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Articles 421 - 450 of 1579

Full-Text Articles in Plant Biology

Improving On Modis Mcd64a1 Burned Area Estimates In Grassland Systems: A Case Study In Kansas Flint Hills Tall Grass Prairie, Rheinhardt Scholtz, Jayson Prentice, Yao Tang, Dirac Twidwell Jan 2020

Improving On Modis Mcd64a1 Burned Area Estimates In Grassland Systems: A Case Study In Kansas Flint Hills Tall Grass Prairie, Rheinhardt Scholtz, Jayson Prentice, Yao Tang, Dirac Twidwell

Department of Agronomy and Horticulture: Faculty Publications

Uncertainty in satellite-derived burned area estimates are especially high in grassland systems, which are some of the most frequently burned ecosystems in the world. In this study, we compare differences in predicted burned area estimates for a region with the highest fire activity in North America, the Flint Hills of Kansas, USA, using the moderate resolution imaging spectroradiometer (MODIS) MCD64A1 burned area product and a customization of the MODIS MCD64A1 product using a major ground-truthing effort by the Kansas Department of Health and Environment (KDHE-MODIS customization). Local-scale ground-truthing and the KDHE-MODIS product suggests MODIS burned area estimates under predicted fire …


A Comparison Of Media To Determine Optimal Growth In Aquaponics, Rachel L. Fogle, Andrea Nagy, Allison Bernard, Jordan Brown, Samantha Delvalle-Trinh, James Shuler Jan 2020

A Comparison Of Media To Determine Optimal Growth In Aquaponics, Rachel L. Fogle, Andrea Nagy, Allison Bernard, Jordan Brown, Samantha Delvalle-Trinh, James Shuler

Harrisburg University Presidential Research Grants

No abstract provided.


A Global Database Of Soil Nematode Abundance And Functional Group Composition, Johan Van Den Hoogen, Stefan Geisen, Thomas W. Crowther, Peter Mullin, Many Co-Authors Jan 2020

A Global Database Of Soil Nematode Abundance And Functional Group Composition, Johan Van Den Hoogen, Stefan Geisen, Thomas W. Crowther, Peter Mullin, Many Co-Authors

Department of Plant Pathology: Faculty Publications

As the most abundant animals on earth, nematodes are a dominant component of the soil community. They play critical roles in regulating biogeochemical cycles and vegetation dynamics within and across landscapes and are an indicator of soil biological activity. Here, we present a comprehensive global dataset of soil nematode abundance and functional group composition. This dataset includes 6,825 georeferenced soil samples from all continents and biomes. For geospatial mapping purposes these samples are aggregated into 1,933 unique 1-km pixels, each of which is linked to 73 global environmental covariate data layers. Altogether, this dataset can help to gain insight into …


Evaluating The Impact Of Grafting On Local Tomato Production In Nebraska, Raihanah Hassim, Samuel E. Wortman, Ashley A. Thompson, Stacy A. Adams Jan 2020

Evaluating The Impact Of Grafting On Local Tomato Production In Nebraska, Raihanah Hassim, Samuel E. Wortman, Ashley A. Thompson, Stacy A. Adams

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Grafting has been successfully used in vegetable production for tomatoes, peppers, eggplants, cucumbers, and watermelon. Besides its usefulness for managing soil-borne diseases, grafting can improve nutrient uptake and yield. However, few studies have assessed the effects of grafting and soil fertility management on yield of open field-grown tomatoes in the Midwest. Therefore, the objective of this two-year research was to better document the effects of grafting heirloom and hybrid tomato cultivar onto hybrid tomato rootstocks on tomato yield and quality. The field experiments were located at the University of Nebraska Lincoln - East Campus in Lincoln, West Central Research and …


Hysplit As An Environmental Impact Assessment Tool To Study The Data Discrepancies Between Olea Europaea Airborne Pollen Records And Its Phenology In Sw Spain, Alejandro Monroy-Colín, J. M. Maya-Manzano, Rafael Tormo-Molina, Raúl Pecero-Casimiro, María Ángeles Gonzalo-Garijo, Santiago Fernández-Rodríguez Jan 2020

Hysplit As An Environmental Impact Assessment Tool To Study The Data Discrepancies Between Olea Europaea Airborne Pollen Records And Its Phenology In Sw Spain, Alejandro Monroy-Colín, J. M. Maya-Manzano, Rafael Tormo-Molina, Raúl Pecero-Casimiro, María Ángeles Gonzalo-Garijo, Santiago Fernández-Rodríguez

