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Full-Text Articles in Computational Neuroscience

Sliding Window Method For Simulating Action Potentials In Axons, Hayden Reed May 2025

Sliding Window Method For Simulating Action Potentials In Axons, Hayden Reed

Honors Theses

ABSTRACT Hodgkin and Huxley’s nonlinear partial differential equations model the excitation and propagation of action potentials in neurons, and there have been numerous attempts at finding the best numerical solution method. This thesis proposes a novel approach to solving these equations: the Sliding Window method, in which a fixed sub-interval is found through capturing the signal’s head and tail. The system is then solved on the sub-interval instead of the entire interval. Using the Sliding Window technique also involves implementing the backward and forward Euler methods and the finite difference method. It will be demonstrated that, in utilizing the Sliding …


Solving The Cable Equation, A Second-Order Time Dependent Pde For Non-Ideal Cables With Action Potentials In The Mammalian Brain Using Kss Methods, Nirmohi Charbe Jun 2023

Solving The Cable Equation, A Second-Order Time Dependent Pde For Non-Ideal Cables With Action Potentials In The Mammalian Brain Using Kss Methods, Nirmohi Charbe

Master's Theses

In this thesis we shall perform the comparisons of a Krylov Subspace Spectral method with Forward Euler, Backward Euler and Crank-Nicolson to solve the Cable Equation. The Cable Equation measures action potentials in axons in a mammalian brain treated as an ideal cable in the first part of the study. We shall subject this problem to the further assumption of a non-ideal cable. Assume a non-uniform cross section area along the longitudinal axis. At the present time, the effects of torsion, curvature and material capacitance are ignored. There is particular interest to generalize the application of the PDEs including and …