Agronomy and Crop Sciences Commons^™

Miscanthus 3 Giganteus Productivity: The Effects Of Management In Different Environments, Matt Maughan, German Bollero, D.K. Lee, Robert Darmody, Stacy Bonos, Laura Cortese, James Murphy, Roch E. Gaussoin, Matthew Sousek, David Williams, Linda Williams, Fernando Miguez, Thomas Voigt

Department of Agronomy and Horticulture: Faculty Publications

Miscanthus 9 giganteus is a C4 perennial grass that shows great potential as a high-yielding biomass crop. Scant research has been published that reports M. 9 giganteus growth and biomass yields in different environments in the United States. This study investigated the establishment success, plant growth, and dry biomass yield of M. 9 giganteus during its first three seasons at four locations (Urbana, IL; Lexington, KY; Mead, NE; Adelphia, NJ) in the United States. Three nitrogen rates (0, 60, and 120 kg ha -1) were applied at each location each year. Good survival of M. 9 giganteus during its first …

Substantial Equivalence Assessment Of Transgenic Corn Plants, Martina Garda

Student Theses and Dissertations

Transgenic crops are regulated until they are judged to be as safe as non-transgenic plants. To grow them without permits, they must attain regulatory approval. . A lot of data are needed to show "substantial equivalence" and safety . This work deals with corn lines that contain cellulase genes. We hypothesize that no difference exists between Genetically Engineered (GE) and non-Genetically Engineered (non-GE) corn seeds at the morphological, protein, and DNA levels, except for the protein expressed specifically from the corresponding gene. This research will address concerns in commercializing GE crops, such as those containing a gene for either an …

Gata-Family Transcription Factors In Magnaporthe Oryzae, Cristian F. Quispe

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The filamentous fungus, Magnaporthe oryzae, responsible for blast rice disease, destroys around 10-30% of the rice crop annually. Infection begins when the specialized infection structure, the appressorium, generates enormous internal turgor pressure through the accumulation of glycerol. This turgor acts on a penetration peg emerging at the base of the cell, causing it to breach the leaf surface allowing its infection.

The enzyme trehalose-6- phosphate synthase (Tps1) is a central regulator of the transition from appressorium development to infectious hyphal growth. In the first chapter we show that initiation of rice blast disease requires a regulatory mechanism involving an …

Transpiration-Use Efficiency Coefficient Of Seven Weed Species As Affected By Fraction Of Transpirable Soil Water And Growth Stage, Venkatarao Mannam

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Transpiration-use efficiency coefficient (Kc) describes the amount of biomass produced per unit transpiration at a given vapor pressure deficit. A series of greenhouse experiments were conducted to determine the K_c values of seven weed species and to measure how K_c values were affected by fraction of transpirable soil water (FTSW) level and plant growth stage. Experiments were conducted using a factorial design with 4 levels of water stress (0.3, 0.4, 0.7, and 1.0 FTSW) and two harvest times (first bloom and seed maturity). After plants attained a predetermined size, each plant was sealed at the base using a …

Herbicide-Resistant Risk Assessment: Response Of Common Nebraska Weeds To Dicamba Dose, Roberto J. Crespo

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Dicamba-resistant soybeans are being developed to provide an additional herbicide mechanism of action that can be used in soybean, and to provide a tool to help manage or mitigate the evolution of other herbicide-resistant weed populations. The objectives of this thesis were to assess the risk of common Nebraska weeds developing resistance to dicamba, quantify baseline dose-response to dicamba of high-risk weed species, and survey the variability in dicamba dose-response among populations of those species. Twenty-five weed scientists were asked to estimate the risk likelihood of ten weed species evolving resistance to dicamba following the commercialization of dicamba-resistant soybean. Palmer …

Sweet Sorghum As An Alternative Cellulosic Biofuel In Eastern Kentucky, Sarah A. Hazenfield

Morehead State Theses and Dissertations

A thesis presented to the faculty of the College of Science and Technology at Morehead State University in partial fulfillment of the requirements for the Degree of Master of Science by Sarah A. Hazenfield in June of 2011.