Articles

The olive tree (Olea europaea) is a native evergreen tree in the Mediterranean region, being one of the most important causes of seasonal respiratory allergies in Mediterranean countries. This work aims to relate flowering phenology, source tree distribution, meteorology, and airborne pollen records for this species and to analyse the possible arrival of air masses from distant areas during days when differences between the phenological and pollen peaks. Aerobiological sampling was carried out in Badajoz (SW Spain) for 4 years (2016–2019) using a Hirst volumetric sampler. Trees were geolocalized in the city and surrounding areas. The pollination phenology of 15 …


Growth And Development, From: Forages: The Science Of Grassland Agriculture, Volume Ii, Robert B. Mitchell, Daren Redfearn, Kenneth J. Moore Jan 2020

Growth And Development, From: Forages: The Science Of Grassland Agriculture, Volume Ii, Robert B. Mitchell, Daren Redfearn, Kenneth J. Moore

Department of Agronomy and Horticulture: Faculty Publications

The growth and development of forage plants is an amazing process. In some annual grasses such as cereal rye, plants can go from the late vegetative stage to fully-flowered in less than two weeks. Conversely, some perennial grasses like indiangrass can go from the vegetative stage to the elongation stage, then enter a quiescent phase for several weeks until adequate moisture is available which then moves plants into the flowering stages to complete the seed production process. Understanding the developmental morphology of forage plants is important for making good management decisions. Many such decisions involve timing the initiation or termination …


Principles, Applications, And Biosafety Of Plant Genome Editing Using Crispr-Cas9, Kaoutar El-Mounadi, María Luisa Morales-Floriano, Hernan Garcia-Ruiz Jan 2020

Principles, Applications, And Biosafety Of Plant Genome Editing Using Crispr-Cas9, Kaoutar El-Mounadi, María Luisa Morales-Floriano, Hernan Garcia-Ruiz

Department of Plant Pathology: Faculty Publications

The terms genome engineering, genome editing, and gene editing, refer to modifications (insertions, deletions, substitutions) in the genome of a living organism. The most widely used approach to genome editing nowadays is based on Clustered Regularly Interspaced Short Palindromic Repeats and associated protein 9 (CRISPR-Cas9). In prokaryotes, CRISPR-Cas9 is an adaptive immune system that naturally protects cells from DNA virus infections. CRISPR-Cas9 has been modified to create a versatile genome editing technology that has a wide diversity of applications in medicine, agriculture, and basic studies of gene functions. CRISPR-Cas9 has been used in a growing number of monocot and dicot …


Variation Profile Of The Orthotospovirus Genome, Deepti Nigam, Hernan Garcia Ruiz Jan 2020

Variation Profile Of The Orthotospovirus Genome, Deepti Nigam, Hernan Garcia Ruiz

Department of Plant Pathology: Faculty Publications

Orthotospoviruses are plant-infecting members of the family Tospoviridae (order Bunyavirales), have a broad host range and are vectored by polyphagous thrips in a circulative- propagative manner. Because diverse hosts and vectors impose heterogeneous selection constraints on viral genomes, the evolutionary arms races between hosts and their pathogens might be manifested as selection for rapid changes in key genes. These observations suggest that orthotospoviruses contain key genetic components that rapidly mutate to mediate host adaptation and vector transmission. Using complete genome sequences, we profiled genomic variation in orthotospoviruses. Results show that the three genomic segments contain hypervariable areas at homologous locations …


Allelic Variation In Rice Fertilization Independent Endosperm 1 Contributes To Grain Width Under High Night Temperature Stress, Balpreet K. Dhatt, Puneet Paul, Jaspreet Sandhu, Waseem Hussain, Larissa Irvin, Feiyu Zhu, Maria Arlene Adviento-Borbe, Argelia Lorence, Paul Staswick, Hongfeng Yu, Gota Morota, Harkamal Walia Jan 2020

Allelic Variation In Rice Fertilization Independent Endosperm 1 Contributes To Grain Width Under High Night Temperature Stress, Balpreet K. Dhatt, Puneet Paul, Jaspreet Sandhu, Waseem Hussain, Larissa Irvin, Feiyu Zhu, Maria Arlene Adviento-Borbe, Argelia Lorence, Paul Staswick, Hongfeng Yu, Gota Morota, Harkamal Walia

Department of Agronomy and Horticulture: Faculty Publications

A higher minimum (night-time) temperature is considered a greater limiting factor for reduced rice yield than a similar increase in maximum (daytime) temperature. While the physiological impact of high night temperature (HNT) has been studied, the genetic and molecular basis of HNT stress response remains unexplored.

