Botany Commons^™

Rare, Threatened And Endangered Non-Vascular Plants, Lichen, And Fungi Species Of Oregon (2023), Michael Russell, Sue Vrilakas, Lindsey K. Wise, Gabriel E. Campbell

Institute for Natural Resources Publications

The Oregon Biodiversity Information Center (ORBIC) is part of the Institute for Natural Resources (INR) located at Portland State University (PSU). ORBIC maintains extensive databases of Oregon biodiversity, concentrating on rare and endangered plants, animals and ecosystems. Since its creation in 1979 as the Oregon Natural Heritage Program, ORBIC has been part of the Natural Heritage network. ORBIC is a constituent member of NatureServe, a non-profit organization with a mission to provide the scientific basis for effective conservation action. NatureServe and Oregon manage data using standards and protocols used across the U.S., Canada, and much of Latin America.

ORBIC has …

Rare, Threatened And Endangered Vascular Plant Species Of Oregon (2023), Sue Vrilakas, Lindsey K. Wise, Gabriel E. Campbell, Michael Russell

Institute for Natural Resources Publications

The Oregon Biodiversity Information Center (ORBIC) is part of the Institute for Natural Resources (INR) located at Portland State University (PSU). ORBIC maintains extensive databases of Oregon biodiversity, concentrating on rare and endangered plants, animals and ecosystems. Since its creation in 1979 as the Oregon Natural Heritage Program, ORBIC has been part of the Natural Heritage network. ORBIC is a constituent member of NatureServe, a non-profit organization with a mission to provide the scientific basis for effective conservation action. NatureServe and Oregon manage data using standards and protocols used across the U.S., Canada, and much of Latin America.

ORBIC has …

Screening Spring Wheat Genotypes For Tadreb-B1 And Fehw3 Genes Under Severe Drought Stress At The Germination Stage Using Kasp Technology, Elsayed A. Elsayed, Asmaa A. M. Ahmed, Matías Schierenbeck, Schierenbeck Y. Hussein, P. Stephen Baenziger, Andreas Börner, Ahmed Sallam

Department of Agronomy and Horticulture: Faculty Publications

Drought stress is a major yield-limiting factor throughout the world in wheat (Triticum aestivum L.), causing losses of up to 80% of the total yield. The identification of factors affecting drought stress tolerance in the seedling stage is especially important to increase adaptation and accelerate the grain yield potential. In the current study, 41 spring wheat genotypes were tested for their tolerance to drought at the germination stage under two different polyethylene glycol concentrations (PEG) of 25% and 30%. For this purpose, twenty seedlings from each genotype were evaluated in triplicate with a randomized complete block design (RCBD) in …

Long-Term Manure Application Improves Soil Health And Stabilizes Carbon In Continuous Maize Production System, Saurav Das, Daniel Liptzin, Bijesh Maharjan

Department of Agronomy and Horticulture: Faculty Publications

Soil health lies at the core of a sustainable food production system. A comprehensive evaluation of different agronomic practices and their effect on soil health is essential to determine the best practices that support soil ecosystem services. However, it may take years or decades to observe measurable changes in soil health under varying management practices. The objective of this experiment was to evaluate the effects of long-term (>77 years) manure and inorganic nitrogen (N) fertilizer on soil health and determine the interrelationship among the measured soil bio-physicochemical indicators. The study also aims to understand the sustainability of the monocropping …

Simulated Impacts Of Winter Rye Cover Crop On Continuous Corn Yield And Soil Parameters, Girma Birr, Andualem S. Shiferaw, Tsegaye Tadesse, Marty R. Schmer, Virginia L. Jin, Brian D. Wardlow, Katja Koehler-Cole, Tala Awada, Sarah Beebout, Teferi Tsegaye, Tulsi Kahrel

Department of Agronomy and Horticulture: Faculty Publications

Cover crops (CC) provide numerous ecosystem services such as improving soil health, reducing nutrient loss, increasing productivity, and mitigating greenhouse gas emission. However, adoption of CC has been hindered by perceived negative impacts on main crop productivity and additional production costs. This is partly attributed to the gap in current state of knowledge in CC and its interaction with main crop production under different biophysical conditions. In this study, Decision Support System for Agrotechnology Transfer model was used to evaluate the long-term impact of cereal rye (Secale cereale L.) on corn (Zea mays L.) yield, soil organic carbon …

On Correlation Between Canopy Vegetation And Growth Indexes Of Maize Varieties With Different Nitrogen Efficiencies, Xia Zhao, Shuaili Wang, Tao Wen, Jiamin Xu, Bao Huang, Shufeng Yan, Gangqiang Gao, Yali Zhao, Hongping Li, Jiangfang Qiao, Jinliang Yang, Lianhai Wu, Hongwei Wang, Tianxue Liu, Xinyuan Mu

