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Articles 331 - 360 of 1579

Full-Text Articles in Other Plant Sciences

Genome-Wide Discovery Of Natural Variation In Pre-Mrna Splicing And Prioritising Causal Alternative Splicing To Salt Stress Response In Rice, Huihui Yu, Qian Du, Malachy Campbell, Bin Yu, Harkamal Walia, Chi Zhang Jan 2021

Genome-Wide Discovery Of Natural Variation In Pre-Mrna Splicing And Prioritising Causal Alternative Splicing To Salt Stress Response In Rice, Huihui Yu, Qian Du, Malachy Campbell, Bin Yu, Harkamal Walia, Chi Zhang

Department of Agronomy and Horticulture: Faculty Publications

Pre-mRNA splicing is an essential step for the regulation of gene expression. In order to specifically capture splicing variants in plants for genome-wide association studies (GWAS), we developed a software tool to quantify and visualise Variations of Splicing in Population (VASP). VASP can quantify splicing variants from short-read RNA-seq datasets and discover genotype-specific splicing (GSS) events, which can be used to prioritise causal pre-mRNA splicing events in GWAS. We applied our method to an RNA-seq dataset with 328 samples from 82 genotypes from a rice diversity panel exposed to optimal and saline growing conditions. In total, 764 significant GSS events …

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Gwas Revealed Effect Of Genotype × Environment Interactions For Grain Yield Of Nebraska Winter Wheat, Shamseldeen Eltaher, P Stephen Baenziger, Vikas Belamkar, Hamdy A. Emara, Ahmed A. Nower, Khaled F.M. Salem, Ahmad M. Alqudah, Ahmed Sallam Jan 2021

Gwas Revealed Effect Of Genotype × Environment Interactions For Grain Yield Of Nebraska Winter Wheat, Shamseldeen Eltaher, P Stephen Baenziger, Vikas Belamkar, Hamdy A. Emara, Ahmed A. Nower, Khaled F.M. Salem, Ahmad M. Alqudah, Ahmed Sallam

Department of Agronomy and Horticulture: Faculty Publications

Background: Improving grain yield in cereals especially in wheat is a main objective for plant breeders. One of the main constrains for improving this trait is the G × E interaction (GEI) which affects the performance of wheat genotypes in different environments. Selecting high yielding genotypes that can be used for a target set of environments is needed. Phenotypic selection can be misleading due to the environmental conditions. Incorporating information from phenotypic and genomic analyses can be useful in selecting the higher yielding genotypes for a group of environments. Results: A set of 270 F3:6 wheat genotypes in the …

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Widespread Mortality Of Trembling Aspen (Populus Tremuloides) Throughout Interior Alaskan Boreal Forests Resulting From A Novel Canker Disease, Roger W. Ruess, Loretta M. Winton, Gerard C. Adams Jan 2021

Widespread Mortality Of Trembling Aspen (Populus Tremuloides) Throughout Interior Alaskan Boreal Forests Resulting From A Novel Canker Disease, Roger W. Ruess, Loretta M. Winton, Gerard C. Adams

Department of Plant Pathology: Faculty Publications

Over the past several decades, growth declines and mortality of trembling aspen throughout western Canada and the United States have been linked to drought, often interacting with outbreaks of insects and fungal pathogens, resulting in a “sudden aspen decline” throughout much of aspen’s range. In 2015, we noticed an aggressive fungal canker causing widespread mortality of aspen throughout interior Alaska and initiated a study to quantify potential drivers for the incidence, virulence, and distribution of the disease. Stand-level infection rates among 88 study sites distributed across 6 Alaska ecoregions ranged from <1 to 69%, with the proportion of trees with canker that were dead averaging 70% across all sites. The disease is most prevalent north of the Alaska Range within the Tanana Kuskokwim ecoregion. Modeling canker probability as a function of ecoregion, stand structure, landscape position, and climate revealed that smaller-diameter trees in older stands with greater aspen basal area have the highest canker incidence and mortality, while younger trees in younger stands appear virtually immune to the disease. Sites with higher summer vapor pressure deficits had significantly higher levels of canker infection and mortality. We believe the combined effects of this novel fungal canker pathogen, drought, and the persistent aspen leaf miner outbreak are triggering feedbacks between carbon starvation and hydraulic failure that are ultimately driving widespread mortality. Warmer early-season temperatures and prolonged late summer drought are leading to larger and more severe wildfires throughout interior Alaska that are favoring a shift from black spruce to forests dominated by Alaska paper birch and aspen. Widespread aspen mortality fostered by this rapidly spreading pathogen has significant implications for successional dynamics, ecosystem function, and feedbacks to disturbance regimes, particularly on sites too dry for Alaska paper birch.

