Botany Commons^™

Floristic Quality Assessments Of Remnant Natural Areas In The Greater Grand Rapids, Michigan Region: Evaluating Botanical Change Since The 1890s, Alan W. Stockdale, Garrett Crow, David P. Warners

Faculty and Professional Research

In 1901, Emma J. Cole, a beloved high school teacher and distinguished botanist, published Grand Rapids Flora. Cole’s floristic inventory remains the most comprehensive botanical study of the greater Grand Rapids, Michigan region, even though this area has experienced significant land- scape alterations since her publication. To address this knowledge gap, in 2014 we embarked on a multiple-year project aimed to discover and reassess the sites Cole described, as well as to catalog other natural remnant locations within the Grand Rapids area. This paper reports botanical invento- ries that were completed at eight sites within Kent County during 2015 and …

A New Subspecies Of Saxifraga Artvinensis V.A.Matthews (Saxifragaceae) From Northeastern Anatolia, Sali̇h Terzi̇oğlu, Kami̇l Çoşkunçelebi̇, Murat Erdem Güzel

Turkish Journal of Botany

Saxifraga artvinensis V.A.Matthews, which is endemic to Turkey, was discovered on Tiryal Mountain (A8 Artvin, northeastern Turkey). Approximately 175 km from its type locality, a new population of the species was discovered, in the Picea orientalis forest in the Altındere Valley National Park, in A7 Trabzon (northeastern Turkey). A comparison with the known population of S. artvinensis confirmed that this new population represented a new taxon and is described as S. artvinensis subsp. meryemii Terzioğlu & Coşkunç. An identification key and comparison with closely related taxa, based on both morphological and molecular properties, are also provided. The studied samples, belonging …

Tricholoma (Fr.) Staude In The Aegean Region Of Turkey, İsmai̇l Şen, Hakan Alli

Turkish Journal of Botany

The Tricholoma biodiversity of the Aegean region of Turkey has been determined and reported in this study. As a consequence of field and laboratory studies, 31 Tricholoma species have been identified, and five of them (T. filamentosum, T. frondosae, T. quercetorum, T. rufenum, and T. sudum) have been reported for the first time from Turkey. The identification key of the determined taxa is given with this study.

New Additions To Turkish Pezizales From The Eastern Black Sea Region, Yasi̇n Uzun, Abdullah Kaya

Turkish Journal of Botany

Ten members of the order Pezizales J.Schröt., namely Pachyella clypeata (Schwein.) Le Gal, Terfezia cistophila Ant. Rodr., Bordallo, Kaounas & A.Morte (Pezizaceae), Genea hispidula Berk. ex Tul. & C.Tul., Lamprospora campylopodis W.D.Buckley, Lamprospora tuberculatella Seaver, Octospora grimmiae Dennis & Itzerott, Octospora lilacina (Seaver) Svr?ek & Kubi?ka, Pulvinula convexella (P.Karst.) Pfister, Ramsbottomia crechqueraultii (P.Crouan & H.Crouan) Benkert & T.Schumach., and Trichophaea gregaria (Rehm) Boud. (Pyronemataceae), are recorded for the first time from Turkey. Brief descriptions and photographs of the taxa are provided.

Assessing Impacts Of Climate Change On Campanula Yaltirikii H.Duman (Campanulaceae), A Critically Endangered Endemic Species In Turkey, Canan Dülgeroğlu, Ahmet Aksoy

Turkish Journal of Botany

Ecological niche models (ENMs) provide information to assess the effects of environmental and climatic conditions on species distribution. The purpose of this study was to predict the impact of climate change on a critically endangered species, Campanula yaltirikii H.Duman. It is a local endemic chasmophyte from Mt Çığlıkara (Antalya, Turkey), restricted to cracks in calcareous rocks and threatened by goat overgrazing. Current and future ENMs of C. yaltirikii were predicted with a maximum entropy (Maxent) algorithm. The MIROC5 (Model for Interdisciplinary Research on Climate) climate change scenario for the year 2070 was used for projecting the future ENM of the …

Epiphytic Diatoms As Bioindicators Of Trophic Status Of Lake Modrac(Bosnia And Herzegovina), Jasmina Kamberovi?, Vedran Stuhli, Zorana Luki?, Mirela Habibovic, Emina Me?Iki?