Department of Agronomy and Horticulture: Faculty Publications

Studying the canopy spectral reflection characteristics of different N-efficient maize varieties and analyzing the relationship between their growth indicators and spectral vegetation indices can help the breeding and application of N-efficient maize varieties. To achieve the optimal management of N fertilizer resources, developing N-efficient maize varieties is necessary. In this research, maize varieties, i.e., the low-N-efficient (Zhengdan 958, ZD958), the high-N efficient (Xianyu 335, XY335), the double-high varieties (Qiule 368, QL368), and the double inefficient-type varieties (Yudan 606 YD606), were used as materials. Results indicate that nitrogen fertilization significantly increased the vegetation indices NDVI, GNDVI, GOSAVI, and RVI of maize …

Editorial: Genetic Validation And Its Role In Crop Improvement, Ahmed Sallam, Ahmad M. Alqudah, P. Stephen Baenziger, Awais Rasheed

Department of Agronomy and Horticulture: Faculty Publications

Gene discovery for economically important traits has remained a challenging Frontier in crop genomics and breeding. The recent advances in DNA sequencing technologies and genetic analysis approaches paved the way for discovering many genes and hotspot genomic regions controlling target traits. The detection of novel genomic regions or candidate genes is very useful for plant breeders and geneticists to improve crops, dissect the genetics of complex traits, and understand the biological mechanisms of genes underpinning traits of interest. Quantitative trait loci (QTL) mapping and genome-wide association studies (GWAS) dominated recent crop gene discovery research. These studies are becoming routine activities …

The Intertwining Of Zn-Finger Motifs And Abiotic Stress Tolerance In Plants: Current Status And Future Prospects, Debojyoti Moulick, Karma Landup Bhutia, Sukamal Sarkar, Anirban Roy, Udit Nandan Mishra, Biswajit Pramanick, Sagar Maitra, Tanmoy Shankar, Swati Hazra, Milan Skalicky, Marian Brestic, Viliam Barek, Akbar Hossain

Department of Agronomy and Horticulture: Faculty Publications

Environmental stresses such as drought, high salinity, and low temperature can adversely modulate the field crop’s ability by altering the morphological, physiological, and biochemical processes of the plants. It is estimated that about 50% + of the productivity of several crops is limited due to various types of abiotic stresses either presence alone or in combination (s). However, there are two ways plants can survive against these abiotic stresses; a) through management practices and b) through adaptive mechanisms to tolerate plants. These adaptive mechanisms of tolerant plants are mostly linked to their signalling transduction pathway, triggering the action of plant …

The Effects Of Trailside/Non-Trailside Sample Collection And Tree Communities On Biodiversity Of Mushroom-Forming Fungi In Public Green Spaces Of New London, Connecticut, Quincy Dowling

Botany Honors Papers

The Kingdom Fungi holds a wealth of biodiversity and potential for better supporting both natural and human communities (Lange, 2014). Mushroom-forming fungi have potential value as sustainable and accessible sources of food in public green spaces (Rombach & Dean, 2023). The purpose of this investigation was to examine the effect of trailside disturbance and tree communities on the diversity and community composition of mushroom-forming fungi in New London, Connecticut. Six public green spaces were identified and surveyed for species richness of mushroom-forming fungi. At each site, two foraging areas of equal area were defined: one along either side of a …

The Yucca Auxin Biosynthetic Genes And Drought: How Does Gene Expression Change In Water Stressed Leaves?, Samantha Pelletier

Botany Honors Papers

As drought becomes more pronounced due to climate change, it is important to characterize the responses of plants to water stress. One area of interest includes how auxin, the hormone most associated with growth and development, is affected by drought. In particular, the final size of an expanding leaf is often reduced in response to drought and auxin is known to play a key role in leaf expansion. The YUCCA proteins catalyze the conversion of indole-3-pyruvic acid to indole-3-acetic acid (IAA), the dominant form of auxin in most plants, and most of this IAA is produced in rapidly expanding leaves. …

Dedication

Aliso: A Journal of Systematic and Floristic Botany

No abstract provided.

A Tribute To Gary D. Wallace

Aliso: A Journal of Systematic and Floristic Botany

No abstract provided.