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Seed-Shattering Phenology At Soybean Harvest Of Economically Important Weeds In Multiple Regions Of The United States. Part 2: Grass Species, Lauren M. Schwartz-Lazaro, Lovreet S. Shergill, Jeffrey A. Evans, Muthukumar V. Bagavathiannan, Shawn C. Beam, Mandy D. Bish, Jason A. Bond, Kevin W. Bradley, William S. Curran, Adam S. Davis, Wesley J. Everman, Michael L. Flessner, Steven C. Haring, Nicholas R. Jordan, Nicholas E. Korres, John L. Lindquist, Jason K. Norsworthy, Tameka L. Sanders, Larry E. Steckel, Mark J. Vangessel, Blake Young, Steven B. Mirsky Jan 2021

Seed-Shattering Phenology At Soybean Harvest Of Economically Important Weeds In Multiple Regions Of The United States. Part 2: Grass Species, Lauren M. Schwartz-Lazaro, Lovreet S. Shergill, Jeffrey A. Evans, Muthukumar V. Bagavathiannan, Shawn C. Beam, Mandy D. Bish, Jason A. Bond, Kevin W. Bradley, William S. Curran, Adam S. Davis, Wesley J. Everman, Michael L. Flessner, Steven C. Haring, Nicholas R. Jordan, Nicholas E. Korres, John L. Lindquist, Jason K. Norsworthy, Tameka L. Sanders, Larry E. Steckel, Mark J. Vangessel, Blake Young, Steven B. Mirsky

Department of Agronomy and Horticulture: Faculty Publications

Seed shatter is an important weediness trait on which the efficacy of harvest weed seed control (HWSC) depends. The level of seed shatter in a species is likely influenced by agroecological and environmental factors. In 2016 and 2017, we assessed seed shatter of eight economically important grass weed species in soybean [Glycine max (L.) Merr.] from crop physiological maturity to 4 wk after maturity at multiple sites spread across 11 states in the southern, northern, and mid-Atlantic United States. From soybean maturity to 4 wk after maturity, cumulative percent seed shatter was lowest in the southern U.S. regions and increased …

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Coal Char Effects On Soil Chemical Properties And Maize Yields In Semi-Arid Region, Dinesh Panday, Maysoon M. Mikha, Xiaocun Sun, Bijesh Maharjan Jan 2021

Coal Char Effects On Soil Chemical Properties And Maize Yields In Semi-Arid Region, Dinesh Panday, Maysoon M. Mikha, Xiaocun Sun, Bijesh Maharjan

Department of Agronomy and Horticulture: Faculty Publications

Soil amendments with high carbon (C) content can be effective in semi-arid regions where soils are characterized by low C. A field study was conducted in 2016–2018 to evaluate the effect of char on soil chemical properties and irrigated maize (Zea mays L.) yields in sandy loam fertilized with urea or composted manure. Carbon-rich char used was a product of coal combustion residue from a local factory in western Nebraska. The experiment was arranged in a split-plot randomized complete block design in four replications with char (0, 6.7, 13.4, 20.1, and 26.8Mg C ha−1) as main and …

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A Comparison Of Media To Determine Optimal Growth In Aquaponics: Prg Virtual Showcase January 2021, Rachel L. Fogle, Andrea Nagy, Claribel Asare, Steven Berry, Jordan Brown, Aquila Durham-Lewis Jan 2021

A Comparison Of Media To Determine Optimal Growth In Aquaponics: Prg Virtual Showcase January 2021, Rachel L. Fogle, Andrea Nagy, Claribel Asare, Steven Berry, Jordan Brown, Aquila Durham-Lewis

Harrisburg University Presidential Research Grants

No abstract provided.

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Transcriptomics Reveals The Putative Mycoparasitic Strategy Of The Mushroom Entoloma Abortivum On Species Of The Mushroom Genus Armillaria, Rachel A. Koch, Joshua R. Herr Jan 2021

Transcriptomics Reveals The Putative Mycoparasitic Strategy Of The Mushroom Entoloma Abortivum On Species Of The Mushroom Genus Armillaria, Rachel A. Koch, Joshua R. Herr

Department of Plant Pathology: Faculty Publications

During mycoparasitism, a fungus—the host—is parasitized by another fungus—the mycoparasite. The genetic underpinnings of these relationships have been best characterized in ascomycete fungi. However, within basidiomycete fungi, there are rare instances of mushroom-forming species parasitizing the reproductive structures, or sporocarps, of other mushroom-forming species, which have been rarely investigated on a genetic level. One of the most enigmatic of these occurs between Entoloma abortivum and species of Armillaria, where hyphae of E. abortivum are hypothesized to disrupt the development of Armillaria sporocarps, resulting in the formation of carpophoroids. However, it remains unknown whether carpophoroids are the direct result of …

