Plant Biology Commons^™

Plant Diversity In Laos, And Its Strategic Significance For Building China-Laos Community With A Shared Future For Biodiversity, Meng Honghu, Bo Li, Wenbin Yu, Yaowu Xing

Bulletin of Chinese Academy of Sciences (Chinese Version)

Laos is the first country to sign the bilateral cooperation document for construction of the community with a shared future with China. Over the years, Laos and China have established clear directions for cooperation in politics, economy, security, culture, and ecology, opening a new chapter in the development of China-Laos relations. At present, global environmental governance is facing severe challenges, and the biodiversity loss has become a major international issue of growing concern. Nevertheless, biodiversity conservation and sustainable development remain relatively limited. Laos shares a boarder with China and is characterized by complex natural environments with rich plant resource. Yet, …

Adapting Population Genetics, Practice, And Policy For Plant Conservation In A Changing World, Cooper M. Kimball-Rhines

Graduate Doctoral Dissertations

Biodiversity conservation is an inherently interdisciplinary goal that requires effective collaboration among academics, ecosystem managers, policymakers, and other stakeholders. Codesigning research with these groups ensures experiments are useful and improves adoption of policy and practice recommendations while advancing our understanding of basic science. This dissertation explores the power of codesigned research in shaping plant conservation strategies using stakeholder engagement, causal inference, demographic modeling, and multi-omic sequencing techniques. In chapter 1 I discuss the history of New England ecosystems and the need for research-driven changes to plant conservation policy and practice in the face of global change. In chapter 2, I …

Unearthing Misconceptions And Opinions In An Established Pollinator Project, Stella Holstrom

InnovateHER Meeting 2026

The Sartell High School has 13 acres of pollinator fields that were cultivated within the last 3 years. While the main part of the garden has signage, it is far from the more visible parts of the gardens. Over the last three years, there has been some negative feedback about the gardens, much of which seems to come from a place of ignorance by the public. A literature review about pollinator project and their benefits establishes that most research has surround bees or plants, but not usually both or the public reaction to pollinator gardens. My hypothesis was that most …

Impact Of Land-Use Disturbances On The Composition Of Wetland Plant Communities Across The Conterminous United States, Maya Merchant

Undergraduate Honors Theses

Due to the threat of invasive species on wetland biodiversity, it is critical to assess factors driving their proliferation in wetlands. To address this growing need, this project analyzes relationships between non-native species and known anthropogenic disturbance types associated with increased biological invasions. Using the U.S. EPA’s 2021 National Wetland Condition Assessment, the relationship between non-native species (diversity, richness, and coverage) and surrounding land-use within 500, 1,000, and 3,000-meter buffers was evaluated. To explore patterns across larger spatial scales, mean non-native species diversity, richness, and coverage was calculated at the watershed level and compared to associated percentages of agricultural land …

Testing The Intermediate Disturbance Hypothesis On Anthropogenic Pressure In Central Alabama, Gavin Terrell

Theses

Biodiversity is fundamental to maintaining ecosystem structure and function globally. Prior to the late 20th century, ecological theory generally predicted that biodiversity would be highest in systems experiencing minimal disturbance. However, Joseph H. Connell challenged this view with the Intermediate Disturbance Hypothesis (IDH), which posits that species diversity peaks at intermediate levels of disturbance and declines under conditions of both low and high disturbance. Although widely cited, the applicability of the IDH to natural systems remains debated, particularly in the context of anthropogenic disturbances and when diversity is measured beyond species richness alone.

This study evaluated the predictions of the …

Alabama Prairie Reconstruction: Comparing Management Pathways For A Southeastern Landscape, Cecelia R. Geyer

Theses

Southeastern prairies are highly biodiverse yet increasingly threatened by land-use change, fire suppression, and habitat fragmentation. These disturbance-dependent systems rely on periodic fire and grazing to maintain plant diversity and ecosystem function. This study evaluates prairie restoration strategies by testing predictions from the Intermediate Disturbance Hypothesis and the Patch Mosaic Burn Hypothesis. The study site was divided into three treatments: prescribed burned only (B), prescribed burned with mowing (BM) to simulate grazing, and an undisturbed control (C). A standardized mix of native plant seeds was broadcast across all treatments. Ecosystem health and function were evaluated using plant community diversity and …

Effects Of Salinity On Interactions Between Epichloë Amarillans And Fusarium Spp. In American Beachgrass, Emma G. Mills, Dylan Habeeb, Natalie Christian, Connor Morozumi