Factors Controlling Pre-Columbian And Early Historic Maize Productivity In The American Southwest, Part 2: The Chaco Halo, Mesa Verde, Pajarito Plateau/ Bandelier, And Zuni Archaeological Regions, Larry Benson

United States Geological Survey: Staff Publications

Chemical and nutrient analyses of 471 soil samples from 161 sites within four archaeological regions (Pajarito Plateau/Bandelier, Zuni, Mesa Verde, and the Chaco Halo) were combined with historical climate data in order to evaluate the agricultural productivity of each region. In addition, maize productivity and field-life calculations were performed using organic-nitrogen (N) values from the upper 50 cm of soil in each region and a range (1–3%/year) of N-mineralization rates. The endmember values of this range were assumed representative of dry and wet climate states. With respect to precipitation and heat, the Pajarito Plateau area has excellent agricultural potential; the …

Economic Impacts Of Drought On Kentucky Corn, Hay, And Soybeans, Kortney E. Craft

Masters Theses & Specialist Projects

Understanding climatic impacts is important if we are to comprehend the relationship between climate and society. Weather phenomena can have environmental, economical, and social impacts. Drought is the natural hazard that affects people the most. It is also the most complex and least understood. There is no one universally accepted definition for drought which makes its examination difficult. Droughts’ duration is also difficult to determine because it has no clearly defined onset and end. Also, drought varies both geographically and temporally making uniform drought monitoring difficult. Since drought is difficult to monitor and access, drought impacts are often poorly documented. …

Screening Synteny Blocks In Pairwise Genome Comparisons Through Integer Programming, Haibao Tang, Eric Lyons, Brent S. Pedersen, James C. Schnable, Andrew H. Paterson, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

Background:

It is difficult to accurately interpret chromosomal correspondences such as true orthology and paralogy due to significant divergence of genomes from a common ancestor. Analyses are particularly problematic among lineages that have repeatedly experienced whole genome duplication (WGD) events. To compare multiple “subgenomes” derived from genome duplications, we need to relax the traditional requirements of “one-to-one” syntenic matchings of genomic regions in order to reflect “one-to-many” or more generally “many-to-many” matchings. However this relaxation may result in the identification of synteny blocks that are derived from ancient shared WGDs that are not of interest. For many downstream analyses, we …

Saŋɔ Baara Cogo N´A Feere Cogo Gafe: Mogo Minuwye Gafe Dilan Oye = Fiche De Production Et De Commercialisation Du Mil = Production And Marketing Of Millet, Botorou Ouendeba, Niaba Teme

USAID Mali Mission Awards

U.S. government publication about millet production and sales in West Africa. In the Bambara language.

Fiche De Production Et De Commercialisation Du Mil = Production And Marketing Of Millet, Botorou Ouendeba, Niaba Teme

USAID Mali Mission Awards

Publication about production and sales of millet in West Africa. In French.

A First Insight Into Population Structure And Linkage Disequilibrium In The U.S. Peanut Minicore Collection, Vikas Belamkar, Michael Gomez Selvaraj, Jamie L. Ayers, Paxton R. Payton, Naveen Puppala, Mark D. Burow

Department of Agronomy and Horticulture: Faculty Publications

Knowledge of genetic diversity, population structure, and degree of linkage disequilibrium (LD) in target association mapping populations is of great importance and is a prerequisite for LD-based mapping. In the present study, 96 genotypes comprising 92 accessions of the US peanut minicore collection, a component line of the tetraploid variety Florunner, diploid progenitors A. duranensis (AA) and A. ipaënsis (BB), and synthetic amphidiploid accession TxAG-6 were investigated with 392 simple sequence repeat (SSR) marker bands amplified using 32 highly-polymorphic SSR primer pairs. Both distance- and model-based (Bayesian) cluster analysis revealed the presence of structured diversity. In general, the wild-species accessions …

Genes Identified By Visible Mutant Phenotypes Show Increased Bias Toward One Of Two Subgenomes Of Maize, James C. Schnable, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

Not all genes are created equal. Despite being supported by sequence conservation and expression data, knockout homozygotes of many genes show no visible effects, at least under laboratory conditions. We have identified a set of maize (Zea mays L.) genes which have been the subject of a disproportionate share of publications recorded at MaizeGDB. We manually anchored these ‘‘classical’’ maize genes to gene models in the B73 reference genome, and identified syntenic orthologs in other grass genomes. In addition to proofing the most recent version 2 maize gene models, we show that a subset of these genes, those that …

Dose–Sensitivity, Conserved Non-Coding Sequences, And Duplicate Gene Retention Through Multiple Tetraploidies In The Grasses, James C. Schnable, Brent S. Pedersen, Sabarinath Subramaniam, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