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Genetic (Co)Variation And Accuracy Of Selection For Resistance To Viral Mosaic Disease And Production Traits In An Inter-Ecotypic Switchgrass Breeding Population, Serge J. Edmé, Gautam Sarath, Nathan Palmer, Gary Y. Yuen, Anthony A. Muhle, Rob Mitchell, Satyanarayana Tatineni, Christian Tobias Jan 2021

Genetic (Co)Variation And Accuracy Of Selection For Resistance To Viral Mosaic Disease And Production Traits In An Inter-Ecotypic Switchgrass Breeding Population, Serge J. Edmé, Gautam Sarath, Nathan Palmer, Gary Y. Yuen, Anthony A. Muhle, Rob Mitchell, Satyanarayana Tatineni, Christian Tobias

Department of Plant Pathology: Faculty Publications

Obtaining good accuracy and reliability of estimated breeding values is essential to increase the efficiency of a plant breeding program. Genetic variation was assessed for categorical (Virc) and binary (Virb) mosaic (caused by Panicum mosaic virus), dry matter (DMY) and predicted ethanol (Etoh) yields, and lignin content (Klason or KL, and acid-detergent or ADL) in a Summer–Kanlow switchgrass (Panicum virgatum L.) population. Breeding values were predicted with the restricted maximum likelihood–best linear unbiased prediction (REML-BLUP) approaches using a multivariate phenotypic (PBLUP) and animal (ABLUP) models, integrating a three-generation pedigree (1,622 half-sibs) in ABLUP and not in PBLUP. Models …

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Poplar Allene Oxide Synthase 1 Gene Promoter Drives Rapid And Localized Expression By Wounding, Bin Lei, Christopher J. Frost, Tao Xu, Joshua Herr, John E. Carlson, Haiying Liang Jan 2021

Poplar Allene Oxide Synthase 1 Gene Promoter Drives Rapid And Localized Expression By Wounding, Bin Lei, Christopher J. Frost, Tao Xu, Joshua Herr, John E. Carlson, Haiying Liang

Department of Plant Pathology: Faculty Publications

Promoters play critical roles in controlling the transcription of genes and are important as tools to drive heterologous expression for biotechnological applications. In addition to core transcription factor-binding motifs that assist in the binding of RNA polymerases, there are specific nucleotide sequences in a promoter region to allow regulation of gene expression. The allene oxide synthase (AOS) gene family are cytochrome P450s that are responsive to a variety of environmental stress, making them good candidates for the discovery of inducible promoters. Populus AOS homologs separate phylogenetically into two clades. Based on the 19 promoter motifs with significant abundance differences between …

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Pratylenchus Smoliki, A New Nematode Species (Pratylenchidae: Tylenchomorpha) From The Great Plains Region Of North America, Thomas Powers, Timothy Todd, Tim Harris, Rebecca Higgins, Ann Macguidwin, Peter Mullin, Mehmet Ozbayrak, Kirsten Powers, Kanan Sakai Jan 2021

Pratylenchus Smoliki, A New Nematode Species (Pratylenchidae: Tylenchomorpha) From The Great Plains Region Of North America, Thomas Powers, Timothy Todd, Tim Harris, Rebecca Higgins, Ann Macguidwin, Peter Mullin, Mehmet Ozbayrak, Kirsten Powers, Kanan Sakai

Department of Plant Pathology: Faculty Publications

Pratylenchus smoliki is a new species of root-lesion nematode described from corn-soybean production fields in the Central Great Plains of North America. It is characterized by populations with relatively abundant males, two lip annuli, females with a round functional spermatheca and a conoid to subcylindrical tail with a non-crenate, smooth terminus. In host preference tests, corn and wheat produce the largest nematode populations, whereas sorghum and soybeans produce less than 20% the numbers observed on corn. Scanning electron microscopy reveals that the en face patterns compare to those seen in Pratylenchus pseudocoffeae, P. scribneri, P. hexincisus, and …

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James B Beard: The Father Of Contemporary Turfgrass Science, G.K. Stahnke, P.E. Rieke, Robert C. Shearman, Roch E. Gaussoin, David Kopec Jan 2021

James B Beard: The Father Of Contemporary Turfgrass Science, G.K. Stahnke, P.E. Rieke, Robert C. Shearman, Roch E. Gaussoin, David Kopec

