Marine Biology Commons^™

Experimental Assessment Of Lionfish Removals To Mitigate Reef Fish Community Shifts On Northern Gulf Of Mexico Artificial Reefs, Kristin A. Dahl, William F. Patterson Iii, Richard A. Synder

C-IMAGE Publications

Substantial declines in reef fishes were observed at northern Gulf of Mexico artificial reef sites between 2009−2010 and 2011−2012, a period that bracketed the appearance of invasive lionfish in this ecosystem. Small demersal reef fishes, the predominant prey of lionfish in other systems, displayed the greatest declines. However, a confounding factor during this time was the Deepwater Horizon Oil Spill (DWH) in summer 2010. In some areas, targeted lionfish removals have been demonstrated to mitigate negative effects on native fishes. Therefore, we conducted a 2 yr experiment to examine the effectiveness and ecological benefits of targeted lionfish removals at artificial …

Condition Of Larval Red Snapper (Lutjanus Campechanus) Relative To Environmental Variability And The Deepwater Horizon Oil Spill, Frank J. Hernandez Jr., J.E. Filbrun, J. Fang, John Timothy Ransom

Faculty Publications

The Deepwater Horizon oil spill(DWHOS)spatially and temporally overlapped with the spawning of many fish species, including Red Snapper, one of the most economically important reef fish in the Gulf of Mexico. To investigate potential impacts of the DWHOS on larval Red Snapper, data from a long-term ichthyoplankton survey off the coast of Alabama were used to examine: (1)larval abundances among pre-impact (2007–2009), impact(2010), and post-impact (2011, 2013) periods; (2) proxies for larval condition (size-adjusted morphometric relationships and dry weight) among the same periods; and (3) the effects of background environmental variation on larval condition. We found that larval Red Snapper …

Employing Extant Stable Carbon Isotope Data In Gulf Of Mexico Sedimentary Organic Matter For Oil Spill Studies, Brad E. Rosenheim, Matthew A. Pendergraft, George C. Flowers, Robert Carney, José L. Sericano, Jeff Chanton, Zeynep Dincer, Terry L. Wade

Marine Science Faculty Publications

We have compiled and mapped available carbon isotope data from sedimentary organic material sampled from the Gulf of Mexico prior to 2010. These data provide a baseline to which any changes in the Gulf of Mexico after the 2010 Deepwater Horizon oil spill can be compared. The mean (±1σ) δ¹³C values, relative to PDB, are −21.4±1.9‰ (entire Gulf of Mexico), −21.7±1.2‰ (shelf sediments), −20.4±1.6‰ (deepwater sediments), and −25.2±4.1‰ (seep-affected sediments). We compare pre-spill mean δ¹³C values to carbon isotope measurements of sedimentary organic material from coretop samples collected after the 2010 Deepwater Horizon oil …

Changes In Sediment Redox Conditions Following The Bp Dwh Blowout Event, D. W. Hastings, Patrick Schwing, G. R. Brooks, R. A. Larson, J. L. Morford, T. Roeder, K. A. Quinn, T. Bartlett, Isabel C. Romero, David Hollander

Marine Science Faculty Publications

Following the blowout of the Macondo well, a pulse in sedimentation resulted in changes in sedimentary redox conditions. This is demonstrated by downcore and temporal changes in the concentration of redox sensitive metals: Mn, Re, and Cd. Sediment cores collected in the NE Gulf of Mexico (GoM) reveal increased sedimentation after the Deepwater Horizon (DWH) blowout. The formation of mucous-rich marine snow in surface waters and subsequent rapid deposition to underlying sediments is the likely cause. Respiration of this material resulted in decreased pore-water oxygen concentration and a shoaled redoxcline, resulting in two distinct Mn peaks in sediments following …

Hotspots, Extinction Risk And Conservation Priorities Of Greater Caribbean And Gulf Of Mexico Marine Bony Shorefishes, Christi Linardich

