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Articles 961 - 990 of 1579
Full-Text Articles in Other Plant Sciences
Switchgrass Germplasm Resources, Michael D. Casler, Kenneth P. Vogel, Melanie Harrison
Switchgrass Germplasm Resources, Michael D. Casler, Kenneth P. Vogel, Melanie Harrison
Department of Agronomy and Horticulture: Faculty Publications
Switchgrass (Panicum virgatum L.) is an important native grass and dominant member of the tallgrass prairie ecosystem. It is used for conservation, restoration, livestock feed production, and bioenergy feedstock production. The purpose of this review is to describe the biological and geographical basis for switchgrass germplasm diversity and to provide a resource for scientists and outreach personnel to find switchgrass germplasm to meet their needs. Upland and lowland ecotypes represent the most important polymorphism in switchgrass, with distinct but overlapping geographic distributions. Variation in ploidy exists within both ecotypes, with 2n = 4x = 36 the dominant ploidy …
The Khmer Software Package: Enabling Efficient Nucleotide Sequence Analysis, Michael R. Crusoe, Hussien F. Alameldin, Sherine Awad, Elmar Boucher, Adam Caldwell, Reed Cartwright, Amanda Charbonneau, Bede Constantinides, Greg Edvenson, Scott Fay, Jacob Fenton, Thomas Fenzl, Jordan Fish, Leonor Garcia-Gutierrez, Phillip Garland, Jonathan Gluck, Iván González, Sarah Guermond, Jiarong Guo, Aditi Gupta, Joshua R. Herr, Adina Howe, Alex Hyer, Andreas Härpfer, Luiz Irber, Rhys Kidd, David Lin, Justin Lippi, Tamer Mansour, Pamela Mca'nulty, Eric Mcdonald, Jessica Mizzi, Kevin D. Murray, Joshua R. Nahum, Kaben Nanlohy, Alexander Johan Nederbragt, Humberto Ortiz-Zuazaga, Jeramia Ory, Jason Pell, Charles Pepe-Ranney, Zachary N. Russ, Camille Scott, Josiah Seaman, Scott Sievert 38, Jared Simpson, Connor T. Skennerton, James Spencer, Ramakrishnan Srinivasan, Daniel Standage, James A. Stapleton, Susan R. Steinman, Joe Stein, Benjamin Taylor, Will Trimble, Heather L. Wiencko, Michael Wright, Brian Wyss, Qingpeng Zhang, En Zyme, C. Titus Brown, Erich Schwarz
The Khmer Software Package: Enabling Efficient Nucleotide Sequence Analysis, Michael R. Crusoe, Hussien F. Alameldin, Sherine Awad, Elmar Boucher, Adam Caldwell, Reed Cartwright, Amanda Charbonneau, Bede Constantinides, Greg Edvenson, Scott Fay, Jacob Fenton, Thomas Fenzl, Jordan Fish, Leonor Garcia-Gutierrez, Phillip Garland, Jonathan Gluck, Iván González, Sarah Guermond, Jiarong Guo, Aditi Gupta, Joshua R. Herr, Adina Howe, Alex Hyer, Andreas Härpfer, Luiz Irber, Rhys Kidd, David Lin, Justin Lippi, Tamer Mansour, Pamela Mca'nulty, Eric Mcdonald, Jessica Mizzi, Kevin D. Murray, Joshua R. Nahum, Kaben Nanlohy, Alexander Johan Nederbragt, Humberto Ortiz-Zuazaga, Jeramia Ory, Jason Pell, Charles Pepe-Ranney, Zachary N. Russ, Camille Scott, Josiah Seaman, Scott Sievert 38, Jared Simpson, Connor T. Skennerton, James Spencer, Ramakrishnan Srinivasan, Daniel Standage, James A. Stapleton, Susan R. Steinman, Joe Stein, Benjamin Taylor, Will Trimble, Heather L. Wiencko, Michael Wright, Brian Wyss, Qingpeng Zhang, En Zyme, C. Titus Brown, Erich Schwarz
Department of Plant Pathology: Faculty Publications
The khmer package is a freely available software library for working efficiently with fixed length DNA words, or k-mers. khmer provides implementations of a probabilistic k-mer counting data structure, a compressible De Bruijn graph representation, De Bruijn graph partitioning, and digital normalization. khmer is implemented in C++ and Python, and is freely available under the BSD license at https://github.com/dib-lab/khmer.