Department of Agronomy and Horticulture: Faculty Publications

James B Beard (24 Sept 1935 to 8 May 2018) can rightly be considered the “Father” of contemporary turfgrass science. During his career, he was known for setting a standard that provided the foundation for turfgrass science through his thorough approach to research, teaching, mentoring and communications. The books he published outlined a vision for an evolving scientific discipline. He trained and mentored >45 domestic and international doctoral and master students and numerous post-doctoral trainees, who in turn continued to raise the quality of contemporary turfgrass science in the USA and internationally. He led the effort to change the name …

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Remnant Assessment And Soil Inoculation To Inform Large-Scale Prairie Restoration At Eastern Washington University, Erik E. Peterson Jan 2021

Remnant Assessment And Soil Inoculation To Inform Large-Scale Prairie Restoration At Eastern Washington University, Erik E. Peterson

EWU Masters Thesis Collection

The Palouse Prairie of Eastern Washington and Western Idaho, characterized by rolling hills of deep loess soil, is one of the most endangered ecosystems in the world, with more than 99% converted to tilled farmland. To mitigate this loss, Eastern Washington University has begun prairie restoration on a tilled wheat field adjacent to campus, in the northern extent of the Palouse Prairie Ecoregion. However, effective restoration requires understanding reference conditions, and there are relatively few studies of remnant prairie plant communities or soils, particularly in the Northern Palouse. From north to south in the Palouse Prairie Ecoregion, there are gradients …

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Does Biochar Improve All Soil Ecosystem Services?, Humberto Blanco-Canqui Jan 2021

Does Biochar Improve All Soil Ecosystem Services?, Humberto Blanco-Canqui

Department of Agronomy and Horticulture: Faculty Publications

Biochar is considered to sequester C and deliver other soil ecosystem services, but an overview that synthesizes the current knowledge of biochar implications on all essential soil ecosystem services is difficult to find in the ample biochar literature. Most previous research and review articles on this topic focused on a single ecosystem service and did not integrate all essential soil ecosystem services. This overview paper (1) synthesizes the impacts of biochar on water and wind erosion, C sequestration, soil water, nutrient leaching, soil fertility, crop yields, and other soil ecosystem services based on published literature and (2) highlights remaining research …

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Representativeness Of Eddy-Covariance Flux Footprints For Areas Surrounding Ameriflux Sites, Housen Chu, Timothy Arkebauer, Dave P. Billesbach, Hideki Kobayashi, Thomas J. Kolbe, Gregory Starr, Andrew Suyker, 63 Other Coauthors Jan 2021

Representativeness Of Eddy-Covariance Flux Footprints For Areas Surrounding Ameriflux Sites, Housen Chu, Timothy Arkebauer, Dave P. Billesbach, Hideki Kobayashi, Thomas J. Kolbe, Gregory Starr, Andrew Suyker, 63 Other Coauthors

Department of Agronomy and Horticulture: Faculty Publications

Large datasets of greenhouse gas and energy surface-atmosphere fluxes measured with the eddy-covariance technique (e.g., FLUXNET2015, AmeriFlux BASE) are widely used to benchmark models and remote-sensing products. This study addresses one of the major challenges facing model-data integration: To what spatial extent do flux measurements taken at individual eddy-covariance sites reflect model- or satellite-based grid cells? We evaluate flux footprints—the temporally dynamic source areas that contribute to measured fluxes—and the representativeness of these footprints for target areas (e.g., within 250–3000 m radii around flux towers) that are often used in flux-data synthesis and modeling studies. We examine the land-cover composition …

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Guidelines For The Use And Interpretation Of Assays For Monitoring Autophagy (4th Edition), Daniel Klionsky, Rodrigo Franco, Guangchao Sun, Richard Wilson, More Than 2000 Coauthors Jan 2021

Guidelines For The Use And Interpretation Of Assays For Monitoring Autophagy (4th Edition), Daniel Klionsky, Rodrigo Franco, Guangchao Sun, Richard Wilson, More Than 2000 Coauthors

Department of Agronomy and Horticulture: Faculty Publications

In 2008, we published the first set of guidelines for standardizing research in autophagy. Since then, this topic has received increasing attention, and many scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Thus, it is important to formulate on a regular basis updated guidelines for monitoring autophagy in different organisms. Despite numerous reviews, there continues to be confusion regarding acceptable methods to evaluate autophagy, especially in multicellular eukaryotes. Here, we present a set of guidelines for investigators to select and interpret methods to examine autophagy and related processes, and for reviewers to …

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Stop Helping Pathogens: Engineering Plant Susceptibility Genes For Durable Resistance, Hernan Garcia-Ruiz, Boris Szurek, Guido Van Den Ackerveken Jan 2021

Stop Helping Pathogens: Engineering Plant Susceptibility Genes For Durable Resistance, Hernan Garcia-Ruiz, Boris Szurek, Guido Van Den Ackerveken

