell, John L. Lindquist
Department of Agronomy and Horticulture: Faculty Publications
Farmers have observed reduced early growth of corn in the presence of tansymustard [Descurainia pinnata (Walt.) Britt.], a winter annual weed of the Brassicaceae family. A greenhouse study was conducted to evaluate the effect of tansymustard on corn (Zea mays L.) emergence and early growth. Treatments included corn growing in pots with only tansymustard root residue, with only tansymustard shoot residue, and with whole tansymustard plant residue (roots plus shoots); tansymustard plants treated with glyphosate 2 days after planting (DAP) corn seeds; and a control (no tansymustard residue). Corn emergence was recorded and biomass measured after 4 weeks of …
Phytophthora Root Rot Resistance In Soybean E00003, Zhongnan Zhang, Jianjun Hao, Jiazheng Yuan, Qijian Song, D. L. Hyten, P. B. Cregan, Guorong Zhang, Cuihua Gu, Ming Li, Dechun Wang
Phytophthora Root Rot Resistance In Soybean E00003, Zhongnan Zhang, Jianjun Hao, Jiazheng Yuan, Qijian Song, D. L. Hyten, P. B. Cregan, Guorong Zhang, Cuihua Gu, Ming Li, Dechun Wang
Department of Agronomy and Horticulture: Faculty Publications
Phytophthora root rot (PRR) is a devastating disease in soybean [Glycine max (L.) Merr.] production. Michigan elite soybean E00003 is resistant to Phytophthora sojae and has been used as a resistance source in breeding. Genetic control of PRR resistance in this source is unknown. To facilitate marker-assisted selection (MAS), the PRR resistance loci in E00003 and their map locations need to be determined. In this study, a genetic mapping approach was used to identify major PRR -resistant loci in E00003. The mapping population consists of 240 F4–derived lines developed by crossing E00003 with the P. sojae susceptible …
Identification And Validation Of Quantitative Trait Loci For Seed Yield, Oil And Protein Contents In Two Recombinant Inbred Line Populations Of Soybean, Xianzhi Wang, Guo‑Liang Jiang, Marci Green, Roy A. Scott, Qijian Song, D. L. Hyten, P. B. Cregan
Identification And Validation Of Quantitative Trait Loci For Seed Yield, Oil And Protein Contents In Two Recombinant Inbred Line Populations Of Soybean, Xianzhi Wang, Guo‑Liang Jiang, Marci Green, Roy A. Scott, Qijian Song, D. L. Hyten, P. B. Cregan
Department of Agronomy and Horticulture: Faculty Publications
Soybean seeds contain high levels of oil and protein, and are the important sources of vegetable oil and plant protein for human consumption and livestock feed. Increased seed yield, oil and protein contents are the main objectives of soybean breeding. The objectives of this study were to identify and validate quantitative trait loci (QTLs) associated with seed yield, oil and protein contents in two recombinant inbred line populations, and to evaluate the consistency of QTLs across different environments, studies and genetic backgrounds. Both the mapping population (SD02- 4-59 × A02-381100) and validation population (SD02- 911 × SD00-1501) were phenotyped for …
Detection And Confirmation Of Quantitative Trait Loci For Soybean Seed Isoflavones, Christopher J. Smallwood, Catherine N. Nyinyi, Dean A. Kopsell, Carl E. Sams, Dennis R. West, Pengyin Chen, Stella K. Kantartzi, P. B. Cregan, D. L. Hyten, Vincent R. Pantalone
Detection And Confirmation Of Quantitative Trait Loci For Soybean Seed Isoflavones, Christopher J. Smallwood, Catherine N. Nyinyi, Dean A. Kopsell, Carl E. Sams, Dennis R. West, Pengyin Chen, Stella K. Kantartzi, P. B. Cregan, D. L. Hyten, Vincent R. Pantalone
Department of Agronomy and Horticulture: Faculty Publications
Interest in soybean [Glycine max (L.) Merr.] isoflavones has increased in recent years owing to numerous reported health benefits. Consequently, quantitative trait loci (QTL) detection for marker-assisted breeding for isoflavones is being examined for genetic gains. This study sought to detect QTL for soybean isoflavones in a population of 274 recombinant inbred lines derived from a cross between ‘Essex’ and ‘Williams 82’ that were subdivided and tested by maturity (early, mid, and late). The field tests were conducted in three environments in 2009 (Knoxville, TN; Harrisburg, IL; and Stuttgart, AR). The population was genotyped with 480 polymorphic single nucleotide …
