Agricultural Science Commons^™

Re-Evaluation Of Late Season Action Thresholds And The Effect Of Seed Treatments On Early Season Colonization Of Threecornered Alfalfa Hopper, Spissistilus Festinus (Say), In Louisiana Soybean, Glycine Max (L) Merr, Tyler Ray Tagle Musgrove

LSU Master's Theses

Soybean, Glycine max (L.) Merr, is considered the most economically important oil and feed crop in the US and is grown on nearly 35,000,000 ha on an annual basis. Factors that limit yield include weed pressure, disease infection, and of particular interest to entomologists, insect herbivory. Soybean is targeted by a range of above and below ground pests which are primarily controlled by insecticides. Neonicotinoids are a recently popularized insecticide class that when applied as a seed treatment, can provide protection from early season pests. The most economically significant early season pest is threecornered alfalfa hopper, Spissistilus festinus (Say), whose …

Fine Mapping And Cloning Of The Major Seed Protein Quantitative Trait Loci On Soybean Chromosome 20, Christina E. Fliege, Russell A. Ward, Pamela Vogel, Hanh Nguyen, Truyen Quach, Ming Guo, João Paulo Gomes Viana, Lucas Borges Dos Santos, James Specht, Thomas Clemente, Matthew E. Hudson, Brian W. Diers

Department of Agronomy and Horticulture: Faculty Publications

Soybean [Glycine max (L.) Merr.] is a unique crop species because it has high levels of both protein and oil in its seed. Of the many quantitative trait loci (QTL) controlling soybean seed protein content, alleles of the cqSeed protein-003 QTL on chromosome 20 exert the greatest additive effect. The high-protein allele exists in both cultivated and wild soybean (Glycine soja Siebold & Zucc.) germplasm. Our objective was to fine map this QTL to enable positional-based cloning of its underlying causative gene(s). Fine mapping was achieved by developing and testing a series of populations in which the chromosomal region surrounding …

Field Validation Of A Farmer Supplied Data Approach To Close Soybean Yield Gaps In The Us North Central Region, José F. Andrade, Spyridon Mourtzinis, Juan I. Rattalino Edreira, Shawn P. Conley, John Gaska, Herman J. Kandel, Laura E. Lindsey, Seth Naeve, Scott Nelson, Maninder P. Singhi, Laura J. Thompson, James E. Specht, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

CONTEXT: Producer-reported data can be used to identify suites of management practices that lead to higher yield and profit. However, a rigorous validation of the approach in relation to its potential impact on farmer yield and profit is lacking.

OBJECTIVE: This study aimed to validate a producer-data approach on its capability to guide on-farm evaluation of management practices with greatest potential for increasing producer yield and profit. We show proof of concept using soybean in the North Central US region as a case study.

METHODS: We used a combination of regression tree analysis and a spatial framework to determine practices …

Direct Drilling Of Soybean In A Pensacola Bahiagrass Pasture In The Northwest Region Of Rio Grande Do Sul, Brazil, R. B. Medeiros, J. Riboldi, J. C. De Saibro, J. E. G. Zambra

IGC Proceedings (1977-2023)

The response of methods of soil preparation (M₁=conventional tillage, and with notillage using the following herbicides M₂=50% Paraquat plus 50% Orizalin; M₃=50% Paraquat plus 50% Diquat and M₄=Paracol (20% Paraquat plus 20 Diuron)) and row spacing (E₁=17 cm, E₂=24 cm, E₃=51 cm and E₄=68 cm) on soybean grain yield direct drilled in an eight-year-old grazed sward of Bahiagrass cv. Pensacola (Paspalum notatum var. saurae Parodi) were studied in southern of Brazil. The results showed that direct drilling of soybean on Pensacola accompanied by …

Forage Productivity Of Panicum Maximum Pastures In Two Different Agropastoral Systems, Tsutomu Kanno, Manuel C. M. Macedo, J. A. Bono, J. D. G. Santos Jr., M. R. Correa, L. G. R. Beretta

IGC Proceedings (1977-2023)

Forage productivity was evaluated for Panicum maximum pastures established after 4 years of soybean cultivation in the summer (PM-SO), and 4 years of rotation of soybeans in the summer and millet for winter grazing (PM-MI). In the PM-MI pasture, biomass and dry matter production were much lower than in the PM-SO, and the amount of copper and nitrogen in the top part of the plants in PM-MI were significantly lower than that in PM-SO. Thus, it was considered that the shortage of copper and nitrogen restricted photosynthesis and forage production in PM-MI.