A Unique 5' Translation Element Discovered In Triticum Mosaic Virus, Robyn Roberts, Jincan Zhang, Laura K. Mayberry, Satyanarayana Tatineni, Karen S. Browning, Aurelie M. Rakotondrafara
A Unique 5' Translation Element Discovered In Triticum Mosaic Virus, Robyn Roberts, Jincan Zhang, Laura K. Mayberry, Satyanarayana Tatineni, Karen S. Browning, Aurelie M. Rakotondrafara
Department of Plant Pathology: Faculty Publications
Several plant viruses encode elements at the 5' end of their RNAs, which, unlike most cellular mRNAs, can initiate translation in the absence of a 5' m7GpppG cap. Here, we describe an exceptionally long (739-nucleotide [nt]) leader sequence in triticum mosaic virus (TriMV), a recently emerged wheat pathogen that belongs to the Potyviridae family of positive-strand RNA viruses. We demonstrate that the TriMV 5' leader drives strong cap-independent translation in both wheat germ extract and oat protoplasts through a novel, noncanonical translation mechanism. Translation preferentially initiates at the 13th start codon within the leader sequence independently of eIF4E but involves …
Occurrence Of An Herbicide-Resistant Plant Trait In Agricultural Field Margins, Karla L. Gag, David J. Gibson, Bryan G. Young, Julie M. Young, Joseph L. Matthews, Stephen C. Weller, Robert G. Wilson
Occurrence Of An Herbicide-Resistant Plant Trait In Agricultural Field Margins, Karla L. Gag, David J. Gibson, Bryan G. Young, Julie M. Young, Joseph L. Matthews, Stephen C. Weller, Robert G. Wilson
Department of Agronomy and Horticulture: Faculty Publications
Agricultural environments allow study of evolutionary change in plants. An example of evolution within agroecological systems is the selection for resistance to the herbicide glyphosate within the weed, Conyza canadensis. Changes in survivorship and reproduction associated with the development of glyphosate resistance (GR) may impact fitness and influence the frequency of occurrence of the GR trait. We hypothesized that site characteristics and history would affect the occurrence of GR C. canadensis in field margins. We surveyed GR occurrence in field margins and asked whether there were correlations between GR occurrence and location, crop rotation, GR crop trait rotation, crop type, …
Comparing Yield Monitors With Weigh Wagons For On-Farm Corn Hybrid Evaluation, Bjorn P. Nelson, Roger Wesley Elmore, Andrew W. Lenssen
Comparing Yield Monitors With Weigh Wagons For On-Farm Corn Hybrid Evaluation, Bjorn P. Nelson, Roger Wesley Elmore, Andrew W. Lenssen
Department of Agronomy and Horticulture: Faculty Publications
For many years, on-farm yield evaluations of corn (Zea mays L.) hybrids were done with weigh wagons, handheld moisture testers, and measuring wheels. Today, most combines have continuous flow yield and moisture sensors. Published research results comparing the accuracy of combine-mounted sensor systems with that of weigh wagons are limited for on-farm corn hybrid evaluation. This study examined the accuracy of combine-mounted yield sensors with traditional weigh wagon methodology in on-farm corn hybrid strip trials. Data from combine-mounted sensors for plot weight, moisture percentage, and yield were compared with weigh wagon weight, handheld moisture testers, and calculated yield …
Genetic Engineering Online Lessons Improve Teaching And Increase Knowledge And Accepting Attitudes Among Students, Grace Troupe
Genetic Engineering Online Lessons Improve Teaching And Increase Knowledge And Accepting Attitudes Among Students, Grace Troupe
Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research
Genetic engineering has been used in the production of food in the U.S. for nearly three decades, however, science literacy in genetic engineering among consumers is still low. To address this problem, an online resource called The Journey of a Gene (passel.unl.edu/ge) was created to help incorporate genetic engineering education in high school and college curriculums. Here we report two studies conducted to evaluate the effectiveness of The Journey of a Gene in 1) improving student knowledge and attitudes about genetic engineering and 2) helping teachers increase their knowledge as well as quantity and quality of genetic engineering instruction. In …
Microsatellite Variations Of Elite Setaria Varieties Released During Last Six Decades In China, Guanqing Jia, Xiaotong Liu, James C. Schnable, Zhengang Niu, Chunfang Wang, Yuhui Li, Shujun Wang, Suying Wang, Jinrong Liu, Erhu Guo, Hui Zhi, Xianmin Diao