A Vascular Flora Of The South Fork Tule River, Southern Sierra Nevada, Tulare County, California, Jessica M. Orozco

Aliso: A Journal of Systematic and Floristic Botany

I conducted a floristic study of the South Fork Tule River watershed, located in the southern Sierra Nevada in Tulare County, California. The primary objectives of this floristic study were to document and catalogue all vascular plant taxa that occur in the watershed, describe the plant communities, analyze the flora and its affinities with other areas, and establish a herbarium for the Tule River Indian Reservation. The upper reaches of the South Fork Tule River originate on the western slope of Slate Mountain in the Sequoia National Forest and drain west through the Tule River Indian Reservation into Lake Success. …

Letter From The Faculty Editor, Beth Kegley

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Woody Ornamental Disease Management Research Reports 2023, Fulya Baysal-Gurel

Extension Publications

No abstract provided.

A Vascular Flora Of The Nopah Range, Inyo County, California, Carolyn J. Mills

CGU Theses & Dissertations

The Nopah Range is an arid mountain range of the northern Mojave Desert located just east of Death Valley National Park in southeastern Inyo County, California. The study site is ca. 490 sq. km (189 sq. mi), with elevations ranging from 234 m (767 ft) to 1,949 m (6,394 ft) and includes the Nopah Range as well as portions of the California, Chicago, and Pahrump valleys. The objective of the study was to complete a specimen-based inventory of the vascular plants resulting in the production of an annotated checklist, and to assess the status of rare plant species and possible …

Fostering Infant And Toddler Music Competence At The Jean Tyson Child Development Study Center, Ellen Mathews, Laura Herold, Shelley Mcnally, Donia Timby

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

This paper presents a creative research project that introduced musical instruments in an outdoor setting to infants and toddlers ages 0-to-3 years old. It was grounded in research suggesting that music plays a vital component in expanding development in the early childhood years, helping to promote learning across many domains. This project began with a survey distributed to 7 infant and toddler classroom educators, after which responses were analyzed for themes regarding perceived infant interests. Subsequent observations were conducted to evaluate the best fit for the implementation of an outdoor experiential music space. Based on the findings, a developmentally appropriate …

Effects Of Cyclic Heat Stress On The Acute Inflammatory Response In Broilers, Alessandro J. Rocchi, Chrysta N. Beck, Jossie M. Santamaria, Gisela F. Erf

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Heat stress (HS) is a growing concern in broiler production. Little is known regarding the effect of HS on immune function. To examine the effects of HS on innate immunity, the local- and systemic-inflammatory responses to lipopolysaccharide (LPS) were examined in Cobb 500 male broiler chicks reared under thermoneutral (TN) or cyclic HS conditions. Beginning at four days of age, HS birds were subjected to 35 °C from 8:00 a.m. to 10:00 p.m. and TN temperatures from 10:00 p.m. to 8:00 a.m. At 37 days of age, four groups of broilers were formed: LPS-TN (8 broilers), phosphate-buffered saline (PBS)-TN (4 …

Effects Of Time-Restricted Feeding And Whey Protein Isolate Supplementation On Dietary Intake, Mood, And Sleep In A 12-Week Randomized Controlled Trial, Sydney E. Boudrey, Aubree L. Hawley

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Obesity affects adults in the United States, leading to chronic diseases and reduced well-being. Time-Restricted Feeding (TRF) is a type of dietary intervention lacking current data regarding the effectiveness on facets of well-being. This study’s objective was to determine the effect of time-restricted feeding supplemented with whey protein isolate on food intake, sleep, and mood in overweight or obese adults. Nineteen participants were randomly assigned to the control or experimental group: 1) control, TRF, and 2) experimental, TRF with whey protein supplementation. Participants followed the assigned dietary intervention for 12 weeks. Every 4 weeks (baseline, week 4, week 8, and …

Rice Biomass Response To Various Phosphorus Fertilizers In A Phosphorus-Deficient Soil Under Simulated Furrow-Irrigation, Jonathan B. Brye, Kristofor R. Brye, Diego Della Lunga

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Wastewater-recovered phosphorus (P), in the form of the mineral struvite (MgNH4PO4∙6H2O), may provide a sustainable alternative to decreasing rock-phosphate reserves. Struvite can be generated via precipitation methods, potentially reducing the amount of P runoff to aquatic ecosystems. The objective of this greenhouse tub study was to evaluate the effects of chemically and electrochemically precipitated struvite (CPST and ECST, respectively) on aboveground plant response in a hybrid rice cultivar grown using furrow-irrigation compared to other common fertilizer-P sources [i.e., triple super phosphate (TSP) and diammonium phosphate (DAP)] using three replications of fertilizer treatment in a P-deficient silt loam (Typic Glossaqualfs). Aboveground …

Temporal, Phenotypic, And Quantitative Characterization Of Thyroid Infiltrating Mononuclear Cells During Development Of Spontaneous Autoimmune Thyroiditis In Obese Strain Chickens, Katelyn M. Clark, Chrysta N. Beck, Gisela F. Erf

