Environmental Microbiology and Microbial Ecology Commons^™

Biodiversity And Antimicrobial Activity Of Cold-Adapted Soil Microfungi From: Deception Island, Wilhelmina Bay And Yankee Bay, Maritime Antarctica., Mohammed Ahmed Mohammed Abneuf

Student Works (2010-2019)

Decades ago, the Antarctic regions have been exploited for cold-tolerant microorganisms, prospecting various biological benefits, mainly psychrophilic enzymes and bioactive compounds. The first half of the present research aimed to study the occurrence of microfungi in samples of soil taken from Deception Island, Wilhelmina Bay and Yankee Bay, Maritime Antarctica. Attempt made to screen the biodiversity using conventional media and soil plating technique, yielded population of 27 species from the total of 14 soil samples. Of that, 13 fungal species were recorded from Deception Island, 8 from Wilhelmina Bay and 6 from Yankee Bay. Among the genera were Aspergillus, …

Baseline Microbial Characterizations Of An Imperiled Aquatic Diversity Hotspot: Ash Meadows National Wildlife Refuge, Jessica Newburn, Jim Bruckner, Jenny C. Fisher, Duane P. Moser

Undergraduate Research Opportunities Program (UROP)

Located in the discharge zone of the Death Valley Flow System, Ash Meadows National Wildlife Refuge is a spring-fed desert oasis and biodiversity hotspot about 90 miles northwest of Las Vegas. These critical wetlands are potentially threatened by groundwater pumping, exotic species invasions, and climate change. Although a major component of the lower food web, very little is known about the microbial makeup of this ecosystem. As a first step towards understanding the microbial and biogeochemical aspects of this system, a detailed molecular-based characterization of microbial communities, baseline chemistry, and physical characteristics of various springs of Ash Meadows will be …

Identification Of Arid Soil Inducible Genes In Pseudomonas Fluorescens Strain Pf0-1, Katila Pipitone

UNLV Theses, Dissertations, Professional Papers, and Capstones

This thesis contains three major sections: introduction, literature review and the project entitled: 'Identification of Arid Soil Inducible Genes in Pseudomonas fluorescens Strain Pf0-1'. The introduction section describes a general background, the current and potential applications of P. fluorescens and the main goal of this dissertation. The literature review chapter discusses two main areas. The first area offers insights about different types of in vivo expression technology (IVET) as a tool in gene identification. This section also describes the limitations of IVET, as well as the benefits over other methods for gene identification. The second part of the literature review …

Letter From The Dean, Lalit Verma

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

New And Interesting Laboulbeniales From Brazil, Walter Rossi, Ernesto Bergonzo

Aliso: A Journal of Systematic and Floristic Botany

Two new species of Laboulbeniales are described: Laboulbenia parasyphraeae, parasitic on Parasyphraea sp. (Coleoptera, Chrysomelidae, Alticinae), and L. skelleyi, parasitic on Pselaphacus rubricatus and P. signatus (Coleoptera, Erotylidae). Other recorded species are Chaetomyces pinophili, Chitonomyces aurantiacus, Corethromyces ophitis, Dimorphomyces platensis, Dioicomyces anthici, D. cf. notoxi, Hesperomyces coccinelloides, Hydrophilomyces rhynchophorus, Laboulbenia arnaudii, L. funeralis, L. pachystoma, and L. systenae. Six ‘‘morphospecies’’ of Chitonomyces (C. appendiculatus, C. hyalinus, C. prolongatus, C. simplex, C. uncinatus, and C. cf. zonatus) parasitic on …

Microbial Ecology Of Keane Wonder Spring, Death Valley National Park, Alexander B. Michaud, Duane P. Moser

Undergraduate Research Opportunities Program (UROP)

This research is focused on developing a better understanding of he physiological and phylogenetic diversity as well as environmental abundance of bacteria of the genus: Shewanella in selected desert ecosystems. Prior research from this laboratory has revealed that these bacteria are very abundant in sulfurand organic-rich aquatics habitats. We have selected a number of habitats for detailed investigation (cultivation, molecular ecology and relevant environmental chemistry) including the Tropicana Wash, spring in Death Valley, the lower Virgin River and possibly Big Soda Lame, Nevada.