Biological Sciences Theses & Dissertations

Understanding the status of species is important for allocation of resources to redress biodiversity loss. Regional organizations tasked with managing threats to the 1,360 marine bony shorefishes of the Caribbean and Gulf of Mexico would benefit from a delineation of conservation priorities. However, prior to this study, conservation status was known for only one quarter of these shorefishes. Extinction risk assessment under IUCN Red List Criteria is a widely-used, objective method to communicate species-specific conservation needs. Data were collated on each species’ distribution, population, habitats and threats and experts at three Red List workshops assigned a global level extinction risk …

Associations Of Metal Exposure In Otoliths With Lesion Formation In Offshore, Northeastern Gulf Of Mexico Fishes Collected After The Deepwater Horizon Oil Spill (2011-2013), Ernst B. Peebles

C-IMAGE data

This dataset contains annual metal concentrations for the years 2009-2011 within the otoliths of six, offshore Gulf of Mexico fishes: Red Grouper, Epinephelus morio; Red Porgy, Pagrus pagrus; Red Snapper, Lutjanus campechanus; Southern Hake, Urophycis floridana; Tilefish, Lopholatilus chamaeleonticeps; and Yellowedge Grouper, Hyporthodus flavolimbatus. Fish were collected from the northeastern Gulf of Mexico, from approximately the Louisiana Shelf to the West Florida Shelf. For each sample, a suite of 9 isotopes was measured within fish otoliths: 24Mg, 51V, 53Cr, 57Fe, 59Co, 60Ni, 63Cu, 64Zn, and 208Pb. Annual metal concentrations were determined by averaging metal concentrations corresponding to the annual increment …

Local Versus Generalized Phenotypes In Two Sympatric Aurelia Species: Understanding Jellyfish Ecology Using Genetics And Morphometrics, Luciano M. Chiaverano, Keith Bayha, William M. Graham

Faculty Publications

For individuals living in environmentally heterogeneous environments, a key component for adaptation and persistence is the extent of phenotypic differentiation in response to local environmental conditions. In order to determine the extent of environmentally induced morphological variation in a natural population distributed along environmental gradients, it is necessary to account for potential genetic differences contributing to morphological differentiation. In this study, we set out to quantify geographic morphological variation in the moon jellyfish Aurelia exposed at the extremes of a latitudinal environmental gradient in the Gulf of Mexico (GoM). We used morphological data based on 28 characters, and genetic data …

Age, Growth, Reproduction, And Diet Of The Finetooth Shark, Carcharhinus Isodon, In The Northern Gulf Of Mexico, Jeremy Michael Higgs

Master's Theses

The current study examined life history parameters of the finetooth shark, Carcharhinus isodon, in the northern Gulf of Mexico (nGOM) to provide an accurate description of the species’ reproductive biology, age, growth and diet composition. A total of 1,489 finetooth sharks (830 female; 659 male) were collected from coastal waters of the nGOM between Apalachicola Bay, Florida (29.873° N and 84.514° W) and East Bay, Louisiana (28.959° N and 89.279° W) from June 2006 through October 2013. Peak reproductive development occurred during May/June for both males and females, which was followed by mating and an 11-12 month gestation period. …

Tidal Hydrodynamics Under Future Sea Level Rise And Coastal Morphology In The Northern Gulf Of Mexico, Davina L. Passeri, Scott C. Hagen, Nathaniel G. Plant, Matthew V. Bilskie, Stephen C. Medeiros, Karim Alizad

Faculty Publications

This study examines the integrated influence of sea level rise (SLR) and future morphology on tidal hydrodynamics along the Northern Gulf of Mexico (NGOM) coast including seven embayments and three ecologically and economically significant estuaries. A large-domain hydrodynamic model was used to simulate astronomic tides for present and future conditions (circa 2050 and 2100). Future conditions were simulated by imposing four SLR scenarios to alter hydrodynamic boundary conditions and updating shoreline position and dune heights using a probabilistic model that is coupled to SLR. Under the highest SLR scenario, tidal amplitudes within the bays increased as much as 67% (10.0 …

Assessing The Impacts Of Oil-Associated Marine Snow Formation And Sedimentation During And After The Deepwater Horizon Oil Spill, Kendra L. Daly, Uta Passow, Jeffrey Chanton, David Hollander

