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Full-Text Articles in Computational Neuroscience

Tools And Approaches For The Construction Of Knowledge Models From The Neuroscientific Literature, Gully Burns, Arshad Khan, Shahram Ghandeharizadeh, Mark O'Neill, Yi-Shin Chen Jan 2003

Tools And Approaches For The Construction Of Knowledge Models From The Neuroscientific Literature, Gully Burns, Arshad Khan, Shahram Ghandeharizadeh, Mark O'Neill, Yi-Shin Chen

Selected Works Temporary Series

Within this paper, we describe a neuroinformatics project (called "NeuroScholar," http://www.neuroscholar.org/) that enables researchers to examine, manage, manipulate, and use the information contained within the published neuroscientific literature. The project is built within a multi-level, multi-component framework constructed with the use of software engineering methods that themselves provide code-building functionality for neuroinformaticians. We describe the different software layers of the system. First, we present a hypothetical usage scenario illustrating how NeuroScholar permits users to address large-scale questions in a way that would otherwise be impossible. We do this by applying NeuroScholar to a "real-world" neuroscience question: How is stress-related information …


Tools And Approaches For The Construction Of Knowledge Models From The Neuroscientific Literature, Burns, Arshad Khan, Shahram Ghandeharizadeh, Mark O'Neill, Yi-Shin Chen Jan 2003

Tools And Approaches For The Construction Of Knowledge Models From The Neuroscientific Literature, Burns, Arshad Khan, Shahram Ghandeharizadeh, Mark O'Neill, Yi-Shin Chen

Departmental Papers (Biology)

Within this paper, we describe a neuroinformatics project (called "NeuroScholar," http://www.neuroscholar.org/) that enables researchers to examine, manage, manipulate, and use the information contained within the published neuroscientific literature. The project is built within a multi-level, multi-component framework constructed with the use of software engineering methods that themselves provide code-building functionality for neuroinformaticians. We describe the different software layers of the system. First, we present a hypothetical usage scenario illustrating how NeuroScholar permits users to address large-scale questions in a way that would otherwise be impossible. We do this by applying NeuroScholar to a "real-world" neuroscience question: How is stress-related information …