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2022

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Articles 271 - 300 of 670

Full-Text Articles in Agricultural Science

Two Fingerprinting Sets For Humulus Lupulus Based On Kasp And Microsatellite Markers, Mandie Driskill, Katie Pardee, Kim E. Hummer, Jason D. Zurni, Keenan L. Amundsen, Annette Wiles, Claudia Wiedowi, Josef Patza, John A. Henningi, Nahla V. Bassili Apr 2022

Two Fingerprinting Sets For Humulus Lupulus Based On Kasp And Microsatellite Markers, Mandie Driskill, Katie Pardee, Kim E. Hummer, Jason D. Zurni, Keenan L. Amundsen, Annette Wiles, Claudia Wiedowi, Josef Patza, John A. Henningi, Nahla V. Bassili

Department of Agronomy and Horticulture: Faculty Publications

Verification of clonal identity of hop (Humulus lupulus L.) cultivars within breeding programs and germplasm collections is vital to conserving genetic resources. Accurate and economic DNA-based tools are needed in dioecious hop to confirm identity and parentage, neither of which can be reliably determined from morphological observations. In this study, we developed two fingerprinting sets for hop: a 9-SSR fingerprinting set containing high-core repeats that can be run in a single PCR reaction and a kompetitive allele specific PCR (KASP) assay of 25 single nucleotide polymorphisms (SNPs). The SSR set contains a sex-linked primer pair, HI-AGA7, that was used …


Marker-Trait Association Mapping Of Sorghum Mosaic Virus Resistance In Sugarcane, Chenie Zamora Apr 2022

Marker-Trait Association Mapping Of Sorghum Mosaic Virus Resistance In Sugarcane, Chenie Zamora

LSU Master's Theses

Mosaic is a potentially devastating disease of sugarcane that had severe economic impact on Louisiana’s sugarcane industry in the 1920’s and has caused periodic problems ever since. The disease is vectored by migrating aphids that transmit Sugarcane mosaic virus (SCMV) and Sorghum mosaic virus (SrMV) in a non-persistent manner. Mosaic in Louisiana is currently caused by strains of SrMV. Mosaic has been controlled primarily by developing resistant cultivars. Recently, mosaic was detected in some near-commercial clones in the cultivar selection program. This prompted extensive screening of breeding program parent populations that detected infiltration of susceptibility and revealed the need for …


Re-Evaluation Of Late Season Action Thresholds And The Effect Of Seed Treatments On Early Season Colonization Of Threecornered Alfalfa Hopper, Spissistilus Festinus (Say), In Louisiana Soybean, Glycine Max (L) Merr, Tyler Ray Tagle Musgrove Apr 2022

Re-Evaluation Of Late Season Action Thresholds And The Effect Of Seed Treatments On Early Season Colonization Of Threecornered Alfalfa Hopper, Spissistilus Festinus (Say), In Louisiana Soybean, Glycine Max (L) Merr, Tyler Ray Tagle Musgrove

LSU Master's Theses

Soybean, Glycine max (L.) Merr, is considered the most economically important oil and feed crop in the US and is grown on nearly 35,000,000 ha on an annual basis. Factors that limit yield include weed pressure, disease infection, and of particular interest to entomologists, insect herbivory. Soybean is targeted by a range of above and below ground pests which are primarily controlled by insecticides. Neonicotinoids are a recently popularized insecticide class that when applied as a seed treatment, can provide protection from early season pests. The most economically significant early season pest is threecornered alfalfa hopper, Spissistilus festinus (Say), whose …


Development Of Alternative Materials And Strategies For Enhancing Rice Health, Jobelle S. Bruno Apr 2022

Development Of Alternative Materials And Strategies For Enhancing Rice Health, Jobelle S. Bruno

LSU Master's Theses

Bacterial panicle blight (BPB) and sheath blight (ShB) are economically important diseases of rice (Oryza sativa) in Louisiana and other rice-growing regions around the world. However, there are challenges in the current disease management practices for these diseases. Thus, the main goal of this study is to identify new materials and their application methods that effectively suppress BPB and ShB. To achieve this goal, we evaluated the effect of various materials and application methods against the rice diseases. In 2020 and 2021, various materials, such as ascorbic acid (AA), N-acetylcysteine, chitosan, the avirulent strain of Burkholderia glumae 257sh-1 …


Morfologi Dan Kandungan Flavonoid Total Bunga Telang Di Berbagai Ketinggian Tempat Tumbuh Berbeda, Hawari, Bambang Pujiasmanto, Eddy Triharyanto Apr 2022

