Agronomy and Crop Sciences Commons^™

Early Growth Stages Salinity Stress Tolerance In Cm72 X Gairdner Doubled Haploid Barley Population, Tefera T. Angessa, Xiao-Qi Zhang, Gaofeng Zhou, Sue Broughton, Wenying Zhang, Chengdao Li

Grain and Other Field Crops Research Articles

A doubled haploid (DH) population of barley (Hordeum vulgare L.) generated from salinity tolerant genotype CM72 and salinity sensitive variety Gairdner was studied for salinity stress tolerance at germination, seedling emergence and first leaf full expansion growth stages. Germination study was conducted with deionized water, 150 mM and 300 mM NaCl treatments. Seedling stage salinity tolerance was conducted with three treatments: control, 150 mM NaCl added at seedling emergence and first leaf full expansion growth stages. Results from this study revealed transgressive phenotypic segregations for germination percentage and biomass at seedling stage. Twelve QTL were identified on chromosomes 2H–6H each …

Protocol For Enrichment Of The Membrane Proteome Of Mature Tomato Pollen, Puneet Paul, Palak Chaturvedi, Anida Mesihovic, Arindam Ghatak, Wolfram Weckwerth, Enrico Schleiff

Department of Agronomy and Horticulture: Faculty Publications

We established and elaborated on a method to enrich the membrane proteome of mature pollen from economically relevant crop using the example of Solanum lycopersicum (tomato). To isolate the pollen protein fraction enriched in membrane proteins, a high salt concentration (750 mM of sodium chloride) was used. The membrane protein-enriched fraction was then subjected to shotgun proteomics for identification of proteins, followed by in silico analysis to annotate and classify the detected proteins.

Transcriptomic Resources For The Medicinal Legume Mucuna Pruriens: De Novo Transcriptome Assembly, Annotation, Identification And Validation Of Est-Ssr Markers, N. Sathyanarayana, Ranjith Kumar Pittala, Pankaj Kumar Tripathi, Ratan Chopra, Heikham Russiachand Singh, Vikas Belamkar, Pardeep Kumar Bhardwaj, Jeff J. Doyle, Ashley N. Egan

Department of Agronomy and Horticulture: Faculty Publications

Background:

The medicinal legume Mucuna pruriens (L.) DC. has attracted attention worldwide as a source of the anti-Parkinson’s drug L-Dopa. It is also a popular green manure cover crop that offers many agronomic benefits including high protein content, nitrogen fixation and soil nutrients. The plant currently lacks genomic resources and there is limited knowledge on gene expression, metabolic pathways, and genetics of secondary metabolite production. Here, we present transcriptomic resources for M. pruriens, including a de novo transcriptome assembly and annotation, as well as differential transcript expression analyses between root, leaf, and pod tissues. We also develop microsatellite markers …

A Comprehensive Analysis Of Alternative Splicing In Paleopolyploid Maize, Wenbin Mei, Sanzhen Liu, James C. Schnable, Cheng-Ting Yeh, Nathan M. Springer, Patrick S. Schnable, William Brad Barbazuk

Department of Agronomy and Horticulture: Faculty Publications

Identifying and characterizing alternative splicing (AS) enables our understanding of the biological role of transcript isoform diversity. This study describes the use of publicly available RNA-Seq data to identify and characterize the global diversity of AS isoforms in maize using the inbred lines B73 and Mo17, and a related species, sorghum. Identification and characterization of AS within maize tissues revealed that genes expressed in seed exhibit the largest differential AS relative to other tissues examined. Additionally, differences in AS between the two genotypes B73 and Mo17 are greatest within genes expressed in seed. We demonstrate that changes in the level …

Using Ancient Practices To Fix Modern Problems: The Effect Of Biochar On Einkorn Wheat And Soil Quality, Sarah L. Miller

Senior Honors Projects, 2010-2019

As farmland soils become more and more depleted, the importance of effective soil amendments grows. Biochar is a potential soil and carbon amendment that could improve water and nutrient holding capacity and foster growth of beneficial microbes and fungi. Biochar does not contain nutrients but acts like a sponge, absorbing nutrients around it. It is so effective at holding nutrients that in the first year, if applied alone, it can make the nutrients unavailable to plants and lowers crop yields. To get the best results biochar must be saturated, also referred to as inoculated or charged, with nutrients. Once the …

