Agronomy and Crop Sciences Commons^™

Breeding For Resistance In California Strawberry To Verticillium Dahliae, Zachary Christman

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

This article focuses on breeding resistant strawberries to the fungus Verticillium dahliae, common name Verticillium wilt. This is a serious fungal disease that can result in a loss of 50% or more of a strawberry harvest when grown in infested soil. The main goal is to provide an example of how a cultivar can be made more resistant to a plant pathogen with the use of plant breeding methods.

Since 1930 the University of California, Davis, has been developing strawberry cultivars that are adapted to the agricultural industry and regional farms. Developing cultivars that require fewer inputs are of …

2018 Barley Variety Fact Sheets For Western Australia, Blakely Paynter, Georgia Trainor, Raj Malik, Jeremy Curry, Sanjiv Gupta, Sarah Collins, Daniel Huberli, Harmohinder Dhammu, Geoff Thomas, Ben Biddulph

Bulletins 4000 -

This bulletin is designed as a reference to help determine which barley variety to grow in your region. It provides market feedback, relative grain yield comparisons, disease ratings, agronomic information and herbicide tolerance ratings for all malt barley varieties segregated in Western Australia (WA) and selected feed varieties.

The decision whether to grow barley with a malt or feed classification depends on five main factors:

(1) Premium paid for different varieties when segregated.

(2) Relative grain yield of malt and feed grade barley varieties.

(3) Differences in input costs due to their agronomic and disease characteristics.

(4) Likelihood that grain …

Review Of Genome-Wide Association Studies: From Polymorphism To Personalized Medicine, Jinliang Yang

Department of Agronomy and Horticulture: Faculty Publications

Genome-wide association studies (GWAS) has become a powerful tool in the area of quantitative genetics to map the relationship between trait and genomic variations. This volume provides a great resource for beginners to learn about the recent advances in GWAS and for domain experts to identify the gaps in the area. The first part of the volume lays out the statistical background of GWAS. I really liked the article by Yang et al., Introduction to Statistical Methods in Genome-Wide Association Studies. In this chapter, the authors talked about the missing heritability issue and introduced ways to calculate heritability using the …

Do Precision Chemical Amendment Applications Impact Sodium Movement In Dryland Semiarid Saline Sodic Soils?, Tulsi P. Kharel, David E. Clay, Cheryl Reese, Thomas Desutter, Doug D. Malo, Sharon Clay

Agronomy, Horticulture and Plant Science Faculty Publications

Expanding sodicity and salinity problems have placed many northern Great Plains (NGP) soils at the sustainability tipping point. This study assessed the impact of chemical restoration on water and salt transport in undisturbed soil columns collected from three hillslope model landscape positions. The backslope (Redfield), footslope (White Lake), and toeslope (Pierpont) soils had moderate (3.27 ± 0.59), high (7.3 ± 3.34), and very high (13.29 ± 3.2) sodium adsorption ratio (SAR_e) values, respectively. The soils were treated with KBr and one of four soil amendments (none, H₂SO₄, CaSO₄, and CaCl₂). …

Wayne E. Sabbe Arkansas Soil Fertility Studies 2017, Nathan A. Slaton

Arkansas Agricultural Experiment Station Research Series

Rapid technological changes in crop management and production require that the research efforts be presented in an expeditious manner. The contributions of soil fertility and fertilizers are major production factors in all Arkansas crops. The studies described within will allow producers to compare their practices with the university’s research efforts. Additionally, soil-test data and fertilizer sales are presented to allow comparisons among years, crops, and other areas within Arkansas.

Arkansas Cotton Variety Test 2017, Fred Bourland, W. Barnett, C. Kennedy, L. Martin, A. Rouse, B. Robertson

Arkansas Agricultural Experiment Station Research Series

The primary goal of the Arkansas Cotton Variety Test is to provide unbiased data regarding the agronomic performance of cotton varieties and advanced breeding lines in the major cotton-growing areas of Arkansas.