Marine Science Faculty Publications

The Deepwater Horizon oil spill was the largest in US history, unprecedented for the depth and volume of oil released, the amount of dispersants applied, and the unexpected, protracted sedimentation of oil-associated marine snow (MOS) to the seafloor. Marine snow formation, incorporation of oil, and subsequent gravitational settling to the seafloor (i.e., MOSSFA: Marine Oil Snow Sedimentation and Flocculent Accumulation) was a significant pathway for the distribution and fate of oil, accounting for as much as 14% of the total oil released. Long residence times of oil on the seafloor will result in prolonged exposure by benthic organisms and economically …

Quantification Of Boat Visitation Rates At Artificial And Natural Reefs In The Eastern Gulf Of Mexico Using Acoustic Recorders, Peter Simard, Kara R. Wall, David A. Mann, Carrie C. Wall, Christopher D. Stallings

Marine Science Faculty Publications

Artificial reefs are commonly used as a management tool, in part to provide ecosystem services, including opportunities for recreational fishing and diving. Quantifying the use of artificial reefs by recreational boaters is essential for determining their value as ecosystem services. In this study, four artificial–natural reef pairs in the eastern Gulf of Mexico (off western Florida) were investigated for boat visitation rates using autonomous acoustic recorders. Digital SpectroGram (DSG) recorders were used to collect sound files from April 2013 to March 2015. An automatic detection algorithm was used to identify boat noise in individual files using the harmonic peaks generated …

Macrobenthic Communities In The Northern Gulf Of Mexico Hypoxic Zone: Testing The Pearson-Rosenberg Model, Shivakumar Shivarudrappa

Dissertations

The Pearson and Rosenberg (P-R) conceptual model of macrobenthic succession was used to assess the impact of hypoxia (dissolved oxygen [DO] ≤ 2 mg/L) on the macrobenthic community on the continental shelf of northern Gulf of Mexico for the first time. The model uses a stress-response relationship between environmental parameters and the macrobenthic community to determine the ecological condition of the benthic habitat. The ecological significance of dissolved oxygen in a benthic habitat is well understood. In addition, the annual recurrence of bottom-water hypoxia on the Louisiana/Texas shelf during summer months is well documented.

The P-R model illustrates the decreasing …

Passive Acoustic Monitoring Of Beaked Whale Densities In The Gulf Of Mexico, John A. Hildebrand, Simone Baumann-Pickering, Kaitlin E. Frasier, Jennifer S. Trickey, Karlina P. Merkens, Sean M. Wiggins, Mark A. Mcdonald, Lance P. Garrison, Danielle Harris, Tiago A. Marques, Len Thomas

C-IMAGE Publications

Beaked whales are deep diving elusive animals, difficult to census with conventional visual surveys. Methods are presented for the density estimation of beaked whales, using passive acoustic monitoring data collected at sites in the Gulf of Mexico (GOM) from the period during and following the Deepwater Horizon oil spill (2010-2013). Beaked whale species detected include: Gervais' (Mesoplodon europaeus), Cuvier's (Ziphius cavirostris), Blainville's (Mesoplodon densirostris) and an unknown species of Mesoplodon sp. (designated as Beaked Whale Gulf - BWG). For Gervais' and Cuvier's beaked whales, we estimated weekly animal density using two methods, one based on the number of echolocation clicks, …

Sedimentation Pulse In The Ne Gulf Of Mexico Following The 2010 Dwh Blowout, Gregg R. Brooks, Rebekka A. Larson, Patrick Schwing, Isabel C. Romero, Christopher Moore, Gert-Jan Reichart, Tom Jilbert, Jeff P. Chanton, David W. Hastings, Will A. Overholt, Kala P. Marks, Joel E. Kostka, Charles W. Holmes, David Hollander

Marine Science Faculty Publications

The objective of this study was to investigate the impacts of the Deepwater Horizon (DWH) oil discharge at the seafloor as recorded in bottom sediments of the DeSoto Canyon region in the northeastern Gulf of Mexico. Through a close coupling of sedimentological, geochemical, and biological approaches, multiple independent lines of evidence from 11 sites sampled in November/December 2010 revealed that the upper ~1 cm depth interval is distinct from underlying sediments and results indicate that particles originated at the sea surface. Consistent dissimilarities in grain size over the surficial ~1 cm of sediments correspond to excess ²³⁴Th depths, which …