Efficiency And Competitiveness Of Kosovo Raspberry Producers, Rina Vuciterna

Graduate Theses and Dissertations

Raspberry production is a growing industry in Kosovo. In addition to private investments, this growth has been supported by grants, subsidies, and direct investment from international donor organizations and governmental institutions. At present, most of the commercially produced raspberries in Kosovo are produced on small farms, harvested by farmers and packed manually by collection centers, and then sold in frozen form for the export market. The long-term viability and continued growth of raspberry production in Kosovo depends on the industry being able to compete in export markets and hold its own against production regions in Poland, Serbia, and Russia. Our …

Nutrient Loading Reduction In A Tile Drained Agricultural Watershed Through Watershed-Scale Cover Cropping: A High Resolution Analysis, Benjamin Gerald Bruening

Theses and Dissertations

Nutrient pollution originating from agricultural regions in the Midwest is a serious issue, leading to pollution of drinking water sources as well as large hypoxic zones in the Gulf of Mexico. The source of much of this contamination has been shown to be runoff from agricultural fields in the Upper Mississippi River Basin. One method that has been shown to reduce this pollution from the Upper Mississippi River Basin is the planting of winter cover crops. Winter cover crops such as rye and tillage radish have been shown to significantly reduce nitrate exported from agricultural fields, even in tile-drained watersheds …

Determining The Effects Of Sulfur Fertility Levels On Edamame Soybean [ Glycine Max ( L. ) Merrill ] Protein Components, Theoneste Nzaranyimana

Theses and Dissertations

Edamame [Glycine max (L.) Merr.] a vegetable type soybean is harvested and consumed before reaching its maturity stage (R6). Its health properties drew attention to U.S. consumers because of its high protein content. Proteins are the major structural component of all cells in the living organisms. They are made of essential and non-essential amino acids which play a big role in growth and development and are source of energy. Proteins act as enzymes, antibodies, and hormones and blood protein. Sulfur (S) is a component of the amino acids cysteine (Cys) and methionine (Met) which are the building blocks for proteins. …

Emergence, Competition, And Management Of Glyphosate-Resistant Common Ragweed (Ambrosia Artemisiifolia L.) In Nebraska Soybean, Ethann R. Barnes

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Common ragweed (Ambrosia artemisiifolia L.) is a competitive annual broadleaf weed in soybean (Glycine max) production fields throughout North America. The recent confirmation of glyphosate-resistant common ragweed in Nebraska justified the need to assess the emergence pattern and competitive ability of common ragweed in soybean and to evaluate alternative herbicide programs for effective management. The objectives of this research were to: 1) evaluate the effect of tillage and develop a predictive model for the emergence pattern of common ragweed in Nebraska; 2) model the competitive interaction between soybean and common ragweed as influenced by density and irrigation …

A Web Based Real Time Nitrogen Leaching Calculator, Saeideh Samani, Babak Samani, Haishun Yang

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

While nitrogen (N) is an essential nutrient for corn, its leaching to ground water is an serious environmental issue and a hazard to public health. N leaching is closely linked to weather factors, especially rainfall. Prediction of N leaching in cropping systems is critical to improvement of crop management and reduction of N leaching. The objective of this project is to develop a web app that predicts in real-time mode N leaching across Nebraska using real-time weather data.

We are in the processing of developing the web app and expect a prototype to be running in 2017 cropping season. Field …

Genomic Regions Involved In Seed Protein, Oil, And Carbohydrate Concentration In Soybean, Samantha J. Mcconaughy

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Soybeans [Glycine max (L.) Merr.] are processed for their high-quality vegetable oil and protein meal for feed, food, and industrial applications but, because of the high negative correlations between seed protein and oil concentration, it has been difficult to develop soybean lines with concomitant increases in both protein and oil. Previous studies considered only seed protein or oil concentration. This study is unique in that populations were developed using parental lines that differed in their protein, oil, and total carbohydrate concentrations in the mature seed. Two soybean populations were developed using soybean accession PI 547827 with lower total sugars as …

The Lx Report Of The Bean Improvement Cooperative No. 60, March 2017.