The Cardinal Edge

Effects of Salinity on interactions between Epichloë amarillans and Fusarium spp. In American Beachgrass

Emma Mills, Dylan Habeeb, Natalie Christian, Connor Morozumi

Epichloë is a well-known genus of vertically transmitted fungal endophytes in many species of grasses. In Ammophila breviligulata (American beachgrass), Epichloë amarillans is a key endophyte species known to cause chemical and morphological changes to its host and provide protection from stressors. Additionally, Epichloë is thought to influence fungal endophyte community composition within its host. However, deepening research on the interaction of Epichloë with coexisting fungal endophytes may shed further light on its role in community composition. Additionally, …

Succession And Alpine Plant Habitat Of A Recently Deglaciated Foreland In The Trinity Alps, California, Sebastian Evans

Cal Poly Humboldt theses and projects

The recent extinction of the Salmon Glacier in the Trinity Alps, California, provides a rare opportunity to examine post-glacial succession in a region of high endemism experiencing climatic stress. Using a chronosequence spanning ~150 years since deglaciation, I investigated (1) vegetation successional trajectories in the foreland, (2) whether the foreland functions as a climate refugium for alpine specialists, and (3) whether facilitative interactions between the dominant vascular plant (DVP) and bryophytes occur and persist through succession. I surveyed 100 plots across 11 transects within the foreland and 40 randomized plots in adjacent ecosystems. Successional patterns and refugial potential were analyzed …

From Theory To Ecosystems: Exploring Biodiversity And Ecosystem-Function In Pitcher Plant (Darlingtonia Californica) Microbial Communities, Gavin Sutter

Cal Poly Humboldt theses and projects

The relationship between biodiversity and ecosystem-function (BEF) has been a central focus of ecological research for the last three decades, yet the role of space in shaping BEF relationships remains relatively unknown. Research has shown that community diversity and composition can strongly influence productivity, nutrient cycling, and decomposition, but much of this work treats communities as spatially isolated, leaving open how dispersal and other spatial processes shape BEF at broader scales. To begin addressing this gap, I used microbial communities inhabiting Darlingtonia californica pitcher plant leaves to evaluate how spatial organization and successional change shape biodiversity and ecosystem-functioning. I quantified …

Clerodendrum Kelli (Lamiaceae), A New Species From Carranglan, Nueva Ecija, Philippines, And Lectotypification Of Clerodendrum Mindorense, David Justin R. Ples, Jacek Patykowski, John Charles A. Altomonte, Adriene B. Tobias, Rene Alfred Anton Bustamante

Biology Faculty Publications

Clerodendrum kelli (Lamiaceae), a new species from the montane forests of Carranglan, Nueva Ecija, Philippines, is described and illustrated. The species shares morphological features with Clerodendrum quadriloculare and C. mindorense, but differs in inflorescence structure, corolla tube length, and calyx shape and color. A lectotype for C. mindorense is also designated. Preliminary conservation assessment places C. kelli in the Critically Endangered category (CR B1ab(iii)+2ab(iii)). This study contributes to Philippine plant biodiversity knowledge and informs conservation strategies.

Nepenthes Megastoma (Nepenthaceae), A Micro-Endemic Pitcher Plant From Puerto Princesa Subterranean River National Park, Palawan, Philippines, John Charles A. Altomonte, John Paul R. Collantes, Vernaluz Mangussad, Rene Alfred Anton Bustamante, Alastair S. Robinson

Environmental Science Faculty Publications

Nepenthes megastoma is described and illustrated as a new species from the Puerto Princesa Subterranean River National Park, a UNESCO World Heritage Site in Palawan Philippines. This carnivorous tropical pitcher plant is currently known from just three locations in the Mount Saint Paul karst formation, where it grows on vertical limestone walls. Morphologically, N. megastoma is characterised by its highly branched stems, campanulate pitchers, peltate tendril exsertion, dimorphic upper pitchers, and unidirectionally upturned female flowers. It is assessed as Critically Endangered under the IUCN Red List criteria, based on its restriction to three subpopulations comprising few total individuals. Pitcher morphology …

Seagrass Persistence In The Indian River Lagoon And Lake Worth Lagoon, Florida, Kelly Kibler, Melinda Donnelly, Vincent Encomio, Madison Giuntoli, Manisha Thenuwara, Brice Bennett, Laura Andrade Barron, Mariam Sonbol, Wynter Raine Seppala, Namritha Ramakrishnan, Jennifer Jordan Báez, Beth Orlando, Irene Arpayoglou, Melissa Meisenburg