Hydrocarbons In Deep-Sea Sediments Following The 2010 Deepwater Horizon Blowout In The Northeast Gulf Of Mexico, Isabel C. Romero, Patrick Schwing, Gregg R Brooks, Rebekka A Larson, David W. Hastings, Greg Ellis, Ethan Goddard, David Hollander

Marine Science Faculty Publications

The Deepwater Horizon (DWH) spill released 4.9 million barrels of oil into the Gulf of Mexico (GoM) over 87 days. Sediment and water sampling efforts were concentrated SW of the DWH and in coastal areas. Here we present geochemistry data from sediment cores collected in the aftermath of the DWH event from 1000-1500 m water depth in the DeSoto Canyon, NE of the DWH wellhead. Cores were analyzed at high-resolution (at 2 mm and 5 mm intervals) in order to evaluate the concentration, composition and input of hydrocarbons to the seafloor. Specifically, we analyzed total organic carbon (TOC), aliphatic, polycyclic …

Surface And Subsurface Application Of Chemical Dispersants And Associated Ecosystem Impacts, Adam V. Radpour

Master's Projects and Capstones

Chemical dispersants are applied to spilled oil in marine environments when other, less controversial, methods are not adequate for the incident. They are considered to be a response method as opposed to a direct cleanup method, with the intended goals of reducing risk of exposure to sensitive shorelines, reducing environmental injury to surface-dwelling sea birds and marine mammals, and facilitating the biodegradation of spilled oil into the water column.

For this research, both surface and subsurface application of dispersants were evaluated in terms of oil characteristics and volume, and oceanic and atmospheric conditions. More data exists to support the effectiveness …

Spatial, Temporal And Demographical Analysis Of Gulf Of Mexico Research Priorities, The Effect Of The Deepwater Horizon Oil Spill, Stephen Hiller Sempier

Dissertations

A set of twenty equally-weighted national ocean research priorities were define in 2007, but it was not clear if these priorities applied for the Gulf of Mexico. A series of three longitudinal surveys of people who conduct research, sponsor research or use research for professional or recreational purposes was released that focused on the twenty research priorities and asked people how they rated each. A convenience sampling method was employed, which suggests that the results are constrained to the survey respondents and should not be extrapolated to a larger population. More than 1,500 people completed the 2013 GMRP survey and …

A Decline In Benthic Foraminifera Following The Deepwater Horizon Event In The Northeastern Gulf Of Mexico, Patrick Schwing, Isabel C. Romero, Gregg R Brooks, David W Hastings, Rebekka A Larson, David Hollander

Marine Science Faculty Publications

Sediment cores were collected from three sites (1000-1200 m water depth) in the northeastern Gulf of Mexico from December 2010 to June 2011 to assess changes in benthic foraminiferal density related to the Deepwater Horizon (DWH) event (April-July 2010, 1500 m water depth). Short-lived radioisotope geochronologies (²¹⁰Pb, ²³⁴Th), organic geochemical assessments, and redox metal concentrations were determined to relate changes in sediment accumulation rate, contamination, and redox conditions with benthic foraminiferal density. Cores collected in December 2010 indicated a decline in density (80-93%). This decline was characterized by a decrease in benthic foraminiferal density and benthic foraminiferal accumulation rate (BFAR) …

Regional Patterns In The Otolith Chemistry Of Juvenile Spotted Seatrout (Cynoscion Nebulosus) Differ Under Contrasting Hydrological Regimes, Chet F. Rakocinski, Bruce H. Comyns, Mark S. Peterson, Alan M. Shiller

Faculty Publications

The value of using otolith chemistry to characterize recruitment in terms of natal source regions depends on how consistently spatio-temporal variation can be resolved. The objective of this study was to compare regional classification patterns in the otolith chemistry of juvenile Spotted Seatrout (Cynoscion nebulosus) between two years experiencing disparate hydrological regimes, and separated by a five year interlude. Spatial patterns in the whole-otolith chemistry of juveniles of this estuarine-dependent species were compared between years using five otolith elements and two stable isotopes. Consistent size-related trends in uptake and deposition were evidenced by parallel ontogenetic relationships for six otolith variables. …