Morfologi Dan Kandungan Flavonoid Total Bunga Telang Di Berbagai Ketinggian Tempat Tumbuh Berbeda, Hawari, Bambang Pujiasmanto, Eddy Triharyanto

Jurnal Kultivasi

Bunga telang (Clitoria ternatea L) merupakan salah satu tanaman leguminoceae yang memiliki manfaat farmakologis, namun sebagian besar pemanenannya berasal dari alam dan belum dibudidayakan secara luas. Oleh karena itu, perlu diadakan suatu penelitian spesifik terkait morfologi dan kandungan flavonoid bunga telang untuk dijadikan tanaman budidaya serta mengkaji kesesuaian lingkungan untuk budidayanya. Tujuan riset ini untuk mengkaji karakter morfologi dan kandungan flavonoid bunga telang di berbagai ketinggian. Survei dilaksanakan di lokasi berbeda, yaitu dataran rendah (Karangasem, Jeyengan, dan Purwosari) dan dataran tinggi Ngargoyoso, mulai bulan Februari sampai April 2021. Lokasi survei dipilih dengan metode acak memihak (purpose random sampling) melalui pendekatan …


Pengaruh Rizobakteri Indigenous Terhadap Serangan Penyakit Budok, Enzim Peroksidase, Dan Pertumbuhan Setek Nilam Aceh, Halimursyadah, Siti Hafsah, Siti Nurminah Nasution, Zuraida Apr 2022

Pengaruh Rizobakteri Indigenous Terhadap Serangan Penyakit Budok, Enzim Peroksidase, Dan Pertumbuhan Setek Nilam Aceh, Halimursyadah, Siti Hafsah, Siti Nurminah Nasution, Zuraida

Jurnal Kultivasi

Rizobakteri adalah kelompok mikroba yang aktif dan agressif mengkolonisasi area rizosfir. Mikroba ini mampu berperan sebagai biofertilizer, biostimulan, dan bioprotektan. Tujuan penelitian ini adalah untuk mengetahui jenis isolat rizobakteri indigenous yang berpotensi sebagai agen biokontrol pada patogen Synchytrium pogostemonis penyebab penyakit budok pada tanaman nilam Aceh (Pogostemon cablin Benth.). Penelitian dilaksanakan di Laboratorium Ilmu dan Teknologi Benih Jurusan Agroteknologi, Fakultas Pertanian, Universitas Syiah Kuala dan Kebun Percobaan Sektor Timur Fakultas Pertanian, Darussalam Banda Aceh. Waktu pelaksanaan penelitian dimulai pada bulan Januari sampai dengan Mei 2021. Percobaan ini disusun berdasarkan Rancangan Acak Lengkap dengan 15 perlakuan yang terdiri atas 14 perlakuan …


Bioactive Volatiles From Push-Pull Companion Crops Repel Fall Armyworm And Attract Its Parasitoids, Islam S. Sobhy, Amanuel Tamiru, Xavier Chiriboga Morales, Dickens Nyagol, Duncan Cheruiyot, Frank Chidawanyika, Sevgan Subramanian, Charles A.O. Midega, Toby J.A. Bruce, Zeyaur R. Khan Apr 2022

Bioactive Volatiles From Push-Pull Companion Crops Repel Fall Armyworm And Attract Its Parasitoids, Islam S. Sobhy, Amanuel Tamiru, Xavier Chiriboga Morales, Dickens Nyagol, Duncan Cheruiyot, Frank Chidawanyika, Sevgan Subramanian, Charles A.O. Midega, Toby J.A. Bruce, Zeyaur R. Khan

All Peer-Reviewed Publications

Fall armyworm, Spodoptera frugiperda, is a serious invasive pest in Africa but “Push-Pull” companion cropping can substantially reduce infestation. Here, we elucidate the underpinning chemical ecology mechanisms. We hypothesized that companion crop volatiles repel herbivores (push) while attracting natural enemies (pull). Headspace volatiles collected from companion plants (Desmodium intortum, Desmodium uncinatum, Brachiaria Mulato II) were used in bioassays and electrophysiological recordings with S. frugiperda and parasitoid wasps. Insect populations, plant damage and herbivore parasitism were assessed in field plots. Coupled GC-electroantennogram (GC-EAG) recordings showed robust responses to certain aromatic and terpenoid volatile compounds. In wind tunnel bioassays, maize volatiles mixed …


