Agronomy and Crop Sciences Commons^™

Industrial Hemp As A Resource For Birds In Agroecosystems: Human–Wildlife Conflict Or Conservation Opportunity?, Emily A. Kotten, Iona Hennessy, Bryan M. Kluever, Zachary T. Brym, Bradley F. Blackwell, Lee A. Humberg, Page E. Klug

Human–Wildlife Interactions

Industrial hemp (Cannabis sativa L.; hemp) is an emerging crop in the United States with little known about bird use or the potential for birds to become an agricultural pest. We identified birds associated with hemp fields, using repeated visits to oilseed plots in North Dakota, USA (n = 6) and cannabinoid (CBD) plots in Florida, USA (n = 4) from August to November 2020. We did not control for plot area or density; our observations were descriptive only. We observed 10 species in hemp, 12 species flying over hemp, and 11 species both foraging in and …

Remote Sensing For Quantifying C3 And C4 Grass Ratios In Pastures, Jordyn Alyssa Bush

Theses and Dissertations--Plant and Soil Sciences

The following studies investigate the accuracy and practicality of exploiting the color dichotomy present between C₃ and C₄ grass species to estimate their respective proportions from drone or camera captured imagery. Understanding the proportions of C₃ and C₄ grasses in pastures is vital to sound decision making for livestock production. The ability to monitor these proportions remotely will also allow for large scale monitoring as well as detection of changes in botanical composition over time and in response to weather events, management, or climate change. A free green canopy cover (GCC) analyzing software, Canopeo, was used …

First Plant Cell Atlas Symposium Report, Selena L. Rice, Elena Lazarus, Christopher Anderton, Kenneth Birnbaum, Jenniofer Brophy, Benjamin Cole, Diane Dickel, David Ehrhardt, Noah Fahlgren, Margaret Frank, Elizabeth Haswell, Shao-Shan Carol Huang, Samuel Leiboff, Marc Libault, Marisa S. Otegui, Nicholas Provart, R. Glen Uhrig, Seung Y. Rhee, The Plant Cell Atlas Consortium

Department of Agronomy and Horticulture: Faculty Publications

The Plant Cell Atlas (PCA) community hosted a virtual symposium on December 9 and 10, 2021 on single cell and spatial omics technologies. The conference gathered almost 500 academic, industry, and government leaders to identify the needs and directions of the PCA community and to explore how establishing a data synthesis center would address these needs and accelerate progress. This report details the presentations and discussions focused on the possibility of a data synthesis center for a PCA and the expected impacts of such a center on advancing science and technology globally. Community discussions focused on topics such as data …

A Non-Destructive Approach For Measuring Rice Panicle-Level Photosynthetic Responses Using 3d-Image Reconstruction, Jaspinder Singh Dharni, Balpreet Kaur Dhatt, Puneet Paul, Tian Gao, Tala Awada, Paul Staswick, Jason Hupp, Hongfeng Yu, Harkamal Walia

Department of Agronomy and Horticulture: Faculty Publications

Our understanding of the physiological response of rice inflorescence (panicle) to environmental stresses is limited by the challenge of accurately determining panicle photosynthetic parameters and their impact on grain yield. This is primarily due to lack of a suitable gas exchange methodology for panicles, as well as non-destructive methods to accurately determine panicle surface area. To address these challenges, we have developed a custom panicle gas exchange cylinder compatible with the LiCor 6800 Infra-red Gas Analyzer. Accurate surface area measurements were determined with a 3D panicle imaging platform to normalize the panicle-level photosynthetic measurements. We observed differential responses in both …

Identification Of Beneficial And Detrimental Bacteria Impacting Sorghum Responses To Drought Using Multi-Scale And Multisystem Microbiome Comparisons, Mingsheng Qi, Jeffrey C. Berry, Kira W. Veley, Lily O'Connor, Omri M. Finkel, Isai Salas-González, Molly Kuhs, Julietta Jupe, Emily Holcomb, Tijana Glavina Del Rio, Cody Creech, Peng Liu, Susannah G. Tringe, Jeffery L. Dangl, Daniel P. Schachtman, Rebecca S. Bart