Bacteriophage Migration Via Nematode Vectors: Host-Parasite-Consumer Interactions In Laboratory Microcosms, John J. Dennehy, Nicholas A. Friedenberg, Yul W. Yang, Paul E. Turner

Dartmouth Scholarship

Pathogens vectored by nematodes pose serious agricultural, economic, and health threats; however, little is known of the ecological and evolutionary aspects of pathogen transmission by nematodes. Here we describe a novel model system with two trophic levels, bacteriophages and nematodes, each of which competes for bacteria. We demonstrate for the first time that nematodes are capable of transmitting phages between spatially distinct patches of bacteria. This model system has considerable advantages, including the ease of maintenance and manipulation at the laboratory bench, the ability to observe many generations in short periods, and the capacity to freeze evolved strains for later …

Prevalence And Serovars Of Salmonella In The Feces Of Free-Ranging White-Tailed Deer (Odocoileus Virginianus) In Nebraska, David G. Renter, David P. Gnad, Jan M. Sargeant, Scott E. Hygnstrom

School of Natural Resources: Faculty Publications

To determine the prevalence and serovars of Salmonella in free-ranging deer, we cultured feces from white-tailed deer (Odocoileus virginianus) harvested by hunters during a regular firearm season in southeastern Nebraska (USA). We recovered Salmonella from 5 (1%; 95% confidence interval: 0.37– 2.20%) of 500 samples and identified four different Salmonella enterica serovars [Litchfield (1), Dessau (1), Infantis (2), and Enteritidis (1)]. Although the prevalence of Salmonella in free-ranging deer appears to be low, the serovars recovered are known to be pathogenic to humans and animals.

Ua3/9/5 Conservation Reserve Enhancement Program (Crep), Wku President's Office

WKU Administration Documents

Talking points used by WKU president Gary Ransdell regarding WKU's partnering with Conservation Reserve Enhancement Program.

Microbial Endemism And Biogeography, Brian P. Hedlund, James T. Staley

Life Sciences Faculty Research

The topic of microbial biogeography is almost 100 years old, however, when confronted with questions about the existence and extent of endemism in the microbial world, many microbiologists respond with opinions and theoretical arguments rather than examples of well-conducted studies. We begin this chapter with an overview of this debate as it applies to free-living prokayotes in part because there are relatively few good microbial biogeography studies. Furthermore, the arguments help to frame microbial biogeography in the larger context of biodiversity in that if endemism is common, then many more species exist.

The Diversity And Abundance Of Parasites In Age Groups Of Yellow Perch In Lake Bemidji, Mn Applied To A Whittaker Curve, Kelly J. Main

Honors Capstones

Capstone submitted as a graduation requirement for the BSU Honors Program.

A Common Pattern Of Somite Cell Rotation In Three Species Of Pipidae, Shou-Yuan Fan, Rafael O. De Sá, Gary P. Radice

Biology Faculty Publications

During amphibian somitogenesis, presumptive myotome cells change shape from round or polygonal to elongated and aligned parallel to the notochord (for reviews see Radice, et al., 1989; Keller, 2000). Although the final orientation of myotomal cells is always axial, the movements that achieve this final arrangement can differ greatly between species. The simplest movement is that seen in Bombina variegata, Pelobates fuscus, and Bufo bufo (Brustis et al., 1976; Brustis, 1979; Kielbowna, 1981 ). In these anurans, after segmentation myotomal cells simply elongate along the embryo’s anteroposterior axis. The urodeles Ambystoma mexicanum and Pleurodeles waltl have a very different pattern; …

Escherichia Coli O157:H7 In Free-Ranging Deer In Nebraska, David G. Renter, Jan M. Sargeant, Scott E. Hygnstrom, Jeff D. Hoffmann, Jerry R. Gillespie

School of Natural Resources: Faculty Publications

In order to determine the prevalence and distribution of the human pathogen, Escherichia coli O157:H7, in free-ranging deer, hunters were asked to collect and submit fecal samples from deer harvested during a regular firearm season (14–22 November 1998). Prior to the season, 47% of the hunters with permits in the southeastern Nebraska (USA) study area indicated a willingness to participate in the study. Approximately 25% of successful hunters in the area submitted deer fecal samples. Escherichia coli O157:H7 was cultured from four (0.25%) of 1,608 total samples submitted. All of the fecal samples that were properly identified (1,426) and all …