Influence Of Planting Date, Maturity Group, Harvest Aids And Fungicide Application On Soybean (Glycine Max (L.) Seed Quality, Ana Priscila Campos

LSU Master's Theses

Field studies evaluated the influence of planting date, maturity group, and harvest timing on soybean yield and seed quality at the LSU AgCenter Northeast (NERS), Macon Ridge, and Dean Lee Research Stations in 2018-2020. In addition, the influence of harvest aid and fungicide application on seed quality impact from delayed harvest and environment was investigated at NERS in 2019 and 2020 in both field and environmentally controlled growth chambers. Soybean yield was maximized when maturity group IV and V soybean varieties were planted between Mid-April and Mid-May. Earlier and later planting dates did not result in maximized yield. Planting date …

Rhizosphere Microbiomes In A Historical Maize-Soybean Rotation System Respond To Host Species And Nitrogen Fertilization At The Genus And Subgenus Levels, Michael A. Meier, Martha G. Lopez-Guerrero, Ming Guo, Marty Schmer, Josh Herr, James Schnable, James R. Alfano, Jinliang Yang

Department of Agronomy and Horticulture: Faculty Publications

Root-associated microbes are key players in plant health, disease resistance, and nitrogen (N) use efficiency. It remains largely unclear how the interplay of biological and environmental factors affects rhizobiome dynamics in agricultural systems. In this study, we quantified the composition of rhizosphere and bulk soil microbial communities associated with maize (Zea mays L.) and soybean (Glycine max L.) in a long-term crop rotation study under conventional fertilization and low-N regimes. Over two growing seasons, we evaluated the effects of environmental conditions and several treatment factors on the abundance of rhizosphere- and soil-colonizing microbial taxa. Time of sampling, host plant species, …

Crop Response To Low-Dose Dicamba, Mason Castner

Graduate Theses and Dissertations

The introduction of dicamba-resistant (DR) soybean [Glycine max (L.) Merr.] and cotton (Gossypium hirsutum L.) followed by a label allowing over-the-top applications of dicamba in the 2017 provided growers an additional option for broadleaf weed control. Because non-DR soybean is sensitive to low concentrations of dicamba, postemergence dicamba applications present growers choosing to plant non-DR soybean with concerns of damage from off-target movement through physical drift and volatilization of the herbicide as well as tank-contamination from prior dicamba application. Consequences of low-dose dicamba exposure on sensitive vegetative and reproductive soybean have been well researched, but little is known regarding the …

Screening And Breeding Soybean For Flood Tolerance, Maria Roberta De Oliveira

Graduate Theses and Dissertations

Waterlogging can be detrimental to soybean [Glycine max (L.) Merr.] growth and development, with effects ranging from chlorosis and stunting to yield loss and plant death. Soybean responses to, and the effects of, waterlogging are dependent on the growth stage of the plant at the initiation of waterlogging. The objectives of this study were: (1) to assess the effectiveness of Genomic Selection (GS), Marker Assisted Selection (MAS) and Phenotypic Selection for flood tolerance at the progeny row stage as compared to random selection, for the development of high-yielding flood-tolerant lines; and (2) to compare field-screening and hydroponic greenhouse screening methodologies …

Comparing A Mixed Model Approach To Traditional Stability Estimators For Mapping Genotype By Environment Interactions And Yield Stability In Soybean [Glycine Max (L.) Merr.], Mary M. Happ, George L. Graef, Haichuan Wang, Reka Howard, Luis Posadas, David L. Hyten