Department of Agronomy and Horticulture: Faculty Publications

Drought is a major abiotic stress limiting agricultural productivity. Previous field-level experiments have demonstrated that drought decreases microbiome diversity in the root and rhizosphere. How these changes ultimately affect plant health remains elusive. Toward this end, we combined reductionist, transitional and ecological approaches, applied to the staple cereal crop sorghum to identify key root-associated microbes that robustly affect drought-stressed plant phenotypes. Fifty-three Arabidopsis-associated bacteria were applied to sorghum seeds and their effect on root growth was monitored. Two Arthrobacter strains caused root growth inhibition (RGI) in Arabidopsis and sorghum. In the context of synthetic communities, Variovorax strains were able to …

Evaluation Of Uav-Derived Multimodal Remote Sensing Data For Biomass Prediction And Drought Tolerance Assessment In Bioenergy Sorghum, Jiating Li, Daniel P. Schachtman, Cody F. Creech, Lin Wang, Yufeng Ge, Yeyin Shi

Department of Agronomy and Horticulture: Faculty Publications

Screening for drought tolerance is critical to ensure high biomass production of bioenergy sorghum in arid or semi-arid environments. The bottleneck in drought tolerance selection is the challenge of accurately predicting biomass for a large number of genotypes. Although biomass prediction by low-altitude remote sensing has been widely investigated on various crops, the performance of the predictions are not consistent, especially when applied in a breeding context with hundreds of genotypes. In some cases, biomass prediction of a large group of genotypes benefited from multimodal remote sensing data; while in other cases, the benefits were not obvious. In this study, …

Temporal Changes In The Nutrient Content Of Cattle Dung In The Nebraska Sandhills Ecosystem, Amanda Shine, Martha Mamo, Gandura O. Abagandura, Walter Schacht, Jerry Volesky

Department of Agronomy and Horticulture: Faculty Publications

Dung excreted by cattle composes a significant portion of the nutrient inputs in a grazed ecosystem and can have wide-ranging effects on soil properties and vegetation. However, little research has been conducted on the nutrient dynamics of excreted dung in situ that has not been disturbed prior to field sampling. In this study, we analyzed 294 dung pats (1–24 days old) collected from a Nebraska Sandhills meadow to determine water-extractable organic carbon (WEOC), water-extractable nitrogen (WEN), water-extractable phosphorus (WEP), and percent dry matter (DM) changes over time. In addition, we investigated if sample handling - frozen storage – and the …

Predicting Munsell Color For Turfgrass Leaves, William L. Berndt, Roch E. Gaussoin

Department of Agronomy and Horticulture: Faculty Publications

Linking turfgrass color to hue, value, chroma (H V/C) in the Munsell Plant Tissue Color Book is a visual comparison process for specifying and communicating plant color. If subjectivity of visual comparison can be mitigated, then accuracy of color matching may be improved. Research was conducted to develop an algorithm predicting H V/C from CIE-xyY color (xyY) in digital images of leaves of four turfgrasses. First, value-chroma (V/C) arrays for Munsell hue groups 5Y, 2.5GY, 5GY, 7.5GY, 10GY, and 2.5G were converted to xyY. Next, chromaticity (xy) plots from each array were fitted with …

4-Hydroxyphenylpyruvate Dioxygenase (Hppd)-Inhibiting Herbicides: Past, Present, And Future, Amit J. Jhala, Vipan Kumar, Ramawatar Yadav, Prashant Jha, Mithila Jugulam5, Martin M. Williams Ii, Nicholas E. Hausman, Franck E. Dayan, Paul M. Burton, Richard P. Dale, Jason K. Norsworthy

Department of Agronomy and Horticulture: Faculty Publications

The 4-hydroxyphenylpyruvate dioxygenase (HPPD)-inhibiting herbicides are primarily used for weed control in corn, barley, oat, rice, sorghum, sugarcane, and wheat production fields in the United States. The objectives of this review were to summarize (1) the history of HPPD-inhibitor and their use in the United States, (2) HPPD-inhibitor resistant weeds, their mechanism of resistance, and management, (3) interaction of HPPD-inhibitor with other herbicides, and (4) the future of HPPD-inhibitor-resistant crops. As of 2022, three broadleaf weeds (Palmer amaranth, waterhemp, and wild radish) have evolved resistance to the HPPD-inhibitor. The predominance of metabolic resistance to HPPD-inhibitor was found in aforementioned three …

