Agronomy and Crop Sciences Commons^™

Understanding The Factors Affecting Microbiological Quality Of Wheat Milled Products: From Wheat Fields To Milling Operations, Luis E. Sabillón Galeas

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Although regarded as a low-risk commodity, wheat flour-based mixes have been implicated in several food safety incidents. The present thesis is a compilation of five scientific manuscripts on the effect of weather variation, milling steps and implementation of pre-milling interventions on the microbiological quality and safety of wheat and milled products. The first manuscript is a review of the microbiological quality and safety of wheat-based products. Despite the low water activity, wheat flour may harbor dormant but viable microorganisms, which could lead to safety concerns when flour is used to produce refrigerated dough products. The second manuscript illustrates the effect …

Spatial And Temporal Distribution Of Fungicides Applied To Creeping Bentgrass, Kurt Ronald Hockemeyer

Open Access Theses

Turf managers often rely on fungicides to limit damage caused by root diseases. Since fungicides do not move basipetally, they are effective only when fungitoxic concentrations are delivered to the rhizosphere. This research focused on the distribution of modern fungicides in verdure, thatch, sand, and roots of creeping bentgrass (Agrostis stolonifera L. var. palustris (Huds.) Farw.) maintained as a putting green. Fungicides (azoxystrobin (methyl (E)-2-[2-[6-(2-cyanophenoxy)pyrimidin-4-yloxy]phenyl]-3-methoxyacrylate), propiconazole (1,2,4-Triazole, 1-((2-(2,4-dichlorophenyl)-4-propyl-1,3-dioxolan-2-yl)methyl), pyraclostrobin (carbamic acid, [2-[[[1-(4-chlorophenyl)-1H-pyrazol-3-yl]oxy]methyl]phenyl]methoxy-,methyl ester), and thiophanate-methyl (dimethyl 4,4'-o-phenylenebis[3-thioallophanate]) were applied to replicate field plots in a water volume of 815 L ha-1. Plots were sampled over time (0, 3, 7, 10, …

Management Of Root Knot Nematode (Meloidogyne Incognita ) In Indiana Soybeans, David Edgardo Perla Martinez

Open Access Theses

The aim of this project was to evaluate different strategies for management of Root Knot Nematode (RKN) on soybean and tomato in Indiana. Seed treatments were evaluated under field and greenhouse conditions, but no effect on RKN populations was observed. Soybean lines evaluated for resistance to RKN under greenhouse conditions showed that six lines may be resistant to RKN. Four different commercial mustard cover crops were evaluated for their bio-fumigant impact on RKN populations in the production of tomato. Euruca sativa, Cv. Nemat was a poor host of RKN. A positive impact on the vigor of the tomato plants followed …

Ems Induced Mutations In Dhurrin Metabolism And Their Impacts On Sorghum Growth And Development, Jenae Lavon Skelton

Open Access Theses

Sorghum is the fifth most important grain crop in the world. It is a staple food, feed, and silage crop in many developing countries in the semi-arid tropics. One factor that can impact sorghum forage quality is dhurrin content. Dhurrin is a cyanogenic glucoside naturally produced in the plant. When tissues containing dhurrin are crushed, hydrogen cyanide (HCN) is released during dhurrin decomposition. HCN is toxic to humans and livestock. While there is natural genetic diversity for the concentration of dhurrin within sorghum lines, there have been no naturally occurring dhurrin-free genotypes identified to date. ^ We have identified ethyl …

Fact Or Fiction: Random Mating In Field Populations Of Western Corn Rootworm (Diabrotica Virgifera Virgifera Leconte) Emerging On Bt And Refuge Corn Plants, Steven Joel Smith