Pemilihan Teknik Aplikasi Dan Dosis Pupuk Hayati Pelarut Kalium Untuk Meningkatkan Serapan Kalium Dan Pertumbuhan Tanaman Jagung Pada Tanah Inceptisols, Diyan Herdiyantoro, Tualar Simarmata, Mieke Rochimi Setiawati, Nenny Nurlaeny, Benny Joy, Mahfud Arifin, Jajang Sauman Hamdani, Iin Handayani Apr 2022

Pemilihan Teknik Aplikasi Dan Dosis Pupuk Hayati Pelarut Kalium Untuk Meningkatkan Serapan Kalium Dan Pertumbuhan Tanaman Jagung Pada Tanah Inceptisols, Diyan Herdiyantoro, Tualar Simarmata, Mieke Rochimi Setiawati, Nenny Nurlaeny, Benny Joy, Mahfud Arifin, Jajang Sauman Hamdani, Iin Handayani

Jurnal Kultivasi

Salah satu strategi yang diterapkan pada pupuk hayati untuk menunjukkan efek positif pada tanaman yang diinokulasi adalah pemilihan teknik aplikasi dan dosis yang tepat, baik pada tanah, benih, atau kombinasi keduanya. Tujuan dari percobaan ini adalah mendapatkan teknik aplikasi dan dosis pupuk hayati pelarut K yang memberikan hasil terbaik terhadap penyerapan K dan pertumbuhan tanaman jagung (Zea mays L.) pada Inceptisols Jatinangor. Percobaan dilaksanakan pada November 2018-Januari 2019 di rumah kaca Fakultas Pertanian Universitas Padjadjaran. Percobaan menggunakan rancangan acak kelompok dengan 9 perlakuan dan 3 kali ulangan. Perlakuan terdiri dari tanpa perlakuan (kontrol), aplikasi pada benih 400 g.ha-1 dan 800 …


Potensi Hasil Dan Nutrisi Beberapa Genotipe Tanaman Sorgum Lokal Jawa Timur Sebagai Calon Tetua Persilangan, Maftuchah, Dian Puji Rahayu, Agus Zainudin, Sulistyawati, Hendry Sulistiyanto Apr 2022

Potensi Hasil Dan Nutrisi Beberapa Genotipe Tanaman Sorgum Lokal Jawa Timur Sebagai Calon Tetua Persilangan, Maftuchah, Dian Puji Rahayu, Agus Zainudin, Sulistyawati, Hendry Sulistiyanto

Jurnal Kultivasi

Tanaman sorgum (Sorghum bicolor (L.) Moench) merupakan tanaman sumber pangan, pakan ternak, dan bahan baku industri yang memiliki potensi untuk dikembangkan di Indonesia. Permasalahan utama dalam komoditas ini adalah masih terbatasnya varietas lokal yang sesuai dengan lingkungan di Indonesia sehingga perlu diupayakan pencarian genotipe lokal sorgum sebagai calon tetua persilangan. Tujuan kegiatan ini adalah untuk mendapatkan informasi potensi daya hasil dan kualitas produk berbagai genotipe sorgum lokal Jawa Timur sebagai calon tetua persilangan untuk menghasilkan varietas unggul. Penelitian ini dilaksanakan di lahan percobaan Desa Purutrejo, Kecamatan Purworejo, Kota Pasuruan-Jawa Timur. Bahan yang digunakan dalam penelitian ini yaitu 9 genotipe tanaman …


Editorial: Accelerating Genetic Gains In Pulses, Aditya Pratap, Shiv Kumar, Patricia L. Polowick, Matthew W. Blair, Michael Baum Apr 2022

Editorial: Accelerating Genetic Gains In Pulses, Aditya Pratap, Shiv Kumar, Patricia L. Polowick, Matthew W. Blair, Michael Baum

Agricultural and Environmental Sciences Faculty Research

No abstract provided.