Turkish Journal of Botany

Biodiversity of diatoms and applicability of diatom indices in biomonitoring based on littoral epiphytic samples of Lake Modrac were investigated. Diatoms were taken mostly from Phragmites australis stems in 2017, during which physical and chemical parameters of the water were measured. A total of 85 diatom taxa were identified. Gomphonema (13 spp.), Navicula (11 spp.), and Nitzschia (8 spp.) were the most abundant genera. Obtained values of trophic indices (TID, TvD, and TDIL) pointed to meso- to eutrophic status for most localities, while values of the IBD, EPI, ?D, and IPS indices indicated good ecological status, except for localities at …

Morphological, Chemical, And Genetic Diversity Of Gypsophila L. (Caryophyllaceae) Species And Their Potential Use In The Pharmaceutical Industry, Barbara Kolodziej, Sylwia Okon, Aleksandra Nucia, Tomasz Ociepa, Katarzyna Luchowska, Danuta Sugier, Reneta Gevrenova, Max Henry

Turkish Journal of Botany

The aim of this study was to evaluate the morphological, chemical, and genetic similarity of species belonging to the genus Gypsophila L. The analysis included 7 Gypsophila species with potential use in the pharmaceutical industry for saponin production. In order to assess the variation of the morphological traits, a number of morphological characteristics have been determined (including the number of lateral roots, diameter and total root length, average plant height, number of shoots and their diameter, number of branches on the shoot, length and width of leaves, and fresh and air-dried weight of aerial and underground parts of plants), while …

New Additions To The Turkish Pezizales, Yasi̇n Uzun, Semi̇ha Yakar, İbrahi̇m Hali̇l Karacan, Abdullah Kaya

Turkish Journal of Botany

Twelve members of the order Pezizales are recorded for the first time from Turkey: Ascobolus carbonarius P.Karst.; A. crenulatus P.Karst.; A. foliicola Berk. & Broome; A. immersus Pers.; Saccobolus glaber (Pers.) Lambotte; Thecotheus holmskioldii (E.C.Hansen) Eckblad (Ascobolaceae Boud. ex Sacc.); Lasiobolus cuniculi Velen. (Ascodesmidaceae J.Schröt.); Barssia hellenica Kaounas, Agnello, P.Alvarado & Slavova (Helvellaceae Fr.); Marcelleina atroviolacea Brumm.; M. rickii (Rehm) Graddon (Pezizaceae Dumort.); Cheilymenia pulcherrima (P.Crouan & H.Crouan) Boud.; and Sepultariella semi-immersa (P.Karst.) Van Vooren, U.Lindem. & Healy (Pyronemataceae Corda). Three of them, S. glaber (Pers.) Lambotte; B. hellenica Kaounas, Agnello, P.Alvarado & Slavova; and S. semi-immersa (P.Karst.) Svrcek, are …

New Contributions To The Turkish Ascomycota, Abdullah Kaya, Yasi̇n Uzun

Turkish Journal of Botany

Nine discomycete and one sordariomycete (Ascomycota) species are reported for the first time from Turkey. The genera Coccomyces, Kompsoscypha, Pseudopithyella, Strobiloscypha, and Lasiosphaeris have not been reported before in the country. Anthracobia, Plicaria, Sclerotinia, and Pithya species are new records added to the previous knowledge. Macro- and micromorphological descriptions and illustrations for each new taxon are provided.

Notes On The Genus Frondaria (Orchidaceae) With Description Of New Species, Dariusz Szlachetko, Marta Kolanowska, Max Rykaczewski

Turkish Journal of Botany

The specific diversity of Neotropical orchid genus Frondaria is evaluated based on morphological data. Frondaria was considered a monospecific taxon for years; however, our recent studies on Andean orchids indicated that it is actually much more variable. Within Colombian material, we found a species which does not fit the morphological description of F. caulescens and described it here as a new species named F. colombiana . The novelty is characterized by inflorescence being three times as long as the ramicaul, the tridentate leaf apex with middle tooth as long as lateral ones, papillate apices of sepals, and oblong-ligulate lip middle …