Microsatellite Variations Of Elite Setaria Varieties Released During Last Six Decades In China, Guanqing Jia, Xiaotong Liu, James C. Schnable, Zhengang Niu, Chunfang Wang, Yuhui Li, Shujun Wang, Suying Wang, Jinrong Liu, Erhu Guo, Hui Zhi, Xianmin Diao
Department of Agronomy and Horticulture: Faculty Publications
Crop improvement is a multifaceted micro-evolutionary process, involving changes in breeding approaches, planting configurations and consumption preferences of human beings. Recent research has started to identify the specific genes or genomic regions correlate to improved agronomic traits, however, an apparent blank between the genetic structure of crop elite varieties and their improving histories in diverse modern breeding programs is still in existence. Foxtail millet (Setaria italica) was one of the earliest cereal crops to be domesticated and served as a staple crop for early civilizations in China, where it is still widely grown today. In the present trial, …
A Microhabitat Assessment Of Five Species Of Invasive Plants In The Ozarks And Appalachians, Eric Hearth
A Microhabitat Assessment Of Five Species Of Invasive Plants In The Ozarks And Appalachians, Eric Hearth
Graduate Theses and Dissertations
Invasive species present a threat to native communities and their introduction and expansion can alter community structure and dynamics. Multiple approaches can be employed for invasive species management including prevention and detection. In this study, microhabitat assessments were conducted on colonies of five species of invasive plants, Alliaria petiolata (M. Bieb.) Cavara & Grande, Lespedeza cuneata (Dum. Cours.) G. Don, Lonicera japonica Thunb., Microstegium vimineum (Trin.) A. Camus, and Rosa multiflora Thunb. in the Ozark Plateau and Appalachians. Elevation, soil moisture, soil pH, light ratio, slope, aspect, distance to disturbance, as well as soil nutrient levels were recorded for each …
Gata-Dependent Glutaminolysis Drives Appressorium Formation In Magnaporthe Oryzae By Suppressing Tor Inhibition Of Camp/Pka Signaling, Margarita Marroquin-Guzman, Richard A. Wilson
Gata-Dependent Glutaminolysis Drives Appressorium Formation In Magnaporthe Oryzae By Suppressing Tor Inhibition Of Camp/Pka Signaling, Margarita Marroquin-Guzman, Richard A. Wilson
Department of Plant Pathology: Faculty Publications
Fungal plant pathogens are persistent and global food security threats. To invade their hosts they often form highly specialized infection structures, known as appressoria. The cAMP/ PKA- and MAP kinase-signaling cascades have been functionally delineated as positive-acting pathways required for appressorium development. Negative-acting regulatory pathways that block appressorial development are not known. Here, we present the first detailed evidence that the conserved Target of Rapamycin (TOR) signaling pathway is a powerful inhibitor of appressorium formation by the rice blast fungus Magnaporthe oryzae. We determined TOR signaling was activated in an M. oryzae mutant strain lacking a functional copy of …
The Linkages Between Photosynthesis, Productivity, Growth And Biomass In Lowland Amazonian Forests, Yadvinder Malhi, Christopher E. Doughty, Gregory R. Goldsmith, Daniel B. Metcalfe, Cécile A.J. Girardin, Toby R. Marthews, Jhon Del Aguila-Pasquel, Luiz E.O.C. Aragão, Alejandro Araujo-Murakami, Paulo Brando, Antonino C.L. Da Costa, Javier E. Silva-Espejo, Filio Farfán Amézquita, David R. Galbraith, Carlos A. Quesada, Wanderley Rocha, Norma Salinas-Revilla, Divino Silvério, Patrick Meir, Oliver L. Phillips
The Linkages Between Photosynthesis, Productivity, Growth And Biomass In Lowland Amazonian Forests, Yadvinder Malhi, Christopher E. Doughty, Gregory R. Goldsmith, Daniel B. Metcalfe, Cécile A.J. Girardin, Toby R. Marthews, Jhon Del Aguila-Pasquel, Luiz E.O.C. Aragão, Alejandro Araujo-Murakami, Paulo Brando, Antonino C.L. Da Costa, Javier E. Silva-Espejo, Filio Farfán Amézquita, David R. Galbraith, Carlos A. Quesada, Wanderley Rocha, Norma Salinas-Revilla, Divino Silvério, Patrick Meir, Oliver L. Phillips
Biology, Chemistry, and Environmental Sciences Faculty Articles and Research
Understanding the relationship between photosynthesis, net primary productivity and growth in forest ecosystems is key to understanding how these ecosystems will respond to global anthropogenic change, yet the linkages among these components are rarely explored in detail. We provide the first comprehensive description of the productivity, respiration and carbon allocation of contrasting lowland Amazonian forests spanning gradients in seasonal water deficit and soil fertility. Using the largest data set assembled to date, ten sites in three countries all studied with a standardized methodology, we find that (i) gross primary productivity (GPP) has a simple relationship with seasonal water deficit, but …