Mobilization And Role Of Starch, Protein, And Fat Reserves During Seed Germination Of Six Wild Grassland Species, Ming Zhao, Hongxiang Zhang, Hong Yan, Lu Qiu, Carol C. Baskin

Biology Faculty Publications

Since seed reserves can influence seed germination, the quantitative and qualitative differences in seed reserves may relate to the germination characteristics of species. The purpose of our study was to evaluate the correlation between germination and seed reserves, as well as their mobilization during germination of six grassland species (Chloris virgata, Kochia scoparia, Lespedeza hedysaroides, Astragalus adsurgens, Leonurus artemisia, and Dracocephalum moldavica) and compare the results with domesticated species. We measured starch, protein, and fat content in dry seeds and the initial absorption of water during imbibition. Starch, soluble protein, fat, and soluble …

An Epigenetic Breeding System In Soybean For Increased Yield And Stability, Sunil K. Kenchanmane Raju, Mon-Ray Shao, Robersy Sanchez, Ying-Zhi Xu, Ajay Sandhu, George L. Graef, Sally A. Mackenzie

Department of Agronomy and Horticulture: Faculty Publications

Epigenetic variation has been associated with a wide range of adaptive phenotypes in plants, but there exist few direct means for exploiting this variation. RNAi suppression of the plant-specific gene, MutS HOMOLOG1 (MSH1), in multiple plant species produces a range of developmental changes accompanied by modulation of defence, phytohormone and abiotic stress response pathways along with methylome repatterning. This msh1-conditioned developmental reprogramming is retained independent of transgene segregation, giving rise to transgene-null ‘memory’ effects. An isogenic memory line crossed to wild type produces progeny families displaying increased variation in adaptive traits that respond to selection. This study …

Impact Of Mid-Season Sulphur Deficiency On Wheat Nitrogen Metabolism And Biosynthesis Of Grain Protein, Zitong Yu, Angela Juhasz, Shahidul Islam, Dean Diepeveen, Jingjuan Zhang, Penghao Wang, Wujun Ma

Grain and Other Field Crops Research Articles

Wheat (Triticum aestivum) quality is mainly determined by grain storage protein compositions. Sulphur availability is essential for the biosynthesis of the main wheat storage proteins. In this study, the impact of different sulphur fertilizer regimes on a range of agronomically important traits and associated gene networks was studied. High-performance liquid chromatography was used to analyse the protein compositions of grains grown under four different sulphur treatments. Results revealed that sulphur supplementation had a significant effect on grain yield, harvest index, and storage protein compositions. Consequently, two comparative sulphur fertilizer treatments (0 and 30 kg ha−1 sulphur, with 50 …

Inheritance Of Mesotrione Resistance In An Amaranthus Tuberculatus (Var. Rudis) Population From Nebraska, Usa, Maxwel C. Oliveira, Todd A. Gaines, Amit J. Jhala, Stevan Z. Knezevic

Department of Agronomy and Horticulture: Faculty Publications

A population of Amaranthus tuberculatus (var. rudis) evolved resistance to 4- hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor herbicides (mesotrione, tembotrione, and topramezone) in Nebraska. The level of resistance was the highest to mesotrione, and the mechanism of resistance in this population is metabolism-based likely via cytochrome P450 enzymes. The increasing number of weeds resistant to herbicides warrants studies on the ecology and evolutionary factors contributing for resistance evolution, including inheritance of resistance traits. In this study, we investigated the genetic control of mesotrione resistance in an A. tuberculatus population from Nebraska, USA. Results showed that reciprocal crosses in the F1 families exhibited …

Genome-Wide Analysis Of Grain Yield Stability And Environmental Interactions In A Multiparental Soybean Population, Alencar Xavier, Diego Jarquin, Reka Howard, Vishnu Ramasubramanian, James E. Specht, George L. Graef, William D. Beavis, Brian W. Diers, Qijian Song, Perry B. Cregan, Randall L. Nelson, Rouf Mian, J. Grover Shannon, Leah K. Mchale, Dechun Wang, William Schapaugh, Aaron J. Lorenz, Shizhong Xu, William M. Muir, Katy M. Rainey