Department of Plant Pathology: Faculty Publications

Alternatives to protect crops against diseases are desperately needed to secure world food production and make agriculture more sustainable. Genetic resistance to pathogens utilized so far is mostly based on single dominant resistance genes that mediate specific recognition of invaders and that is often rapidly broken by pathogen variants. Perturbation of plant susceptibility (S) genes offers an alternative providing plants with recessive resistance that is proposed to be more durable. S genes enable the establishment of plant disease, and their inactivation provides opportunities for resistance breeding of crops. However, loss of S gene function can have pleiotropic effects. Developments in …

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Continuous In Situ Soil Nitrate Sensors: The Importance Of High-Resolution Measurements Across Time And A Comparison With Salt Extraction-Based Methods, Yunjiao Zhu, Yuncong Chen, Md. Azahar Ali, Liang Dong, Xinran Wang, Sotirios V. Archontoulis, James Schnable, Michael J. Castellano Jan 2021

Continuous In Situ Soil Nitrate Sensors: The Importance Of High-Resolution Measurements Across Time And A Comparison With Salt Extraction-Based Methods, Yunjiao Zhu, Yuncong Chen, Md. Azahar Ali, Liang Dong, Xinran Wang, Sotirios V. Archontoulis, James Schnable, Michael J. Castellano

Department of Agronomy and Horticulture: Faculty Publications

Soil NO3– affects microbial processes, plant productivity, and environmental N losses. However, the ability to measure soil NO3– is limited by labor-intensive sampling and laboratory analyses. Hence, temporal variation in soil solution NO3– concentration is poorly understood. We evaluated a new potentiometric sensor that continuously measures soil solution NO3– concentration with unprecedented specificity due to a novel membrane that serves as a barrier to interfering anions. First, we compared sensor and salt extraction-based measurements of soil NO3– in well-controlled laboratory conditions. Second, using 60 d of in situ soil NO …

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Nitrogen Response Functions Targeted To Technology Extrapolation Domains In Ethiopia Using Ceres-Maize, Feyera Merga Liben, Charles S. Wortmann, Haishun Yang, Tsegaue Tadesse, Z. P. Stewart, D. Wegary, W. Mupangwa Jan 2021

Nitrogen Response Functions Targeted To Technology Extrapolation Domains In Ethiopia Using Ceres-Maize, Feyera Merga Liben, Charles S. Wortmann, Haishun Yang, Tsegaue Tadesse, Z. P. Stewart, D. Wegary, W. Mupangwa

Department of Agronomy and Horticulture: Faculty Publications

The profitability of fertilizer-N use can be optimized using N response functions specific to climate-based technology extrapolation domains (TED). Crop growth simulation can complement field research for targeting of response functions. The objective of this study was to target maize (Zea mays L.) N response functions to seven TED in Ethiopia through CERES-Maize simulation of continuous maize over 30 yr. The complete factorial set of treatments included seven levels of N in 25 kg ha−1 increments under no-till (NT) and conventional tillage (CT) systems. The CERES-Maize simulated experiments were done for two or three sites per TED. Nitrogen …

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Abrasive Weeding As A Vehicle For Precision Fertilizer Management In Organic Vegetable Production, Tran Kim Ngan Luong, Frank Forcella, Sharon Clay, Michael S. Douglass, Samuel E. Wortman Jan 2021

Abrasive Weeding As A Vehicle For Precision Fertilizer Management In Organic Vegetable Production, Tran Kim Ngan Luong, Frank Forcella, Sharon Clay, Michael S. Douglass, Samuel E. Wortman

Department of Agronomy and Horticulture: Faculty Publications

Abrasive weeding is a nonchemical weed control tactic that uses small, gritty materials propelled with compressed air to destroy weed seedlings. Organic fertilizers have been used successfully as abrasive grits to control weeds, but the goal for this study was to explore the effects of fertilizer grit, application rates, and background soil fertility on weeds, plant available nitrogen (N) uptake, and crop yield. Field trials were conducted in organic ‘Carmen’ sweet red pepper (Capsicum annuum) and organic ‘Gypsy’ broccoli (Brassica oleracea var. italica) and treatments included organic fertilizer grit (8N–0.9P–3.3K vs. 3N–3.1P–3.3K), grit application rates (low …

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Collapse, Reorganization, And Regime Identity: Breaking Down Past Management Paradigms In A Forest-Grassland Ecotone, Victoria M. Donovan, Caleb P. Roberts, Carissa L. Wonkka, Daniel R. Uden, David G. Angeler, Craig R. Allen, David A. Wedin, Rhae A. Drijber, Dirac Twidwell Jan 2021