We examined the phenotypic variation for mature grain size (length and width) in a diverse set of rice accessions under HNT stress. Genome-wide association analysis identified several HNT-specific loci regulating grain size as well as loci that are common for optimal and HNT stress conditions.

A novel locus contributing to grain width under HNT …


Voxel Carving-Based 3d Reconstruction Of Sorghum Identifies Genetic Determinants Of Light Interception Efficiency, Mathieu Gaillard, Chenyong Miao, James Schnable, Bedrich Benes Jan 2020

Voxel Carving-Based 3d Reconstruction Of Sorghum Identifies Genetic Determinants Of Light Interception Efficiency, Mathieu Gaillard, Chenyong Miao, James Schnable, Bedrich Benes

Department of Agronomy and Horticulture: Faculty Publications

Changes in canopy architecture traits have been shown to contribute to yield increases. Optimizing both light interception and light interception efficiency of agricultural crop canopies will be essential to meeting the growing food needs. Canopy architecture is inherently three-dimensional (3D), but many approaches to measuring canopy architecture component traits treat the canopy as a two-dimensional (2D) structure to make large scale measurement, selective breeding, and gene identification logistically feasible. We develop a high throughput voxel carving strategy to reconstruct 3D representations of sorghum from a small number of RGB photos. Our approach builds on the voxel carving algorithm to allow …


Genome-Wide Identification And Analysis Of Heterotic Loci In Three Maize Hybrids, Hongjun Liu, Qin Wang, Mengjiao Chen, Yahui Ding, Xuerong Yang, Jie Liu, Xiaohan Li, Congcong Zhou, Qilin Tian, Yiqi Lu, Danlin Fan, Junpeng Shi, Lin Zhang, Congbin Kang, Mingfei Mingfei Sun, Fangyuan Li, Yujian Wu, Yongzhong Zhang, Baoshen Liu, Xiang Yu Zhao, Qi Feng, Jinliang Yang, Bin Han, Jinsheng Lai, Xian Sheng Zhang, Xuehui Huang Jan 2020

Genome-Wide Identification And Analysis Of Heterotic Loci In Three Maize Hybrids, Hongjun Liu, Qin Wang, Mengjiao Chen, Yahui Ding, Xuerong Yang, Jie Liu, Xiaohan Li, Congcong Zhou, Qilin Tian, Yiqi Lu, Danlin Fan, Junpeng Shi, Lin Zhang, Congbin Kang, Mingfei Mingfei Sun, Fangyuan Li, Yujian Wu, Yongzhong Zhang, Baoshen Liu, Xiang Yu Zhao, Qi Feng, Jinliang Yang, Bin Han, Jinsheng Lai, Xian Sheng Zhang, Xuehui Huang

Department of Agronomy and Horticulture: Faculty Publications

Heterosis, or hybrid vigour, is a predominant phenomenon in plant genetics, serving as the basis of crop hybrid breeding, but the causative loci and genes underlying heterosis remain unclear in many crops. Here, we present a large-scale genetic analysis using 5360 offsprings from three elite maize hybrids, which identifies 628 loci underlying 19 yield-related traits with relatively high mapping resolutions. Heterotic pattern investigations of the 628 loci show that numerous loci, mostly with complete–incomplete dominance (the major one) or overdominance effects (the secondary one) for heterozygous genotypes and nearly equal proportion of advantageous alleles from both parental lines, are the …


Mutations In Virus-Derived Small Rnas, Deepti Nigam, Katherine Latourrette, Hernan Garcia Ruiz Jan 2020

Mutations In Virus-Derived Small Rnas, Deepti Nigam, Katherine Latourrette, Hernan Garcia Ruiz

Department of Plant Pathology: Faculty Publications

RNA viruses exist as populations of genome variants. Virus-infected plants accumulate 21–24 nucleotide small interfering RnAs (siRnAs) derived from viral RnA (virus-derived siRnAs) through gene silencing. This paper describes the profile of mutations in virus-derived siRNAs for three members of the family Potyviridae: Turnip mosaic virus (tuMV), Papaya ringspot virus (pRSV) and Wheat streak mosaic virus (WSMV). for tuMV in Arabidopsis thaliana, profiles were obtained for mechanically inoculated rosette leaves and systemically infected cauline leaves and inflorescence. Results are consistent withselection pressure on the viral genome imposed by local and systemic movement. By genetically removing gene silencing in the plant …