Comparison Between Two Analytical Methods For Fecal Coliform Analysis In Natural Water: Membrane Filtration And Multiple Tube Fermentation, Mona M. Hafez

Theses & Honors Papers

This study compares two different analytical methods for the determination of coliform bacteria within natural waters. The two methods are: 1) membrane Filtration, and 2) multiple tube fermentation. Water samples from ten different locations within the Appomattox River watershed were collected by technicians from the Piedmont Soil and Water Conservation District and the Piedmont Region TMDL Initiative in Farmville, Virginia.

The Membrane filtration (MF) method utilizes m-FC broth to isolate and differentiate total fecal coliform bacteria (E.coli, Klebsiella, Pseudomonas) in natural water samples. A 1% dilution of each water sample is filtered through a 0.45 micron (um) Millipore filter …

Bioaccumulation And Toxicity Studies Of Heavy Metals In Ankistrodesmus Convolutus Corda, Samina Hussin

Student Works (2000-2009)

Nine freshwater microalgal species of Malaysia, Chlorella vulgaris (isolate 001). Scenedesmus sp. (isolate 039), Moug,wlia sp. (isolate 069). l llothrix sp. (isolate 071). Ch/ore/la sp. (isolate 078), Ankistrodf!snms co11vo/11tus (isolate IO I), Chlorococuum sp. (isolate 110), Synechococcus sp. (isolate 075). Euglena sp. (isolate 058), and including two species Oocystis polymorpha UTEX 1645 (isolate 169) and Ankistrodesmus arcuatus UTEX LB 1379 (isolate 170) from the UTEX Collection, Texas, were used in 96 h single heavy metal (Cd, Co, Cr. Cu, Fe, Mn and Zn) exposure static studies for preliminary toxicity test. This was done by incubating the microalgae in a range …

Development Of A Novel Method For Phenol Detection Using High Performance Thin Layer Chromatography, Danette Young Carlton

Theses & Honors Papers

The purpose of this study was to develop a more efficient method to test for phenol in both wastewater and non-wastewater. Phenol is a caustic and toxic contaminant that may be present in our water supplies. Phenol is used in various resins, pharmaceuticals, plastics and disinfectants. Environmental Protection Agency methods are available to test for phenol using gas chromatography along with mass spectrometry or flame ionization detection. Each of these methods can be a long, involved process consisting of extraction, many sample injections, and interference problems. This method developed an easier and less complicated approach of testing for phenol in …

Report Of Significant Findings--Las Vegas Bay/Boulder Basin Investigations, James F. Labounty, Michael Horn, Bureau Of Reclamation

Publications (WR)

Field sampling was carried out between 0830 and 1500 beginning at the confluence of Las Vegas Wash and the Inner Las Vegas Bay. Ten (10) locations were sampled, each in a similar manner. Locations of sampling stations are in line from the Wash-Bay confluence to a point midway between Saddle and Black Islands. In addition, sampling was done at a location midway between Sentinel Island and the base of Fortification Hill, and at the buoy line in front of Hoover Dam. Sampling stations are labeled from LV01, at Wash-Bay confluence, to LV17 at Hoover Dam. A significant data collection point …

Cascading Disturbances In Florida Bay, Usa: Cyanobacteria Blooms, Sponge Mortality, And Implications For Juvenile Spiny Lobsters Panulirus Argus, Mark J. Butler Iv, John H. Hunt, William F. Herrnkind, Michael J. Childress, Rodney Bertelsen, William Sharp, Thomas Matthews, Jennifer M. Field, Harold G. Marshall

Biological Sciences Faculty Publications

Florida Bay, the shallow lagoon separating mainland Florida and the Florida Keys, USA, is experiencing an unprecedented series of ecological disturbances. In 1991, following reports of other ecosystem perturbations, we observed widespread and persistent blooms of cyanobacteria that coincided with the decimation of sponge communities over hundreds of square kilometers. Juvenile Caribbean spiny lobsters Panulirus argus, among other animals, rely on sponges for shelter; the impact of sponge loss on the abundance of lobsters and their use of shelter, in particular, has been dramatic. The loss of sponges on 27 experimental sites in hard bottom habitat in central Florida Bay …

