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Full-Text Articles in Botany

Preliminary Isozyme Evidence On The Hybrid Origin And Diploid Progenitors Of Bromus Pectinatus (Poaceae), Tatjana Oja Dec 2007

Preliminary Isozyme Evidence On The Hybrid Origin And Diploid Progenitors Of Bromus Pectinatus (Poaceae), Tatjana Oja

Aliso: A Journal of Systematic and Floristic Botany

Isozyme electrophoresis was used to study the origin of Bromus pectinatus (Poaceae, Pooideae). The morphological characteristics of B. pectinatus are intermediate between B. japonicus of sect. Bromus and B. tectorum of sect. Genea. Previous authors have suggested that sects. Bromus and Genea may be linked through B. pectinatus, a species that has been classified in sect. Bromus, though this placement has been questioned. Isozyme data support the allotetraploid nature of B. pectinatus and its position between sects. Bromus and Genea. Several heterozymes are consistent with the view that B. pectinatus may have arisen through polyploidization of …


Phylogeny Of The Grasses (Poaceae) Revisited, Melvin R. Duvall, Jerrold I Davis, Lynn G. Clark, Jeffrey D. Noll, Douglas H. Goldman, J. Gabriel Sánchez-Ken Dec 2007

Phylogeny Of The Grasses (Poaceae) Revisited, Melvin R. Duvall, Jerrold I Davis, Lynn G. Clark, Jeffrey D. Noll, Douglas H. Goldman, J. Gabriel Sánchez-Ken

Aliso: A Journal of Systematic and Floristic Botany

The most robust previously published phylogeny for the overall structure of the grass family (Poaceae) shows three early diverging lineages and two major derived clades, the BEP clade and the PACCAD clade (Grass Phylogeny Working Group 2001). A few key taxa were incompletely sampled, however, and support for the BEP clade was moderate at best and relationships among the major lineages within the PACCAD clade remained unresolved. In addition, recent studies indicated that the sister group to Poaceae may be Joinvilleaceae and/or Ecdeiocoleaceae, the latter of which were not previously sampled. In this study, missing structural data were determined and …


Phylogeny And Biogeography Of Endemic Festuca (Poaceae) From New Zealand Based On Nuclear (Its) And Chloroplast (Trnl–Trnf) Nucleotide Sequences, Kelvin M. Lloyd, Angela M. Hunter, David A. Orlovich, Suzanne J. Draffin, Alan V. Stewart, William G. Lee Dec 2007

Phylogeny And Biogeography Of Endemic Festuca (Poaceae) From New Zealand Based On Nuclear (Its) And Chloroplast (Trnl–Trnf) Nucleotide Sequences, Kelvin M. Lloyd, Angela M. Hunter, David A. Orlovich, Suzanne J. Draffin, Alan V. Stewart, William G. Lee

Aliso: A Journal of Systematic and Floristic Botany

We investigated the phylogenetic relationships of the endemic New Zealand (NZ) species of Festuca (Poaceae, Pooideae) by assessing sequence variation from the nuclear internal transcribed spacers (ITS) and a chloroplast intergenic spacer (trnL–trnF) and by measuring DNA content using flow cytometry. The ITS and trnL–trnF data sets were congruent in showing that the NZ species of Festuca have two origins. One group, containing F. coxii, F. luciarum, F. multinodis, and F. ultramafica, is closely related to Festuca sect. Aulaxyper. The other group includes a clade of five endemic …


Relationships Among Some Populations Of Anthoxanthum Alpinum And A. Odoratum (Poaceae, Pooideae): A Morphological/Anatomical Approach, Manuel Pimentel, Elvira Sahuquillo Dec 2007

Relationships Among Some Populations Of Anthoxanthum Alpinum And A. Odoratum (Poaceae, Pooideae): A Morphological/Anatomical Approach, Manuel Pimentel, Elvira Sahuquillo