Whole genome duplications, or tetraploidies, are an important source of increased gene content. Following whole genome duplication, duplicate copies of many genes are lost from the genome. This loss of genes is biased both in the classes of genes deleted and the subgenome from which they are lost. Many or all classes are genes preferentially retained as duplicate copies are engaged in dose sensitive protein–protein interactions, such that deletion of any one duplicate upsets the status quo of subunit concentrations, and presumably lowers fitness as a result. Transcription factors are also preferentially retained following every whole genome duplications studied. This …

Ŋɔsibɔ N´A Feere Cɔgɔ = Fiche De Production Et De Commercialisation Du Sorgho, Mali = Production And Marketing Of Sorghum, Mali, Botorou Ouendeba

USAID Mali Mission Awards

U.S. government publication about production and sales of sorghum in West Africa.

Wheat Yield Potential And Land Management Constraints In The South West Of Western Australia, Dennis Van Gool

Resource management technical reports

This report provides the underpinning information to help improve the long term profitability of wheat cropping. It documents the realistic potential yield of the 18 million hectares of agricultural land in the South West of Western Australia and the gap between this potential and the actual yields, based on shire averages. This report also summarises major land management constraints that limit the yield potential. This information can be used to aid strategic planning at different levels, for example state, shire and, with care, as a starting point for farm planning.

Fiche De Production Et De Commercialisation Du Sorgho, Mali = Production And Marketing Of Sorghum, Mali, Botorou Ouendeba

USAID Mali Mission Awards

U.S. government publication about production and sales of sorghum in West Africa. In French.

Sorghum Clear Beer Value Chain, Bernadette C. Chimai

INTSORMIL Presentations

The markets and industrial utilization of agricultural commodities have undergone considerable change in the last few decades.

In Zambia, sorghum was considered a traditional crop with limited industrial uses.

Research and transformations in consumer tastes and preferences have led to the development of new uses for sorghum.

Potential markets for industrial utilization of sorghum have been identified as food processing, beer brewing, feed concentrates and energy production.

One of the success stories in industrial utilization of sorghum has been Eagle, a sorghum based clear beer produced by Zambian breweries.

The study reported in this paper aims to examine the main …

Managing Complexity In Modern Farming, Ross Kingwell

Natural Resources Research Articles

Modern farming in Australia is no longer simple. Farms are large, multi-enterprise businesses underpinned by expensive capital investments, changing production technologies, volatile markets and social challenges. The complexity of modern broadacre farming leads to the question: what is the nature of the relationship between farm business complexity and farm profitability? This study uses bioeconomic farm modelling and employs eight measures of complexity to examine the profitability and complexity of a wide range of broadacre farming systems in Australia. Rank order correlations between farm profitability and each measure of complexity show inconsistent relationships, although the most profitable farming systems are found …

Modeling Gross Primary Production Of Irrigated And Rain-Fed Maize Using Modis Imagery And Co2 Flux Tower Data, Joshua L. Kalfas, Xiangming Xiao, Diana X. Vanegas, Shashi B. Verma, Andrew E. Suyker

School of Natural Resources: Faculty Publications

Abstract

Information on gross primary production (GPP) of maize croplands is needed for assessing and monitoring maize crop conditions and the carbon cycle. A number of studies have used the eddy covariance technique to measure net ecosystem exchange (NEE) of CO₂ between maize cropland fields and the atmosphere and partitioned NEE data to estimate seasonal dynamics and interannual variation of GPP in maize fields having various crop rotation systems and different water management practices. How to scale up in situ observations from flux tower sites to regional and global scales is a challenging task. In this study, the Vegetation …

Report Of Nine Sorghum Flour Workshops, Report For Intsormil; Subject: “Utilization Of Cti Grinders For Small Scale Sorghum Flour Production In Central America”, Intsormil

INTSORMIL Scientific Publications

In Nicaragua, Sorghum grain has been a crops using only for animal feed. Fortunately Scientifics have been researched about its nutritional sorghum grain properties and some of the country that they have been interested to bring the technology about sorghum flour has been Nicaragua because its growths in 3 big areas; in the north, south and west region. Now, that is knew their characteristics and others, so INTA and INTSORMIL are diffusing the technology about sorghum flour to increase the production of sorghum grain, reduce the cost production of bread and some ethnics drinks, to improve the food security and …

Estimating The Potential Returns To Research And Development From Sorghum Value Added Products In El Salvador And Nicaragua, Jaeljattin R. Jaen Celada