Viability Test Of Halotolerant Nitrogen-Fixing Rhizobacteria On Different Carrier Composition And Application Dosage Of Nitrogen Biofertilizer To Increase Rice Growth On Saline Ecosystems, Fiqriah Hanum Khumairah, Fachruddin Azwari, Mieke Rochimi Setiawati, Betty Natalie Fitriatin, Tualar Simarmata Apr 2022

Viability Test Of Halotolerant Nitrogen-Fixing Rhizobacteria On Different Carrier Composition And Application Dosage Of Nitrogen Biofertilizer To Increase Rice Growth On Saline Ecosystems, Fiqriah Hanum Khumairah, Fachruddin Azwari, Mieke Rochimi Setiawati, Betty Natalie Fitriatin, Tualar Simarmata

Jurnal Kultivasi

The use of saline soils as productive agricultural land poses major challenges. The utilization of nitrogen biofertilizer with halotolerant N-fixing rhizobacteria as the active material at the right dosage can increase soil productivity and support plant growth. The aim of this study was to obtain the composition of the carrier material that can maintain rhizobacteria viability, water content, and pH of nitrogen biofertilizer and to obtain the right dosage to increase the growth of rice plants in saline ecosystems. The research location was at Microbiology Laboratory of CV Bintang Asri Arthauly, Bandung and greenhouse of Jayamukti Village, Banyusari District, Karawang …


Perbandingan Daya Hasil Dan Toleransi Naungan Berbagai Genotipe Jagung Padjadjaran Pada Naungan Eukaliptus, Adilah Nurul Fitrah, Nono Carsono, Dedi Ruswandi Apr 2022

Perbandingan Daya Hasil Dan Toleransi Naungan Berbagai Genotipe Jagung Padjadjaran Pada Naungan Eukaliptus, Adilah Nurul Fitrah, Nono Carsono, Dedi Ruswandi

Jurnal Kultivasi

Kebutuhan jagung sebagai bahan pangan, pakan dan industri selalu meningkat, namun terdapat kendala dalam produksi jagung domestik, yaitu konversi lahan pertanian. Sistem agroforestri eukaliptus-jagung dapat menjadi alternatif yang digunakan untuk pengembangan jagung. Tujuan penelitian ini untuk mengidentifikasi daya hasil, mengestimasi nilai indeks toleransi, dan menyeleksi galur jagung Padjadjaran yang toleran terhadap naungan Eucalyptus sp. Penelitian ini dilaksanakan pada April – November 2019 di Sanggar Penelitian Latihan dan Pengembangan Pertanian (SPLPP) Fakultas Pertanian Universitas Padjadjaran, Bandung. Rancangan percobaan menggunakan rancangan petak terbagi (Split plot) dengan dua faktor (naungan dan genotipe) dan tiga ulangan. Petak utama adalah faktor naungan yang terdiri dari …


Trigonella Foenum-Graecum Methanolic Extract On Isolated Smooth Muscles And Acetylcholinesterase Enzyme: An In Vitro And Mechanistic In Silico Investigation, Muhammad Nabeel Ghayur, Mohnad Abdalla, Asaad Khalid, Saeed Ahmad, Anwar Gilani Apr 2022

Trigonella Foenum-Graecum Methanolic Extract On Isolated Smooth Muscles And Acetylcholinesterase Enzyme: An In Vitro And Mechanistic In Silico Investigation, Muhammad Nabeel Ghayur, Mohnad Abdalla, Asaad Khalid, Saeed Ahmad, Anwar Gilani

Department of Biological & Biomedical Sciences

Results: When tested on the baseline of isolated tissues, Tfg.Cr was devoid of any activity (stimulant or relaxant) till 10 mg/ml. This is an interesting finding, keeping in mind that the fenugreek seeds are used to alleviate constipation and diarrhoea. When Tfg.Cr was tried for any potential AChE inhibitory activity, it did show an inhibitory effect in increasing concentrations (47-380 μg/ml). This inhibitory effect was comparable to the effect produced by a standard AChE inhibitor physostigmine. One of the known fenugreek constituents, diosgenin, was also tested, and it also showed an AChE inhibitory effect in a concentration-dependent manner (11-190 …


Variation In Bacterial Community Structure Under Long-Term Fertilization, Tillage, And Cover Cropping In Continuous Cotton Production, Ning Duan, Lidong Li, Xiaolong Liang, Aubrey Fine, Jie Zhuang, Mark Radosevich, Sean M. Schaeffer Apr 2022

Variation In Bacterial Community Structure Under Long-Term Fertilization, Tillage, And Cover Cropping In Continuous Cotton Production, Ning Duan, Lidong Li, Xiaolong Liang, Aubrey Fine, Jie Zhuang, Mark Radosevich, Sean M. Schaeffer

Department of Agronomy and Horticulture: Faculty Publications

Agricultural practices alter the structure and functions of soil microbial community. However, few studies have documented the alterations of bacterial communities in soils under long-term conservation management practices for continuous crop production. In this study, we evaluated soil bacterial diversity using 16S rRNA gene sequencing and soil physical and chemical properties within 12 combinations of inorganic N fertilization, cover cropping, and tillage throughout a cotton production cycle. Soil was collected from field plots of the West Tennessee Agriculture Research and Education Center in Jackson, TN, United States. The site has been under continuous cotton production for 38 years. A total …