Open Access Theses

The western corn rootworm, or WCR, (Diabrotica virgifera virgifera LeConte) is the most significant pest of field corn (Zea mays) in the United States, and has recently expanded its range into Europe. Since 2004, hybrid corn containing Bt toxins targeting the corn rootworm complex have been heavily adopted and are now the primary control measure for this pest in North American corn production. ^ The evolution of resistance is an ongoing concern, and to ensure Bt products will retain their usefulness, insect resistance management (IRM) tactics using various refuge structures have been adopted. One of the key …

Agronomic And Genetic Characterization Of Aluminum Tolerance In A Recombinant Inbred Population Of Sorghum [Sorghum Bicolor (L.) Moench], Amanda Christine Easterly

Open Access Theses

Acid soils are estimated to cover up to 30% of arable soils globally and lead to significant limitations on agricultural productivity, primarily through aluminum toxicity. In sorghum [Sorghum bicolor (L.) Moench], significant genetic variation exists for tolerance to phytotoxic species of aluminum; tolerance is conferred through the exudation of citrate at the root tip, binding aluminum in the soil rhizosphere. A gene in the multidrug and toxic compound extrusion (MATE) family is the primary tolerance locus in sorghum. The purpose of this research was to evaluate a recombinant inbred line (RIL) population of sorghum segregating for SbMATE to establish …

Managing Swine Manure In Double-Crop Soybean, Donald Joseph Graper

Open Access Theses

Animal production, especially swine (Sus scrofa domesticus ) and poultry, has increased in the United States prompting the need to manage the larger volume of manure beyond land applications to supply nitrogen (N) for corn (Zea mays ) production. Applying swine manure to soybean (Glycine max ) has been shown to increase grain yield due to N supply. The goal of this research was to determine if swine manure applications to double-crop soybean following wheat can limit manure N loading to the soil by extending management options, increase soybean biomass and grain production, and increase N removal …

Genome Sequence Of The Listia Angolensis Microsymbiont Microvirga Lotononidis Strain Wsm3557ᵀ, Wayne Reeve, Julie Kaye Ardley, Rui Tian, Sofie E. De Meyer, Jason Terpolilli, Vanessa Melino, Ravi P. Tiwari, Ronald J. Yates, Graham William O'Hara, John Gregory Howieson, Mohamed Ninawi, Xiaojing Zhang, David Bruce, Chris Detter, Roxanne Tapia, Cliff Han, Chia-Lin Wei, Marcel Huntemann, James Han, I-Min Chen, Konstantinos Mavromatis, Victor Markowitz, Ernest Szeto, Natalia Ivanova, Ioanna Pagani, Amrita Pati, Lynne Goodwin, Tanja Woyke, Nikos Kyrpides

Grain and Other Field Crops Research Articles

Microvirga lotononidis is a recently described species of root-nodule bacteria that is an effective nitrogen- (N2) fixing microsymbiont of the symbiotically specific African legume Listia angolensis (Welw. ex Bak.) B.-E. van Wyk & Boatwr. M. lotononidis possesses several properties that are unusual in root-nodule bacteria, including pigmentation and the ability to grow at temperatures of up to 45°C. Strain WSM3557T is an aerobic, motile, Gram-negative, non-spore-forming rod isolated from a L. angolensis root nodule collected in Chipata, Zambia in 1963. This is the first report of a complete genome sequence for the genus Microvirga. Here we describe the features …

Genome Sequence Of Rhizobium Leguminosarum Bv Trifolii Strain Wsm1689, The Microsymbiont Of The One Flowered Clover Trifolium Uniflorum, Jason Terpolilli, Tian Rui, Ronald J. Yates, John Gregory Howieson, Philip Poole, Christine Munk, Roxanne Tapia, Cliff Han, Victor Markowitz, Reddy Tatiparthi, Konstantinos Mavromatis, Natalia Ivanova, Amrita Pati, Lynne Goodwin, Tanja Woyke, Nikos Kyrpides, Wayne Reeve