A Justification For Continued Management Of Turfgrass During Economic Contraction, James T. Brosnan, Ambika Chandra, Roch E. Gaussoin, Alec Kowalewski, Bernd Leinauer, Frank S. Rossi, Douglas J. Soldat, John C. Stier, J. Bryan Unruh Jan 2020

A Justification For Continued Management Of Turfgrass During Economic Contraction, James T. Brosnan, Ambika Chandra, Roch E. Gaussoin, Alec Kowalewski, Bernd Leinauer, Frank S. Rossi, Douglas J. Soldat, John C. Stier, J. Bryan Unruh

Department of Agronomy and Horticulture: Faculty Publications

A novel coronavirus, termed COVID-19, spread worldwide and become a global pandemic in 2020. Forecasts show that COVID-19 will cause substantial economic contraction affecting almost every industry. Managed turfgrass, particularly in urban settings, has many positive societal and environmental benefits. In a contracted economy, will resources be available to manage turfgrass to achieve these benefits? In this paper, we outline the benefits of managed turfgrass on golf courses, playing fields, recreational parks, and urban landscapes to assist decision makers with resource allocation in the COVID-19 era.


Soil Sample Timing, Nitrogen Fertilization, And Incubation Length Influence Anaerobic Potentially Mineralizable Nitrogen, Jason Clark, Kristen S. Veum, Fabián G. Fernández, Newell R. Kitchen, James J. Camberato, Paul Carter, Richard Ferguson, David W. Franzen, Daniel E. Kaiser, Carrie A. M. Laboski, Emerson Nafziger, Carl J. Rosen, John E. Sawyer, John F. Shanahan Jan 2020

Soil Sample Timing, Nitrogen Fertilization, And Incubation Length Influence Anaerobic Potentially Mineralizable Nitrogen, Jason Clark, Kristen S. Veum, Fabián G. Fernández, Newell R. Kitchen, James J. Camberato, Paul Carter, Richard Ferguson, David W. Franzen, Daniel E. Kaiser, Carrie A. M. Laboski, Emerson Nafziger, Carl J. Rosen, John E. Sawyer, John F. Shanahan

Department of Agronomy and Horticulture: Faculty Publications

Understanding the variables that affect the anaerobic potentially mineralizable N (PMNan) test should lead to a standard procedure of sample collection and incubation length, improving PMNan as a tool in corn (Zea mays L.) N management. We evaluated the effect of soil sample timing (preplant and V5 corn development stage [V5]), N fertilization (0 and 180 kg ha−1) and incubation length (7, 14, and 28 d) on PMNan (0–30 cm) across a range of soil properties and weather conditions. Soil sample timing, N fertilization, and incubation length affected PMNan differently based on soil and weather conditions. Preplant vs. V5 PMNan …


Cover Crops And Weed Suppression In The U.S. Midwest: A Meta-Analysis And Modeling Study, Virginia Nicholas, Rafael Martinez-Feria, David Weisberger, Sarah Carlson, B. Basso, Andrea Basche Jan 2020

Cover Crops And Weed Suppression In The U.S. Midwest: A Meta-Analysis And Modeling Study, Virginia Nicholas, Rafael Martinez-Feria, David Weisberger, Sarah Carlson, B. Basso, Andrea Basche

Department of Agronomy and Horticulture: Faculty Publications

In addition to soil health and conservation benefits, cover crops (CCs) may offer weed control in the midwestern United States, but individual studies report vary- ing effects. We conducted a meta-analysis of studies measuring weed biomass (WBIO) or density (WDEN) in paired CC and no-cover treatments in corn (Zea mays L.)–soybean [Glycine max (L.) Merr] rotations in the U.S. Midwest. Fifteen studies provided 123 paired comparisons of WBIO and 119 of WDEN. Only grass CCs significantly reduced WBIO, while no CC reduced WDEN. We found no evidence CC management factors (e.g., termination method) directly affected out- comes. Our dataset showed …