INTSORMIL Scientific Publications

Sorghum bicolor (L.) Moench is a drought tolerant crop able to adapt to hot and dry weather. It has excellent chemical and physical properties, which make it a grain of good quality for processing different types of products. This research is an impact assessment study that estimated the potential impacts of new uses of sorghum by using an equilibrium displacement model. The data used was drawn from interviews developed in July 2011.Using total quantity production, prices, prices elasticities and cost shares 8 potential market scenarios were simulated. Results between countries were similar. Thus, the analysis was applied for both countries. …

Switchgrass, Kenneth P. Vogel, Gautam Sarath, Aaron J. Saathoff, Robert B. Mitchell

Department of Agronomy and Horticulture: Faculty Publications

17.1 Introduction

Switchgrass (Panicum virgatum L.) is a warm-season perennial grass that is native to North America that is being developed into a biomass energy crop. It has been used in pastures and for conservation purposes in the Great Plains and the Midwest, USA, for over 70 years.1 The research supporting its use as a pasture and conservation species was largely conducted by US Department of Agriculture (USDA) research programs, most notably the Agricultural Research Service (ARS) project located at the University of Nebraska-Lincoln and USDA Plant Materials Centers that are located throughout the United States. In this report, …

Identification Of A Second Asian Soybean Rust Resistance Gene In Hyuuga Soybean, Mandy D. Kendrick, Donna K. Harris, Bo-Keun Ha, D. L. Hyten, P. B. Cregan, Reid D. Frederick, H. Roger Boerma, Kerry F. Pedley

Department of Agronomy and Horticulture: Faculty Publications

Asian soybean rust (ASR) is an economically significant disease caused by the fungus Phakopsora pachyrhizi. The soybean genes Rpp3 and Rpp?(Hyuuga) confer resistance to specific isolates of the pathogen. Both genes map to chromosome 6 (Gm06) (linkage group [LG] C2). We recently identified 12 additional soybean accessions that harbor ASR resistance mapping to Gm06, within 5 centimorgans of Rpp3 and Rpp?(Hyuuga). To further characterize genotypes with resistance on Gm06, we used a set of eight P. pachyrhizi isolates collected from geographically diverse areas to inoculate plants and evaluate them for differential phenotypic responses. …

Mutational Analysis Of The Major Soybean Uref Paralogue Involved In Urease Activation, Joe C. Polacco, D. L. Hyten, Mônica Medeiros-Silva, David A. Sleper, Kristin D. Bilyeu

Department of Agronomy and Horticulture: Faculty Publications

The soybean genome duplicated ~14 and 45 million years ago and has many paralogous genes, including those in urease activation (emplacement of Ni and CO₂ in the active site). Activation requires the UreD and UreF proteins, each encoded by two paralogues. UreG, a third essential activation protein, is encoded by the single-copy Eu3, and eu3 mutants lack activity of both urease isozymes. eu2 has the same urease-negative phenotype, consistent with Eu2 being a single-copy gene, possibly encoding a Ni carrier. Unexpectedly, two eu2 alleles co-segregated with missense mutations in the chromosome 2 UreF paralogue (Ch02UreF), suggesting …

Cytokinin-Mediated Source ⁄Sink Modifications Improve Drought Tolerance And Increase Grain Yield In Rice Under Water-Stress, Zvi Peleg, Maria Reguera, Ellen Tumimbang, Harkamal Walia, Eduardo Blumwald

Department of Agronomy and Horticulture: Faculty Publications

Drought is the major environmental factor limiting crop productivity worldwide. We hypothesized that it is possible to enhance drought tolerance by delaying stress-induced senescence through the stress-induced synthesis of cytokinins in crop-plants. We generated transgenic rice (Oryza sativa) plants expressing an isopentenyltransferase (IPT) gene driven by PSARK, a stress- and maturation-induced promoter. Plants were tested for drought tolerance at two yield-sensitive developmental stages: pre- and post-anthesis. Under both treatments, the transgenic rice plants exhibited delayed response to stress with significantly higher grain yield (GY) when compared to wild-type plants. Gene expression analysis revealed a significant shift in expression of hormone-associated …

Contents, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Instructions For Authors, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Letter From The Dean, Michael Vayda

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Discovery: The Student Journal Of Dale Bumpers College Of Agricultural, Food And Life Sciences - Volume 12 2011, Several Authors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.