Evaluation And Association Mapping Of Resistance To Tan Spot And Stagonospora Nodorum Blotch In Adapted Winter Wheat Germplasm, Zhaohui Liu, Ibrahim El-Basyoni, Gayan Kariyawasam, Guorong Zhang, Allan Fritz, Jana Hansen, Francois Marais, Andrew Friskop, Shiaoman Chao, Eduard Akhunov, P. Stephen Baenziger
Evaluation And Association Mapping Of Resistance To Tan Spot And Stagonospora Nodorum Blotch In Adapted Winter Wheat Germplasm, Zhaohui Liu, Ibrahim El-Basyoni, Gayan Kariyawasam, Guorong Zhang, Allan Fritz, Jana Hansen, Francois Marais, Andrew Friskop, Shiaoman Chao, Eduard Akhunov, P. Stephen Baenziger
Department of Agronomy and Horticulture: Faculty Publications
Tan spot and Stagonospora nodorum blotch (SNB), often occurring together, are two economically significant diseases of wheat in the Northern Great Plains of the United States. They are caused by the fungi Pyrenophora tritici-repentis and Parastagonospora nodorum, respectively, both of which produce multiple necrotrophic effectors (NE) to cause disease. In this work, 120 hard red winter wheat (HRWW) cultivars or elite lines, mostly from the United States, were evaluated in the greenhouse for their reactions to the two diseases as well as NE produced by the two pathogens. One P. nodorum isolate (Sn4) and four Pyrenophora tritici-repentis isolates (Pti2, …
Tallgrass Prairie Vegetation Response To Spring Fires And Bison Grazing, Stephen L. Winter, Brady W. Allred, Karen R. Hickman, Samuel D. Fuhlendorf
Tallgrass Prairie Vegetation Response To Spring Fires And Bison Grazing, Stephen L. Winter, Brady W. Allred, Karen R. Hickman, Samuel D. Fuhlendorf
School of Natural Resources: Faculty Publications
Spring fires in tallgrass prairie can create environmental conditions conducive to plant growth in the subsequent growing season. Following fires, burned areas can also be attractive to grazing animals such as bison (Bison bison). Sustained grazing activity within recently burned areas can alter vegetation structure relative to nearby landscape patches that haven’t burned recently. In 2007, we collected data on bison grazing activity, vegetation structure, and the growth and reproduction of a perennial forb, Arnoglossum plantagineum, in Oklahoma tallgrass prairie. We compared these variables in landscape patches that had burned in the spring of 2007 to measurements …
The Effects Of Fungicides And Regalia Tank Mixtures On Fray Leaf Spot In Nebraska Field Corn, 2014, J. D. Harbour, T. A. Jackson-Ziems
The Effects Of Fungicides And Regalia Tank Mixtures On Fray Leaf Spot In Nebraska Field Corn, 2014, J. D. Harbour, T. A. Jackson-Ziems
Department of Plant Pathology: Faculty Publications
The objective of the trial was to compare industry fungicide programs with the microbial Regalia Rx plus fungicide tank mixtures for gray leaf spot (GLS) efficacy. Corn was grown under normal, irrigated agronomic practices at the South Central Ag Lab near Clay Center, NE. Soils were a silt loam with 6.7 pH and 1.8 % organic matter. Reduced tillage was performed to the field prior to planting. Corn (DKC 64-83 RIB, moderately susceptible to GLS) was planted at approximately 34,000 seed/A on 20 May. Seven treatments were arranged in a randomized complete block design with six replications. . . . …
Fungicide-Induced Transposon Movement In Monilinia Fructicola, Fengping Chen, Sydney E. Everhart, P. Karen Bryson, Chaoxi Luo, Xi Song, Xili Liu, Guido Schnabel
Fungicide-Induced Transposon Movement In Monilinia Fructicola, Fengping Chen, Sydney E. Everhart, P. Karen Bryson, Chaoxi Luo, Xi Song, Xili Liu, Guido Schnabel
Department of Plant Pathology: Faculty Publications
Repeated applications of fungicides with a single mode of action are believed to select for pre-existing resistant strains in a pathogen population, while the impact of sub-lethal doses of such fungicides on sensitive members of the population is unknown. In this study, in vitro evidence is presented that continuous exposure of Monilinia fructicola mycelium to some fungicides can induce genetic change in form of transposon transposition. Three fungicide-sensitive M. fructicola isolates were exposed in 12 weekly transfers of mycelia to a dose gradient of demethylation inhibitor fungicide (DMI) SYP-Z048 and quinone outside inhibitor fungicide (QoI) azoxystrobin in solo or mixture …