Collapse, Reorganization, And Regime Identity: Breaking Down Past Management Paradigms In A Forest-Grassland Ecotone, Victoria M. Donovan, Caleb P. Roberts, Carissa L. Wonkka, Daniel R. Uden, David G. Angeler, Craig R. Allen, David A. Wedin, Rhae A. Drijber, Dirac Twidwell

Department of Agronomy and Horticulture: Faculty Publications

The identity of an ecological regime is central to modern resilience theory and our understanding of how systems collapse and reorganize following disturbance. However, resilience-based models used in ecosystem management have been criticized for their failure to integrate disturbance outcomes into regime identity. Assessments are needed to understand how well these classifications represent ecosystem responses that occur over management relevant time scales. We tracked post-wildfire forest and grassland dynamics 27 years after wildfire in eastern ponderosa pine savanna. We tested for differences between the assigned identity of a site (forest or grassland) versus classifications based on the site's disturbance history …

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Wild Emmer Introgression Alters Root-To-Shoot Growth Dynamics In Durum Wheat In Response To Water Stress, Harel Bacher, Feiyu Zhu, Tian Gao, Kan Liu, Balpreet Dhatt, Tala Awada, Chi Zhang, Assaf Distelfeld, Hongfeng Yu, Zvi Peleg, Harkamal Walia Jan 2021

Wild Emmer Introgression Alters Root-To-Shoot Growth Dynamics In Durum Wheat In Response To Water Stress, Harel Bacher, Feiyu Zhu, Tian Gao, Kan Liu, Balpreet Dhatt, Tala Awada, Chi Zhang, Assaf Distelfeld, Hongfeng Yu, Zvi Peleg, Harkamal Walia

Department of Agronomy and Horticulture: Faculty Publications

Water deficit during the early vegetative growth stages of wheat (Triticum) can limit shoot growth and ultimately impact grain productivity. Introducing diversity in wheat cultivars to enhance the range of phenotypic responses to water limitations during vegetative growth can provide potential avenues for mitigating subsequent yield losses. We tested this hypothesis in an elite durum wheat background by introducing a series of introgressions from a wild emmer (Triticum turgidum ssp. dicoccoides) wheat. Wild emmer populations harbor rich phenotypic diversity for drought-adaptive traits. To determine the effect of these introgressions on vegetative growth under water-limited conditions, we used image-based phenotyping to …

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Seed-Shattering Phenology At Soybean Harvest Of Economically Important Weeds In Multiple Regions Of The United States. Part 1: Broadleaf Species, Lauren M. Schwartz-Lazaro, Lovreet S. Shergill, Jeffrey A. Evans, Muthukumar V. Bagavathiannan, Shawn C. Beam, Mandy D. Bish, Jason A. Bond, Kevin W. Bradley, William S. Curran, Adam S. Davis, Wesley J. Everman, Michael L. Flessner, Steven C. Haring, Nicholas R. Jordan, Nicholas E. Korres, John L. Lindquist, Jason K. Norsworthy, Tameka L. Sanders, Larry E. Steckel, Mark J. Vangessel, Blake Young, Steven B. Mirsky Jan 2021

Seed-Shattering Phenology At Soybean Harvest Of Economically Important Weeds In Multiple Regions Of The United States. Part 1: Broadleaf Species, Lauren M. Schwartz-Lazaro, Lovreet S. Shergill, Jeffrey A. Evans, Muthukumar V. Bagavathiannan, Shawn C. Beam, Mandy D. Bish, Jason A. Bond, Kevin W. Bradley, William S. Curran, Adam S. Davis, Wesley J. Everman, Michael L. Flessner, Steven C. Haring, Nicholas R. Jordan, Nicholas E. Korres, John L. Lindquist, Jason K. Norsworthy, Tameka L. Sanders, Larry E. Steckel, Mark J. Vangessel, Blake Young, Steven B. Mirsky

Department of Agronomy and Horticulture: Faculty Publications

Potential effectiveness of harvest weed seed control (HWSC) systems depends upon seed shatter of the target weed species at crop maturity, enabling its collection and processing at crop harvest. However, seed retention likely is influenced by agroecological and environmental factors. In 2016 and 2017, we assessed seed-shatter phenology in 13 economically important broadleaf weed species in soybean [Glycine max (L.) Merr.] from crop physiological maturity to 4 wk after physiological maturity at multiple sites spread across 14 states in the southern, northern, and mid-Atlantic United States. Greater proportions of seeds were retained by weeds in southern latitudes and shatter rate …