Considerations For Establishing Silvopastures On Wooded Sites, Brett Chedzoy, Ashley Conway, John Fike, Kate Macfarland Apr 2022

Considerations For Establishing Silvopastures On Wooded Sites, Brett Chedzoy, Ashley Conway, John Fike, Kate Macfarland

Agroforestry Notes (USDA-NAC)

Like other conservation and production practices, silvopasture management is not the right fit for every site or every land manager. High quality woodlands with high native species diversity are generally not a good starting point for silvopasture establishment. However, silvopasture provides an opportunity for active forest management on other sites that have been neglected or poorly managed with undesirable species composition, invasive species concerns, and other challenges. In some situations, silvopasture management can be used to aid in ecosystem restoration or fuels mitigation. The land manager and others in the silvopasture team should consider natural resource issues highlighted in this …


Pestfacts Wa Issue 01 - April 2022, Cindy L. Webster, Svetlana Micic, Saleh Adnan, Janette Pratt, Jean Galloway, Adam H. Sparks, Jeff Russell Apr 2022

Pestfacts Wa Issue 01 - April 2022, Cindy L. Webster, Svetlana Micic, Saleh Adnan, Janette Pratt, Jean Galloway, Adam H. Sparks, Jeff Russell

PestFacts WA

PestFacts WA Issue 01 - April 2022 contents:

  • What to expect from mollusc pests after a hot dry summer
  • Meet our new team member – Dr Saleh Adnan
  • Canola blackleg risk forecasts
  • Have you checked out the new Grains Farm Biosecurity website?


Drivers And Barriers Of The Transition To Regenerative Agriculture Within The Eu’S Common Agricultural Policy Reform: Comparative Analysis With The Us Farm Bill, Samantha Gish Apr 2022

Drivers And Barriers Of The Transition To Regenerative Agriculture Within The Eu’S Common Agricultural Policy Reform: Comparative Analysis With The Us Farm Bill, Samantha Gish

Independent Study Project (ISP) Collection

In the wake of multiple crises, such as climate change and international conflict, there is increased urgency to ensure a stable food system. Additionally, changing priorities of citizens have fostered the desire for sustainable production of food. One innovative method of food production is regenerative agriculture and in this practice the main goals are to increase system resilience, improve soil and sequester carbon. This is done through practices such as no tilling, cover and intercropping, and incorporation of livestock into crop fields. Although great in theory, these practices go against traditional agricultural practices and therefore the policy currently in place …


Evaluating Traits Influencing Hybrid Wheat Seed Production Using A Double Haploid Population Derived From Freeman × Camelot, Emre Karahan Apr 2022

Evaluating Traits Influencing Hybrid Wheat Seed Production Using A Double Haploid Population Derived From Freeman × Camelot, Emre Karahan

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Hybrid wheat (Triticum aestivum L.) cultivars are preferred for their advanced agronomic traits such as a yield improvement increase up to 20%. However, hybrid cultivars remain difficult to produce on a commercial scale due to inadequate pollen dispersal, the closed nature of the wheat floret and the high cost of inducing sterility or restoring fertility in cleistogamous wheat. Redesigning parent-specific traits and understanding their potential interactions with related agronomic traits are needed to breed improved male lines in hybrid seed production fields. To better understand the genetic control of anther extrusion (AE), 174 double haploid lines derived from Freeman …


Cattle Diet Selection During The Growing Season On Upland Sandhills Rangelands, Alejandro Orozco-Lopez Apr 2022

Cattle Diet Selection During The Growing Season On Upland Sandhills Rangelands, Alejandro Orozco-Lopez

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The Sandhills is a diverse and complex ecosystem comprised of different topographic positions (i.e. slopes and interdunes) that influence grazing distribution, plant species composition, and cattle diet selection. The first objective of this study was to evaluate how grazing intensity influences species composition on slopes and interdunes on native rangeland within the Hillside pasture (160 ha) at the UNL Gudmundsen Sandhill’s Laboratory (GSL). The second objective of this study was to evaluate forage quality of individual species from three plant functional groups (i.e. warm-season grasses, cool-season grasses, and forbs/shrubs) on native rangeland within the Hillside pasture (160 ha) at GSL. …