Grain and Other Field Crops Research Articles

Rhizobium leguminosarum bv. trifolii is a soil-inhabiting bacterium that has the capacity to be an effective N2-fixing microsymbiont of Trifolium (clover) species. R. leguminosarum bv. trifolii strain WSM1689 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Trifolium uniflorum collected on the edge of a valley 6 km from Eggares on the Greek Island of Naxos. Although WSM1689 is capable of highly effective N2-fixation with T. uniflorum, it is either unable to nodulate or unable to fix N2 with a wide range of both perennial and annual clovers originating from Europe, North America …

Development Of Genetic Ssr Markers In Blumeria Graminis F. Sp. Hordei And Application To Isolates From Australia, Madeline Tucker, C S. Moffat, Simon R. Ellwood, K C. Tan, Kithsiri Jayasena, Richard P. Oliver

Biosecurity Research Articles

The barley powdery mildew pathogen, Blumeria graminis f. sp. hordei (Bgh), exists in numerous haplotypes and displays significant differences in fungicide sensitivity. It causes considerable yield losses throughout the world. Microsatellite SSRs are useful tools to study the population level and biogeographic aspects of intraspecific diversity, but so far none have been defined for Bgh. Here, eight polymorphic microsatellite loci were identified and characterized. Primer pairs amplifying the loci were then applied to 111 isolates of Bgh from Australia. The number of alleles per locus ranged from 4 to 13, and Nei's genetic diversity ranged from 0·25 to 0·76. The …

The Effect Of Increasing Rates Of Biochar On Corn Grown In Salinas Clay Loam, Joshua Fridlund

Agricultural Education and Communication

In order to sustain the ever growing global population, agriculture needs to not only increase yields but to increase yields in a way that is sustainable and is either environmentally neutral or has a positive effect on the environment. Biochar offers a solution to this challenge with numerous environmental benefits, as well as agricultural benefits (Lehman and Joseph 2009). The agricultural benefits of biochar have been well documented in tropical climates, with the benefits of biochar for other climates, such as temperate climates and Mediterranean climates, relatively unknown (Blackwell et. al. 2009). To determine the effect of biochar on agricultural …

Grazing Method Effects On Forage Production, Utilization, And Animal Performance On Nebraska Sandhills Meadow, Miles D. Redden

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Mob grazing using ultrahigh stocking densities is promoted as a tool to increase the health and productivity of grasslands by increasing nutrient cycling and soil organic matter. Mob grazing can be defined as a strategy in which area available to grazing animals is restricted to achieve stocking densities of 200,000 kg/ha or greater. Objectives were to determine herbage production, utilization, and cattle weight gains among ultrahigh stocking density grazing and more conventional grazing methods on a Sandhills subirrigated meadow. Treatments included two replications of each of the following: four-pasture rotational grazing with two occupations per pasture in an 80-day grazing …

Synthesis Of The Effect Of Fire On Lesser Prairie‐Chickens, Eric Thacker, Dirac L. Twidwell Jr

Department of Agronomy and Horticulture: Faculty Publications

In this synthesis, we reviewed the scientific literature pertaining to the effects of fire on lesser prairie‐chickens and their habitat. Overall, research is generally lacking that directly assesses relationships among fire, both as a regime and a discrete event, to its effect on lesser prairie‐chicken behavior and habitat value. Yet, research has quantified the effects of fire on vegetation throughout the distribution of the lesser prairie‐chicken, which has been linked to known metrics of habitat value and broad landscape‐level habitat requirements.

To summarize the literature, lesser prairie‐chickens require broad landscapes of fire‐dependent grass‐shrub vegetation. Changes in the eco‐evolutionary fire regime …

Garlic Variety Trial 2014, Rebecca Brown, Noah Leclaire-Conway

University of Rhode Island Vegetable Production Research Reports

Based on the 2012-13 results, soft neck garlic is a viable crop for southern New England. The best varieties did as well as the best hard neck varieties. For both types of garlic approximately ¼ of the bulbs were culled because of insufficient size. The cause of the small bulbs is unclear; they may have been due to competition from the oats that failed to winter kill, or they may have been because the planting stock had not adapted to our conditions. Bulb rot is more of a problem with soft neck garlic, but appears to be controllable with careful …

Effect Of Sulfur Amendments On Yield And Quality In Alliums, Rebecca Brown, Noah Leclaire-Conway

University of Rhode Island Vegetable Production Research Reports

In conclusion, sulfur fertilization appears to offer little or no benefit for allium vegetables in Rhode Island. Variety differences were much greater than the fertility effects, and growers who are experiencing issues with yield and storage life are encouraged to consider switching to better varieties.