Department of Agronomy and Horticulture: Faculty Publications

Identifying genetic loci associated with yield stability has helped plant breeders and geneticists begin to understand the role and influence of genotype by environment (GxE) interactions in soybean [Glycine max (L.) Merr.] productivity, as well as other crops. Quantifying a genotype’s range of performance across testing locations has been developed over decades with dozens of methodologies available. This includes directly modeling GxE interactions as part of an overall model for yield, as well as methods which generate overall yield “stability” values from multi-environment trial data. Correspondence between these methods as it pertains to the outcomes of genome wide association studies …

A Bumper Crop Of Snps In Soybean Through High-Density Genotyping-By-Sequencing (Hd-Gbs), Davoud Torkamaneh, Jerome Laroche, Brian Boyle, David L. Hyten, Fancois Belzile

Department of Agronomy and Horticulture: Faculty Publications

No abstract provided.

The Role Of The Auxin Biosynthesis And Signaling In Soybean Root Nodule Development, Mucahid Bozkus

Electronic Theses and Dissertations

Nitrogen(N) is one of the most important plant nutrients for plant growth and yield, however, its abundance in the soil is not sufficient for profitable crop production. The use of chemical fertilizers helps address soil N deficiency in agriculture. However, due to the environmental pollution resulting from excessive use of fertilizers, alternative forms of N for agriculture are a necessity. Leguminous plants such as soybean (Glycine max) form a symbiotic association with N-fixing rhizobia to meet their N demands. Legume-rhizobia symbiosis results in the formation of unique structures called nodules where rhizobia convert atmospheric nitrogen into plant usable forms, thus …

Development Of Mping-Based Activation Tags For Crop Insertional Mutagenesis, Alexander Johnson, Edward Mcassey, Stephanie Diaz, Jacod Reagin, Priscilla S. Redd, Daymond R. Parrilla, Hanh Nguyen, Adrian Stec, Lauren A.L. Mcdaniel, Thomas E. Clemente, Robert M. Stupar, Wayne A. Parrott, C. Nathan Hancock

Department of Agronomy and Horticulture: Faculty Publications

Modern plant breeding increasingly relies on genomic information to guide crop im- provement. Although some genes are characterized, additional tools are needed to effectively identify and characterize genes associated with crop traits. To address this need, the mPing element from rice was modified to serve as an activation tag to in- duce expression of nearby genes. Embedding promoter sequences in mPing resulted in a decrease in overall transposition rate; however, this effect was negated by using a hyperactive version of mPing called mmPing20. Transgenic soybean events carrying mPing-based activation tags and the appropriate transposase expression cassettes showed evidence of transposition. …

Development Of Mping-Based Activation Tags For Crop Insertional Mutagenesis, Alexander Johnson, Edward Mcassey, Stephanie Diaz, Jacob Reagin, Priscilla S. Redd, Daymond R. Parrilla, Hanh T. Nguyen, Adrian Stec, Lauren A.L. Mcdaniel, Thomas E. Clemente, Robert M. Stupar, Wayne A. Parrott, C Nathan Hancock

Department of Agronomy and Horticulture: Faculty Publications

Modern plant breeding increasingly relies on genomic information to guide crop improvement. Although some genes are characterized, additional tools are needed to effectively identify and characterize genes associated with crop traits. To address this need, the mPing element from rice was modified to serve as an activation tag to induce expression of nearby genes. Embedding promoter sequences in mPing resulted in a decrease in overall transposition rate; however, this effect was negated by using a hyperactive version of mPing called mmPing20. Transgenic soybean events carrying mPing-based activation tags and the appropriate transposase expression cassettes showed evidence of transposition. Expression analysis …

Association Mapping For Soybean (Glycine Max L. Merr.) Protein And Oil Content, Joseph Najjar