A Reference Genome For Common Bean And Genome-Wide Analysis Of Dual Domestications, Jeremy Schmutz, Phillip E. Mcclean, Sujan Mamidi, G. Albert Wu, Steven B. Cannon, Jane Grimwood, Jerry Jenkins, Shengqiang Shu, Qijian Song, Carolina Chavarro, Mirayda Torres-Torres, Valerie Geffroy, Samira Mafi Moghaddam, Dongying Gao, Brian Abernathy, Kerrie Barry, Matthew Blair, Mark A. Brick, Mansi Chovatia, Paul Gepts, David M. Goodstein, Michael Gonzales, Uffe Hellsten, D. L. Hyten, Gaofeng Jia, James D. Kelly, Dave Kudrna, Rian Lee, Manon M.S. Richard, Phillip N. Miklas, Juan M. Osorno, Josiane Rodrigues, Vincent Thareau, Carlos A. Urrea Florez, Mei Wang, Yeisoo Yu, Ming Zhang, Rod A. Wing, P. B. Cregan, Daniel S. Rokhsar, Scott A. Jackson
A Reference Genome For Common Bean And Genome-Wide Analysis Of Dual Domestications, Jeremy Schmutz, Phillip E. Mcclean, Sujan Mamidi, G. Albert Wu, Steven B. Cannon, Jane Grimwood, Jerry Jenkins, Shengqiang Shu, Qijian Song, Carolina Chavarro, Mirayda Torres-Torres, Valerie Geffroy, Samira Mafi Moghaddam, Dongying Gao, Brian Abernathy, Kerrie Barry, Matthew Blair, Mark A. Brick, Mansi Chovatia, Paul Gepts, David M. Goodstein, Michael Gonzales, Uffe Hellsten, D. L. Hyten, Gaofeng Jia, James D. Kelly, Dave Kudrna, Rian Lee, Manon M.S. Richard, Phillip N. Miklas, Juan M. Osorno, Josiane Rodrigues, Vincent Thareau, Carlos A. Urrea Florez, Mei Wang, Yeisoo Yu, Ming Zhang, Rod A. Wing, P. B. Cregan, Daniel S. Rokhsar, Scott A. Jackson
Department of Agronomy and Horticulture: Faculty Publications
Common bean (Phaseolus vulgaris L.) is the most important grain legume for human consumption and has a role in sustainable agriculture owing to its ability to fix atmospheric nitrogen. We assembled 473 Mb of the 587-Mb genome and genetically anchored 98% of this sequence in 11 chromosome-scale pseudomolecules. We compared the genome for the common bean against the soybean genome to find changes in soybean resulting from polyploidy. Using resequencing of 60 wild individuals and 100 landraces from the genetically differentiated Mesoamerican and Andean gene pools, we confirmed 2 independent domestications from genetic pools that diverged before human colonization. …
Identification Of New Qtls For Seed Mineral, Cysteine, And Methionine Concentrations In Soybean [Glycine Max (L.) Merr.], Raghuprakash Kastoori Ramamurthy, Joseph Jedlicka, George L. Graef, Brian M. Waters
Identification Of New Qtls For Seed Mineral, Cysteine, And Methionine Concentrations In Soybean [Glycine Max (L.) Merr.], Raghuprakash Kastoori Ramamurthy, Joseph Jedlicka, George L. Graef, Brian M. Waters
Department of Agronomy and Horticulture: Faculty Publications
Increased concentrations of important nutrients in edible parts of plants could result in biofortified foods. Soybean [Glycine max (L.) Merr.] is a major legume crop and an important source of certain nutrients, including protein and minerals, in human and animal diets. Understanding the underlying genetic basis of seed composition is crucial to improving seed nutrient composition. In this study we used three soybean recombinant inbred line mapping populations derived from the crosses Williams 82 × DSR-173, Williams 82 × NKS19-90 and Williams 82 × Vinton 81, and constructed a joint linkage map from these populations. Forty quantitative trait loci (QTLs) …
The Interaction Of Climate Change, Land Cover, And Political Representation In The Usa, Brady W. Allred, Dirac L. Twidwell, Samuel D. Fuhlendorf
The Interaction Of Climate Change, Land Cover, And Political Representation In The Usa, Brady W. Allred, Dirac L. Twidwell, Samuel D. Fuhlendorf
Department of Agronomy and Horticulture: Faculty Publications
The difficulties in tackling climate change are inherently complex and primarily centered on political and social values. This is evident in the United States where political divisions and polarizations are fundamental barriers to advancing national policies, which in turn hinder international agreements, mitigation, and adaptation. Within the United States, the vast majority of agricultural and natural resource lands are projected to incur significant climate departures and are represented by the Republican Party. The resources and economic sectors that will be directly affected by climate change are represented by national leadership that is unlikely to accept policies to prevent or adapt …
Development Of Scar Markers And Up-Pcr Cross-Hybridization Method For Specific Detection Of Four Major Subgroups Of Rhizoctonia From Infected Turfgrasses, Bimal S. Amaradasa, Dilip Lakshman, Brandon J. Horvath, Keenan Amundsen
Development Of Scar Markers And Up-Pcr Cross-Hybridization Method For Specific Detection Of Four Major Subgroups Of Rhizoctonia From Infected Turfgrasses, Bimal S. Amaradasa, Dilip Lakshman, Brandon J. Horvath, Keenan Amundsen
Department of Agronomy and Horticulture: Faculty Publications