Aliso: A Journal of Systematic and Floristic Botany

The genus Anthoxanthum s.l. (including Hierochloë) (Poaceae, Pooideae, Aveneae) comprises 35–50 species and has a cosmopolitan distribution. Anthoxanthum alpinum was described as a diploid perennial that is distributed in northern Eurasia and in the high mountains of central and eastern Europe. Difficulties in finding reliable morphological differences between this taxon and the widespread tetraploid A. odoratum have resulted in taxonomists treating them as conspecific, despite the cytological differentiation. The purpose of this study was to provide information that may help clarify the relationships between these taxa. Macromorphologial, micromorphological, and anatomical data were gathered and analyzed for 14 populations representing …


Systematics Of Bromelioideae (Bromeliaceae)—Evidence From Molecular And Anatomical Studies, Ralf Horres, Katharina Schulte, Kurt Weising, Georg Zizka Dec 2007

Systematics Of Bromelioideae (Bromeliaceae)—Evidence From Molecular And Anatomical Studies, Ralf Horres, Katharina Schulte, Kurt Weising, Georg Zizka

Aliso: A Journal of Systematic and Floristic Botany

A reconstruction of the phylogeny of Bromeliaceae based on sequence data from three noncoding chloroplast DNA markers (trnL intron, trnT–trnL, and trnT–trnF intergenic spacer [IGS]) is presented, including 26 genera and 33 species. Relationships of Bromelioideae and phylogeny within this subfamily were analyzed in more detail on the basis of two of these markers (trnL intron and trnL–trnF IGS) using a set of 37 genera/74 species of Bromeliaceae, including 28 genera/60 species of Bromelioideae. Sister group relationships of Bromelioideae were not resolved with sufficient reliability, but the …


Phylogeny Of Abildgaardieae (Cyperaceae) Inferred From Its And Trnl–F Data, Kioumars Ghamkhar, Adam D. Marchant, Karen L. Wilson, Jeremy J. Bruhl Dec 2007

Phylogeny Of Abildgaardieae (Cyperaceae) Inferred From Its And Trnl–F Data, Kioumars Ghamkhar, Adam D. Marchant, Karen L. Wilson, Jeremy J. Bruhl

Aliso: A Journal of Systematic and Floristic Botany

Within the tribe Abildgaardieae, the relationships between Fimbristylis and its relatives have not been certain, and the limits of Fimbristylis have been unclear, with Bulbostylis and Abildgaardia variously combined with it and each other. The relationships and limits of tribes Abildgaardieae and Arthrostylideae and their genera were evaluated across 49 representative species using parsimony and maximum likelihood analyses of ITS (nuclear ribosomal) and trnL–F (plastid) DNA sequence data separately and combined. The evolutionary reconstructions derived from sequences of cpDNA and nrDNA disagree about the position of tribe Arthrostylideae relative to Abildgaardieae; Arthrostylis and Actinoschoenus are either nested within Abildgaardieae …


Large Trees, Supertrees, And Diversification Of The Grass Family, Trevor R. Hodkinson, Nicolas Salamin, Mark W. Chase, Yanis Bouchenak-Khelladi, Stephen A. Renvoize, Vincent Savolainen Dec 2007

Large Trees, Supertrees, And Diversification Of The Grass Family, Trevor R. Hodkinson, Nicolas Salamin, Mark W. Chase, Yanis Bouchenak-Khelladi, Stephen A. Renvoize, Vincent Savolainen

Aliso: A Journal of Systematic and Floristic Botany

Phylogenetic studies of grasses (Poaceae) are advanced in comparison with most other angiosperm families. However, few studies have attempted to build large phylogenetic trees of the family and use these for evaluating patterns of diversification or other macroevolutionary hypotheses. Two contrasting approaches can be used to generate large trees: supermatrix analyses and supertrees. In this paper, we evaluated the suitability of each of these methods for the study of patterns and processes of evolution in the grasses. We collected data from DDBJ/EMBL/GenBank to determine sequence availability and asked how far we are from a complete generic-level phylogenetic tree of the …