Graduate Theses and Dissertations

Soybean [Glycine Max (L.) Merrill] is an important economic crop because of its high content of seed protein and oil. Seed oil and protein content are quantitative inherited traits. The genetics of seed protein and oil levels have been extensively studied, with 367 QTL reported for protein and 475 QTL reported for oil to date. Validation of such QTLs, and identification of easily-automatable molecular markers around these QTL will aid the progression of breeding for such traits. The focus of this research was to discover novel and verify previously reported QTL related to protein and/or oil content via Genome-Wide Association …

Evaluasi Galur-Galur Mutan Kedelai Berdasarkan Daya Hasil Dan Ukuran Biji Di Jatinangor, Sumedang, Jawa Barat, Andrew Yoel, Meddy Rachmadi

Jurnal Kultivasi

Usaha pemuliaan tanaman kedelai saat ini sebagian besar berfokus pada identifikasi genotipe dengan hasil biji yang tinggi dan ukuran biji besar. Tujuan dari penelitian ini adalah untuk mengevaluasi kultivar kedelai dan kedelai mutan untuk daya hasil tinggi dan ukuran biji besar. Penelitian ini dilaksanakan dari September 2017 sampai Januari 2018 di Kebun percobaan Ciparanje Fakultas Pertanian UNP AD, Jatinangor, Jawa Barat. Rancangan percobaan yang digunakan adalah Rancangan Acak Kelompok (RAK) yang terdiri dari 20 perlakuan dalam 2 ulangan. Perlakuan terdiri dari 19 genotipe dan 1 kultivar cek. Data dianalisis Sidik Ragam dengan Uji F 5%, nilai beda dengan Uji Dunnet …

Sensitivity Of Enlisttm And Roundup Ready Xtend® Technologies To Auxin Herbicides And Comparison Of Resistance To Susceptible Cotton And Soybean Cultivars, James Rose

Graduate Theses and Dissertations

Increases in weed resistance have led to the development of new herbicide-resistant crop technologies, namely the Roundup Ready Xtend® and EnlistTM weed control systems. These new technologies provide resistance to applications of the synthetic auxins dicamba or 2,4-D, respectively, in traited cotton or soybean. It is unknown if there is any resistance to other herbicides within the synthetic auxin group (WSSA Group 4) in these traited crops. Experiments were conducted with auxin herbicides representing all five families within WSSA Group 4. Herbicides were applied either preemergence (PRE) or postemergence (POST) relative to the crop in a single application. Applications were …

Developing A High-Throughput Method To Screen Soybean Germplasm For Hypoxia Tolerance In Hydroponic Systems, Derrick Harrison

Graduate Theses and Dissertations

Soybean [Glycine max (Merr.)], the second most planted crop in the United States, is sensitive to field flooding due to depletion of oxygen and accumulation of CO2 in the rhizosphere. There is a need to breed cultivars that are adapted to areas prone to flooding, but field evaluations in the U.S. are limited because of time (one generation per year) and availability of resources (impermeable soils, irrigation, equipment to build levees). The purpose of this study was to develop and execute a protocol of germplasm screening for hypoxia tolerance using hydroponics in a controlled greenhouse environment. Germination rates and vigor …

Cover Cropping In Soybean-Corn Rotation System: Economic, Agronomic, And Soil Fertility Impact, Jose Rodolfo Mite

LSU Doctoral Dissertations

Planting winter-annual cover crops prevent soil erosion, reduces water runoff, and improves soil structure and soil quality. This research was conducted from 2017 to 2019 to evaluate the nutrient turnover of different species of cover crops in soils under different row crop production systems in Northeast and Central Louisiana. In Northeast Louisiana (Site 1, 2, and 3), treatments (cover crops and no cover crop) were arranged in a strip trial with three replications. At the Ben Hur Research Station, the treatments included three planting dates (September, October, and November) with [7 kg ha^-1 of phosphorus (P) and potassium (K)] …

Assessing Approaches For Stratifying Producer Fields Based On Biophysical Attributes For Regional Yield-Gap Analysis, Spyridon Mourtzinis, Patricio Grassini, Juan I. Rattalino Edreira, José F. Andrade, Peter M. Kyveryga, Shawn P. Conley