Indian River Lagoon Shorelines

The spatial dataset: UCF_seagrasspersistence_IRL_LWL.shp was created with support from the Indian River Lagoon National Estuaries Program and Florida Sea Grant. These projects cumulatively led to creation of a living shoreline restoration prioritization model and hydrodynamic habitat suitability models for 1,550 km (963 miles) of estuarine shorelines in Indian River Lagoon (IRL) and Lake Worth Lagoon (LWL). The dataset presented herein represents persistence of seagrass throughout waters of the IRL and LWL.

The Evolution And Reproduction Of Andean Miconia (Melastomataceae), Juan Angulo

Dissertations, Theses, and Capstone Projects

Understanding the factors that shape diversification and distribution in tropical plant lineages is central to explaining the origins of Neotropical biodiversity. Assessing evolutionary history with trait evolution and climatic niche dynamics provides key insights into the drivers of diversification and biogeography, while natural history data remains critical for these evolutionary studies. The Tropical Andes, with its exceptional biodiversity and environmental heterogeneity, offers an ideal setting to explore these processes. In this dissertation, I investigate how reproductive systems, climatic niche dynamics, and pollination strategies influence the evolution and biogeography of Miconia III, a large and ecologically diverse clade in the …

Bridging Prairie Restoration And Regenerative Agriculture With Compost Tea, April Hersey

2025 Symposium

Inland Pacific Northwest prairie is an endangered ecosystem that has been reduced by conversion to agriculture. There is growing interest in the role of soil microorganisms in prairie ecosystems, which may be crucial for restoration of the plant community through interspecies interactions within the soil near plant roots. One method for improving soil microorganism community composition is compost tea: enriched liquid compost extract. Compost tea is used in regenerative agriculture to improve crop yields and protect against pathogens, ostensibly through the activity of the added compost microbes. While research has supported compost tea application in regenerative agriculture, it has not …

Chromosome Evolution Model Reveals Hidden Variation In Karyotype-Driven Speciation In Ferns, Thomas Buchloh

All Theses

Because karyotype change commonly generates reproductive isolation between diverging species, rapid karyotype evolution, like that seen in plants, may increase the total rate of diversification. However, few studies have investigated this predicted relationship. Tests of this prediction have identified a positive correlation between the rate of karyotype change (specifically whole genome duplications) and diversification, but tests have been restricted to relatively small and young clades. Fortunately, novel macroevolutionary models have recently become available to investigate patterns of karyotype evolution in large phylogenies, providing new opportunity to investigate variation in karyotype driven diversification. Ferns are one of the most karyotype rich …

Influence Of Nitrogen And Phosphorus Rates On The Growth Of Water Hyacinth (Pontederia Crassipes Mart.), Mary Joy M. Abit, Rene Franchesca A. Pilar, Analiza Henedina M. Ramirez

The Philippine Agricultural Scientist

Research has been conducted globally to investigate the growth and colonization patterns of Pontederia crassipes Mart. This research aimed to examine the impact of varying rates of nitrogen (N) and phosphorus (P) on the growth of P. crassipes and determine the nutrient levels that would result in the greatest growth response. P. crassipes plants were placed in plastic containers filled with 5 L of distilled water. Nitrogen and phosphorus were applied separately at varying concentrations. Specifically, N was added at 0, 10, 20, 30, 40, or 50 mg L^-1 and P at 0, 1, 3, 5, 7, or 9 …

Spatial Analysis Of American Chestnut (Castanea Dentata) Distribution And Ecology In Kentucky’S Federal Lands, Jacob Raymond Pease

Murray State Theses and Dissertations

Anthropogenic factors have been the cause of the decline of tree species across the globe. From unsustainable logging and development to disease and improper management, threats to forests have taken their toll. The American chestnut (Castanea dentata) was once an integral basal tree species in Appalachian forests, but chestnut blight drove the species to functional extinction by the mid-1900s. The recent creation of genetically modified chestnuts gives hope for future restoration of the species throughout its historical range. Despite blight resistance, effective restoration will require optimal site selection for finding and planting chestnuts, which will maximize limited resources. …

Bioremediation In The Chesapeake Bay: Anthropogenic Ocean Acidification Mitigation In An Interactive Multi-Trophic Ecosystem, Cree Taylor