Allopolyploids Of The Genus Elymus (Triticeae, Poaceae): A Phylogenetic Perspective, Roberta J. Mason-Gamer Dec 2007

Allopolyploids Of The Genus Elymus (Triticeae, Poaceae): A Phylogenetic Perspective, Roberta J. Mason-Gamer

Aliso: A Journal of Systematic and Floristic Botany

The wheat tribe, Triticeae, includes many genomically distinct polyploid taxa. Elymus is an entirely allopolyploid genus, with all species containing the St genome of Pseudoroegneria. The St genome may be combined with one or more distinct genomes representing multiple, diverse diploid donors from throughout the tribe. This study includes a simultaneous phylogenetic analysis of new and previously published data from several distinct Elymus groups, including North American and Eurasian StStHH tetraploids, in which the H genome is derived from Hordeum, Eurasian StStYY tetraploids, in which the Y genome is derived from an unknown donor, and a putative StStStStHH …


Molecular Phylogenetics Of Bromus (Poaceae: Pooideae) Based On Chloroplast And Nuclear Dna Sequence Data, Jeffery M. Saarela, Paul M. Peterson, Ryan M. Keane, Jacques Cayouette, Sean W. Graham Dec 2007

Molecular Phylogenetics Of Bromus (Poaceae: Pooideae) Based On Chloroplast And Nuclear Dna Sequence Data, Jeffery M. Saarela, Paul M. Peterson, Ryan M. Keane, Jacques Cayouette, Sean W. Graham

Aliso: A Journal of Systematic and Floristic Botany

We conducted a phylogenetic analysis to characterize relationships among Bromus and test the monophyly of five of the seven morphologically distinct groups within Bromus (Poaceae: Pooideae) that have been treated as sections, subgenera, or genera. We sequenced the chloroplast trnL (UAA) intron, the 3'-end of the chloroplast ndhF gene, and the internal transcribed spacers (ITS) of the nuclear ribosomal DNA region for 46 species that represent a large proportion of the morphological and geographical diversity in the genus. Independent analyses of plastid and nuclear ribosomal data identified several lineages in Bromus, but there is some evidence of …


Dicliny In Bouteloua (Poaceae: Chloridoideae): Implications For The Evolution Of Dioecy, Michael S. Kinney, J. Travis Columbus, Elizabeth A. Friar Dec 2007

Dicliny In Bouteloua (Poaceae: Chloridoideae): Implications For The Evolution Of Dioecy, Michael S. Kinney, J. Travis Columbus, Elizabeth A. Friar

Aliso: A Journal of Systematic and Floristic Botany

The New World grass genus Bouteloua (Chloridoideae: Cynodonteae) comprises 57 species, 13 of which produce unisexual spikelets and hence are diclinous. Andromonoecy, gynodioecy, monoecy, trimonoecy, and dioecy all occur in the genus, and ten species are known to express more than one of these breeding systems. Employing a phylogenetic estimate based on parsimony analysis of DNA sequences from the ITS (nrDNA) and trnL–F (cpDNA) regions representing 35 species of Bouteloua, including ten of 13 diclinous species, we used parsimony character state reconstructions to investigate the evolution of unisexual spikelets and breeding systems. Our specific goals were to estimate …


Phylogeny, Adaptive Radiation, And Historical Biogeography Of Bromeliaceae Inferred From Ndhf Sequence Data, Thomas J. Givnish, Kendra C. Millam, Paul E. Berry, Kenneth J. Sytsma Dec 2007

Phylogeny, Adaptive Radiation, And Historical Biogeography Of Bromeliaceae Inferred From Ndhf Sequence Data, Thomas J. Givnish, Kendra C. Millam, Paul E. Berry, Kenneth J. Sytsma