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Guiding Principles For Using Satellite-Derived Maps In Rangeland Management, Brady W. Allred, Megan K. Creutzburg, John C. Carlson, Christopher J. Cole, Colin M. Dovichin, Michael C. Duniway, Matthew O. Jones, Jeremy D. Maestas, David E. Naugle, Travis W. Naumen, Gregory S. Okin, Matthew C. Reeves, Matthew Rigge, Shannon L. Savage, Dirac Twidwell, Daniel R. Uden, Bo Zhou Jan 2021

Guiding Principles For Using Satellite-Derived Maps In Rangeland Management, Brady W. Allred, Megan K. Creutzburg, John C. Carlson, Christopher J. Cole, Colin M. Dovichin, Michael C. Duniway, Matthew O. Jones, Jeremy D. Maestas, David E. Naugle, Travis W. Naumen, Gregory S. Okin, Matthew C. Reeves, Matthew Rigge, Shannon L. Savage, Dirac Twidwell, Daniel R. Uden, Bo Zhou

Department of Agronomy and Horticulture: Faculty Publications

No abstract provided.

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Vision, Challenges And Opportunities For A Plant Cell Atlas, Plant Cell Atlas Consortium, Suryatapa Ghosh Jha, Marc Libault, David W. Ehrhardt, Seung Y. Rhee, 32 Other Scientists Jan 2021

Vision, Challenges And Opportunities For A Plant Cell Atlas, Plant Cell Atlas Consortium, Suryatapa Ghosh Jha, Marc Libault, David W. Ehrhardt, Seung Y. Rhee, 32 Other Scientists

Department of Agronomy and Horticulture: Faculty Publications

With growing populations and pressing environmental problems, future economies will be increasingly plant-based. Now is the time to reimagine plant science as a critical component of fundamental science, agriculture, environmental stewardship, energy, technology and healthcare. This effort requires a conceptual and technological framework to identify and map all cell types, and to comprehensively annotate the localization and organization of molecules at cellular and tissue levels. This framework, called the Plant Cell Atlas (PCA), will be critical for understanding and engineering plant development, physiology and environmental responses. A workshop was convened to discuss the purpose and utility of such an initiative, …

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Intervention Of Climate-Smart Practices In Wheat Under Rice-Wheat Cropping System In Nepal, Janma Jaya Gairhe, Mandeep Adhikari, Deepak Ghimire, Arun Khatri-Chhetri, Dinesh Panday Jan 2021

Intervention Of Climate-Smart Practices In Wheat Under Rice-Wheat Cropping System In Nepal, Janma Jaya Gairhe, Mandeep Adhikari, Deepak Ghimire, Arun Khatri-Chhetri, Dinesh Panday

Department of Agronomy and Horticulture: Faculty Publications

Besides a proper agronomic management followed by Nepalese farmers, wheat (Triticum aestivum L.) production has been severely affected by changing climate. There are many interventions, including climate-smart practices, to cope with this situation and possibly enhance crop and soil productivity. Field experiments were set up in a randomized complete block design with six treatments (TRT) with four replications in three locations (LOC) during wheat-growing seasons in Nepal from 2014 to 2016. Treatments included (i) Controlled Practice (CP), (ii) Improved Low (IL), (iii) Improved High (IH), (iv) Climate Smart Agriculture Low (CSAL), (v) Climate Smart Agriculture Medium (CSAM), and (vi) …

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Effect Of Foliar Micronutrients (B, Mn, Fe, Zn) On Maize Grain Yield, Micronutrient Recovery, Uptake, And Partitioning, Zachary P. Stewart, Ellen T. Paparozzi, Charles S. Wortmann, Prakash Kumar Jha, Charles A. Shapiro Jan 2021

Effect Of Foliar Micronutrients (B, Mn, Fe, Zn) On Maize Grain Yield, Micronutrient Recovery, Uptake, And Partitioning, Zachary P. Stewart, Ellen T. Paparozzi, Charles S. Wortmann, Prakash Kumar Jha, Charles A. Shapiro

Department of Agronomy and Horticulture: Faculty Publications

Timing of micronutrient demand and acquisition by maize (Zea Mays L.) is nutrient spe‐ cific and associated with key vegetative and reproductive growth stages. The objective of this study was to determine the fate of foliar‐applied B, Fe, Mn, Zn, and Fe/Zn together, evaluate the effect of foliar micronutrients applied at multiple rates and growth stages on maize grain yield, and deter‐ mine their apparent nutrient recovery efficiency (ANR). Five Randomized Complete Block Design (RCBD) experiments were conducted in 2014 and 2015 at five locations across Nebraska. Total dry matter was collected at 5–6 stages, and separated into leaves, stalk, …