AUCTUS: The Journal of Undergraduate Research and Creative Scholarship

Zostera marina is a species of marine macrophyte that has been largely prioritized in past submerged aquatic vegetation (SAV) restoration initiatives within the Chesapeake Bay because of its 1) previous abundance, 2) demonstrated carbon burial abilities, and 3) observed ability for meadows of Z. marina to ameliorate low pH conditions. Due to the temperature variability and poor water quality in the Chesapeake Bay, Z. Marina beds have experienced several die-off events with limited capacity for regrowth. Ruppia maritima, an opportunistic species with tolerance to temperature shifts within the bay, may have the potential to maintain SAV coverage in areas …

A Mystery Of Microecology: Revealing The Ecological Relationship Between Allorhizobium Vitis And Missouri Native Grape Species, Hunter White

Graduate Theses/Dissertations

Crown gall disease can be very detrimental to grape and wine producers around the world by reducing vine vigor and yield. It is caused by the bacteria Allorhizobium vitis (A. Vitis) carrying a tumor inducing (Ti) plasmid. The A. vitis bacteria have been found in soil and cane tissues in vineyards around the world, and infect all cultivated grapes. However, there have been no reports of crown gall on native wild grapevines, and very little is known about the ecology of A. vitis in native ecosystems. I have sampled cambium tissues from three native wild grape species of …

Aquaponics Experiment For Njit Stem For Success, Christopher Tava

STEM Month

As a member of STEM for Success, I was responsible for constructing and promoting a functioning aquaponics system for the benefit of fifth grade students. With the help of NJIT funding, I was able to design, rapid prototype, and then implement a sustainable aquaponics system that was able to grow lettuce, tomatoes, and kale. Multiple challenges in the design process led to changes, further research, and the implementation of new solutions, as described in detail. Using the aquaponics knowledge gained from the experimental phase, I then led community outreach to elementary schools in my local area. Aquaponics possesses a variety …

New Insights On Hybridization In Potamogeton Floridanus (The Florida Pondweed), Kaitlyn R. Sampson

Graduate Theses and Dissertations (2019 - present)

Freshwater ecosystems are some of the most important and highest threatened habitats in the world, and aquatic plants play an important, but often-overlooked, role in maintaining them. Potamogeton is a diverse and ecologically important aquatic plant genus well known for taxonomic difficulty and rampant hybridization. lbis study aimed to 1) test the hypothesis that Potamogeton jloridanus (Florida pondweed) is a hybrid between P. oakesianus and P. pulcher, and 2) to investigate correlations in ecological conditions for the focal species. This study revealed the discovery of a new population of P. jloridanus in Big Coldwater Creek in Santa Rosa Co., FL, …

New York City’S Rising Sea Level And Coastal Erosion: Approaches To Resiliency, Ryder D. Isidro

Student Theses 2015-Present

No abstract provided.

Reconnecting With Nature One Classroom At A Time, Bianca Apuzzo

Senior Honors Projects

Environmental science is more important to today’s society than it has ever been, and developing basic ecoliteracy is the easiest way we can work towards a more sustainable future. Ecoliteracy allows us to connect deeper to nature and provides us with the information needed to protect and restore our beautiful planet. We are rolling downhill, picking up speed as we go, through a silent mass extinction. The scariest part of it all: nobody seems to care.

In response to the lack of environmental education provided to today’s students, I have created a syllabus for a high school level science course …

Cross-Pollination: Building A Co-Taught Course To Examine Art And Sex Through The Lens Of Botany, Christopher T. Martine, Diamanda A. Zizis, Anna K. Kell

Faculty Journal Articles

Driven by overlapping interests in plants, art, and diversity in sex expression, Anna Kell (Department of Art and Art History) and Chris Martine (Department of Biology) developed a course that integrates the perspectives of a visual artist and a botanist. Art & Sex Through the Lens of Botany seeks to impart the importance of making connections across disciplines and the value of visual literacy across academic lines. The course introduces foundational concepts in each field and encourages students to integrate and explore these different systems of knowledge and their intersections. In addition to developing fluencies related to both general botany …

Environmental Biology Masters Capstone, Antonio Gonzalez-Pita

Regis University Student Publications (comprehensive collection)