Aliso: A Journal of Systematic and Floristic Botany

Cladistic analysis of ndhF sequences identifies eight major bromeliad clades arranged in ladderlike fashion. The traditional subfamilies Tillandsioideae and Bromelioideae are monophyletic, but Pitcairnioideae are paraphyletic, requiring the description of four new subfamilies, recircumscription of Pitcairnioideae and Navioideae, the sinking of Ayensua, and description of the new genus Sequencia. Brocchinioideae are basalmost, followed by Lindmanioideae, both restricted to the Guayana Shield. Next is an unresolved trichotomy involving Hechtioideae from Central America, Tillandsioideae, and the remaining bromeliads in subfamilies Navioideae, Pitcairnioideae, Puyoideae, and Bromelioideae. Bromeliads arose as C3 terrestrial plants on moist infertile sites in …


Towards A Comprehensive Survey Of C3 And C4 Photosynthetic Pathways In Cyperaceae, Jeremy J. Bruhl, Karen L. Wilson Dec 2007

Towards A Comprehensive Survey Of C3 And C4 Photosynthetic Pathways In Cyperaceae, Jeremy J. Bruhl, Karen L. Wilson

Aliso: A Journal of Systematic and Floristic Botany

Members of the family Cyperaceae were surveyed by original observation and from the literature to assess the distribution of C3 and C4 photosynthetic pathways in the family. All 107 genera were included in the current sample, with 91 genera assessed as consistently C3 and 11 genera as C4. The genera Abildgaardia, Cyperus, Eleocharis, Fimbristylis, and Rhynchospora are variable for this trait. Of the total number (1474) of specific (1406) and infraspecific (68) taxa sampled, 938 taxa (63%) are C3, 527 taxa (36%) are C4, and nine species …


A Preliminary Phylogenetic Analysis Of The Grass Subfamily Pooideae (Poaceae), With Attention To Structural Features Of The Plastid And Nuclear Genomes, Including An Intron Loss In Gbssi, Jerrold I Davis, Robert J. Soreng Dec 2007

A Preliminary Phylogenetic Analysis Of The Grass Subfamily Pooideae (Poaceae), With Attention To Structural Features Of The Plastid And Nuclear Genomes, Including An Intron Loss In Gbssi, Jerrold I Davis, Robert J. Soreng

Aliso: A Journal of Systematic and Floristic Botany

Phylogenetic relationships in the grass family (Poaceae), with specific attention to the internal structure of subfamily Pooideae, are analyzed on the basis of nucleotide sequence variation in plastid-encoded genes (matK, ndhF, ndhH, and rbcL). The resulting phylogenetic hypothesis was examined with attention to the taxonomic distributions of two inversions and an insertion/deletion within ndhF, the absence of intron 10 of the nuclear gene GBSSI (waxy), and positions of the boundaries between the Short Single Copy (SSC) region and the neighboring Inverted Repeat (IR) regions of the plastid genome, relative to the endpoints of ndh …


Phylogenetic Relationships Among The One-Flowered, Determinate Genera Of Bambuseae (Poaceae: Bambusoideae), Lynn G. Clark, Soejatmi Dransfield, Jimmy Triplett, J. Gabriel Sánchez-Ken Dec 2007

Phylogenetic Relationships Among The One-Flowered, Determinate Genera Of Bambuseae (Poaceae: Bambusoideae), Lynn G. Clark, Soejatmi Dransfield, Jimmy Triplett, J. Gabriel Sánchez-Ken

Aliso: A Journal of Systematic and Floristic Botany

Bambuseae (woody bamboos), one of two tribes recognized within Bambusoideae (true bamboos), comprise over 90% of the diversity of the subfamily, yet monophyly of the tribe is generally only moderately supported, and phylogenetic relationships within the tribe are poorly understood. In addition, there appears to be some level of conflict between morphological and molecular data within the tribe. We conducted a parsimony analysis of 43 species of Bambuseae, three of Olyreae (herbaceous bamboos), and two outgroup taxa using morphological and plastid rpl16 intron sequence data to (1) further test the monophyly of Bambuseae, (2) test the monophyly of Chusqueinae …