Department of Agronomy and Horticulture: Faculty Publications

Large databases containing producer field-level yield and management records can be used to identify causes of yield gaps. A relevant question is how to account for the diverse biophysical background (i.e., climate and soil) across fields and years, which can confound the effect of a given management practice on yield. Here we evaluated two approaches to group producer fields based on biophysical attributes: (i) a technology extrapolation domain spatial framework (‘TEDs’) that delineates regions with similar (long-term average) annual weather and soil water storage capacity and (ii) clusters based on field-specific soil properties and weather during each crop …

Soybean Response To Water: Trait Identification And Prediction, Shawn Jenkins

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The rising demand for soybean [Glycine Max (L.) Merrill] taken in consideration with current climatic trends accentuates the importance of improving soybean seed yield response per unit water (WP). To further our understanding of the quantitative WP trait, a multi-omic approach was implemented for improved trait identification and predictive modeling opportunities. Through the evaluation of two recombinant inbred line populations jointly totaling 439 lines subjected to contrasting irrigation treatments, informative agronomic, phenomic, and genomic associations were identified. Across both populations, relationships were identified between lodging at maturity (r = -0.58, H = 0.86), canopy to air temperature differential …

Insufficient Nitrogen Supply From Symbiotic Fixation Reduces Seasonal Crop Growth And Nitrogen Mobilization To Seed In Highly Productive Soybean Crops, Nicolas Cafaro La Menza, Juan Pablo Monzon, John L. Lindquist, Timothy J. Arkebauer, Johannes M.H. Knops, Murray Unkovich, James E. Specht, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Nitrogen (N) supply can limit the yields of soybean [Glycine max (L.) Merr.] in highly productive environments. To explore the physiological mechanisms underlying this limitation, seasonal changes in N dynamics, aboveground dry matter (ADM) accumula- tion, leaf area index (LAI) and fraction of absorbed radiation (fAPAR) were compared in crops relying only on biological N2 fixation and available soil N (zero-N treatment) versus crops receiving N fertilizer (full-N treatment). Experiments were conducted in seven high-yield environments without water limitation, where crops received optimal management. In the zero-N treatment, biological N2 fixation was not sufficient to meet the N demand of …

Mitigating Herbicide Impacts To Soybean, Grant Lawson Priess

Graduate Theses and Dissertations

The rapidity in evolution of herbicide-resistant weeds and the resulting cost to U.S. farmers demonstrate the need to responsibly steward the limited number of herbicides available in agricultural systems. To reduce weed emergence and likewise added selection pressures placed on herbicides, early-season crop canopy formation has been promoted. However, impacts to soybean following a potentially injurious herbicide application have not been thoroughly evaluated. Therefore, field experiments were conducted to determine whether: 1) soybean injury from metribuzin or flumioxazin delayed canopy formation or changed the incidence of pathogen colonization; 2) residual herbicides applied preplant reduced the potential for soybean injury and …

Arkansas Soybean Performance Tests 2019, J. F. Carlin, R. D. Bond, J. A. Still

Arkansas Agricultural Experiment Station Research Series

Soybean variety and strain performance tests are conducted each year in Arkansas by the University of Arkansas System Division of Agriculture’s Arkansas Crop Variety Improvement Program. The tests provide information to companies developing varieties and/or marketing seed within the State, and aid the Arkansas Cooperative Extension Service in formulating variety recommendations for soybean producers.

Integration Of Cover Crops Into Midwest Corn-Soybean Cropping Systems And Potential For Weed Suppression, Joshua S. Wehrbein

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Cover crops have potential to provide benefits to agricultural systems, such as improved soil productivity, nutrient scavenging, weed suppression, and livestock forage. There are several challenges associated with cover crop integration into traditional Midwest corn-soybean cropping systems. One of these challenges is timely establishment in the fall, which is limited by the relatively late harvest of corn and soybean. Cover crop effectiveness is related to the amount of biomass produced, thus maximizing the growth period in the fall is desired. To address this challenge, we evaluated the potential to utilize early-season soybean maturity groups (MGs) to allow for earlier soybean …