Quantifying On‐Farm Nitrous Oxide Emission Reductions In Food Supply Chains, A.J. Eagle, E. Mclellan, E.M. Brawner, M.H. Chantigny, Eric A. Davidson, J.B. Dickey, Bruce A. Linquist, T.M. Maaz, D.E. Pelster, Cameron M. Pittelkow, C. Van Kessel, T.J. Vyn, K. G. Cassman Jan 2020

Quantifying On‐Farm Nitrous Oxide Emission Reductions In Food Supply Chains, A.J. Eagle, E. Mclellan, E.M. Brawner, M.H. Chantigny, Eric A. Davidson, J.B. Dickey, Bruce A. Linquist, T.M. Maaz, D.E. Pelster, Cameron M. Pittelkow, C. Van Kessel, T.J. Vyn, K. G. Cassman

Department of Agronomy and Horticulture: Faculty Publications

Reducing nitrous oxide (N2O) emissions from agriculture is critical to limiting future global warming. In response, a growing number of food retailers and manufacturers have committed to reducing N2O emissions from their vast networks of farmer suppliers by providing technical assistance and financial incentives. A key challenge for such companies is demonstrating that their efforts are leading to meaningful progress toward their climate mitigation commitments. We show that a simplified version of soil surface nitrogen (N) balance—or partial N balance—the difference between N inputs to and outputs

from a farm field (fertilizer N minus crop N), is a robust indicator …


Woody Plant Encroachment And The Sustainability Of Priority Conservation Areas, Dillon Fogarty, Caleb P. Roberts, Daniel R. Uden, Victoria M. Donovan, Craig R. Allen, David E. Naugle, Matthew O. Jones, Brady W. Allred, Dirac L. Twidwell Jr Jan 2020

Woody Plant Encroachment And The Sustainability Of Priority Conservation Areas, Dillon Fogarty, Caleb P. Roberts, Daniel R. Uden, Victoria M. Donovan, Craig R. Allen, David E. Naugle, Matthew O. Jones, Brady W. Allred, Dirac L. Twidwell Jr

Department of Agronomy and Horticulture: Faculty Publications

Woody encroachment is a global driver of grassland loss and management to counteract encroachment represents one of the most expensive conservation practices implemented in grasslands. Yet, outcomes of these practices are often unknown at large scales and this constrains practitioner’s ability to advance conservation. Here, we use new monitoring data to evaluate outcomes of grassland conservation on woody encroachment for Nebraska’s State Wildlife Action Plan, a statewide effort that targets management in Biologically Unique Landscapes (BULs) to conserve the state’s natural communities. We tracked woody cover trajectories for BULs and compared BUL trajectories with those in non-priority landscapes (non-BULs) to …


Strategic Switchgrass (Panicum Virgatum) Production Within Row Cropping Systems: Regional-Scale Assessment Of Soil Erosion Loss And Water Runoff Impacts, Enheng Wang, R. M. Cruse, Bharat Sharma-Acharya, Daryl E. Herzmann, Brian K. Gelder, David E. James, Dennis C. Flanagan, Humberto Blanco-Canqui, Robert B. Mitchell, David Laird Jan 2020

Strategic Switchgrass (Panicum Virgatum) Production Within Row Cropping Systems: Regional-Scale Assessment Of Soil Erosion Loss And Water Runoff Impacts, Enheng Wang, R. M. Cruse, Bharat Sharma-Acharya, Daryl E. Herzmann, Brian K. Gelder, David E. James, Dennis C. Flanagan, Humberto Blanco-Canqui, Robert B. Mitchell, David Laird

Department of Agronomy and Horticulture: Faculty Publications

A strong need exists for tools to assess the efficacy of conservation practices across large regions supporting informed policy decisions that may lead to better soil and water conservation while optimizing agricultural production options. Perennial warm-season grasses (WSGs) such as switchgrass (Panicum virgatum), can be grown on marginally productive and/or environmentally sensitive lands to meet growing bioenergy demands while reducing water runoff and soil erosion compared to current row crop systems. Quantifying the soil and water conservation effects of WSG when strategically placed on the landscape would help support decisions favoring both economic and environmental benefits. We used the Daily …


Soil Aggregation As Affected By Application Of Diverse Organic Materials, Maman Garba, Charles S. Wortmann, Humberto Blanco-Canqui Jan 2020

Soil Aggregation As Affected By Application Of Diverse Organic Materials, Maman Garba, Charles S. Wortmann, Humberto Blanco-Canqui