A rapid identification assay for Waitea circinata (anamorph: Rhizoctonia spp.) varieties zeae and circinata causing patch diseases on turfgrasses was developed based on the universally primed PCR (UPPCR) products cross-blot hybridization. Tester isolates belonging to the two varieties of W. circinata were amplified with a single UP primer L21, which generated multiple DNA fragments for each variety. Probes were prepared with UP-PCR products of each tester isolate by labeling with digoxigenin. Fieldcollected W. circinata isolates and representative isolates of different R. solani anastomosis groups (AG) and AG subgroups were amplified with L21, immobilized on nylon membrane and cross hybridized with …
Porocercospora Seminalis Gen. Et Comb. Nov., The Causal Organism Of Buffalograss False Smut, Bimal S. Amaradasa, Hugo Madrid, Johannes Z. Groenewald, Pedro W. Crous, Keenan L. Amundsen
Porocercospora Seminalis Gen. Et Comb. Nov., The Causal Organism Of Buffalograss False Smut, Bimal S. Amaradasa, Hugo Madrid, Johannes Z. Groenewald, Pedro W. Crous, Keenan L. Amundsen
Department of Agronomy and Horticulture: Faculty Publications
False smut caused by Cercospora seminalis is an important disease of buffalograss (Buchloe dactyloides) affecting seed production. The pathogen prevents normal caryopsis development and causes considerable yield loss and reduced seed germination. The current taxonomic placement of the false-smut causal pathogen in the genus Cercospora is incorrect based on its morphological characteristics and DNA phylogeny. In the present study the phylogenetic position of C. seminalis is clarified based on DNA sequence analysis of three loci namely the internal transcribed spacer (ITS) region, partial nuclear ribosomal large subunit (LSU) and partial sequences of the RNA polymerase II second largest …
Drought Effects On Composition And Yield For Corn Stover, Mixed Grasses, And Miscanthus As Bioenergy Feedstocks, Rachel Emerson, Amber Hoover, Allison Ray, Jeffrey Lacey, Marnie Cortez, Courtney Payne, Douglas L. Karlen, Stuart Birrell, David Laird, Robert Kallenbach, Josh Egenolf, Matthew Sousek, Thomas Voigt
Drought Effects On Composition And Yield For Corn Stover, Mixed Grasses, And Miscanthus As Bioenergy Feedstocks, Rachel Emerson, Amber Hoover, Allison Ray, Jeffrey Lacey, Marnie Cortez, Courtney Payne, Douglas L. Karlen, Stuart Birrell, David Laird, Robert Kallenbach, Josh Egenolf, Matthew Sousek, Thomas Voigt
Department of Agronomy and Horticulture: Faculty Publications
Drought conditions in 2012 were some of the most severe in recent history. The purpose of this study is to examine the impact of drought on quality, quantity, and theoretical ethanol yield (TEY) of three bioenergy feedstocks, corn stover, mixed grasses from Conservation Reserve Program lands, and Miscanthus × giganteus. To assess drought effects on these feedstocks, samples from 2010 (minimal to no drought) and 2012 (severe drought) were compared from multiple locations in the US. In all feedstocks, drought significantly increased extractives and reduced structural sugars and lignin; subsequently, TEYs were reduced 10–15%. Biomass yields were significantly reduced …
Arabidopsis Lipins, Pdat1 Acyltransferase, And Sdp1 Triacylglycerol Lipase Synergistically Direct Fatty Acids Toward Β-Oxidation, Thereby Maintaining Membrane Lipid Homeostasis, Jilian Fan, Chengshi Yan, Rebecca Roston, John Shanklin, Changcheng Xu
Arabidopsis Lipins, Pdat1 Acyltransferase, And Sdp1 Triacylglycerol Lipase Synergistically Direct Fatty Acids Toward Β-Oxidation, Thereby Maintaining Membrane Lipid Homeostasis, Jilian Fan, Chengshi Yan, Rebecca Roston, John Shanklin, Changcheng Xu
Department of Agronomy and Horticulture: Faculty Publications
Triacylglycerol (TAG) metabolism is a key aspect of intracellular lipid homeostasis in yeast and mammals, but its role in vegetative tissues of plants remains poorly defined. We previously reported that PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE1 (PDAT1) is crucial for diverting fatty acids (FAs) from membrane lipid synthesis to TAG and thereby protecting against FA-induced cell death in leaves. Here, we show that overexpression of PDAT1 enhances the turnover of FAs in leaf lipids. Using the trigalactosyldiacylglycerol1-1 (tgd1-1) mutant, which displays substantially enhanced PDAT1- mediated TAG synthesis, we demonstrate that disruption of SUGAR-DEPENDENT1 (SDP1) TAG lipase or PEROXISOMAL TRANSPORTER1 (PXA1) severely decreases …
Identification Of Differentially Expressed Genes Between Sorghum Genotypes With Contrasting Nitrogen Stress Tolerance By Genome-Wide Transcriptional Profiling, Malleswari Gelli, Yongchao Duo, Anji Reddy Konda, Chi Zhang, David R. Holding, Ismail M. Dweikat