Effect Of Y-Trellis And Vertical Shoot Positioning Training Systems On Downy Mildew And Botrytis Bunch Rot Of Grape In Highlands Of Southern Brazil, Betina Pereira De Bem, Amauri Bogo, Sydney Everhart, Ricardo Trezzi Casa, Mayra Juline Gonçalves, José Luiz Marcon Filho, Isabel Cristina Da Cunha
Effect Of Y-Trellis And Vertical Shoot Positioning Training Systems On Downy Mildew And Botrytis Bunch Rot Of Grape In Highlands Of Southern Brazil, Betina Pereira De Bem, Amauri Bogo, Sydney Everhart, Ricardo Trezzi Casa, Mayra Juline Gonçalves, José Luiz Marcon Filho, Isabel Cristina Da Cunha
Department of Plant Pathology: Faculty Publications
Downy mildew (Plasmopara viticola) and botrytis bunch rot (Botrytis cinerea) are important diseases in the highlands of Santa Catarina State, a relatively new wine-growing region in Brazil. Although it is known that training systems can affect microclimate and subsequent disease development, this has not been examined in the highlands of Brazil. Thus, the purpose of this study was to evaluate the influence of Y-trellis (YT) and vertical shoot positioning (VSP) training system on downy mildew and botrytis bunch rot disease development in “Cabernet Sauvignon” cultivar. Experiments were carried out in commercial vineyards in São Joaquim, SC …
Weather Variability And Disease Management Strategies, Kevin Korus, Tony O. Adesemoye, Loren Giesler, Robert M. Harveson, Tamra A. Jackson-Ziems, Stephen N. Wegulo
Weather Variability And Disease Management Strategies, Kevin Korus, Tony O. Adesemoye, Loren Giesler, Robert M. Harveson, Tamra A. Jackson-Ziems, Stephen N. Wegulo
Department of Plant Pathology: Faculty Publications
This year’s title of “weather variability and disease management strategies” was chosen because we need to remember how weather conditions this year have impacted crop productivity and disease development. This will enable us to look forward and develop better management decisions for future growing seasons. Agricultural production is dependent on many climatic factors such as rain, humidity, temperature, and sunlight. These climate conditions have direct effects on yield as well as other indirect effects. One specific indirect effect of extreme weather events is increased pressure from pathogens and pests. Plant pathogens are commonly favored by very specific, and sometimes extreme, …
Characterization Of Novel Sorghum Brown Midrib Mutants From An Ems-Mutagenized Population, Scott E. Sattler, Ana Saballos, Zhanguo Xin, Deanna L. Funnell-Harris, Wilfred Vermerris, Jeffrey F. Pedersen
Characterization Of Novel Sorghum Brown Midrib Mutants From An Ems-Mutagenized Population, Scott E. Sattler, Ana Saballos, Zhanguo Xin, Deanna L. Funnell-Harris, Wilfred Vermerris, Jeffrey F. Pedersen
Department of Agronomy and Horticulture: Faculty Publications
Reducing lignin concentration in lignocellulosic biomass can increase forage digestibility for
ruminant livestock and saccharification yields of biomass for bioenergy. In sorghum (Sorghum bicolor (L.) Moench) and several other C4 grasses, brown midrib (bmr) mutants have been shown to reduce lignin concentration. Putative bmr mutants isolated from an EMS-mutagenized population were characterized and classified based on their leaf midrib phenotype and allelism tests with the previously described sorghum bmr mutants bmr2, bmr6, and bmr12. These tests resulted in the identification of additional alleles of bmr2, bmr6, and bmr12, and, in addition, six bmr …
Assessment Of Rice Self-Sufficiency In 2025 In Eight African Countries, P. A.J. Van Oort, K. Saito, E. Amovin-Assagba, Lenny G.J. Van Bussel, Justin Van Wart, Hugo De Groot, Martin K. Van Ittersum, Kenneth Cassman, M. C.S. Wopereis
Assessment Of Rice Self-Sufficiency In 2025 In Eight African Countries, P. A.J. Van Oort, K. Saito, E. Amovin-Assagba, Lenny G.J. Van Bussel, Justin Van Wart, Hugo De Groot, Martin K. Van Ittersum, Kenneth Cassman, M. C.S. Wopereis
Department of Agronomy and Horticulture: Faculty Publications
Most African countries are far from self-sufficient in meeting their rice consumption; in eight countries the production: consumption ratio, ranged from 0.16 to 1.18 in 2012. We show that for the year 2025, with population growth, diet change and yield increase on existing land (intensification), countries cannot become fully self-sufficient in rice. This implies that for the future, a mixture of area expansion and imports will be needed on top of yield gap closure. Further research is needed for identification of most suitable new land for rice area expansion and areas that should be protected.