Department of Agronomy and Horticulture: Faculty Publications

Application of organic materials can amend soil for improved water infiltration and reduced erodibility with effects varying with soil properties and the organic amendment type and rate. The effects of four livestock manures, three municipal biosolids, and one industrial by-product on dry and wet soil aggregate stability were evaluated at six sites in Nebraska. The amendments had similar C/N ratios but the biosolids had relatively high concentrations of lignin and cellulose. Soil organic matter (SOM) ranged from 21 to 65 g kg−1 and soils were silty clay loam, silt loam, or loamy sand. Soil was sampled for the 0- to …


Benchmarking The Agronomic Performance Of Biodegradable Mulches Against Polyethylene Mulch Film: A Meta‐Analysis, Mauro B.D. Tofanelli, Samuel E. Wortman Jan 2020

Benchmarking The Agronomic Performance Of Biodegradable Mulches Against Polyethylene Mulch Film: A Meta‐Analysis, Mauro B.D. Tofanelli, Samuel E. Wortman

Department of Agronomy and Horticulture: Faculty Publications

Growers are interested in biodegradable alternatives to petroleum‐based polyethylene mulch film (PEM). However, many growers cite limited knowledge about biodegradable mulch films (BDMs) as a significant barrier to adoption. Agronomic field tests of BDMs are often limited temporally or spatially, and the variability of performance results relative to PEM may be contributing to this perceived knowledge gap. Our objective was to use data available in the scientific literature to provide the first quantitative performance benchmark of BDMs against PEM. We extracted data from 66 articles for meta‐analysis. Response ratios were calculated for comparison of BDMs relative to black PEM, and …


Wheat Growth Monitoring And Yield Estimation Based On Multi-Rotor Unmanned Aerial Vehicle, Zhaopeng Fu, Jie Jang, Yang Gao, Brian Krienke, Meng Wang, Kaitai Zhong, Qiang Cao, Yongchao Tian, Yan Zhu, Weixing Cao, Xiaojun Liu Jan 2020

Wheat Growth Monitoring And Yield Estimation Based On Multi-Rotor Unmanned Aerial Vehicle, Zhaopeng Fu, Jie Jang, Yang Gao, Brian Krienke, Meng Wang, Kaitai Zhong, Qiang Cao, Yongchao Tian, Yan Zhu, Weixing Cao, Xiaojun Liu

Department of Agronomy and Horticulture: Faculty Publications

Leaf area index (LAI) and leaf dry matter (LDM) are important indices of crop growth. Real-time, nondestructive monitoring of crop growth is instructive for the diagnosis of crop growth and prediction of grain yield. Unmanned aerial vehicle (UAV)-based remote sensing is widely used in precision agriculture due to its unique advantages in flexibility and resolution. This study was carried out on wheat trials treated with different nitrogen levels and seeding densities in three regions of Jiangsu Province in 2018–2019. Canopy spectral images were collected by the UAV equipped with a multi-spectral camera during key wheat growth stages. To verify the …


Gwas: Fast-Forwarding Gene Identification And Characterization In Temperate Cereals: Lessons From Barley – A Review, Ahmad M. Alqudah, Ahmed Sallam, P. Stephen Baenziger, Andreas Börner Jan 2020

Gwas: Fast-Forwarding Gene Identification And Characterization In Temperate Cereals: Lessons From Barley – A Review, Ahmad M. Alqudah, Ahmed Sallam, P. Stephen Baenziger, Andreas Börner

Department of Agronomy and Horticulture: Faculty Publications

Understanding the genetic complexity of traits is an important objective of small grain temperate cereals yield and adaptation improvements. Bi-parental quantitative trait loci (QTL) linkage mapping is a pow- erful method to identify genetic regions that co-segregate in the trait of interest within the research pop- ulation. However, recently, association or linkage disequilibrium (LD) mapping using a genome-wide association study (GWAS) became an approach for unraveling the molecular genetic basis underlying the natural phenotypic variation. Many causative allele(s)/loci have been identified using the power of this approach which had not been detected in QTL mapping populations. In barley (Hordeum …


The State Of Sustainable Agriculture And Agroecology Research And Impacts: A Survey Of U.S. Scientists, Marcia Delonge, Tali Robbins, Andrea D. Basche, Lindsey Haynes-Maslow Jan 2020

The State Of Sustainable Agriculture And Agroecology Research And Impacts: A Survey Of U.S. Scientists, Marcia Delonge, Tali Robbins, Andrea D. Basche, Lindsey Haynes-Maslow