Limited Irrigation For Managing Declining Water Resources In The Us High Plains, Bijesh Maharjan, Gary Hergert, Saurav Das

Department of Agronomy and Horticulture: Faculty Publications

The US High Plains region has a semiarid climate receiving between 330 and 455 mm of rainfall annually. In the Nebraska Panhandle of the High Plains, 30-year average rainfall is 394 mm, and one-fourth of agriculture is under irrigation. In addition to concerns about water quality, there is a growing concern over water quantity for ground- and surface-water resources that producers use for irrigation. Wisely managing limited water resources for irrigation can help maintain crop productivity and profitability. Deficit irrigation research for 13 years (2005–2017) was conducted in the Nebraska Panhandle to study effects of limited irrigation on maize ( …

Charles A. Francis, Abstracts And Publications [1969--2022], December 2022, Charles A. Francis

Department of Agronomy and Horticulture: Faculty Publications

Contents

I. Journal articles (218), p.1

II. Book reviews (60), p. 18

III. Published abstracts (213), p. 23

IV. Books (23), p. 40

V. Chapters in books (81), p. 42

VI. Symposium or workshop proceedings (127), p. 50

VII. Symposia or extension publications edited (31), p. 62

VIII. Miscellaneous (522), p. 65

Modeling The Evolution Of Herbicide Resistance In Weed Species With A Complex Life Cycle, K. Harrison Holmes, John L. Lindquist, Richard Rebarber, Rodrigo Werle, Melinda K. Yerka, Brigitte Tenhumberg

Brigitte Tenhumberg Papers

A growing number of weed species have evolved resistance to herbicides in recent years, which causes an immense financial burden to farmers. An increasingly popular method of weed control is the adoption of crops that are resistant to specific herbicides, which allows farmers to apply the herbicide during the growing season without harming the crop. If such crops are planted in the presence of closely related weed species, it is possible that resistance genes could transfer from the crop species to feral populations of the wild species via gene flow and become stably introgressed under ongoing selective pressure by the …

An Evaluation Of Eragrostis Tef For Future Cultivar Development, Eric Wayne Luteyn

Theses and Dissertations--Plant and Soil Sciences

The many benefits of utilizing teff (Eragrostis tef) as small grain is well documented in journal publications. Over time the domestication of this species has become essential to the diets of the local population and the livestock living in the African highlands. Current research points to a high diversity of trait characteristics found in many teff populations and the potential utilization of these traits to increase desirable characteristics in both grain and forage varieties. With the overarching goal of adding to what is already known about teff, this study evaluates the different traits that are of interest to …

Effect Of Essential Oils In The Control Of Fungal Diseases In Small Grains, Esneider Mahecha Bojaca

Electronic Theses and Dissertations

Spring wheat (Triticum aestivum L.) and oats (Avena sativa L.) are important crops due to their high consumption in our daily diet worldwide. They are the main food of consumption per capita due to the high amino-acid content as well of vitamins. However, grain production is limited due to the negative impact of the diseases that cause significant yield loss. Diseases in oats, such as crown rust caused by Puccinia coronata f. sp. avenae (Pca), and in wheat such as Fusarium head blight (FHB) caused by the fungus Fusarium graminearum. Foliar diseases such as tan spot incited by the fungi …

Getting To The Root Cause: The Genetic Underpinnings Of Root System Architecture And Rhizodeposition In Sorghum, Farren Smith

Graduate Theses, Dissertations, and Problem Reports (ETD)