New Species And New Records Of Lichenized Ascomycota From Tropicaldeciduous Forests Of The Western Ghats Biodiversity Hotspot, India, Sumesh Dudani, Sanjeeva Nayaka, Komal Ingle, Siljo Joseph

Turkish Journal of Botany

Stirtonia ghattensis Sumesh N. Dudani, Nayaka, Komal K. Ingle & S. Joseph sp. nov. having UV+ white thallus, 4-6-spored asci, and 5(-7)-septate ascospores and lacking lichen substances is described as new to science. Pertusaria mesotropa Müll. Arg. is reported for the first time from India. Bacidia subannexa (Nyl.) Zahlbr., Graphis caesiella Vain., G. handelii Zahlbr., Hemithecium scariosum Makhija & Adaw., and Pertusaria coccodes (Ach.) Nyl. are new records for Western Ghats. Arthothelium aphanocarpum (Nyl.) Zahlbr., which had a restricted distribution in the Andaman Islands, is collected from the mainland of India for the first time. An updated world key for …

Lichen Conservation In Eastern North America: Population Genomics, Climate Change, And Translocations, Jessica Allen

Dissertations, Theses, and Capstone Projects

Conservation biology is a scientific discipline that draws on methods from diverse fields to address specific conservation concerns and inform conservation actions. This field is overwhelmingly focused on charismatic animals and vascular plants, often ignoring other diverse and ecologically important groups. This trend is slowly changing in some ways; for example, increasing number of fungal species are being added to the IUCN Red-List. However, a strong taxonomic bias still exists. Here I contribute four research chapters to further the conservation of lichens, one group of frequently overlooked organisms. I address specific conservation concerns in eastern North America using modern methods. …

An On-Campus Botanical Tour To Promote Student Satisfaction And Learning In A University Level Biodiversity Or General Biology Course, Harish H. Ratnayaka

Faculty and Staff Publications

Outdoor, hands-on and experiential learning, as opposed to instruction-based learning in classroom, increases student satisfaction and motivation leading to a deeper understanding of the subject. However, the use of outdoor exercises in undergraduate biology courses is declining due to a variety of constraints. Thus, the goal of this paper is to describe a convenient, no-cost and flexible exercise using an on-campus botanical tour for strengthening specific knowledge areas of major plant groups. Its assessment on conduct and coverage, and student-perceived and actual knowledge gain is also described. Data presented derived from traditional biology undergraduates in sophomore year over nine fall …

Political Ecology Of Medicinal Plant Use In Rural Nepal: Globalization, Environmental Degradation, And Cultural Transformation, Emily Dovydaitis

Honors Undergraduate Theses

Prior to the advent of biomedicine, rural communities in Nepal relied on phytochemically active compounds in medicinal plants as their primary source of medicine; however, ethnobotanical practices have shifted over time due to economic, environmental, and sociocultural stimuli. Findings from 2016 fieldwork conducted in Dumrikharka, Nepal and Tutung, Nepal are compared to existing literature to describe the political ecology of medicinal plants in rural Nepal.

Anthropogenic climate change threatens individual plant species and ecosystem biodiversity. Globalized markets unabated by weak conservation programs place increasing demands on medicinal plants. As indigenous plants become overharvested and more difficult to access, Nepalis incorporate …

Diversity And Evolution Of Fruits In Cuscuta (Dodders; Convolvulaceae), Anna Ho

Theses and Dissertations (Comprehensive)

Cuscuta (dodder) is a genus of roughly 200 species of obligate stem parasites with sub-cosmopolitan distribution. The fruit, generally regarded as a capsule, has a thin pericarp containing one to four seeds and opening at the base (circumscissile dehiscence; DE), or remaining closed (indehiscent; IN). IN has evolved multiple times in Cuscuta from DE, and is most common in the North American clades of subgenus Grammica. In addition, some species produce fruits that open irregularly. Characteristics pertaining to the fruits of Cuscuta are important as their seeds contribute most to their distribution and prevalence across the globe, and their reduced …

Contributions To Turkish Pyronemataceae From Gaziantep Province, Abdullah Kaya, Yasi̇n Uzun, İbrahi̇m Hali̇l Karacan, Semi̇ha Yakar