Leek Variety Trial 2014, Rebecca Brown, Noah Leclaire-Conway

University of Rhode Island Vegetable Production Research Reports

Megaton was an excellent performer for yield both years, with strong establishment and uniformly large leeks. DP-12-02 and Tadorna also did well both years; moderate yields are due to the smaller size of these leeks relative to Megaton. DP-12-02 is a very tall, thin, green leek that is well suited to bunching sales in late summer and early fall, but loses quality when harvested late. Tadorna and Autumn Giant were the most winter hardy, and were generally good performers except for a tendency to variable size and a high percentage of unmarketably small leeks. Rally was only tested in 2013 …

Onion Variety Trial 2014, Rebecca Brown, Noah Leclaire-Conway

University of Rhode Island Vegetable Production Research Reports

In 2012 we trialed 18 yellow storage onion varieties, three red onion varieties, and one sweet onion. The 2013 trial included 17 yellow storage onion varieties, 3 sweet yellow onion varieties, one sweet white variety, and 7 red onion varieties. The onion varieties were evaluated for yield, quality, storability, and suitability to plasticulture. All of the onions were started from seed in the greenhouse and transplanted into raised beds covered with plastic mulch. In 2012 transplanting took place on April 13 and beds were covered with conventional plastic mulch. In 2013 transplanting took place on April 30 and beds were …

Economic Contribution Of Agriculture And Food To Arkansas' Gross Domestic Product 1997-2011, Jacob Manlove, Leah English, Jennie Popp, Wayne Miller

AAES Research Reports and Research Bulletins

Agricultural production, processing, and retail industries are major contributors to the Arkansas economy in terms of GDP. Agriculture contributes to the economy through direct agricultural production, value-added processing, and agricultural retail activities, and it also plays an important role through its interactions with other sectors. The use of non-agricultural goods and services as inputs into the agricultural sector promotes diversified growth in Arkansas’ economy; thus agriculture remains a vital part of Arkansas’ economy. Part 1 of the report compares the relative size of the Agriculture and Food Sector in Arkansas with those of neighboring states, the Southeastern region of the …

Palatability Of Teff Grass By Horses, Rachel R. Cummins

Animal Science Undergraduate Honors Theses

Most forages commonly used to feed horses have potential detriments including blister beetles or excessive fiber concentrations. Teff grass (T), a warm-season annual forage, has the potential to be a good alternative for horses because of its lack of observed disorders. Our objective was to compare preference by horses for T harvested under different conditions with that of bermudagrass (B) harvested at two maturities. Six different forages were evaluated: T harvested at the late vegetative stage (TLV), at late bloom but that incurred 33 mm of rainfall between mowing and baling (TLBR), with caryopsis visible (TES), or at soft dough …

Relationship Between 1,3-Dichloropropene And Nitrogen Fertility In Cotton In The Presence Of Root-Knot And Reniform Nematodes, Amanda Michelle Greer

Graduate Theses and Dissertations

The use of soil fumigation for nematode management in cotton (Gossypium hirsutum) has become increasingly popular in recent years in the absence of effective resistant cultivars. While soil fumigation is relatively expensive, lint yields have consistently been improved to make this practice profitable in fields with severe nematode pressure. Growers in southern Arkansas have observed changes in cotton growth patterns when severely infested fields are fumigated. The most noticeable change has been excessive (rank) growth resulting in an increased need for growth regulators, especially where the nitrogen fertilization exceeds standard recommendations. Field studies were conducted between 2007 and 2010 to …