Plants are some of the most diverse organisms on earth, consisting of more than 350,000 different species. To understand the underlying processes that contributed to plant diversification, it is fundamental to identify the genetic and genomic components that facilitated various adaptations over evolutionary history. Most studies to date have focused on the underlying controls of above-ground traits such as grain and vegetation; however, little is known about the “hidden half” of plants. Root systems comprise half of the total plant structure and provide vital functions such as anchorage, resource acquisition, and storage of energy reserves. The execution of these key …

Phomopsis Stem Canker Of Sunflower (Helianthus Annuus L.): Etiology And Epidemiological Conditions Affecting Endophytic Population Of Diaporthe Spp., And Fungicide Efficacy, Nabin Kumar Dangal

Electronic Theses and Dissertations

Phomopsis stem canker (PSC), caused by species of Diaporthe, is a major disease of sunflower (Helianthus annuus L.) in the U.S., which can cause yield loss over 40%. The disease prevalence increased since 2010 in the major sunflower producing U.S. states of Nebraska, Minnesota, North Dakota, and South Dakota. Previous studies on the use of foliar fungicides in managing Phomopsis stem canker indicated mixed results on their efficacy in disease reduction and yield gain. Additionally, we do not have sufficient information on asymptomatic colonization by endophytic Diaporthe on sunflower tissue and how foliar fungicide and weather parameters affect the prevalence …

Study Of Root System Architectural Traits Of Oat And Response To Endophyte Inoculation And Drought Stress, Krishna Ghimire

Electronic Theses and Dissertations

Oat is an important cereal crop grown worldwide. Oats have the potential to contribute to human health due to their unique nutritional attributes. Developing oat cultivars with efficient root systems able to extract heterogeneously distributed soil resources can help maintain yield under drought conditions and in nutrient poor soil. Various root traits determine the soil volume that is explored by the root system for resource acquisition. Knowledge about the genetic control of oat root traits and response to biotic and abiotic environmental factors is lacking. Identifying quantitative trait loci associated with root traits and understanding the response of roots to …

Keeping What You Sow: Intellectual Property Rights For Plant Breeders And Seed Growers, Paulina B. Jenney

Graduate Student Theses, Dissertations, & Professional Papers

Over the last 150 years, the food system in the present-day United States has undergone a transformational restructuring, from a diversified, decentralized, network of farmers and seed growers, to one in which the majority of crop production is controlled by a few industrial corporations. The consolidation of power has been under-girded by the application of intellectual property rights (IPR)—especially utility patents—to plant varieties and genetic traits, which are leveraged to exclude small-scale seed growers from accessing quality germplasm. Patents and restrictive licensing agreements recapitulate colonial structures by appropriating common and traditionally community-held resources for profit, and by creating reliance on …

Minimum Dataset And Metadata Guidelines For Soil-Test Correlation And Calibration Research, Nathan A. Slaton, Sarah E. Lyons, Deanna L. Osmond, Sylvie M. Brouder, Steve W. Culman, Gerson L. Drescher, Luciano C. Gatiboni, John Hoben, Peter J.A. Kleinman, Joshua M. Mcgrath, Robert O. Miller, Austin Pearce, Amy L. Shober, John T. Spargo, Jeff J. Volenec

Crop, Soil and Environmental Sciences Faculty Publications and Presentations

Soil-test correlation and calibration data are essential to modern agriculture, and their continued relevance is underscored by the expansion of precision farming and the persistence of sustainable soil management priorities. In support of transparent, science-based fertilizer recommendations, we seek to establish a core set of required and recommended information for soil-test P and K correlation and calibration studies, a minimum dataset, building on previous research. The Fertilizer Recommendation Support Tool (FRST) project team and collaborators are developing a national database that will support a soil-test-based nutrient management decision aid tool. The FRST team includes over 80 scientists from 37 land-grant …

Domestication Reshaped The Genetic Basis Of Inbreeding Depression In A Maize Landrace Compared To Its Wild Relative, Teosinte, Luis Fernando Samayoa, Bode A. Olukolu, Chin Jian Yang, Qiuyue Chen, Markus G. Stetter, Alessandra M. York, Jose De Jesus Sanchez-Gonzalez, Jeffrey C. Glaubitz, Peter J. Bradbury, Maria Cinta Romay, Qi Sun, Jinliang Yang, Jeffrey Ross-Ibarra, Edward S. Buckler, John F. Doebley, James B. Holland