Turkish Journal of Botany

Fourteen pyronemataceous macrofungi taxa (Aleuria exigua Rifai; Cheilymenia catenipila J. Moravec; Cheilymenia vitellina (Pers.) Dennis; Geopyxis majalis (Fr.) Sacc.; Geopyxis vulcanalis (Peck) Sacc.; Humaria aurantia (Clem.) Häffner, Benkert and Krisai; Kotlabaea deformis (P. Karst.) Svrcek; Pulvinula johannis Lantieri; Pyronema domesticum (Sowerby) Sacc.; Scutellinia trechispora (Berk. and Broome) Lambotte; Smardaea planchonis (Dunal ex Boud.) Korf and W.Y. Zhuang; Tricharina ochroleuca (Bres.) Eckblad; Tricharina praecox (P. Karst.) Dennis; and Trichophaeopsis bicuspis (Boud.) Korf and Erb) are given as new records for the mycobiota of Turkey from Gaziantep Province. Three of them are the first members of the genera Kotlabaea Svrcek, Smardaea Svrcek, …

New Or Additional Cladoniicolous Fungi For Turkey, Mustafa Kocakaya, Mehmet Gökhan Halici, Raquel Pino Bodas

Turkish Journal of Botany

This study reports twelve species of cladoniicolous fungi from Turkey. Nine of these taxa, i.e. Abrothallus cladoniae R.Sant. And D.Hawksw., Epicladonia stenospora (Harm.) D.Hawksw., Lichenosticta alcicornaria (Linds.) D.Hawksw., Lichenoconium aeruginosum Diederich, M.Brand, van den Boom and Lawrey, Phoma foliaceiphila Diederich, Kocourk. And Etayo, Scutula cladoniicola Alstrup and D.Hawksw., Sphaerellothecium cladoniicola E.S. Hansen and Alstrup, Syzygospora bachmannii Diederich and M.S.Christ., and Taeniolella beschiana Diederich, are new records for Turkey. A key to these 12 species of lichenicolous fungi on Cladonia species is provided.

Haematococcus: A Successful Air-Dispersed Colonist In Ephemeral Waters Is Rarely Found In Phytoplankton Communities, Savvas Genitsaris, Natasa Stefanidou, Matina Katsiapi, Elisabeth Vardaka, Konstantinos Ar. Kormas, Ulrich Sommer, Maria Moustaka-Gouni

Turkish Journal of Botany

In a literature search, the presence of Haematococcus in phytoplankton communities and its biogeography were investigated. Haematococcus, although showing a wide biogeographical distribution, has been rarely found in phytoplankton communities. Simultaneously, the colonization potential of air-dispersed Haematococcus in ephemeral waters and its interactions with coexisting phytoplankton taxa were examined by microscopy and molecular methods. Haematococcus was a successful colonist, appearing among the first taxa in the experimental containers. According to principal component analysis, Haematococcus growth rate was negatively correlated with the abundance and species richness of the other autotrophs. Furthermore, a negative correlation between Haematococcus and Chlamydomonas and a positive …

Expanding The Understanding Of A Forest Ectomycorrhizal Community By Combining Root Tips And Fruiting Bodies: A Case Study Of Tuber Magnatum Stands, Giorgio Lalli, Marco Leonardi, Marilena Oddis, Giovanni Pacioni, Elena Salerni, Mirco Iotti, Alessandra Zambonelli

Turkish Journal of Botany

A survey of both ectomycorrhizal (ECM) root tips and fruiting bodies of ECM fungi was carried out during a four-year period (2009-2012) in two similar forest stands in central Italy, previously investigated in detail being habitats of the Italian white truffle Tuber magnatum Pico. This research is one of the few conducted in mixed forest stands and, for the first time, it took into account the cryptic fungi (corticiaceous, hypogeous, and sclerotia). This survey led to an exhaustive description of the ECM community by integrating all the 197 taxa recorded (147 species as fruiting bodies, 65 as ectomycorrhizas, and 15 …

Six New Genus Records For Turkish Pezizales From Gaziantep Province, Abdullah Kaya, Yasi̇n Uzun