Phylogenetics Of Chloridoideae (Gramineae): A Preliminary Study Based On Nuclear Ribosomal Internal Transcribed Spacer And Chloroplast Trnl–F Sequences, J. Travis Columbus, Rosa Cerros-Tlatilpa, Michael S. Kinney, Maria Elena Siqueiros-Delgado, Hester L. Bell, M. Patrick Griffith, Nancy F. Refulio-Rodriguez Dec 2007

Phylogenetics Of Chloridoideae (Gramineae): A Preliminary Study Based On Nuclear Ribosomal Internal Transcribed Spacer And Chloroplast Trnl–F Sequences, J. Travis Columbus, Rosa Cerros-Tlatilpa, Michael S. Kinney, Maria Elena Siqueiros-Delgado, Hester L. Bell, M. Patrick Griffith, Nancy F. Refulio-Rodriguez

Aliso: A Journal of Systematic and Floristic Botany

The phylogeny of Chloridoideae (Gramineae) was inferred from parsimony analyses of DNA sequences from two genomes—the chloroplast trnL intron, trnL 3' exon, and trnL–F intergenic spacer, and the nuclear ribosomal internal transcribed spacer region (ITS1 + 5.8S + ITS2). Eighty species representing 66 chloridoid genera were sampled, including all but four of the native New World genera. Analyses of the individual and combined data sets were performed. The phylogenies were found to be highly congruent. Of the four tribes and seven subtribes of Chloridoideae sensu Clayton and Renvoize (1986) whose phylogenetic status could be tested with our …


Ranunculus Arvensis (Ranunculaceae), An Alien Weed New To Southern California, Richard E. Riefner Jr, Steve Boyd Jul 2007

Ranunculus Arvensis (Ranunculaceae), An Alien Weed New To Southern California, Richard E. Riefner Jr, Steve Boyd

Aliso: A Journal of Systematic and Floristic Botany

We report the first known records of Ranunculus arvensis from southern California. This alien species shows a tendency to behave as a facultative wetland plant, and could become a pest in scoured washes and flood plains, ephemeral pools, and on disturbed stream banks in the coastal lowlands.


Distribution Patterns Of Great Basin Conifers: Implications Of Extinction And Immigration, David A. Charlet Jul 2007

Distribution Patterns Of Great Basin Conifers: Implications Of Extinction And Immigration, David A. Charlet

Aliso: A Journal of Systematic and Floristic Botany

Factors influencing the distribution of scattered montane conifers on mountaintops in the Great Basin of North America were investigated. The sources of data were collections and observations on more than 300 mountain ranges in the region. All mountains in the region with at least one montane conifer species and all adjacent source areas were included in the data set. In all, 164 montane island sites and 40 mainland sites were used in the analyses. Physical data for each site were compiled and regression analyses were conducted to test the predictions of three island biogeography models: immigration, extinction, and equilibrium. These …


Reassessment Of Yucca Brevifolia And Recognition Of Y. Jaegeriana As A Distinct Species, Lee W. Lenz Jul 2007

Reassessment Of Yucca Brevifolia And Recognition Of Y. Jaegeriana As A Distinct Species, Lee W. Lenz

Aliso: A Journal of Systematic and Floristic Botany

A brief historical account of the Joshua tree (Yucca brevifolia, Agavaceae) is presented. The geographical distribution, morphological and pollinator differences between subsp. brevifolia and subsp. jaegeriana are examined and the latter is raised to specific rank. The fossil Protoyucca and its possible relationship to the Joshua trees are considered together with implications as to the possible origin of the genus.