Department of Agronomy and Horticulture: Faculty Publications

Inbreeding depression is the reduction in fitness and vigor resulting from mating of close relatives observed in many plant and animal species. The extent to which the genetic load of mutations contributing to inbreeding depression is due to large-effect mutations versus variants with very small individual effects is unknown and may be affected by population history. We compared the effects of outcrossing and self-fertilization on 18 traits in a landrace population of maize, which underwent a population bottleneck during domestication, and a neighboring population of its wild relative teosinte. Inbreeding depression was greater in maize than teosinte for 15 of …

Identification Of Candidate Genes And Genomic Regions Associated With Adult Plant Resistance To Stripe Rust In Spring Wheat, Amira M. I. Mourad, Mohamed A. Abou-Zeid, Shamseldeen Eltaher, P. Stephen Baenziger, Andreas Börner

Department of Agronomy and Horticulture: Faculty Publications

Wheat stripe rust (caused by Puccinia striiformis f. sp. tritici) is a major disease that damages wheat plants and affects wheat yield all over the world. In recent years, stripe rust became a major problem that affects wheat yield in Egypt. New races appeared and caused breakdowns in the resistant genotypes. To improve resistance in the Egyptian genotypes, new sources of resistance are urgently needed. In the recent research, a set of 95 wheat genotypes collected from 19 countries, including Egypt, were evaluated for their resistance against the Egyptian race(s) of stripe rust under field conditions in the two …

Evaluation Of Residual Herbicides Across Multiple Rice Production Systems, Lucas Connor Webster

LSU Doctoral Dissertations

A field study was conducted in 2019, 2020, and 2021 at the LSU Agricultural Center H. Rouse Caffey Rice Research Station (RRS) near Crowley, LA. to evaluate the crop safety and potential weed control of very long chain fatty acid (VLCFA) inhibiting herbicides in Louisiana rice production. The study evaluated the use of acetochlor, dimethenamid, s-metolachlor, and pyroxasulfone applied preemergence (PRE), delayed PRE (DPRE), and the two- to three- leaf, early postemergence (EPOST) rice growth stage. In general, rice injury decreased as application timing was delayed with the least amount of rice injury occurring when the VLCFA inhibiting herbicides were …

Relationships Among College-Level Science Course Enrollment, Environmental Perception, And Pro-Environmental Attitude: Evidence From The Us General Social Survey, Mazbahul G. Ahamad, Fahian Tanin

Department of Agronomy and Horticulture: Faculty Publications

Understanding pro-environmental attitudes is critical to encouraging pollution-minimizing behaviors. Therefore, identifying associated factors is essential for understanding different types of pro-environmental attitudes. We aimed to investigate the associations among individuals’ college-level science course enrollment and their perceptions of the level of spending to improve and protect the environment, as well as their pro-environmental attitudes. We used nationwide population-based cross-sectional survey data from 2,348 individuals obtained from the General Social Survey in the United States. An ordered logistic model was used to examine the associations among college-level science course enrollment, environmental perception, and pro-environmental attitude. We found that science course enrollment …

Cold Conditioned: Discovery Of Novel Alleles For Low-Temperature Tolerance In The Vavilov Barley Collection, Ahmad H. Sallam, Kevin P. Smith, Gongshe Hu, Jamie Sherman, Peter Stephen Baeziger, Jochum Wiersma, Carl Duley, Eric J. Stockinger, Mark E. Sorrells, Tamas Szinyei, Igor G. Loskutov, Olga N. Kovaleva, Jed Eberly, Brian J. Steffenson

Department of Agronomy and Horticulture: Faculty Publications

Climate changes leading to higher summer temperatures can adversely affect cool season crops like spring barley. In the Upper Midwest region of the United States, one option for escaping this stress factor is to plant winter or facultative type cultivars in the autumn and then harvest in early summer before the onset of high-temperature stress. However, the major challenge in breeding such cultivars is incorporating sufficient winter hardiness to survive the extremely low temperatures that commonly occur in this production region. To broaden the genetic base for winter hardiness in the University of Minnesota breeding program, 2,214 accessions from the …