Drivers Of Spatial And Temporal Variation In Soybean Yield And Irrigation Requirements In The Western Us Corn Belt, Patricio Grassini, Jessica A. Torrion, Kenneth Cassman, Haishun Yang, James Specht

Department of Agronomy and Horticulture: Faculty Publications

Both rainfed and irrigated soybean production are important in Nebraska (western US Corn Belt), accounting for a respective 48 and 52% of the state’s soybean production of 7 Mt on a respective 55 and 45% share of the state soybean area of 1.9 Mha. To date, no assessment of factors that may account for regional and inter-annual variation in yield and irrigation amount has been performed. To accomplish that objective, we evaluated a database containing on-farm field yields and total irrigation amount used in those fields. These data have been collected annually from ca. 1000 soybean fields in six regions …

Population Dynamics Of Triticum Mosaic Virus In Various Host Species, Melissa S. Bartels

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

It has been established that RNA viruses should be genetically diverse, due to the high error rate of their RNA-dependent RNA polymerases and the lack of proof-reading capabilities. Plant RNA viruses are not as genetically diverse as expected. Evolutionary factors, such as purifying selection and bottlenecks that favor genetic stability, might be affecting plant viral populations. Otherwise RNA virus populations, with their potential for extreme diversity, might acquire a lethal number of mutations leading to the collapse of the population.

Triticum mosaic virus (TriMV) populations maintained in a controlled greenhouse environment displayed genetic stability. The mutation frequency per nucleotide of …

A Regional Investigation Of In-Season Nitrogen Requirement For Maize Using Model And Sensor-Based Recommendation Approaches, Laura Joy Stevens

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

N management for corn can be improved by applying a portion of the total N during the growing season, allowing for adjustments responsive to actual field conditions. This study was conducted to evaluate two approaches for determining in-season N rates: Maize-N model and active crop canopy sensor. Various sensor algorithms designed for making in-season N recommendations from crop canopy sensor data were evaluated. The effects of corn hybrid and planting population on recommendations with these two approaches were considered. In a 2-yr study, a total of twelve sites were evaluated over a 3-state region, including sites in Missouri, Nebraska, and …

Spreading The Char: The Importance Of Local Compatibility In The Diffusion Of Biochar Systems To The Smallholder Agriculture Community Context, Laura C. V. Munoz

Pomona Senior Theses

This thesis enters the context of smallholder agriculture communities in the developing world. It explores the potentials of biochar and what biochar systems could bring to the smallholder communities while simultaneously bringing environmental benefits. It then acknowledges the challenges of diffusion –the spreading of an unfamiliar innovation. It seeks to answer the question of what will make diffusion of biochar systems more successful in the smallholder context, fixating on the characteristic of compatibility as well as the role local community members can play in making a new biochar system more visible to the rest of the communities.

Stacking Of A Stearoyl-Acp Thioesterase With A Dual-Silenced Palmitoyl-Acp Thioesterase And Δ12 Fatty Acid Desaturase In Transgenic Soybean, Hyunwoo Park, George L. Graef, Yixiang Xu, Patrick Tenopir, Thomas E. Clemente

Department of Agronomy and Horticulture: Faculty Publications

Soybean (Glycine max (L.) Merr) is valued for both its protein and oil, whose seed is composed of 40% and 20% of each component, respectively. Given its high percentage of polyunsaturated fatty acids, linoleic acid and linolenic acid, soybean oil oxidative stability is relatively poor. Historically food processors have employed a partial hydrogenation process to soybean oil as a means to improve both the oxidative stability and functionality in end-use applications. However, the hydrogenation process leads to the formation of trans-fats, which are associated with negative cardiovascular health. As a means to circumvent the need for the hydrogenation process, genetic …

Fungicide Resistance In Botrytis Cinerea From Strawberry - Molecular Mechanisms And Management, Anja Grabke