Vascular Plants Of The Whipple Mountains, Sarah J. De Groot Jul 2007

Vascular Plants Of The Whipple Mountains, Sarah J. De Groot

Aliso: A Journal of Systematic and Floristic Botany

The Sonoran and Mojave deserts meet just north of the Whipple Mountains, which are situated in southeast San Bernardino County, California, along the Colorado River and adjacent to Arizona. Vegetation from the Pleistocene to the present was inferred from previously published packrat midden data and the current floristic composition. Climate data suggest that summer rainfall is a factor underlying the vegetational differences between the western and eastern portions of the Sonoran desert. Plant collections in the area yielded primarily California Sonoran plants, but also several Mojave and Arizona Sonoran plants. A fair number of the Arizona Sonoran plants collected were …


Wood Anatomy Of Crossosomatales: Patterns Of Wood Evolution With Relation To Phylogeny And Ecology, Sherwin Carlquist Jul 2007

Wood Anatomy Of Crossosomatales: Patterns Of Wood Evolution With Relation To Phylogeny And Ecology, Sherwin Carlquist

Aliso: A Journal of Systematic and Floristic Botany

The seven families hypothesized by Sosa and Chase to comprise Crossosomatales possess relatively long vessel elements with scalariform perforation plates and scalariform to opposite vessel-ray pitting; tracheids; diffuse axial parenchyma; and heterogeneous rays. These and other primitive character states do not indicate relationships, but they do not offer any evidence against the idea that Crossosomatales are a natural order. Departures from the primitive character states are related to ecological adaptations. Crossosomataceae have simple perforation plates (scalariform briefly at the beginning of the secondary xylem), a feature correlated with the seasonal aridity of habitats occupied by the family, the sole family …


A Brief Nomenclatural Review Of Genera And Tribes In Theaceae, Linda M. Prince Jul 2007

A Brief Nomenclatural Review Of Genera And Tribes In Theaceae, Linda M. Prince

Aliso: A Journal of Systematic and Floristic Botany

The angiosperm family Theaceae has been investigated extensively with a rich publication record of anatomical, cytological, paleontological, and palynological data analyses and interpretation. Recent developmental and molecular data sets and the application of cladistic analytical methods support dramatic changes in circumscription at the familial, tribal, and generic levels. Growing interest in the family outside the taxonomic and systematic fields warrants a brief review of the recent nomenclatural history (mainly 20th century), some of the classification systems currently in use, and an explanation of which data support various classification schemes. An abridged bibliography with critical nomenclatural references is provided.


Notes On Native Vascular Plants From Mima Mound-Vernal Pool Terrain And The Importance Of Preserving Coastal Terraces In Orange County, California, Richard E. Riefner Jr., Steve Boyd, Roy J. Shlemon Jul 2007

Notes On Native Vascular Plants From Mima Mound-Vernal Pool Terrain And The Importance Of Preserving Coastal Terraces In Orange County, California, Richard E. Riefner Jr., Steve Boyd, Roy J. Shlemon

Aliso: A Journal of Systematic and Floristic Botany

We report the following noteworthy collections of native vascular plants from mima mound fields in coastal Orange County, California: Deschampsia danthonioides, Lepidium strictum, and Sagina saginoides (new county records), Lepidium oblongum var. oblongum (previously excluded from the flora), Deinandra paniculata, Holocarpha virgata subsp. elongata, and Navarretia prostrata (new localities in the county), and Hordeum brachyantherum subsp. californicum (uncommon species of local interest). A herbarium study, preparation of voucher specimens, and a generalized distribution, facultative wetland status, and taxonomic notes, where appropriate, are cited for each taxon. An overview of the mima mound micro-relief associated with coastal …


The Fossil Record Of Basal Monocots, Ruth A. Stockey Jan 2006

The Fossil Record Of Basal Monocots, Ruth A. Stockey

Aliso: A Journal of Systematic and Floristic Botany

The fossil record of basal monocots (Acorales and Alismatales) extends back to the Cretaceous in the Northern Hemisphere. While many fossils were originally assigned to these basal groups, rigorous paleobotanical studies show many of them to be misidentified. Acarus fossils have been reliably reported from the Eocene while those of Alismatales extend back to the early Cretaceous. The fossil record of basal monocots is usually represented by leaves, fruits, and seeds; however, some localities preserve stems with attached leaves and roots and even whole plants. A detailed examination of leaf venation patterns in alismatids has recently allowed the description of …