Department of Agronomy and Horticulture: Faculty Publications

Genetic improvement toward optimized and stable agronomic performance of soybean genotypes is desirable for food security. Understanding how genotypes perform in different environmental conditions helps breeders develop sustainable cultivars adapted to target regions. Complex traits of importance are known to be controlled by a large number of genomic regions with small effects whose magnitude and direction are modulated by environmental factors. Knowledge of the constraints and undesirable effects resulting from genotype by environmental interactions is a key objective in improving selection procedures in soybean breeding programs. In this study, the genetic basis of soybean grain yield responsiveness to environmental factors …

Resistance In 27 Rice Cultivars To Sugarcane Borer (Lepidoptera: Crambidae), F. Correa, C. L. T. Silva, A. P. Pelosi, A. C. S. Almeida, E. A. Heinrichs, J. A. F. Barrigossi, F. G. Jesus

Department of Entomology: Faculty Publications

Rice (Oryza sativa L.) is considered one of the most important crops in the world, and the sugarcane borer, Diatraea saccharalis Fabricius (Lepidoptera: Crambidae), is among the key pests damaging the crop in the Americas. The objective of this work was to identify rice genotypes as a source of resistance to D. saccharalis. Rice plants were infested in the greenhouse and subsequently evaluated for damage, larval weight and survival, and stem size. The cultivars “Bonança,” “Caripuna,” “IR 42,” “Canela de Ferro,” “SWA Norte,” “BR IRGA 409,” “Pepita,” “Serra Dourada,” “Araguaia,” “Xingú,” “Tangará,” and “Soberana” showed antibiosis, antixenosis, or …

Nitrogen Fertilization Elevated Spatial Heterogeneity Of Soil Microbial Biomass Carbon And Nitrogen In Switchgrass And Gamagrass Croplands, Jianwei Li, Chunlan Guo, Siyang Jian, Qi Deng, Chih-Li Yu, Kudjo E. Dzantor, Dafeng Hui

Agricultural and Environmental Sciences Faculty Research

The effects of intensive nitrogen (N) fertilizations on spatial distributions of soil microbes in bioenergy croplands remain unknown. To quantify N fertilization effect on spatial heterogeneity of soil microbial biomass carbon (MBC) and N (MBN), we sampled top mineral horizon soils (0-15 cm) using a spatially explicit design within two 15-m2 plots under three fertilization treatments in two bioenergy croplands in a three-year long fertilization experiment in Middle Tennessee, USA. The three fertilization treatments were no N input (NN), low N input (LN: 84 kg N ha−1 in urea) and high N input (HN: 168 kg N ha−1 in urea). …

Integrating Management Zones And Canopy Sensing To Improve Nitrogen Recommendation Algorithms, Joel D. Crowther

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Fertilizer nitrogen use efficiency (NUE) in maize (Zea mays L.) production is historically inefficient, presenting significant environmental and economic challenges. Low NUE can be attributed to poor synchrony between soil N supply and crop demand, applying uniform rates of N fertilizer to spatially variable landscapes, and failure to account for temporal variability in crop response to N. Innovative N management strategies, including crop canopy sensing and management zones (MZ), are tools that have proven useful in increasing NUE. Several researchers have proposed that the integration of these two approaches may result in further improvements in NUE and in profitability …

Warming Deferentially Altered Multidimensional Soil Legacy Induced By Past Land Use History, Weiling Dong, Alin Song, Xueduan Liu, Bing Yu, Boren Wang, Yuqiu Lu, Yanling Li, Huaqun Yin, Jianwei Li, Fenliang Fan