Patch Burning: Implications On Water Erosion And Soil Properties, Altingul Ozaslan Parlak, Mehmet Parlak, Humberto Blanco-Canqui, Walter H. Schacht, John A. Guretzky, Martha Mamo
Patch Burning: Implications On Water Erosion And Soil Properties, Altingul Ozaslan Parlak, Mehmet Parlak, Humberto Blanco-Canqui, Walter H. Schacht, John A. Guretzky, Martha Mamo
Department of Agronomy and Horticulture: Faculty Publications
Patch burning can be a potential management tool to create grassland heterogeneity and enhance forage productivity and plant biodiversity, but its impacts on soil and environment have not been widely documented. In summer 2013, we studied the effect of time after patch burning (4 mo after burning [recently burned patches], 16 mo after burning [older burned patches], and unburned patches [control]) on vegetative cover, water erosion, and soil properties on a patch-burn experiment established in 2011 on a Yutan silty clay loam near Mead, NE. The recently burned patches had 29 ± 8.0% (mean ± SD) more bare ground, 21 …
Foliar Fungicide Comparisons For Gray Leaf Spot Management And Lodging In Nebraska Field Corn, 2014, J. D. Harbour, T. A. Jackson-Ziems
Foliar Fungicide Comparisons For Gray Leaf Spot Management And Lodging In Nebraska Field Corn, 2014, J. D. Harbour, T. A. Jackson-Ziems
Department of Plant Pathology: Faculty Publications
The objective of the trial was to compare foliar fungicides with other fungicide programs for gray leaf spot (GLS) efficacy. Corn was grown under normal, irrigated agronomic practices at the South Central Ag Lab near Clay Center, NE. Soils were a silt loam with 6.7 pH and 1.8 % organic matter, and the previous crop was corn. Reduced tillage was performed to the field prior to planting. Corn (DKC 64-83 RIB, moderately susceptible to GLS) was planted at approximately 34,000 seed/A on 20 May. Eleven treatments were arranged in a randomized complete block design with six replications. . . . …
Corn Disease Update, Tamra A. Jackson-Ziems
Corn Disease Update, Tamra A. Jackson-Ziems
Department of Plant Pathology: Faculty Publications
The harsh growing conditions during 2014 contributed to several disease problems in corn, in spite of the overall high yields across the state. The extended cold and wet conditions early in the season led to development of seedling diseases and crop stress. Then, in many parts of the state, repeated and unprecedented strong storms battered and wounded crops with multiple and widespread hail events, high winds, very heavy rain, and devastating tornadoes. Many fields were planted late or replanted, some more than once, further delaying the crop. Cool summer and fall conditions delayed maturity and led to early frost events …
What’S New In Plant Pathology, Tamra A. Jackson-Ziems, Loren Giesler, Robert M. Harveson, Stephen N. Wegulo, Kevin A. Korus, Tony O. Adesemoye
What’S New In Plant Pathology, Tamra A. Jackson-Ziems, Loren Giesler, Robert M. Harveson, Stephen N. Wegulo, Kevin A. Korus, Tony O. Adesemoye
Department of Plant Pathology: Faculty Publications
Extension Plant Pathology Team Update
Changes to the Plant Disease Management Section of the 2015 Weed Guide
During the past year, several new products have become available for disease management. These products and additional products have been added to the Plant Disease Management Section of the 2015 Weed Guide. Products added to the Weed Guide have been summarized in Tables 1-3.