Fine Mapping And Cloning Of The Major Seed Protein Quantitative Trait Loci On Soybean Chromosome 20, Christina E. Fliege, Russell A. Ward, Pamela Vogel, Hanh Nguyen, Truyen Quach, Ming Guo, João Paulo Gomes Viana, Lucas Borges Dos Santos, James Specht, Thomas Clemente, Matthew E. Hudson, Brian W. Diers Apr 2022

Fine Mapping And Cloning Of The Major Seed Protein Quantitative Trait Loci On Soybean Chromosome 20, Christina E. Fliege, Russell A. Ward, Pamela Vogel, Hanh Nguyen, Truyen Quach, Ming Guo, João Paulo Gomes Viana, Lucas Borges Dos Santos, James Specht, Thomas Clemente, Matthew E. Hudson, Brian W. Diers

Department of Agronomy and Horticulture: Faculty Publications

Soybean [Glycine max (L.) Merr.] is a unique crop species because it has high levels of both protein and oil in its seed. Of the many quantitative trait loci (QTL) controlling soybean seed protein content, alleles of the cqSeed protein-003 QTL on chromosome 20 exert the greatest additive effect. The high-protein allele exists in both cultivated and wild soybean (Glycine soja Siebold & Zucc.) germplasm. Our objective was to fine map this QTL to enable positional-based cloning of its underlying causative gene(s). Fine mapping was achieved by developing and testing a series of populations in which the chromosomal region surrounding …


Measuring And Modelling Crop Yield Losses Due To Invasive Insect Pests Under Climate Change, Henri Ez Tonnang, Bonoukpoè M. Sokame, Elfatih M. Abdel-Rahman, Thomas Dubois Apr 2022

Measuring And Modelling Crop Yield Losses Due To Invasive Insect Pests Under Climate Change, Henri Ez Tonnang, Bonoukpoè M. Sokame, Elfatih M. Abdel-Rahman, Thomas Dubois

All Peer-Reviewed Publications

Climate change and agriculture are strongly correlated, and the fast pace of climate change will have impacts on agroecosystems and crop productivity. This review summarizes potential impacts of rising temperatures and atmospheric CO2 concentrations on insect pest-crop interactions and provides two-way approaches for integrating these impacts into crop models for sustainable pest management strategies designing. Rising temperatures and CO2 levels affect insect physiology, accelerate their metabolism and increase their consumption, ultimately increasing population densities, which result in greater crop injury and damage, and yield loss. Whereas these direct effects are empirically demonstrated for temperature rises, they are less straightforward for …


Organic Maize And Bean Farming Enhances Free-Living Nematode Dynamics In Sub-Saharan Africa, Janet G. Atandi, Noah Adamtey, Agnes W. Kiriga, Edward N. Karanja, Martha W. Musyoka, Felix M. Matheri, Chrysantus M. Tanga, Danny L. Coyne, Komi K.M. Fiaboe, David Bautze, Solveig Haukeland Apr 2022

Organic Maize And Bean Farming Enhances Free-Living Nematode Dynamics In Sub-Saharan Africa, Janet G. Atandi, Noah Adamtey, Agnes W. Kiriga, Edward N. Karanja, Martha W. Musyoka, Felix M. Matheri, Chrysantus M. Tanga, Danny L. Coyne, Komi K.M. Fiaboe, David Bautze, Solveig Haukeland

All Peer-Reviewed Publications

Despite their important ecological roles for soil health and soil fertility, free-living nematodes (FLN) have received relatively limited research attention. The present study evaluated the community structure and diversity of FLN in a field setting. The experiments were conducted in on-farm and on-station field plots sown to maize (Zea mays) and beans (Phaseolus vulgaris) under four cropping practices. These farming systems included organic (compost and biopesticide use), conventional (synthetic fertilizer and pesticide applications), farmer practice (organic and synthetic amendments) and a control (non-amended plots). Nineteen genera of free living nematodes, belonging to bacterivores, fungivores, omnivores and predators were recorded. Among …


Microbiome Variation Across Populations Of Desert Halophyte Zygophyllum Qatarensis, Abdul Latif Khan, Lucas Dantas Lopes, Saqib Bilal, Sajjad Asaf, Kerri M. Crawford, Venkatesh Balan, Ahmed Al-Rawahi, Ahmed Al-Harrasi, Daniel P. Schachtman Mar 2022