Agricultural and Environmental Sciences Faculty Research

The legacy effects of previous land use and climate history may affect current soil function. However, the manner in which these legacy effects of land use are modulated by the subsequent climate remains unclear. For this reason, we investigated how the legacies of soil multiple functions left by conversion of grassland to agricultural management were mediated by climate warming with a reciprocal transplant approach. The overall legacy was further separated into the contributions by changes in the abiotic properties of the soil (abiotic process) and microbial community (biotic process). We here hypothesized that warming may mediate the legacy effects of …

Cover Crops And Fertilization Alter Nitrogen Loss In Organic And Conventional Conservation Agriculture Systems, Rebecca E. Shelton, Krista L. Jacobsen, Rebecca L. Mcculley

Horticulture Faculty Publications

Agroecosystem nitrogen (N) loss produces greenhouse gases, induces eutrophication, and is costly for farmers; therefore, conservation agricultural management practices aimed at reducing N loss are increasingly adopted. However, the ecosystem consequences of these practices have not been well-studied. We quantified N loss via leaching, NH₃ volatilization, N₂O emissions, and N retention in plant and soil pools of corn conservation agroecosystems in Kentucky, USA. Three systems were evaluated: (1) an unfertilized, organic system with cover crops hairy vetch (Vicia villosa), winter wheat (Triticum aestivum), or a mix of the two (bi-culture); (2) an organic …

Overlapping Residual Herbicides For Control Of Photosystem (Ps) Ii- And 4-Hydroxyphenylpyruvate Dioxygenase (Hppd)-Inhibitor-Resistant Palmer Amaranth (Amaranthus Palmeri S. Watson) In Glyphosate-Resistant Maize, Parminder S. Chahal, Zahoor Ahmad Ganie, Amit J. Jhala

Department of Agronomy and Horticulture: Faculty Publications

A Palmer amaranth (Amaranthus palmeri S. Watson) biotype has evolved resistance to photosystem (PS) II- (atrazine) and 4-hydroxyphenylpyruvate dioxygenase (HPPD)-inhibiting herbicides (mesotrione, tembotrione, and topramezone) in maize seed production field in Nebraska, USA. The objectives of this study were to determine the effect of soil residual pre-emergence (PRE) herbicides followed by (fb) tank-mixture of residual and foliar active post-emergence (POST) herbicides on PS-II- and HPPD-inhibitor-resistant Palmer amaranth control, maize yield, and net economic returns. Field experiments were conducted in a grower’s field infested with PS II- and HPPD-inhibitor-resistant Palmer amaranth near Shickley in Fillmore County, Nebraska, USA in 2015 …

Gene Flow From Single And Stacked Herbicide-Resistant Rice (Oryza Sativa): Modeling Occurrence Of Multiple Herbicide-Resistant Weedy Rice, Joseph Dauer, Andrew Hulting, Dale Carlson, Luke Mankin, John Harden, Carol Mallory-Smith

School of Natural Resources: Faculty Publications

Background: Provisia™ rice (PV), a non-genetically engineered (GE) quizalofop-resistant rice, will provide growers with an additional option for weed management to use in conjunction with Clearfield® rice (CL) production. Modeling compared the impact of stacking resistance traits versus single traits in rice on introgression of the resistance trait to weedy rice (also called red rice). Common weed management practices were applied to 2-, 3- and 4-year crop rotations, and resistant and multiple-resistant weedy rice seeds, seedlings and mature plants were tracked for 15 years.