All Theses

The United States is the largest producer of strawberries worldwide, generating approximately $2.4 billion worth of fruit each year. Strawberry production, however, is often threatened by pathogens. One of the most destructive fungal pathogens is Botrytis cinerea, the causal agent of gray mold disease. The control of gray mold in commercial fields is largely dependent on the application of fungicides, including the dicarboximide iprodione and the hydroxyanilide fenhexamid. Because both fungicides are prone to resistance development, a survey was conducted to determine the occurrence and prevalence of fungicide resistance. Single-spore isolates were collected from strawberry fields in Florida (for …

Efficacy Of Rice Insecticide Seed Treatments At Selected Nitrogen Rates For Control Of The Rice Water Weevil, Lissorhoptrus Oryzophilus Kuschel, Mallory Elise Everett

Graduate Theses and Dissertations

Seed-applied insecticides are the standard control method used to prevent rice water weevil (Lissorhoptrus oryzophilus Kuschel) injury to rice (Oryza sativa L.) roots, and often results in greater yields than rice that receives no seed-applied insecticide. Yield increases from seed-applied insecticides often occur even when insect pressure is low and should not cause yield loss. The research objective was to evaluate the effect of urea-nitrogen rate and seed-applied insecticide on number of rice water weevil larvae, nitrogen uptake and rice grain yield. Six trials were conducted at the Pine Tree Research Station (PTRS) and the Rice Research Extension Center (RREC) …

Milling And Functional Properties Of Co-Mingled Rice Cultivars, Nikhil N. Basutkar

Graduate Theses and Dissertations

Differences have been observed in the milling and functional properties of different rice cultivars, particularly between hybrid and pureline cultivars. Co-mingling of rice cultivars commonly occurs during harvest, storage and drying operations. Thus, there is a need to study the effect of co-mingling on the milling and functional properties of rice cultivars. Two long-grain, hybrid (H) cultivars CL XL745 and CL XL729 and two long-grain, pureline (P) cultivars CL 151 and Wells were used to prepare CL XL745/CL 151 (H/P), CL XL745/CL XL729 (H/H) and Wells/CL 151 (P/P) co-mingles, mixed in various proportions. Milled rice yield (MRY), head rice yield …

Estimating Nitrogen Credits From Poultry Litter On Silt Loam Soils In Arkansas Using The Nitrogen-Soil Test For Rice: N-Star, Chester Eugene Greub

Graduate Theses and Dissertations

Rice (Oryza sativa L.) is one of the most important global cereal crops and is grown on a substantial number of hectares in Arkansas each year. Consequently, Arkansas is the leading rice producing state in the United States accounting for almost half of domestic production. The development and release of N-STaR (Nitrogen-Soil Test for Rice) allows producers to predict site-specific N fertilizer needs for rice production in Arkansas, with N-STaR being a predictor of potentially mineralizable-N. Furthermore, poultry production is a thriving commodity in Arkansas, producing a substantial amount of poultry litter (PL) annually. Rice producers are applying PL to …

Fertilizer Nitrogen Uptake Efficiency In Soft Red Winter Wheat And The Ability Of N-Star To Detect Alkaline Hydrolyzable Nitrogen In Crop Residues, Lana Aubrey Clark

Graduate Theses and Dissertations

Soil testing methods such as the Illinois Soil Nitrogen Test (ISNT) and Direct Steam Distillation (DSD) have been developed which measure alkaline hydrolyzable-N (AH-N) as a means of estimating potentially mineralizable-N. Crop residues play an important role in N cycling. However, the ability of the ISNT and DSD methods to determine AH-N within crop residues is unknown. Therefore, the first objective of this study was to determine the ability of the ISNT and DSD to quantify potentially mineralizable-N within five different crop residues common to Arkansas. Corn (Zea mays L.), soybean (Glycine max, L.), wheat, rice (Oryza sativa, L.), and …