Identification Of Differentially Expressed Genes Between Sorghum Genotypes With Contrasting Nitrogen Stress Tolerance By Genome-Wide Transcriptional Profiling, Malleswari Gelli, Yongchao Duo, Anji Reddy Konda, Chi Zhang, David R. Holding, Ismail M. Dweikat
Department of Agronomy and Horticulture: Faculty Publications
Background: Sorghum is an important cereal crop, which requires large quantities of nitrogen fertilizer for achieving commercial yields. Identification of the genes responsible for low-N tolerance in sorghum will facilitate understanding of the molecular mechanisms of low-N tolerance, and also facilitate the genetic improvement of sorghum through marker-assisted selection or gene transformation. In this study we compared the transcriptomes of root tissues from seven sorghum genotypes having differential response to low-N stress.
Results: Illumina RNA-sequencing detected several common differentially expressed genes (DEGs) between four low-N tolerant sorghum genotypes (San Chi San, China17, KS78 and high-NUE bulk) and three …
A Genome-Wide Association Study Of Seed Protein And Oil Content In Soybean, Eun-Young Hwang, Qijian Song, Gaofeng Jia, James E. Specht, David L. Hyten, Jose Costa, Perry B. Cregan
A Genome-Wide Association Study Of Seed Protein And Oil Content In Soybean, Eun-Young Hwang, Qijian Song, Gaofeng Jia, James E. Specht, David L. Hyten, Jose Costa, Perry B. Cregan
Department of Agronomy and Horticulture: Faculty Publications
Background: Association analysis is an alternative to conventional family-based methods to detect the location of gene(s) or quantitative trait loci (QTL) and provides relatively high resolution in terms of defining the genome position of a gene or QTL. Seed protein and oil concentration are quantitative traits which are determined by the interaction among many genes with small to moderate genetic effects and their interaction with the environment. In this study, a genome-wide association study (GWAS) was performed to identify quantitative trait loci (QTL) controlling seed protein and oil concentration in 298 soybean germplasm accessions exhibiting a wide range of …
Switchgrass (Panicum Virgatum L) Flag Leaf Transcriptomes Reveal Molecular Signatures Of Leaf Development, Senescence, And Mineral Dynamics, Nathan A. Palmer, Teresa Donze-Reiner, David Horvath, Tiffany Heng-Moss, Brian M. Waters, Christian M. Tobias, Gautam Sarath
Switchgrass (Panicum Virgatum L) Flag Leaf Transcriptomes Reveal Molecular Signatures Of Leaf Development, Senescence, And Mineral Dynamics, Nathan A. Palmer, Teresa Donze-Reiner, David Horvath, Tiffany Heng-Moss, Brian M. Waters, Christian M. Tobias, Gautam Sarath
Department of Agronomy and Horticulture: Faculty Publications
Switchgrass flag leaves can be expected to be a source of carbon to the plant, and its senescence is likely to impact the remobilization of nutrients from the shoots to the rhizomes. However, many genes have not been assigned a function in specific stages of leaf development. Here, we characterized gene expression in flag leaves over their development. By merging changes in leaf chlorophyll and the expression of genes for chlorophyll biosynthesis and degradation, a four-phase molecular roadmap for switchgrass flag leaf ontogeny was developed. Genes associated with early leaf development were up-regulated in phase 1. Phase 2 leaves had …
Comparison Of Winter Strawberry Production In A Commercial Heated High Tunnel Versus A University Greenhouse, Ellen T. Paparozzi, Ryan Pekarek, George E. Meyer, Stacy A. Adams, M. Elizabeth Conley, David P. Lambe, Paul Read, Erin E. Blankenship
Comparison Of Winter Strawberry Production In A Commercial Heated High Tunnel Versus A University Greenhouse, Ellen T. Paparozzi, Ryan Pekarek, George E. Meyer, Stacy A. Adams, M. Elizabeth Conley, David P. Lambe, Paul Read, Erin E. Blankenship
Department of Agronomy and Horticulture: Faculty Publications
For the past 4 years, the University of Nebraska strawberry team has worked to develop low cost, sustainable methods for farmers and growers to produce strawberries in a double polyethylene greenhouse during the winter. This past year, this growing system was adapted to become a commercial grower’s heated high tunnel for the winter/spring of 2013-14. The idea was to scale up to a farm-size demonstration and compare it to the university greenhouse production system with a goal to expand marketing opportunities for strawberries into the winter season.