Sustainable Intensification For A Larger Global Rice Bowl, Shen Yuan, Bruce A. Linquist, Lloyd T. Wilson, Kenneth G. Cassman, Alexander M. Stuart, Valerien Pede, Berta Miro, Kazuki Saito, Nurwulan Agustiani, Vina Eka Aristya, Leonardus Y. Krisnadi, Alencar Junior Zanon, Alexandre Bryan Heinemann, Gonzalo Carracelas, Nataraja Subash, Pathula S. Brahmanand, Tao Li, Shaobing Peng, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Future rice systems must produce more grain while minimizing the negative environmental impacts. A key question is how to orient agricultural research & development (R&D) programs at national to global scales to maximize the return on investment. Here we assess yield gap and resource-use efficiency (including water, pesticides, nitrogen, labor, energy, and associated global warming potential) across 32 rice cropping systems covering half of global rice harvested area. We show that achieving high yields and high resource-use efficiencies are not conflicting goals. Most cropping systems have room for increasing yield, resource-use efficiency, or both. In aggregate, current total rice production …

Hyperseed: An End-To-End Method To Process Hyperspectral Images Of Seeds, Tian Gao, Anil Kumar Nalini Chandran, Puneet Paul, Harkamal Walia, Hongfeng Yu

School of Computing: Faculty Publications

High-throughput, nondestructive, and precise measurement of seeds is critical for the evaluation of seed quality and the improvement of agricultural productions. To this end, we have developed a novel end-to-end platform named HyperSeed to provide hyperspectral information for seeds. As a test case, the hyperspectral images of rice seeds are obtained from a high-performance line-scan image spectrograph covering the spectral range from 600 to 1700 nm. The acquired images are processed via a graphical user interface (GUI)-based open-source software for background removal and seed segmentation. The output is generated in the form of a hyperspectral cube and curve for each …

Climate And Agronomy, Not Genetics, Underpin Recent Maize Yield Gains In Favorable Environments, Gonzalo Rizzo, Juan Pablo Monzon, Fatima Amor Tenorio, Réka Howard, Kenneth G. Cassman, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Quantitative understanding of factors driving yield increases of major food crops is essential for effective prioritization of research and development. Yet previous estimates had limitations in distinguishing among contributing factors such as changing climate and new agronomic and genetic technologies. Here, we distinguished the separate contribution of these factors to yield advance using an extensive database collected from the largest irrigated maize-production domain in the world located in Nebraska (United States) during the 2005-to-2018 period. We found that 48% of the yield gain was associated with a decadal climate trend, 39% with agronomic improvements, and, by difference, only 13% with …

South Dakota Farmers’ Perceived Extreme Weather Frequency And Adaptation Measures, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted surveys of eastern South Dakota (SD) commodity crop producers with the support of the South Dakota Corn Utilization Council. Using publicly available addresses of government program participants, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible and 708 responded to the survey for a response rate of 30%. In 2021, the same producers who took the survey in 2018 were asked to take a follow up survey. 94 were ineligible, and 350 responded for a 59% response rate. Producers could take the survey online or via …

South Dakota Farmer Survey Chemical Use On Cropland, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted surveys with South Dakota (SD) commodity crop producers in the eastern part of the state in both 2018 and 2021. Producers could take the survey online or via mail and were asked questions about their farm, farming practices including usage of soil and water conservation practices, challenges, and benefits to using conservation practices, and their attitudes about the environment. Using publicly available addresses from the Farm Service Agency of government program participants, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible, and 708 responded to the …

South Dakota Farmers’ Usage Of Integrated Crop & Livestock Management, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted producer surveys in the eastern part of South Dakota in both 2018 and 2021. Producers could take the survey online or via mail and were asked questions about their farm, farming practices including usage of soil and water conservation practices, and their values. Using publicly available addresses from the Farm Service Agency, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible, and 708 responded to the survey for a response rate of 30%. In 2021, the same producers who took the survey in 2018 were asked …