Table 1. Foliar Products
Table 2. Seed Treatment Products
Table 3. Seed Treatment Nematicides
Differentiating Chemical And Disease Symptoms In The Field, Kevin A. Korus, Loren J. Giesler, Robert M. Harveson, Tamra A. Jackson-Ziems, Lowell Sandell, Stephen Wegulo
Differentiating Chemical And Disease Symptoms In The Field, Kevin A. Korus, Loren J. Giesler, Robert M. Harveson, Tamra A. Jackson-Ziems, Lowell Sandell, Stephen Wegulo
Department of Plant Pathology: Faculty Publications
In years with conditions favorable for seedling disease and other disease there are typically concerns and inquiries about the cause(s) of symptoms in agronomic plants. Many of the questions focus on differentiating between plant injuries potentially caused by recent herbicide applications versus symptoms caused by plant pathogens. Chemical injury in row crops is caused by chemicals such as herbicides, fertilizers, fungicides, insecticides, growth regulators, and crop oils when they are applied individually, as a mixture, or together with adjuvants. If chemicals are applied incorrectly, plants may be damaged at any point during the growing season. Chemical injury can result from …
Effect Of Waxy (Low Amylose) On Fungal Infection Of Sorghum Grain, Deanna L. Funnell-Harris, Scott E. Sattler, Patrick M. O'Neill, Kent M. Eskridge, Jeffrey F. Pedersen
Effect Of Waxy (Low Amylose) On Fungal Infection Of Sorghum Grain, Deanna L. Funnell-Harris, Scott E. Sattler, Patrick M. O'Neill, Kent M. Eskridge, Jeffrey F. Pedersen
Department of Plant Pathology: Faculty Publications
Loss of function mutations in waxy, encoding granule bound starch synthase (GBSS) that synthesizes amylose, results in starch granules containing mostly amylopectin. Low amylose grain with altered starch properties has increased usability for feed, food, and grain-based ethanol. In sorghum, two classes of waxy (wx) alleles had been characterized for absence or presence of GBSS: wxa (GBSS-) and wxb (GBSS+, with reduced activity). Field-grown grain of wild-type; waxy, GBSS-; and waxy, GBSS+ plant introduction accessions were screened for fungal infection. Overall, results showed that waxy grains were not more susceptible than …
Multi-Year Pathogen Survey Of Biofuel Switchgrass Breeding Plots Reveals High Prevalence Of Infections By Panicum Mosaic Virus And Its Satellite Virus, Catherine L. Stewart, Jesse D. Pyle, Charlene C. Jochum, Kenneth P. Vogel, Gary Y. Yuen, Karen-Beth G. Scholthof
Multi-Year Pathogen Survey Of Biofuel Switchgrass Breeding Plots Reveals High Prevalence Of Infections By Panicum Mosaic Virus And Its Satellite Virus, Catherine L. Stewart, Jesse D. Pyle, Charlene C. Jochum, Kenneth P. Vogel, Gary Y. Yuen, Karen-Beth G. Scholthof
Department of Plant Pathology: Faculty Publications
Switchgrass (Panicum virgatum) cultivars are currently under development as lignocellulosic feedstock. Here we present a survey of three established switchgrass experimental nurseries in Nebraska in which we identified Panicum mosaic virus (PMV) as the most prevalent virus. In 2012, 72% of 139 symptomatic plants tested positive for PMV. Of the PMV-positive samples, 19% were coinfected with its satellite virus (SPMV). Less than 14% of all sampled plants in 2012 were positive for four additional viruses known to infect switchgrass. In 2013, randomized sampling of switchgrass individuals from the same 2012 breeding plots revealed that infection by PMV or PMV+SPMV …
In Vitro Transcripts Of Wild-Type And Fluorescent Protein-Tagged Triticum Mosaic Virus (Family Potyviridae) Are Biologically Active In Wheat, Satyanarayana Tatineni, Anthony J. Mcmechan, Melissa Bartels, Gary L. Hein, Robert A. Graybosch
In Vitro Transcripts Of Wild-Type And Fluorescent Protein-Tagged Triticum Mosaic Virus (Family Potyviridae) Are Biologically Active In Wheat, Satyanarayana Tatineni, Anthony J. Mcmechan, Melissa Bartels, Gary L. Hein, Robert A. Graybosch
Department of Plant Pathology: Faculty Publications
Triticum mosaic virus (TriMV) (genus Poacevirus, family Potyviridae) is a recently described eriophyid mite-transmitted wheat virus. In vitro RNA transcripts generated from full-length cDNA clones of TriMV proved infectious on wheat. Wheat seedlings inoculated with in vitro transcripts elicited mosaic and mottling symptoms similar to the wildtype virus, and the progeny virus was efficiently transmitted by wheat curl mites, indicating that the cloned virus retained pathogenicity, movement, and wheat curl mite transmission characteristics. A series of TriMV-based expression vectors was constructed by engineering a green fluorescent protein (GFP) or red fluorescent protein (RFP) open reading frame with homologous …