Fate Of C And N From Dung Pats Into Soil, Kenneth Evans, Ana Wingeyer, Martha Mamo, Pamela Sutton, Jeff Bradshaw, Kent M. Eskridge, Matt Judkins, Jenna Beckmann, Erin Hatch
Fate Of C And N From Dung Pats Into Soil, Kenneth Evans, Ana Wingeyer, Martha Mamo, Pamela Sutton, Jeff Bradshaw, Kent M. Eskridge, Matt Judkins, Jenna Beckmann, Erin Hatch
Department of Agronomy and Horticulture: Faculty Publications
No abstract provided.
Greenhouse Gas Emissions From Soil Treated With Dung Pats, Kenneth Evans, Ana Wingeyer, Martha Mamo, Walter H. Schacht, Pamela Sutton, Kent M. Eskridge
Greenhouse Gas Emissions From Soil Treated With Dung Pats, Kenneth Evans, Ana Wingeyer, Martha Mamo, Walter H. Schacht, Pamela Sutton, Kent M. Eskridge
Department of Agronomy and Horticulture: Faculty Publications
No abstract provided.
How Do Various Maize Crop Models Vary In Their Responses To Climate Change Factors?, Simon Bassu, Nadine Brisson, Jean-Louis Durand, Kenneth J. Boote, Jon Lizaso, James Jones, Cynthia Rosenzweig, Alex Ruane, Myriam Adam, Christian Baron, Bruno Basso, Christian Biernath, Hendrick Boogaard, Sjaak Conijn, Marc Corbeels, Delphine Deryng, Giacomo De Sanctis, Sebastian Gayler, Patricio Grassini, Jerry Hatfield, Steven Hoek, Cesar Izaurralde, Raymond Jongschaap, Armen Kemanian, Christian Kersebaum, Soo-Hyung Kim, Naresh Kumar, David Makowski, Christoph Muller, Claas Nendel, Eckart Priesack, Maria Virinia Pravia, Federico Sau, Iurii Shcherbak, Fulu Tao, Edmar Teixeira, Dennis Timlin, Katharina Waha
How Do Various Maize Crop Models Vary In Their Responses To Climate Change Factors?, Simon Bassu, Nadine Brisson, Jean-Louis Durand, Kenneth J. Boote, Jon Lizaso, James Jones, Cynthia Rosenzweig, Alex Ruane, Myriam Adam, Christian Baron, Bruno Basso, Christian Biernath, Hendrick Boogaard, Sjaak Conijn, Marc Corbeels, Delphine Deryng, Giacomo De Sanctis, Sebastian Gayler, Patricio Grassini, Jerry Hatfield, Steven Hoek, Cesar Izaurralde, Raymond Jongschaap, Armen Kemanian, Christian Kersebaum, Soo-Hyung Kim, Naresh Kumar, David Makowski, Christoph Muller, Claas Nendel, Eckart Priesack, Maria Virinia Pravia, Federico Sau, Iurii Shcherbak, Fulu Tao, Edmar Teixeira, Dennis Timlin, Katharina Waha
Department of Agronomy and Horticulture: Faculty Publications
Potential consequences of climate change on crop production can be studied using mechanistic crop simulation models. While a broad variety of maize simulation models exist, it is not known whether different models diverge on grain yield responses to changes in climatic factors, or whether they agree in their general trends related to phenology, growth, and yield. With the goal of analyzing the sensitivity of simulated yields to changes in temperature and atmospheric carbon dioxide concentrations [CO2], we present the largest maize crop model intercomparison to date, including 23 different models. These models were evaluated for four locations representing a wide …