Aperture Pattern And Microsporogenesis In Asparagales, Sophie Nadot, Laurent Penet, Leanne D. Dreyer, Arlette Forchioni, Adrienne Ressayre Jan 2006

Aperture Pattern And Microsporogenesis In Asparagales, Sophie Nadot, Laurent Penet, Leanne D. Dreyer, Arlette Forchioni, Adrienne Ressayre

Aliso: A Journal of Systematic and Floristic Botany

The aperture pattern of pollen grains is a character defined as the number, shape, and position of apertures. Although this character is highly variable in angiosperms, two states are particularly widespread. Pollen grains with one polar aperture occur frequently in basal angiosperms and monocots while tricolpate pollen is a synapomorphy of the eudicots. Many morphological characters are the result of a compromise between selective forces (acting on morphology) and developmental constraints (limiting the range of possible morphologies). To investigate what are the respective roles of development and selection in the determination of aperture pattern in angiosperms, we have chosen to …


The Operculum In Pollen Of Monocotyledons, Carol A. Furness, Paula J. Rudall Jan 2006

The Operculum In Pollen Of Monocotyledons, Carol A. Furness, Paula J. Rudall

Aliso: A Journal of Systematic and Floristic Botany

Within monocotyledons, monosulcate pollen is the predominant type and probably represents the plesiomorphic condition, but considerable variation occurs in sulcus morphology. An operculum is an exine thickening that covers most of an aperture. Monocot opercula are usually associated with sulci, although they can occur in ulcerate apertures, as in Poaceae. There are several other aperture types closely related to the monosulcate-operculate type, and confusion occurs in the palynological literature between monosulcate-operculate, pontoperculate, disulculate, disulcate, and zona-aperturate (zonasulculate or zonasulcate) pollen. Transmission electron microscopy (TEM) was used to determine the distribution of the thick apertural intine and to accurately identify these …


Robust Inference Of Monocot Deep Phylogeny Using An Expanded Multigene Plastid Data Set, Sean W. Grahan, Jessie M. Zgurski, Marc A. Mcpherson, Donna M. Cherniawsky, Jeffery M. Saarela, Elvira F. C. Horne, Selena Y. Smith, Winson A. Young, Heath E. O'Brien, Vincent L. Brown, J. Chris Pires, Richard G. Olmstead, Mark W. Chase, Hardeep S. Rai Jan 2006

Robust Inference Of Monocot Deep Phylogeny Using An Expanded Multigene Plastid Data Set, Sean W. Grahan, Jessie M. Zgurski, Marc A. Mcpherson, Donna M. Cherniawsky, Jeffery M. Saarela, Elvira F. C. Horne, Selena Y. Smith, Winson A. Young, Heath E. O'Brien, Vincent L. Brown, J. Chris Pires, Richard G. Olmstead, Mark W. Chase, Hardeep S. Rai

Aliso: A Journal of Systematic and Floristic Botany

We use multiple photosynthetic, chlororespiratory, and plastid translation apparatus loci and their associated noncoding regions (ca. 16 kb per taxon, prior to alignment) to make strongly supported inferences of the deep internal branches of monocot phylogeny. Most monocot relationships are robust (an average of ca. 91 % bootstrap support per branch examined), including those poorly supported or unresolved in other studies. Our data strongly support a sister-group relationship between Asparagales and the commelinid monocots, the inclusion of the orchids in Asparagales, and the status of Petrosaviaceae as the sister group of all monocots except Acorus and Alismatales. The latter finding …


Vegatative Architecture Of Desiccation-Tolerant Arborescent Monocotyledons, Stefan Porembski Jan 2006

Vegatative Architecture Of Desiccation-Tolerant Arborescent Monocotyledons, Stefan Porembski