Results: Two-year crop rotations resulted in resistant weedy rice after 2 years with abundant populations (exceeding …

Propelled Abrasive Grit For Weed Control In Organic Silage Corn, Mauricio Erazo-Barradas, Fran Forcella, Dan Humburg

Agronomy, Horticulture and Plant Science Faculty Publications

Weed management in organic farming requires many strategies to accomplish acceptable control and maintain crop yields. This 2-yr field study used air propelled abrasive grit for in-row weed control in organically certified silage corn (Zea mays L.). Corncob grit was applied as a single application at corn vegetative growth stages V1 (one true leaf; numbers correspond to number of true leaves at the corn vegetative stage), V3, or V5 (in 2013) and V3, V5, and V7 (in 2014) and in double and triple combinations at these stages. Between-row weed control was accomplished by flaming or cultivation after the last grit …

Chitosan Biopolymer Promotes Yield And Stimulates Accumulation Of Antioxidants In Strawberry Fruit, Mosaddiqur Rahman, Julakha Akter Mukta, Abdullah As Sabir, Dipall Rani Gupta, Mohammed Mohi-Ud-Din, Mirza Hasanuzzaman, Md. Giashuddin Miah, Mahfuzur Rahman, Md Tofazzai Islam

Faculty & Staff Scholarship

Strawberry is a well-known source of natural antioxidants with excellent free radical scav- enging capacity. This study determined the effects of chitosan application in field condition on plant growth, fruit yield and antioxidant activities in strawberry fruit. Foliar applications of chitosan on strawberry significantly increased plant growth and fruit yield (up to 42% higher) compared to untreated control. Increased fruit yield was attributed to higher plant growth, individual fruit weight and total fruit weight/plant due to the chitosan application. Surprisingly, the fruit from plants sprayed with chitosan also had significantly higher contents (up to 2.6- fold) of carotenoids, anthocyanins, flavonoids …

Targeted Metabolomic And Transcriptomic Analyses Of “Red Russian” Kale (Brassicae Napus Var. Pabularia) Following Methyl Jasmonate Treatment And Larval Infestation By The Cabbage Looper (Trichoplusia Ni Hübner), Yu-Chun Chiu, John A. Juvik, Kang-Mo Ku

Faculty & Staff Scholarship

Methyl jasmonate (MeJA), synthesized in the jasmonic acid (JA) pathway, has been found to upregulate glucosinolate (GS) biosynthesis in plant species of the Brassicaceae family. Exogenous application of MeJA has shown to increase tissue GS concentrations and the formation of myrosinase-mediated GS hydrolysis products (GSHPs). In vitro and in vivo assays have demonstrated the potential health-promoting effects of certain GSHPs. MeJA is also known to elicit and induce genes associated with defense mechanisms to insect herbivory in Brassica species. To investigate the relationship between MeJA-induced GS biosynthesis and insect defense, three treatments were applied to “Red Russian” kale (Brassicae napus …

Surface And Subsurface Tillage Effects On Mine Soil Properties And Vegetative Response, H. Z. Angel, Jeremy Stovall, Hans Michael Williams, Kenneth W. Farrish, Brian P. Oswald, J. L. Young

Faculty Publications

Soil compaction is an important concern for surface mine operations that require heavy equipment for land reclamation. Excessive use of rubber-tired equipment, such as scraper pans, may cause mine soil compaction and hinder the success of revegetation efforts. However, information is limited on management strategies for ameliorating the potential compacting effects of scraper pans, particularly during site preparation for loblolly pine (Pinus taeda L.) plantations. Three forms of tillage and one control were replicated five times on surface mined land in the west Gulf Coastal Plain: no tillage (NT), disking (D), single-ripping + disking (R+D), and cross-ripping + disking …

New For Discovery: Scholarworks@Uark, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Discovery: The Student Journal Of Dale Bumpers College Of Agricultural, Food And Life Sciences - Volume 19 2018, Several Authors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

A Message From The Department Head Of Horticulture And Food Science, Wayne Mackey

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Nebraska Grazing Conference Proceedings, 2018, Center For Grassland Studies, University Of Nebraska-Lincoln

Nebraska Grazing Conference Proceedings

Pasture Monitoring Sesion

Overview of Choquette Ranch by Jim Choquette

Field Applications of Pasture and Ecological Monitoring by Christine Su

Keeping Human Knowledge at the Center of Technology by Christine Su

Field Monitoring Exercise with Christine Su, Jim O’Rourke, Bethany Johnston, Brad Schick, Brent Plugge, Ben Beckman, and Jace Stott