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Genomic Resources In Plant Breeding For Sustainable Agriculture, Mahendar Thudi, Rajeev K. Varshney, James C. Schnable Jan 2021

Genomic Resources In Plant Breeding For Sustainable Agriculture, Mahendar Thudi, Rajeev K. Varshney, James C. Schnable

Department of Agronomy and Horticulture: Faculty Publications

Climate change during the last 40 years has had a serious impact on agriculture and threatens global food and nutritional security. From over half a million plant species, cereals and legumes are the most important for food and nutritional security. Although systematic plant breeding has a relatively short history, con- ventional breeding coupled with advances in technology and crop management strategies has increased crop yields by 56 % globally between 1965− 85, referred to as the Green Revolution. Nevertheless, increased demand for food, feed, fiber, and fuel necessitates the need to break existing yield barriers in many crop plants. In …

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Development Of Mping-Based Activation Tags For Crop Insertional Mutagenesis, Alexander Johnson, Edward Mcassey, Stephanie Diaz, Jacod Reagin, Priscilla S. Redd, Daymond R. Parrilla, Hanh Nguyen, Adrian Stec, Lauren A.L. Mcdaniel, Thomas E. Clemente, Robert M. Stupar, Wayne A. Parrott, C. Nathan Hancock Jan 2021

Development Of Mping-Based Activation Tags For Crop Insertional Mutagenesis, Alexander Johnson, Edward Mcassey, Stephanie Diaz, Jacod Reagin, Priscilla S. Redd, Daymond R. Parrilla, Hanh Nguyen, Adrian Stec, Lauren A.L. Mcdaniel, Thomas E. Clemente, Robert M. Stupar, Wayne A. Parrott, C. Nathan Hancock

Department of Agronomy and Horticulture: Faculty Publications

Modern plant breeding increasingly relies on genomic information to guide crop im- provement. Although some genes are characterized, additional tools are needed to effectively identify and characterize genes associated with crop traits. To address this need, the mPing element from rice was modified to serve as an activation tag to in- duce expression of nearby genes. Embedding promoter sequences in mPing resulted in a decrease in overall transposition rate; however, this effect was negated by using a hyperactive version of mPing called mmPing20. Transgenic soybean events carrying mPing-based activation tags and the appropriate transposase expression cassettes showed evidence of transposition. …

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Responses Of Soil Surface Greenhouse Gas Emissions To Nitrogen And Sulfur Fertilizer Rates To Brassica Carinata Grown As A Bio-Jet Fuel, Dwarika Bhattarai, Gandura O. Abagandura, Thandiwe Nleya, Sandeep Kumar Jan 2021

Responses Of Soil Surface Greenhouse Gas Emissions To Nitrogen And Sulfur Fertilizer Rates To Brassica Carinata Grown As A Bio-Jet Fuel, Dwarika Bhattarai, Gandura O. Abagandura, Thandiwe Nleya, Sandeep Kumar

Department of Agronomy and Horticulture: Faculty Publications

Carinata (Brassica carinata A. Braun), a non-food oilseed crop and an alternative bio-jet fuel feedstock, has received attention for its potential as a low-input option for production in the semi-arid region of the Northern Great Plains of the United States. Research addressing the impacts of nitrogen (N) and sulfur (S) fertilizers on soils and greenhouse gas (GHG; CO2, N2O, and CH4) emissions from carinata production are limited. Thus, objective of this study was to evaluate the impact of different rates of N and S fertilizers applied to carinata on soil properties and GHG emissions. Field experiments were conducted in 2017 …

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Household Smoke-Exposure Risks Associated With Cooking Fuels And Cooking Places In Tanzania: A Cross-Sectional Analysis Of Demographic And Health Survey Data, Mazbahul G. Ahamad, Fahian Tanin, Nawaraji Shrestha Jan 2021

Household Smoke-Exposure Risks Associated With Cooking Fuels And Cooking Places In Tanzania: A Cross-Sectional Analysis Of Demographic And Health Survey Data, Mazbahul G. Ahamad, Fahian Tanin, Nawaraji Shrestha

Department of Agronomy and Horticulture: Faculty Publications

Household smoke-exposure risk (SER) can be defined through the assessment of cooking fuels (smoke and no smoke-producing) and cooking places (indoor and outdoor) related information, which represent different levels of household air pollution. This study aimed to explore the prevalence and geographical variations in smoke-exposure risks (SERs) associated with indoor and outdoor cooking practices and use of smoke-producing and non-smoke-producing cooking fuels in Tanzania. We further investigated the social and spatial features associated with household SERs. We defined an indicator variable, the household SER, using country-level, cross-sectional data on cooking fuels and cooking places obtained from the 2015–2016 Tanzania Demographic …

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