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

CONTENTS

LX Annual Report of the Bean Improvement Cooperative xi

BIC Coordinating Committee Membership - 1957 to 2017 . xii

BIC Meritorious Service and Distinguished Achievement Award Recipients - 1957 to 2015 xiii

BIC Awards Nomination Request for 2017 xvi

BIC/NAPIA Meeting in 2017 . xix

In Memory of Guillermo E. Galvez-Enriquez xx

RESEARCH PAPERS FOR 2017

OPTIMIZING SPORULATION OF Pseudocercospora griseola IN VITRO • Paula F. de Pádua1, Rafael Pereira1, Luanna B. W. Gomes1 and Elaine A. de Souza1* 1

FINE MAPPING THE BROAD SPECTRUM ANTHRACNOSE RESISTANCE GENE IN AMENDOIM CAVALO 3 • Gilio, T.A.S.1, Oscar P. Hurtado-Gonzales2, Giseli …

Towards The Development Of A Sustainable Soya Bean-Based Feedstock For Aquaculture, Hyunwoo Park, Steven Weier, Fareha Razvi, Pamela A. Peña, Neil A. Sims, Jennica Lowell, Cory Hungate, Karma Kissinger, Gavin Key, Paul Fraser, Jonathan Napier, Edgar B. Cahoon, Thomas Clemente

Center for Plant Science Innovation: Faculty Publications

Soya bean (Glycine max (L.) Merr.) is sought after for both its oil and protein components. Genetic approaches to add value to either component are ongoing efforts in soya bean breeding and molecular biology programmes. The former is the primary vegetable oil consumed in the world. Hence, its primary usage is in direct human consumption. As a means to increase its utility in feed applications, thereby expanding the market of soya bean coproducts, we investigated the simultaneous displacement of marine ingredients in aquafeeds with soya bean-based protein and a high Omega-3 fatty acid soya bean oil, enriched with alpha-linolenic …

Corn Residue Use By Livestock In The United States, Marty R. Schmer, Rachael M. Brown, Virginia L. Jin, Robert B. Mitchell, Daren D. Redfearn

Department of Agronomy and Horticulture: Faculty Publications

Corn (Zea mays L.) residue grazing or harvest provides a simple and economical practice to integrate crops and livestock, but limited information is available on how widespread corn residue utilization is practiced by US producers. In 2010, the USDA Economic Research Service surveyed producers from 19 states on corn grain and residue management practices. Total corn residue grazed or harvested was 4.87 million ha. Approximately 4.06 million ha was grazed by 11.7 million livestock (primarily cattle) in 2010. The majority of grazed corn residue occurred in Nebraska (1.91 million ha), Iowa (385,000 ha), South Dakota (361,000 ha), and Kansas …

Corn Silage Variety Trial Archive, Jonathan Kleinjan, David Casper, Kevin K. Kirby, S. M. Hawks

SDSU Extension Publications Archive

This report features the available corn silage data from 2003-2017. Crop performance testing results are released annually through the activities of SDSU Extension and the South Dakota Agricultural Experiment Station at SDSU.

A Comprehensive Image-Based Phenomic Analysis Reveals The Complex Genetic Architecture Of Shoot Growth Dynamics In Rice (Oryza Sativa), Malachy T. Campbell, Qian Du, Kan Liu, Chris J. Brien, Bettina Berger, Chi Zhang, Harkamal Walia

Agronomy & Horticulture -- Faculty Publications

Early vigor is an important trait for many rice (Oryza sativa L.)- growing environments. However, genetic characterization and improvement for early vigor is hindered by the temporal nature of the trait and strong genotype × environment effects. We explored the genetic architecture of shoot growth dynamics during the early and active tillering stages by applying a functional modeling and genomewide association (GWAS) mapping approach on a diversity panel of ~360 rice accessions. Multiple loci with small effects on shoot growth trajectory were identified, indicating a complex polygenic architecture. Natural variation for shoot growth dynamics was assessed in a subset …

Evaluating Adaptions Of Soft Red Winter Wheat In Eastern Region Of Usa, Dilmini Alahakoon, Anne Fennell, Jixiang Wu