Microbiome Variation Across Populations Of Desert Halophyte Zygophyllum Qatarensis, Abdul Latif Khan, Lucas Dantas Lopes, Saqib Bilal, Sajjad Asaf, Kerri M. Crawford, Venkatesh Balan, Ahmed Al-Rawahi, Ahmed Al-Harrasi, Daniel P. Schachtman

Department of Agronomy and Horticulture: Faculty Publications

Microbial symbionts play a significant role in plant health and stress tolerance. However, few studies exist that address rare species of core-microbiome function during abiotic stress. In the current study, we compared the microbiome composition of succulent dwarf shrub halophyte Zygophyllum qatarensis Hadidi across desert populations. The results showed that rhizospheric and endosphere microbiome greatly varied due to soil texture (sandy and gravel). No specific bacterial amplicon sequence variants were observed in the core-microbiome of bulk soil and rhizosphere, however, bacterial genus Alcaligenes and fungal genus Acidea were abundantly distributed across root and shoot endospheres. We also analyzed major nutrients …


Microbiome Variation Across Populations Of Desert Halophyte Zygophyllum Qatarensis, Abdul Latif Khan, Lucas Dantas Lopes, Saqib Bilal, Sajjad Asaf, Kerri M. Crawford, Venkatesh Balan, Ahmed Al-Rawahi, Ahmed Al-Harrasi, Daniel P. Schachtman Mar 2022

Microbiome Variation Across Populations Of Desert Halophyte Zygophyllum Qatarensis, Abdul Latif Khan, Lucas Dantas Lopes, Saqib Bilal, Sajjad Asaf, Kerri M. Crawford, Venkatesh Balan, Ahmed Al-Rawahi, Ahmed Al-Harrasi, Daniel P. Schachtman

Department of Agronomy and Horticulture: Faculty Publications

Microbial symbionts play a significant role in plant health and stress tolerance. However, few studies exist that address rare species of core-microbiome function during abiotic stress. In the current study, we compared the microbiome composition of succulent dwarf shrub halophyte Zygophyllum qatarensis Hadidi across desert populations. The results showed that rhizospheric and endosphere microbiome greatly varied due to soil texture (sandy and gravel). No specific bacterial amplicon sequence variants were observed in the core-microbiome of bulk soil and rhizosphere, however, bacterial genus Alcaligenes and fungal genus Acidea were abundantly distributed across root and shoot endospheres. We also analyzed major nutrients …


Management Strategies And Distribution Of Aphanomyces Root Rot Of Alfalfa (Medicago Sativa), A Continuing Threat To Forage Production In The United States, Jennifer M. Giles, Conner L. Tordsen, Travis R. Rebstock, Bruna Bucciarelli, Deborah A. Samac, Andrew E. Sathoff Mar 2022

Management Strategies And Distribution Of Aphanomyces Root Rot Of Alfalfa (Medicago Sativa), A Continuing Threat To Forage Production In The United States, Jennifer M. Giles, Conner L. Tordsen, Travis R. Rebstock, Bruna Bucciarelli, Deborah A. Samac, Andrew E. Sathoff

Research & Publications

Alfalfa (Medicago sativa) is one of several legumes that is affected by Aphanomyces root rot (ARR) caused by Aphanomyces euteiches. Symptoms of ARR on alfalfa seedlings include a yellow-grey discolouration of roots, rotting and loss of lateral roots, stunted growth, chlorotic foliage and reduction of nitrogen-producing nodules on roots. Infection can also occur on adult plants leading to loss of lateral roots and nodules. At the seedling stage, ARR decreases alfalfa stand establishment, and field longevity is reduced when adult plants are infected. A. euteiches is an oomycete pathogen that has motile zoospores and thick-walled oospores that …


Extreme Development Of Dragon Fruit Agriculture With Nighttime Lighting In Southern Vietnam, Shenyue Jia, Son V. Nghiem, Seung-Hee Kim, Laura Krauser, Andrea E. Gaughan, Forest R. Stevens, Menas Kafatos, Khanh D. Ngo Mar 2022

Extreme Development Of Dragon Fruit Agriculture With Nighttime Lighting In Southern Vietnam, Shenyue Jia, Son V. Nghiem, Seung-Hee Kim, Laura Krauser, Andrea E. Gaughan, Forest R. Stevens, Menas Kafatos, Khanh D. Ngo