Human wildlife interactions (HWI) pose a complex challenge for wildlife managers. Human encroachment into wildlife habitat and the growing number of outdoor recreationists are increasing the frequency of contact and conflict, especially in regions such as the Front Range of Colorado. Geographic information systems (GIS), which use a combination of remote sensing and environmental survey data, allow for predictive spatial analyses of where human wildlife interactions are likely to occur. I used publicly reported observations of moose to create spatial predictive maps in a species distribution model framework. Slope and elevation were shown to be the strongest predictors of HWI, …

Assessing Endophyte Frequency Distributions And The Effect Of Epichloë Brachyelytri In The Chemotypic And Genotypic Diversity Of Brachyelytrum Erectum, Rachel Ann Sneed

Theses and Dissertations--Plant Pathology

Seed-transmissible epichloid fungal endophytes are best known for their roles as defensive mutualists in cool-season grasses. Historically, the discovery of fungal endophytes was driven by investigations of plant toxicity to livestock, followed by extensive study of their alkaloids and protection against insects and nematodes. Epichloae can produce four classes of alkaloids: ergot alkaloids, lolines (saturated aminopyrrolizidines), indole–diterpenes, and peramine. It is increasingly evident that these hereditary symbionts have much more diverse chemical profiles both in individual populations and between them. To this end, differences in chemotypic profiles of these symbionts may translate to different evolutionary and environmental advantages across plant …

Pioneering Plant Metabolomic Library Of Indonesian Plants For Research, Conservation, Capacity Building And Economic Development, Isabel Armas, Ernawati Sinaga, Nonon Saribanon, Noverita, Alvira Noer Effendi, Chairil Rohadi, Hanifa Nur Adilah, Vyacheslav Dushenkov, Ilya Raskin

Publications and Research

Indonesia, one of the world’s most biodiverse countries, is undergoing mass deforestation, exacerbating climate change and leading to accelerated loss of species. This project addressed the urgent need to conserve endangered Indonesian biodiversity. Specifically, the potentially life-saving bioactive compounds harbored within its plants. A group of Indonesian researchers from Universitas Nasional (UNAS) in Jakarta received training in RApid Metabolome Extraction and Storage (RAMES) technology, an ethical, low-impact, field-deployable and cost-effective methodology developed by Rutgers University. The team of Indonesian scientists used this technology to create the first metabolomic library of Indonesian plant species and an easily transportable collection containing 501 …

Quantifying The Ecological Effects Of Salix Fragilis On Riparian Habitat In Kittitas County, Washington, Landon Shaffer

All Master's Theses

Invasive species threaten plant community structure and function globally. Riparian areas, the zone near streams where water influences vegetation, are especially sensitive to invasive species colonization, suffering large-scale shifts in community composition. Salix fragilis (crack willow) is a nonnative riparian species abundant in the lower elevation tributaries of central Washington. Some speculate whether this willow should be listed as invasive in Washington, despite a lack of regional supporting evidence. I studied riparian communities dominated by either S. fragilis or native species in the Kittitas Valley and measured biodiversity, quantified differences in solar attenuation, and compared leaf decomposition rates to learn …

Reducing Food Scarcity: The Benefits Of Urban Farming, S.A. Claudell, Emilio Mejia

Journal of Nonprofit Innovation

Urban farming can enhance the lives of communities and help reduce food scarcity. This paper presents a conceptual prototype of an efficient urban farming community that can be scaled for a single apartment building or an entire community across all global geoeconomics regions, including densely populated cities and rural, developing towns and communities. When deployed in coordination with smart crop choices, local farm support, and efficient transportation then the result isn’t just sustainability, but also increasing fresh produce accessibility, optimizing nutritional value, eliminating the use of ‘forever chemicals’, reducing transportation costs, and fostering global environmental benefits.

Imagine Doris, who is …

Addressing Water Hyacinth (Pontederia Crassipes) Impacts On Aquatic Biota In Lake Okeechobee, Joseph Salerno

All HCAS Student Capstones, Theses, and Dissertations

The incursion of water hyacinth, Pontederia crassipes in Lake Okeechobee has resulted in management systems to be implemented to reduce the coverage of the invasive macrophyte. Its residence in the Lake Okeechobee ecosystem and the effects it has on organisms in the lake, whether it be positive or harmful is unknown. This study attempted to assess the potential effects that water hyacinth has on aquatic biota in Lake Okeechobee. Biotic data were collected on open water, water hyacinth covered, and native vegetation covered habitats via hook-and-line fishing, electrofishing, baited minnow traps, and the sampling of plant roots over a thirteen-month …