Turkish Journal of Botany

The genera Hypotarzetta Donadini, Pseudombrophila Boud., Pustularia Bonord., Pyronema Carus, Tricharina Eckblad (Pyronemataceae Corda), and Thecotheus Boud. (Ascobolaceae Boud. Ex Sacc.) are recorded from Turkey for the first time based on the collections of Hypotarzetta insignis (Berthet and Riousset) Donadini, Pseudombrophila merdaria (Fr.) Brumm., Pustularia patavina (Cooke and Sacc.) Boud., Pyronema omphalodes (Bull.: Fr.) Fuckel, Tricharina gilva (Boud. Ex Cooke) Eckblad, and Thecotheus pelletieri (P. Crouan and H. Crouan) Boud., respectively. Short descriptions and photographs of the taxa related to their macro- and micromorphologies are provided.

Contributions To The Macrofungal Diversity Of Atatürk Dam Lake Basin, Abdullah Kaya

Turkish Journal of Botany

This study was carried out on macrofungi samples collected from Atatürk Dam Lake basin, especially from the southern coasts, within the boundaries of Şanlıurfa province between 2003 and 2013. A total of 122 taxa belonging to 38 families were identified. Six of them are new for the mycobiota of Turkey. Sowerbyella rhenana (Fuckel) J. Moravec is new at the genus level, while Peziza pseudoviolacea Donadini, Peziza ripensis E.C. Hansen, Cheilymenia theleboloides (Alb. & Schwein.) Boud., Galeropsis desertorum Velen. & Dvorak, and Tulostoma melanocyclum Bres. are new at species level.

Assessment Of Species Diversity And State Of Stipa Tenacissima Steppes, Wahida Ghiloufi, Jose Luis Quero Perez, Miguel Garcia Gomez, Mohamed Chaieb

Turkish Journal of Botany

North African steppes are subjected to extreme degradation resulting in the reduction of their surface, genetic erosion of resources, and decrease in biodiversity. Stipa tenacissima steppes, which constitute one of the most representative vegetation types in the driest areas of the Mediterranean basin, are continuously degrading. With the aim of contributing to a better knowledge of the floristic composition and diagnosing the state of degradation of these steppes, we conducted a phytoecological analysis of 10 S. tenacissima sites in Tunisia. Floristic inventory compiled a systematic list of 46 vascular plant species belonging to 43 genera and 26 families. Species richness …

New Records For Turkey And Contributions To The Macrofungal Diversity Of Isparta Province, Hali̇l Güngör, Mehmet Hali̇l Solak, Hakan Alli, Mustafa Işiloğlu, Erbi̇l Kalmiş

Turkish Journal of Botany

This study was conducted on specimens of macrofungi collected from Isparta Province between 2005 and 2008; in addition, Trichophaea woolhopeia (Cooke and W. Phillips) Boud. İs given as a new record from Muğla Province. After fieldwork and laboratory studies, 129 taxa belonging to 36 families and 2 divisions were identified from Isparta Province. Five of them, Cortinarius olidus J.E. Lange, Cystoderma jasonis (Cooke and Massee) Harmaja, Echinoderma echinaceum (J.E. Lange) Bon, Hebeloma gigaspermum Gröger and Zschiesch., and Psathyrella canoceps (Kauffman) A.H. Sm., are new records for Turkey.

Taxonomic Studies On Some New Fungal Records From Trabzon, Turkey, Ertuğrul Sesli̇, Pierre-Arthur Moreau

Turkish Journal of Botany

Basidiomes of Alnicola subconspersa (Kühner ex P.D. Orton) Bon, Amanita pachyvolvata (Bon) Krieglst., Cortinarius azureus Fr., Cortinarius vernus H. Lindstr. And Melot, Melanogaster variegatus (Vittad.) Tul. And C. Tul., Paxillus ammoniavirescens Contu and Dessì, and Paxillus cuprinus P. Jargeat, H. Gryta, J.P. Chaumeton and A. Vizzini were reported for the first time for the Turkish mycota from Trabzon. Plant species, possible mycorrhizal relationships, and superficial morphologic structures were noted and photos were taken in situ in the collection area. The samples were brought to the laboratory and dried for future microscopic studies. Basidiospores, cystidia, basidia, marginal cells, and pileipellis of …