Department of Agronomy and Horticulture: Faculty Publications

A growing body of research suggests that although sustainable agriculture, particularly agroecology, can address challenges such as those related to climate change, ecosystem services, food insecurity, and farmer livelihoods, the transition to such systems remains limited. To gain insight into the state of U.S. sustainable agriculture and agroecology, we developed a 28-question mixed-method survey that was administered to scientists in these fields. Respondents (N=168) represented diverse locations, institutions, and career stages. They offered varied definitions of sustainable agriculture, with 40% considering economic and social well-being to be core components. Respondents identified the amount and duration of public research …


Dicamba Retention In Commercial Sprayers Following Triple Rinse Cleanout Procedures, And Soybean Response To Contamination Concentrations, Frances B. Browne, Xiao Li, Katilyn J. Price, Jianping Wang, Yi Wang, Greg R. Kruger, Jeff Golus, Gabrielle De Castro Macedo, Bruno C. Vieira, Tyler Sandlin Jan 2020

Dicamba Retention In Commercial Sprayers Following Triple Rinse Cleanout Procedures, And Soybean Response To Contamination Concentrations, Frances B. Browne, Xiao Li, Katilyn J. Price, Jianping Wang, Yi Wang, Greg R. Kruger, Jeff Golus, Gabrielle De Castro Macedo, Bruno C. Vieira, Tyler Sandlin

Department of Agronomy and Horticulture: Faculty Publications

The commercial launch of dicamba‐tolerant (DT) crops has resulted in increased dicamba usage and a high number of dicamba off‐target movement complaints on sensitive soybeans (Glycine max L.). Dicamba is a synthetic auxin and low dosages as 0.028 g ae ha−1 can induce injury on sensitive soybean. Tank contamination has been identified as one of the sources for unintended sensitive crop exposure. The labels of new dicamba formulations require a triple rinse cleanout procedure following applications. Cleanout efficacy might vary based on the sprayer type and procedure followed. This study was performed to quantify dicamba retention in commercial sprayers and …


Prediction Strategies For Leveraging Information Of Associated Traits Under Single- And Multi-Trait Approaches In Soybeans, Reyna Persa, Arthur Bernardeli, Diego Jarquin Jan 2020

Prediction Strategies For Leveraging Information Of Associated Traits Under Single- And Multi-Trait Approaches In Soybeans, Reyna Persa, Arthur Bernardeli, Diego Jarquin

Department of Agronomy and Horticulture: Faculty Publications

The availability of molecular markers has revolutionized conventional ways to improve genotypes in plant and animal breeding through genome-based predictions. Several models and methods have been developed to leverage the genomic information in the prediction context to allow more efficient ways to screen and select superior genotypes. In plant breeding, usually, grain yield (yield) is the main trait to drive the selection of superior genotypes; however, in many cases, the information of associated traits is also routinely collected and it can potentially be used to enhance the selection. In this research, we considered different prediction strategies to leverage the information …


Rhizosphere Microbiome Of Arid Land Medicinal Plants And Extra Cellular Enzymes Contribute To Their Abundance, Abdul Latif Khan, Sajjad Asaf, Raeid M. M. Abed, Yen Ning Chai, Ahmed N. Al-Rawahi, Tupan Kumar Mohanta, Ahmed Al-Rawahi, Daniel P. Schachtman, Ahmed Al-Harrasi Jan 2020

Rhizosphere Microbiome Of Arid Land Medicinal Plants And Extra Cellular Enzymes Contribute To Their Abundance, Abdul Latif Khan, Sajjad Asaf, Raeid M. M. Abed, Yen Ning Chai, Ahmed N. Al-Rawahi, Tupan Kumar Mohanta, Ahmed Al-Rawahi, Daniel P. Schachtman, Ahmed Al-Harrasi

Department of Agronomy and Horticulture: Faculty Publications

Revealing the unexplored rhizosphere microbiome of plants in arid environments can help in understanding their interactions between microbial communities and plants during harsh growth conditions. Here, we report the first investigation of rhizospheric fungal and bacterial communities of Adenium obesum, Aloe dhufarensis and Cleome austroarabica using next-generation sequencing approaches. A. obesum and A. dhufarensis grows in dry tropical and C. austroarabica in arid conditions of Arabian Peninsula. The results indicated the presence of 121 fungal and 3662 bacterial operational taxonomic units (OTUs) whilst microbial diversity was significantly high in the rhizosphere of A. obesum and A. dhufarensis and low …