Characterization Of The Aquatic Environment In Lake Mead Near The Proposed Spring Canyon Pumped-Storage Project, And Assessment Of Potential Aquatic Impacts, Charles R. Liston, Stephen J. Grabowski, Bureau Of Reclamation

Publications (WR)

A pumped storage system consists of an upper reservoir and lower reservoir separated by an elevation difference. During low demand energy periods such as nights and weekends water is pumped from the lower to the upper reservoir using available energy from conventional steam electric power plants. During high energy demand periods, such as mornings and afternoons of weekdays, upper reservoir water is allowed to drop back down through the same system of water conduits and turbines, generating electricity to conveniently meet abrupt electrical energy requirements. The same water turbines thus act both as pumps and as conventional hydroelectric turbines. Because …

Can We Guarantee The Safety Of Genetically Engineered Organisms In The Environment?, Kathleen H. Keeler, Frances E. Sharples

School of Biological Sciences: Faculty Publications

Can we guarantee the safety of genetically engineered organisms in the environment? To anticipate my remarks, the answer to the title question is “No, we cannot guarantee the safety of genetically engineered organisms released into the environment.” Indeed, it is a tenet of the scientific method that nothing can be proved, only disproved. Thus, we can never show that a release will be safe. We could only show that it would be unsafe, if that were the case. However, if the question is posed differently, for example, can we safely release genetically engineered organisms into the environment?, the answer is …

Las Vegas Wash Multispectral Scanner Survey, T. H. Mace, M. V. Olsen, Environmental Protection Agency

Publications (WR)

At the request of the U.S. Bureau of Reclamation, Boulder City, Nevada, the U.S. Environmental Protection Agency's Environmental Monitoring Systems Laboratory at Las Vegas collected multispectral scanner imagery of Las Vegas Wash on October 1, 1982. A combined maximum likelihood classification and editing procedure was used to classify the multispectral scanner imagery into 12 categories of land cover. The classification identified four categories of marsh vegetation, one category of riparian, two categories of mixed scrub, and two desert categories. Turbid water and cultivated land formed an "other" category. Area tabulations were formed by georeferencing the classification to the Universal Transverse …

The Voluntary Water Quality Monitoring Program : 1982 Project Report, Barbara Welch, Judy Potvin, Mary Ellen Dennis

Maine Collection

The Voluntary Water Quality Monitoring Program : 1982 Project Report

by Barbara Welch, Judy Potvin & Mary Ellen Dennis

Division of Environmental Evaluation and Lake Studies, Maine Department of Environmental Protection, Augusta, Maine 1982.

Contents: Understanding Maine's Lakes and Ponds / Acknowledgement / Temperature / Dissolved Oxygen / Other Measures of Lake Water Quality / Nutrients / Algae and Chlorophyll a / Transparency / Morphometry / Sampling / Protection / Classification / Answers to Most Frequently Asked Questions / Glossary of Terms / Appendix A : Maximum, Minimum, and Mean Values / Appendix B : Phosphate Content of Common Cleansers …

A Limnological Study Of 43 Selected Maine Lakes, Derrill J. Cowing, Matthew Scott

Maine Collection

A Limnological Study of 43 Selected Maine Lakes

by Derrill J. Cowing and Matthew Scott

U.S. Geological Survey : Water-Resources Investigations 80-69

Prepared in cooperation with the Maine Department of Environmental Protection

U.S. Geological Survey, 26 Ganneston Drive, August, Maine 04330

A Review Of The Limnology Of And Water Quality Standards For Lake Mead, Charles R. Goldman

Publications (WR)

1. The waters of Las Vegas Bay, a heavily utilized recreational resource, receive discharges from a variety of municipal and industrial waste sources. The U.S. Environmental Protection Agency has determined, on the basis of numerous studies, that the present water quality violates state and federal standards and constitutes a public nuisance. Consultants have advised the Sewage and Wastewater Advisory Committee that rapid abatement of the alleged pollution conditions can be achieved by an advanced wastewater treatment (AWT) plant.