The Relationship Between Riparian Zone Width And Floristic Quality In Shenandoah County, Virginia, Jamie D. Smith

Masters Theses, 2010-2019

Riparian zones harbor an above average plant biodiversity. This biodiversity is threatened by invasive species and increasing human disturbance, the latter of which includes deforestation from agriculture and urban development. In this study, I examine relationship between the width of a forested riparian zone and the vegetation growing there. By using floristic quality assessment as a measure of anthropogenic disturbance, one can determine if wider riparian zones foster exclusion of non-native species while providing higher quality habitats for native plants. A randomized block design was used with three forested riparian treatments: deforested, moderately forested (woody vegetationstream), and extensively forested (woody …

The Significance Of Micro-Prairie Reconstruction In Urban Environments, Bruno Borsari, Neal Mundahl, Malcom F. Vidrine, Marc Pastorek

The Prairie Naturalist

An aggressive urban sprawl during the last half century has not only contributed to habitat disturbance and extirpation, as well as a loss of knowledge and appreciation for biodiversity. Across the United States, prairie reconstruction has been a very effective approach for developing sustainable landscape designs in city parks and other open spaces. The purpose of this work is to focus on restoration and reconstruction of selected micro-prairies as a vehicle for enhanced place-based education and to partially remediate the consequences of global climate change and loss of pollinators. From the coastal prairies of southwestern Louisiana, to the eastern edge …

Lichenized And Lichenicolous Fungi Of Gevne Valley (Konya, Antalya), Mustafa Kocakaya, Mehmet Gökhan Halici, Ahmet Aksoy

Turkish Journal of Botany

The lichen and lichenicolous fungi of Gevne Valley in the provinces of Konya and Antalya are presented. From 47 localities, 215 lichen and 18 lichenicolous fungi are reported for a total 233 infrageneric taxa. Four taxa are new records for Turkey: Lecanora flowersiana H.Magn., L. invadens H.Magn., Psora cerebriformis W.A.Weber, and Rinodina colobinoides (Nyl.) Zahlbr. Detailed information on these 4 taxa is provided along with photographs.

Macromycetes Determined In Yomra (Trabzon) District, Ilgaz Akata, Yasi̇n Uzun, Abdullah Kaya

Turkish Journal of Botany

This study was carried out on macrofungi samples collected from Yomra district during 2007-2012, and 236 taxa belonging to 58 families were identified. Crocicreas cyathoideum (Bull.) S.E.Carp., Phaeohelotium fagineum (Pers.) Hengstm., and Dacrymyces chrysospermus Berk. & M.A.Curtis are recorded for the first time from Turkey. Calyptella capula (Holmsk.) Quél., Campanella caesia Romagn., and Guepiniopsis buccina (Pers.) L.L.Kenn. are the first members of the genera Calyptella Quél., Campanella Henn., and Guepiniopsis Pat. respectively, in Turkey.

Contributions To The Macrofungal Diversity Of Kilis Province, Mehmet Hali̇l Solak, Hakan Alli, Mustafa Işiloğlu, Hali̇l Güngör, Erbi̇l Kalmiş

Turkish Journal of Botany

In this study, an attempt has been made to determine macrofungal specimens collected from Kilis in 2006 and 2007. After field and laboratory studies, 47 taxa belonging to 17 families and 2 divisions were identified: 4 taxa belong to Ascomycota and 43 to Basidiomycota. Three of them, Inocybe taxocystis (J.Favre & E.Horak) Senn-Irlet, Russula laccata Huijsman, and Russula medullata Romagn., are new records for Turkey.

Contributions To The Macrofungal Diversity Of Antalya Province, Mehmet Hali̇l Solak, Hakan Alli, Mustafa Işiloğlu, Hali̇l Güngör, Erbi̇l Kalmiş

Turkish Journal of Botany

In this study, an attempt has been made to establish macrofungal specimens collected from Antalya between 2005 and 2009. After field and laboratory studies, 136 taxa belonging to 40 families and 2 divisions were identified. Twenty taxa belong to Ascomycota and 116 to Basidiomycota. Three of them, Cortinarius subferrugineus (Batsch) Fr., Entoloma vernum Lundell, and Inocybe piceae Stangl & Schwöbel, are new records for Turkey.