Benchmarking Impact Of Nitrogen Inputs On Grain Yield And Environmental Performance Of Producer Fields In The Western Us Corn Belt, Fatima A.M. Tenorio, Eileen L. Mclellan, Alison J. Eagle, Kenneth G. Cassman, Daryl Andersen, Marie Krausnick, Russell Oaklund, John Thorburn, Patricio Grassini Jan 2020

Benchmarking Impact Of Nitrogen Inputs On Grain Yield And Environmental Performance Of Producer Fields In The Western Us Corn Belt, Fatima A.M. Tenorio, Eileen L. Mclellan, Alison J. Eagle, Kenneth G. Cassman, Daryl Andersen, Marie Krausnick, Russell Oaklund, John Thorburn, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Benchmarking crop yields against nitrogen (N) input levels can help provide opportunities to improve N ferti-lizer efficiency and reduce N losses on maize in the US Corn Belt by identifying fields most likely to benefit from improved N management practices. Here, we evaluated a large producer database that includes field-level data on yield and applied N inputs from 9280 irrigated and rainfed fields over a 7-year period (2009–2015) in Nebraska (USA). A spatial framework, based on technology extrapolation domains, was used to cluster each field into spatial units with similar climate and soil type that represent 1.3 million ha of …


Leveraging Genome-Enabled Growth Models To Study Shoot Growth Responses To Water Deficit In Rice, Malachy T. Campbell, Alexandre Grondin, Harkamal Walia, Gota Morota Jan 2020

Leveraging Genome-Enabled Growth Models To Study Shoot Growth Responses To Water Deficit In Rice, Malachy T. Campbell, Alexandre Grondin, Harkamal Walia, Gota Morota

Department of Agronomy and Horticulture: Faculty Publications

lucidating genotype-by-environment interactions and partitioning its contribution to phenotypic variation remains a challenge for plant scientists. We propose a framework that utilizes genome-wide markers to model genotype-specific shoot growth trajectories as a function of time and soil water availability. A rice diversity panel was phenotyped daily for 21 d using an automated, high-throughput image-based, phenotyping platform that enabled estimation of daily shoot biomass and soil water content. Using these data, we modeled shoot growth as a function of time and soil water content, and were able to determine the time point where an inflection in the growth trajectory occurred. We …


Training Future Agriculture Professionals In Landowner–Tenant Conservation Decision-Making, Andrea Basche, Angie Carter Jan 2020

Training Future Agriculture Professionals In Landowner–Tenant Conservation Decision-Making, Andrea Basche, Angie Carter

Department of Agronomy and Horticulture: Faculty Publications

The landowner–tenant relationship is important to the implementation of conser- vation on agricultural lands. Women own or co-own a significant portion of U.S. farmland yet are underrepresented in conservation research. The next generation of agriculture professionals can benefit from first-hand experience in assisting women landowners and their tenants in navigating the complexities of conser- vation decision-making. This article analyzes undergraduate student perceptions of landowner–tenant relationships in conservation management through their engagement in case studies with women landowner–tenant pairs in the Western Corn Belt. Student groups were asked to complete a management improvement plan that both incorporated the agronomic and conservation …


Is Allelopathy From Winter Cover Crops Affecting Row Crops?, Katja Koehler-Cole, Sydney Everhart, Yan Gu, Christopher A. Proctor, Margarita Marroquin-Guzman, Daren Redfearn, Roger W. Elmore Jan 2020

Is Allelopathy From Winter Cover Crops Affecting Row Crops?, Katja Koehler-Cole, Sydney Everhart, Yan Gu, Christopher A. Proctor, Margarita Marroquin-Guzman, Daren Redfearn, Roger W. Elmore

Department of Agronomy and Horticulture: Faculty Publications

Cover crops (CC) have been explored in corn (Zea mays L.), cotton (Gossypium hirsutum L.), soybean [Glycine max (L.) Merr.], and wheat (Triticum aestivum L.) systems for their allelopathic potential to control weeds. However, allelopathic compounds may negatively affect these row crops by reducing germination, emergence, and grain yields. We reviewed studies that document allelopathic effects of CC on subsequent row crops in field and laboratory settings. We summarize the influence of CC management, including biomass production, planting and termination timing on allelochemical quantity. Our review found few studies documenting allelopathic effects of CC on row …