Understanding Nitrogen Limitation In Soybean, Nicolas Cafaro La Menza

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Meeting soybean demand on existing cropland area for a global population of 9.7 billion people by the year 2050 requires narrowing the existing gap between average producer yield and yield potential. Soybean relies on two sources on nitrogen (N): biological N₂ fixation and indigenous soil N supply. As soybean yield continues to increase, it seems critical to know if there is a yield level at which potential contribution of indigenous nitrogen sources and fixation becomes insufficient to meet crop N requirements for high yields, while still maintaining or increasing protein and oil concentration. This study evaluated N limitation across …

Respons Kedelai Akibat Jarak Tanam Dan Konsentrasi Giberelin Pada Tanah Inceptisol Jatinangor, Aep Wawan Irwan, Agus Wahyudin, Toto Sunarto

Jurnal Kultivasi

Teknik budidaya untuk meningkatkan produktivitas kedelai antara lain penggunaan jarak tanam yang tepat dan penambahan input berupa giberelin. Penelitian ini bertujuan untuk memperoleh jarak tanam dan konsentrasi yang tepat agar pertumbuhan dan hasil meningkat. Percobaan dilakukan pada bulan Juli sampai Oktober 2017 di Kebun Percobaan Ciparanje, Fakultas Pertanian Universitas Padjadjaran, dengan ketinggian tempat yaitu ± 780 meter di atas permukaan laut. Percobaan dilakukan dengan menggunakan Rancangan Acak Kelompok pola faktorial, dengan tiga ulangan. Faktor I adalah jarak tanam, terdiri dari 3 taraf, yaitu: jarak tanam 25 cm X 25 cm, jarak tanam 15 cm X 15 cm X 40 cm …

Effect Of Soil-Applied Protoporphyrinogen Oxidase Inhibitor Herbicides On Soybean Seedling Disease, Nicholas J. Arneson

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Seedling disease is one the most economically important diseases of soybean in the United States. It is commonly caused by Fusarium spp., Rhizoctonia solani, Pythium spp., and Phytophthora sojae, alone, or together as a disease complex. Fungicide seed treatments continue to provide the most consistent management of seedling diseases. Soil-applied protoporphyrinogen oxidase (PPO) inhibitor herbicides are used preemergence in soybean production to manage several broadleaf weeds. Applications of PPO-inhibitors can result in phytotoxic injury to soybean when environmental conditions are not favorable for soybean growth. These environmental conditions can favor seedling disease development as well. In this thesis, two …

Response Surface Analysis Of Genomic Prediction Accuracy Values Using Quality Control Covariates In Soybean, Diego Jarquin, Reka Howard, George L. Graef, Aaron Lorenz

Department of Agronomy and Horticulture: Faculty Publications

An important and broadly used tool for selection purposes and to increase yield and genetic gain in plant breeding programs is genomic prediction (GP). Genomic prediction is a technique where molecular marker information and phenotypic data are used to predict the phenotype (eg, yield) of individuals for which only marker data are available. Higher prediction accuracy can be achieved not only by using efficient models but also by using quality molecular marker and phenotypic data. The steps of a typical quality control (QC) of marker data include the elimination of markers with certain level of minor allele frequency (MAF) and …

Generating High Density, Low Cost Genotype Data In Soybean [Glycine Max (L.) Merr.], Mary M. Happ, Haichuan Wang, George L. Graef, David L. Hyten

Department of Agronomy and Horticulture: Faculty Publications

Obtaining genome-wide genotype information for millions of SNPs in soybean [Glycine max (L.) Merr.] often involves completely resequencing a line at 5X or greater coverage. Currently, hundreds of soybean lines have been resequenced at high depth levels with their data deposited in the NCBI Short Read Archive. This publicly available dataset may be leveraged as an imputation reference panel in combination with skim (low coverage) sequencing of new soybean genotypes to economically obtain high-density SNP information. Ninety-nine soybean lines resequenced at an average of 17.1X were used to generate a reference panel, with over 10 million SNPs called using …