Aliso: A Journal of Systematic and Floristic Botany

Within the monocotyledons the acquisition of the tree habit is enhanced by either primary growth of the axis or a distinctive mode of secondary growth. However, a few arborescent monocotyledons deviate from this pattern in developing trunks up to four meters high that resemble those of tree ferns, i.e., their "woody-fibrous" stems consist mainly of persistent leaf bases and adventitious roots. This type of arborescent monocotyledon occurs in both tropical and temperate regions and is found within Boryaceae (Borya), Cyperaceae (Afrotrilepis, Bulbostylis, Coleochloa, Microdracoides), and Velloziaceae (e.g., Vellozia, Xerophyta). They have developed in geographically widely separated regions …


Systematics Of Xanthorrhoeaceae Sensu Lato, With An Emphasis On Bulbine, Dion S. Devey, Ilia Leitch, J. Chris Pires, Yohan Pillon, Mark W. Chase Jan 2006

Systematics Of Xanthorrhoeaceae Sensu Lato, With An Emphasis On Bulbine, Dion S. Devey, Ilia Leitch, J. Chris Pires, Yohan Pillon, Mark W. Chase

Aliso: A Journal of Systematic and Floristic Botany

We provide here results of a combined analysis of plastid genes rbcL, matK, and ndhF for Xanthorrhoeaceae s.l., the Asphodelaceae/Xanthorrhoeaceae/Hemerocallidaceae clade, which are well supported by the DNA data. Xanthorrhoea (often treated as the sole member of Xanthorrhoeaceae) is sister to the hemerocallid clade (former Hemerocallidaceae); and the asphodelid clade (formerly Asphodelaceae) is sister to them both. For additional species of Bulbine and Jodrellia (both Asphodeloideae), we also collected rps16 intron and ITS nuclear ribosomal DNA sequences to better assess their relationships. Bulbine, with Jodrellia, embedded are sister to the collective genera of subfamily Alooideae in …


Placing The Monocots: Conflicting Signal From Trigenomic Analyses, Melvin R. Duvall, Sarah Matthews, Neill Mohammad, Tammy Russel Jan 2006

Placing The Monocots: Conflicting Signal From Trigenomic Analyses, Melvin R. Duvall, Sarah Matthews, Neill Mohammad, Tammy Russel

Aliso: A Journal of Systematic and Floristic Botany

Despite recent significant advances in understanding angiosperm phylogeny, the position of monocots remains uncertain. We present here a phylogeny inferred from four genes that unambiguously unite monocots with eumagnoliids. A well-supported position for the monocots was obtained only after we replaced the available nuclear 18S rDNA sequence data with data from phytochrome C in a matrix that also included plastid rbcL and ndhF and mitochondrial atp1. Over 5000 base pairs of sequence data from 42 taxa were analyzed using Bayesian inference. The results of these analyses united monocots with the eumagnoliids in a well-supported clade. Although the …


Perianth Development In The Basal Monocot Triglochin Maritima (Juncaginaceae), Matyas Buzgo, Douglas E. Soltis, Pamela S. Soltis, Sangtae Kim, Hong Ma, Bernard A. Hauser, Jim Lebens-Mack, Bo Johansen Jan 2006

Perianth Development In The Basal Monocot Triglochin Maritima (Juncaginaceae), Matyas Buzgo, Douglas E. Soltis, Pamela S. Soltis, Sangtae Kim, Hong Ma, Bernard A. Hauser, Jim Lebens-Mack, Bo Johansen

Aliso: A Journal of Systematic and Floristic Botany

Basal monocots exhibit considerable variation in inflorescence and floral structure. In some cases, such as Triglochin maritima, it is not clear whether the lateral and terminal structures of the inflorescence are flowers or pseudanthia, or where the limits between flowers and inflorescence lie. To address these questions, morphological studies were carried out, and the results show that in T. maritima both terminal and lateral structures are flowers, not pseudanthia. The terminal flower of T. maritima develops from the apical inflorescence meristem, suggesting that the apical meristem identity changes from "inflorescence" to "flower" during inflorescence development. In addition, distal flowers …