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

The Obese strain (OS) of chickens spontaneously develops autoimmune thyroiditis (SAT) and is a well-established biomedical model for Hashimoto’s thyroiditis in humans. Both conditions are characterized by the infiltration of thyroid glands with mononuclear immune cells resulting in the destruction of thyroid tissue and impairment of the thyroid’s endocrinological functions. Past studies described immune cell infiltration in thyroids of the OS chickens, but the time-course, cell composition, and relative amounts of the various immune cells infiltrating the thyroids have not been well defined. In this project, frozen and stored thyroid glands that were previously collected at 1, 4, 7, 14, …

Prevalence Of Hesperevax Sparsiflora Var. Brevifolia (Short-Leaved Evax) At Ocean Ranch, Humboldt County, California: Exploring The Effects Of Disturbance, Shelby Diquirco, Matthew Estrada, Alana T. Fraley, Alexander D. Smith

Environmental Science & Management Senior Capstones

The prevalence of special-status plants within a landscape can be an indicator of the ecological health of that site, and therefore inform restoration efforts and post-restoration monitoring. Hesperevax sparsiflora var. brevifolia (short-leaved evax) is a special status species found within the Ocean Ranch unit of Humboldt, California. A primary threat to native plant communities are invasive plant species. Coastal dune ecosystems are largely dominated by invasive species, including Ammophila arenaria (European beachgrass). To work towards the eradication of A. arenaria, the California Department of Fish and Wildlife utilized treatment combinations of herbicide and prescribed fire at Ocean Ranch in …

Contents 41(1–2)

Aliso: A Journal of Systematic and Floristic Botany

No abstract provided.

Forty Years Of Change In Piute Cypress (Hesperocyparis Nevadensis), A Rare California Tree, After Frequent Fire And Drought, Amarina Wuenschel, Jim A. Bartel, Alexis Bernal

Aliso: A Journal of Systematic and Floristic Botany

Piute cypress (Hesperocyparis nevadensis) is a rare cypress species endemic to the Lake Isabella region in the southern Sierra Nevada in California. Piute cypress groves have not been quantitatively studied in the last 40 years and with recent fires (some in short succession) and observed mortality, we had questions surrounding conditions in groves recovering from fire compared to other groves with no recorded fire histories. Piute cypress rarely survive fire and are obligate seeders with serotinous cones and, as such, require sufficient time after fire to grow to reproductive maturity to be able to withstand future fire. We …

Modelling Pollinator And Nonpollinator Selection On Flower Colour Variation, Brigitte Tenhumberg, Agnes S. Dellinger, Stacey D. Smith

School of Biological Sciences: Faculty Publications

1. Flower colour variation is ubiquitous within and between populations, which is why it has long been a focal point for studies of natural selection. This body of work has uncovered a wide range of selective agents, including pollinators, herbivores, and various abiotic factors. Nevertheless, we lack an integrative framework for predicting the phenotypic outcome in terms of floral pigmentation when these forces act collectively and often in opposition. 2. We here present such a framework through a model that incorporates selection on pigmentation at the vegetative phase (i.e., through survival to reproduction) and at the flowering phase (i.e., on …

Life History, Resource Allocation, And Phenology Of Diploid Flowering Rush (Butomus Umbellatus) Collected From Populations In Ohio And New York, Maxwell G. Gebhart

All Graduate Theses, Dissertations, and Other Capstone Projects

Flowering rush (Butomus umbellatus) is an invasive wetland perennial monocot that is native to eastern Europe that invaded north America in the early 1900’s. Flowering rush made its way to the Great Lakes in the mid-1950’s and has now invaded lake and wetland systems along the U.S. – Canadian border causing a host of issues related to water quality and water use. Within the current invaded range two cytotypes, a diploid and a triploid, have been documented which much of the current research and developed management strategies have been largely on the triploid. Research presented here is on the diploid …

Contents, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Letter From The Dean, Jean-Francois Meullenet

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Featured Faculty Mentor/Student Team, Gisela Erf, Alessandro Rocchi

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Changes And Relationships Of Soil Aluminum, Organic Matter, And Hydrogen Ion Concentration With Rye Cover Crop, Arron Wilder

Cal Poly Humboldt theses and projects

Soil acidity is a common agricultural problem worldwide, as approximately 50% of all potentially arable soils are affected by pH limitations. At soil pH 3+) is considered to be the chemical form of aluminum in acid soil that hinders plant growth the most. Potentially, soil organic matter (SOM) can ameliorate the toxic effects of Al³⁺ on plants and microbes by binding with Al³⁺, thus preventing Al³⁺ (and other species of aluminum) from interacting in the rhizosphere. Increasing SOM also increases soil health indicators (i.e., microbial activity, soil water holding capacity, aggregate stability, porosity, etc.) while the …