Prescribed Fire, Bird Monitoring, and Butterfly Date by Andrew Pierson

Strategies for Rangeland Monitoring by Jim O’Rourke

Pasture Monitoring: Field Experience by Jeff Nichols, Beau Mathewson, and Mitch Stephenson

Ranch Succession Planning Session

Keeping Your Ranching Operation in the Family for Future Generations by Ron Hanson

Sharing Our Ranch Succession …

Optimising The Identification Of Causal Variants Across Varying Genetic Architectures In Crops, Chenyong Miao, Jinliang Yang, James C. Schnable

Department of Agronomy and Horticulture: Faculty Publications

Association studies use statistical links between genetic markers and the phenotype variation across many individuals to identify genes controlling variation in the target phenotype. However, this approach, particularly conducted on a genome-wide scale (GWAS), has limited power to identify the genes responsible for variation in traits controlled by complex genetic architectures. In this study, we employ real-world genotype datasets from four crop species with distinct minor allele frequency distributions, population structures and linkage disequilibrium patterns. We demonstrate that different GWAS statistical approaches provide favourable trade-offs between power and accuracy for traits controlled by different types of genetic architectures. FarmCPU provides …

Transcriptional Reprogramming Of Legume Genomes: Perspective And Challenges Associated With Single-Cell And Single Cell-Type Approaches During Nodule Development, Marc Libault

Department of Agronomy and Horticulture: Faculty Publications

Transcriptomic approaches revealed thousands of genes differentially or specifically expressed during nodulation, a biological process resulting from the symbiosis between leguminous plant roots and rhizobia, atmospheric nitrogen-fixing symbiotic bacteria. Ultimately, nodulation will lead to the development of a new root organ, the nodule. Through functional genomic studies, plant transcriptomes have been used by scientists to reveal plant genes potentially controlling nodulation. However, it is important to acknowledge that the physiology, transcriptomic programs, and biochemical properties of the plant cells involved in nodulation are continuously regulated. They also differ between the different cell-types composing the nodules. To generate a more accurate …

First Case Of Glufosinate-Resistant Rigid Ryegrass (Lolium Rigidum Gaud.) In Greece, Ilias S. Travlos, Nikolina Cheimona, Rafael De Prado, Amit J. Jhala, Demosthenis Chachalis, Eleni Tani

Department of Agronomy and Horticulture: Faculty Publications

Repeated applications of the same herbicide(s), which are characterized by the same mode of action, increase selection pressure, which in turn favours the evolution of herbicide-resistant weeds. Glufosinate is a broad-spectrum non-selective herbicide being used for weed control for many years around the world. Rigid ryegrass (Lolium rigidum Gaud.) is an economically important grass weed in Greece. Recent complaints by growers about control failure of rigid ryegrass with glufosinate require further investigation and have been the basis of this study. The objectives of this study were to confirm the existence of glufosinate-resistant L. rigidum in Greece and evaluate the …

Empowerment And Tech Adoption: Introducing The Treadle Pump Triggers Farmers’ Innovation In Eastern Ethiopia, Shimelis Beyene, Teshome H. Regassa, Belaineh Legesse, Martha Mamo, Tsegaye Tadesse

Department of Agronomy and Horticulture: Faculty Publications

In 2013, thirty-eight treadle pumps (TPs) were installed as low-cost technology introduction for small-scale irrigation in eastern Ethiopia. This pilot project also trained six farmers on tube well excavation, as well as the installation and maintenance of pumps. In June 2015, researchers visited nine of the thirty-eight TP villages and found only two TPs functioning as originally installed. The rest were replaced with a new technology developed by the trained farmers. Farmers, empowered by training, gained more control in developing technology options tailored to local needs and conditions of their communities. Adopters of the new technology stated that the limited …