Agronomy, Horticulture and Plant Science Faculty Publications

Identification of winter wheat genotypes that are highly adapted to a wide range of environmental conditions is one of the most important wheat research objectives. Multienvironment trials (METs) under diverse environments is a commonly used practice to evaluate mean performance and yield stability. However, locations used and genotypes planted may vary from year to year which may cause yield stability analysis to be statistically challenging. In this study, we evaluated yield trial data containing 117 eastern soft red winter wheat genotypes that were grown in 35 locations in eastern production areas and four growing seasons (2012/2013 to 2015/2016). We used …

Spring Wheat Variety Trial Archive, Robert Hall, Kevin Kirby, John Rickertsen, Bruce Swan, G. Piechowski, Jesse Hall, Nathan Mueller, Christopher Graham, S. M. Hawks, Jonathan Kleinjan

SDSU Extension Publications Archive

Crop performance testing results are released annually through the activities of SDSU Extension and the South Dakota Agricultural Experiment Station at SDSU.

Oats Variety Trial Archive, Robert Hall, Kevin K. Kirby, John Rickertsen, Bruce Swan, G. Piechowski, Jesse Hall, S. M. Hawks, Nathan Mueller, Christopher Graham, Jonathan Kleinjan, Shaukat Ali

SDSU Extension Publications Archive

This report features the available oats data from 2003-2017. Crop performance testing results are released annually through the activities of SDSU Extension and the South Dakota Agricultural Experiment Station at SDSU.

Grain Sorghum Variety Trial Archive, John Rickertsen, Bruce Swan, Nathan Mueller, Christopher Graham, Jonathan Kleinjan, Kevin Kirby, Dwayne Beck, Michael Swan

SDSU Extension Publications Archive

This report features the available sorghum data from 2003-2017. Crop performance testing results are released annually through the activities of SDSU Extension and the South Dakota Agricultural Experiment Station at SDSU.

Sunflower & Flax Hybrid Performance And Variety Trial Archive, Kathleen Grady, Lee Gilbertson, Thandiwe Nleya, John Rickertsen, Bruce Swan, Febina Mathew, Christopher Graham, Nathan Braun, Paul Okello

SDSU Extension Publications Archive

This report features the available sunflower and flax data from 2003-2017. Crop performance testing results are released annually through the activities of SDSU Extension and the South Dakota Agricultural Experiment Station at SDSU.

Alfalfa Variety Trial Results Archive, Vance Owens, R. Bortnem, D. Gustafson, E. Omdahl, Chris Lee, Peter Jeranyama, Matt Hansen, Karla Hernandez

SDSU Extension Publications Archive

Crop performance testing results are released annually through the activities of SDSU Extension and the South Dakota Agricultural Experiment Station at SDSU.

Soybean Variety Trial Archive, Kevin Kirby, Robert Hall, G. Piechowski, Jesse Hall, S. M. Hawks, Nathan Mueller, Jonathan Kleinjan

SDSU Extension Publications Archive

This report features the available soybean variety trial data from 2003-2017. Crop performance testing results are released annually through the activities of SDSU Extension and the South Dakota Agricultural Experiment Station at SDSU.

Corn Hybrid Trial Archive, Robert Hall, Kevin Kirby, G. Piechowski, Nathan Mueller, Jonathan Kleinjan, Jesse Hall, S. M. Hawks

SDSU Extension Publications Archive

This report features the available corn data from 2003-2017. Crop performance testing results are released annually through the activities of SDSU Extension and the South Dakota Agricultural Experiment Station at SDSU.

Small Landholders Battle The Leaf Folder: Improving Livelihoods In The Solomon Islands, Dalia Tayseer Najjar

Bard Center for Environmental Policy

Sweet Potato is an important staple food crop grown by subsistence farmers in the Solomon Islands. It plays an important food security role and a major source of nutrition and livelihood in the rural areas as well as urban areas in the country. However, the spread of agricultural pests, in particular, the green leaf folder pest (Psara hipponalis), has significantly increased in recent years leaving many smallholder farmers with reduced yields and food insecurity. In this thesis, I reviewed the literature on the common mechanisms used to evaluate the drivers of pest presence and identified the major factors …

Bumpers College Students In Action, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Instructions For Authors, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Letter From The Dean, Lona Robertson

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Message From The Faculty Editor, Mary Savin

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Contents, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.