Fine-Scale Genetic Structure Of Monilinia Fructicola During Brown Rot Epidemics Within Individual Peach Tree Canopies, Sydney E. Everhart, H. Scherm
Fine-Scale Genetic Structure Of Monilinia Fructicola During Brown Rot Epidemics Within Individual Peach Tree Canopies, Sydney E. Everhart, H. Scherm
Department of Plant Pathology: Faculty Publications
The purpose of this study was to determine the fine-scale genetic structure of populations of the brown rot pathogen Monilinia fructicola within individual peach tree canopies to better understand within-tree plant pathogen diversity and to complement previous work on spatiotemporal development of brown rot disease at the canopy level. Across 3 years in a total of six trees, we monitored disease development, collected isolates from every M. fructicola symptom during the course of the season, and created high-resolution three-dimensional maps of all symptom and isolate locations within individual canopies using an electromagnetic digitizer. Each canopy population (65 to 173 isolates …
Recommendations Of Generic Names In Diaporthales Competing For Protection Or Use, Amy Y. Rossman, Gerard C. Adams, Paul F. Cannon, Lisa A. Castlebury, Pedro W. Crous, Marieka Gryzenhout, Walter M. Jaklitsch, Luis C. Mejia, Dmitar Stoykov, Dhanushka Udayanga, Hermann Voglmayr, Donald M. Walker
Recommendations Of Generic Names In Diaporthales Competing For Protection Or Use, Amy Y. Rossman, Gerard C. Adams, Paul F. Cannon, Lisa A. Castlebury, Pedro W. Crous, Marieka Gryzenhout, Walter M. Jaklitsch, Luis C. Mejia, Dmitar Stoykov, Dhanushka Udayanga, Hermann Voglmayr, Donald M. Walker
Department of Plant Pathology: Faculty Publications
In advancing to one name for fungi, this paper treats generic names competing for use in the order Diaporthales (Ascomycota, Sordariomycetes) and makes a recommendation for the use or protection of one generic name among synonymous names that may be either sexually or asexually typified. A table is presented that summarizes these recommendations. Among the genera most commonly encountered in this order, Cytospora is recommended over Valsa and Diaporthe over Phomopsis. New combinations are introduced for the oldest epithet of important species in the recommended genus. These include Amphiporthe tiliae, Coryneum lanciforme, Cytospora brevispora, C. ceratosperma, C. …
Species Associated With Cytospora Canker On Populus Tremuloides, Jeff B. Kepley, F. Brent Reeves, William R. Jacobi, Gerard C. Adams
Species Associated With Cytospora Canker On Populus Tremuloides, Jeff B. Kepley, F. Brent Reeves, William R. Jacobi, Gerard C. Adams
Department of Plant Pathology: Faculty Publications
A new species that is often associated with Cytospora chrysosperma was found commonly on stems of Populus tremuloides in Colorado. This fungus is illustrated and described as Cytospora notastroma sp. nov., and morphological and molecular data demonstrate that the new species is distinct from C. chrysosperma, C. nivea, C. translucens, and other species found on Populus. Diagnostic features are superficially visible, darkly pigmented conceptacles circumscribing the ascostromata and conidiomata and surrounding the white to grayish-white discs; some isolates produce a Phialocephala-like synanamorph in vitro in addition to the Cytospora anamorph.
Plant Functional Traits Of Dominant Native And Invasive Species In Mediterranean-Climate Ecosystems, Jennifer L. Funk, Rachel J. Standish, William D. Stock, Fernando Valladares
Plant Functional Traits Of Dominant Native And Invasive Species In Mediterranean-Climate Ecosystems, Jennifer L. Funk, Rachel J. Standish, William D. Stock, Fernando Valladares
Biology, Chemistry, and Environmental Sciences Faculty Articles and Research
The idea that dominant invasive plant species outperform neighboring native species through higher rates of carbon assimilation and growth is supported by several analyses of global datasets. However, theory suggests that native and invasive species occurring in low-resource environments will be functionally similar, as environmental factors restrict the range of observed physiological and morphological trait values. We measured resource-use traits in native and invasive plant species across eight diverse vegetation communities distributed throughout the five Mediterranean-climate regions, which are drought-prone and increasingly threatened by human activities including the introduction of exotic species. Traits differed strongly across the five regions. In …