2. The major problems in Las Vegas Bay are an objectionable water color, excessive turbidity, noxious odors, and oxygen depletion in certain …

Phomopsis : The Causal Fungus Of Lupinosis, P Mcr Wood, A. G. P. Brown

Journal of the Department of Agriculture, Western Australia, Series 4

It is now well known that lupinosis of sheep and cattle follows ingestion of lupin stubble colonised by the fungus Phomopsis rossiana. The fungus infects green lupins but persists on the stubble and under certain conditions apparently produces a toxin which causes the disease.

As Phomopsis is now widespread on lupins in Western Australia its ecology has been studied in detail as a basis for possible control measures.

This article outlines what is known so far of the disease and its control.

A Diurnal Zooplankton Migration Study In Lake Mead, Robert D. Staker

Publications (WR)

The diurnal vertical movement of zooplankton was first recorded in freshwater lakes by Weismann (1877) in Lake Constance (Bodensee), although Cuvier was credited with observing the migration of Daphniae in 1817 (Gushing, 1955). The migration is best observed in deep oligotrophic lakes and migrations of 50 m per day are described (Worthington, 1931). In addition, two species of chaetognaths are reported to migrate 400 m a day in marine waters off of Lisbon (Waterman and Berry, 1967) while Birge (1895) found little evidence of the phenomenon at all in Lake Mendota, Wisconsin. Most zooplankton that migrate rise at night and …

Phytoplankton Distribution And Water Quality Indices For Lake Mead (Colorado River), Robert D. Staker, Robert W. Hoshaw, Lorne G. Everett

Publications (WR)

Phytoplankton samples were collected in Lake Mend 6 times from September 1910 to June 1971 for 8 stations at depths of 0. 3, 5, 10, 20, and 30 m. These samples were processed through a Millipore filter apparatus and 79 planktonic algae were identified. Algal divisions represented were Bacillariophyta, 42 species; Chlorophyta, 18 ; Cyanophyta, 9; Chrysophyta, 3; Cryptophyta, 3; Pyrrophyta, 2; and Euglenophyta, 2. Blue-green algae were dominant in late summer and fall; green algae, diatoms, and, cryptomonads in winter; and green algae in spring. The early summer flora was best represented by the Chlorophyta, Cryptophyta, and Chrysophyta. Palmer's …

A Limnological Study Of Shadow Lake, A Subalpine Lake At Mount Rainer National Park, Washington, Timothy J. Hall

All Master's Theses

This paper presents a general limnological survey of a subalpine lake ecosystem. Physical, chemical and biological parameters were considered. Chemical and physical factors were dominated by the influence of snow-ice cover and high amounts of solar radiation. Abiotic factors result in a small phytoplankton standing crop and limitation of activity by photosynthetic organisms to the short summer season. Zooplankton and benthic communities are simplified in species composition and population size in response to the small primary producer population.

Phytoplankton Successions And Lake Dynamics In Las Vegas Bay, Lake Mead, Nevada, Ervon R. Koening, Richard W. Tew, James E. Deacon

Publications (WR)

Phytoplankton successions, applications of the general growth equation, and physical measurements have been employed to investigate events occurring at the interface between industrial and sewage effluent contained in Las Vegas Wash and the waters of Lake Mead, Nevada. The data indicate that the entering waters tend to form a density current interrupted at intervals by dynamic effects generated in the lake. The dynamic relationships described here for the spring months suggest that a much more thorough understanding of physical, chemical and biological interactions is necessary to permit solution of the numerous problems of Las Vegas Bay discussed or alluded to …

A Mathmatical Model Of Primary Productivity And Limnological Patterns In Lake Mead, Lorne G. Everett

Publications (WR)

The temporal and spatial changes in chemical and biological properties of Lake Mead have been investigated, thereby indicating the sources of water pollution and the time of highest pollution potential. Planktonic organisms have been shown to indicate the presence of water problems. Macro- and micro-nutrient analyses have shown that primary productivity is not inhibited by limiting concentrations. A mathematical model has been developed, tested with one set of independent data, and shown worthy of management utility. Although the model works very well for the Lake Mead area, the physical reality of the Multiple Linear Regression equation should be tested on …