Institute for ECHO Faculty Books and Book Chapters

Dragon fruit is widely grown in Southeast Asia and other tropical or subtropical regions. As a high-value cash crop ideal for exportation, dragon fruit cultivation has boomed during the past decade in southern Vietnam. Light supplementing during the winter months using artificial lighting sources is a widely adopted cultivation technique to boost productivity in the major dragon fruit planting regions of Vietnam. The application of electric lighting at night leads to a significant increase of nighttime light (NTL) observable by satellite sensors. The strong seasonality signal of NTL in dragon fruit cultivation enables identifying dragon fruit plantations using NTL images. …


Seabem: An Artificial Intelligence Powered Web Application To Predict Cover Crop Biomass, Aime Christian Tuyishime, Andrea Basche Mar 2022

Seabem: An Artificial Intelligence Powered Web Application To Predict Cover Crop Biomass, Aime Christian Tuyishime, Andrea Basche

Honors Program: Senior Projects (Public)

SEABEM, the Stacked Ensemble Algorithms Biomass Estimator Model, is a web application with a stacked ensemble of Machine Learning (ML) algorithms running on the backend to predict cover crop biomass for locations in Sub-Saharan. The SEABEM model was developed using a previously developed database of crop growth and yield that included site characteristics such as latitude, longitude, soil texture (sand, silt, and clay percentages), temperature, and precipitation. The goal of SEABEM is to provide global farmers, mainly small-scale African farmers, the knowledge they need before practicing and benefiting from cover crops while avoiding the expensive and time-consuming operations that come …


A Global Soil Spectral Calibration Library And Estimation Service, Keith D. Sheperd, Rich Ferguson, David Hoover, Fenny Van Egmond, Jonathan Sanderman, Yufeng Ge Mar 2022

A Global Soil Spectral Calibration Library And Estimation Service, Keith D. Sheperd, Rich Ferguson, David Hoover, Fenny Van Egmond, Jonathan Sanderman, Yufeng Ge

Department of Agronomy and Horticulture: Faculty Publications

There is growing global interest in the potential for soil reflectance spectroscopy to fill an urgent need for more data on soil properties for improved decision-making on soil security at local to global scales. This is driven by the capability of soil spectroscopy to estimate a wide range of soil properties from a rapid, inexpensive, and highly reproducible measurement using only light. However, several obstacles are preventing wider adoption of soil spectroscopy. The biggest obstacles are the large variation in the soil analytical methods and operating procedures used in different laboratories, poor reproducibility of analyses within and amongst laboratories and …


Southeast Asia Must Narrow Down The Yield Gap To Continue To Be A Major Rice Bowl, Shen Yuan, Alexander M. Stuart, Alice G. Laborte, Juan I. Rattalino Edreira, Achim Dobermann, Le Vu Ngoc Kien, Lưu Thị Thúy, Kritkamol Paothong, Prachya Traesang, Khin Myo Tint, Su Su San, Marcelino Q. Villafuerte Ii, Emma D. Quicho, Anny Ruth P. Pame, Rathmuny Then, Rica Joy Flor, Neak Thon, Fahmuddin Agus, Nurwulan Agustiani, Nanyan Deng, Tao Li, Patricio Grassini Mar 2022

Southeast Asia Must Narrow Down The Yield Gap To Continue To Be A Major Rice Bowl, Shen Yuan, Alexander M. Stuart, Alice G. Laborte, Juan I. Rattalino Edreira, Achim Dobermann, Le Vu Ngoc Kien, Lưu Thị Thúy, Kritkamol Paothong, Prachya Traesang, Khin Myo Tint, Su Su San, Marcelino Q. Villafuerte Ii, Emma D. Quicho, Anny Ruth P. Pame, Rathmuny Then, Rica Joy Flor, Neak Thon, Fahmuddin Agus, Nurwulan Agustiani, Nanyan Deng, Tao Li, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Southeast Asia is a major rice-producing region with a high level of internal consumption and accounting for 40% of global rice exports. Limited land resources, climate change and yield stagnation during recent years have once again raised concerns about the capacity of the region to remain as a large net exporter. Here we use a modelling approach to map rice yield gaps and assess production potential and net exports by 2040. We find that the average yield gap represents 48% of the yield potential estimate for the region, but there are substantial differences among countries. Exploitable yield gaps are relatively …


Editorial: Genomics-Enabled Triticeae Improvement, Xue-Feng Ma, Xianchun Xia, Shuyu Liu, P. Stephen Baenziger, Hakan Özkan Mar 2022

Editorial: Genomics-Enabled Triticeae Improvement, Xue-Feng Ma, Xianchun Xia, Shuyu Liu, P. Stephen Baenziger, Hakan Özkan

Department of Agronomy and Horticulture: Faculty Publications

No abstract provided.