Ecology, Population Dynamics, And Sexual Characteristics Of Commensal Leucothoid Amphipods With The Sponge Cliona Varians In The Florida Keys (Crustacea: Amphipoda), Stephanie Lynn Andringa

HCNSO Student Theses and Dissertations

Recent observations have identified a new species of leucothoid amphipod, Leucothoe “sp. F,” associated with the sponge Cliona varians. This project examined the relationship between this amphipod and its sponge host at three sites in the Florida Keys with differing hydrodynamic regimes. Ninety-eight sponge samples with a total of 2,030 amphipods were collected between December 2011 and September 2012. Leucothoe “sp. F” is currently a common species in the Florida Keys strongly associated with C. varians; its distribution strongly coincides with open tidal currents from the Gulf of Mexico. Seasonality, depth, and tidal regimes not only influence population …

Fish Sound Production In The Presence Of Harmful Algal Blooms In The Eastern Gulf Of Mexico, Carrie C. Wall, Chad Lembke, Chuanmin Hu, David A. Mann

Marine Science Faculty Publications

This paper presents the first known research to examine sound production by fishes during harmful algal blooms (HABs). Most fish sound production is species-specific and repetitive, enabling passive acoustic monitoring to identify the distribution and behavior of soniferous species. Autonomous gliders that collect passive acoustic data and environmental data concurrently can be used to establish the oceanographic conditions surrounding sound-producing organisms. Three passive acoustic glider missions were conducted off west-central Florida in October 2011, and September and October 2012. The deployment period for two missions was dictated by the presence of red tide events with the glider path specifically set …

Polycyclic Aromatic Hydrocarbon Metabolites As A Biomarker Of Exposure To Oil In Demersal Fishes Following The Deepwater Horizon Blowout, Susan Susan Snyder

USF Tampa Graduate Theses and Dissertations

The Deepwater Horizon blowout occurred on April 20th, 2010, releasing 4.9 million barrels of Louisiana crude oil into the Gulf of Mexico (GoM). Subsequent to the Deepwater Horizon blowout, sediment cores revealed oil on the northern GoM seafloor and abnormal skin lesions were seen in GoM fishes. Exposure to polycyclic aromatic hydrocarbons (PAHs), a component of crude oil, in fish has been associated with many sublethal effects, including cancer and population-level effects. Using a biomarker of exposure to PAHs, this thesis evaluates inter-species, temporal and spatial differences in exposure to hydrocarbon contamination between three species of fish with varying levels …

Recruitment Patterns Of Juvenile Fish At An Artificial Reef In The Gulf Of Mexico, Rachel Noel Arney

Theses and Dissertations - UTB/UTPA

In 2011, the Texas Parks and Wildlife Department deployed 4,000 culverts as an artificial reef off Port Mansfield, TX to serve as habitat for sport fish species in the Gulf of Mexico. The aim of this study was to assess juvenile fish recruitment at particular culvert densities among the reef. Standard monitoring units for the recruitment of reef fish (SMURFs) were used in this study and acted as sampling devices. SMURFs were placed at thirteen sampling stations among four different reef patch densities and sampled repeatedly from 2013-2014. Culvert densities included stations with: zero culverts, 1-50 culverts, 51-100 culverts, and …

Taxonomy, Diversity, And Distribution Patterns Of Portunid Crab Megalopae In The Northern Gulf Of Mexico During Fall Of 2003, Carley Rain Knight

Master's Theses

The field of zooplankton biology contributes to more accurate stock assessments as well as to a greater understanding of the marine food web. However, adequate information for the invertebrate component of zooplankton is lacking compared to the ichthyoplankton component. In this thesis, identification of Portunidae (Crustacea: Decapoda) megalopae collected during the fall of 2003 from a NOAA SEAMAP cruise revealed 7 species and 11 morphs with 90% of the total density comprised of Callinectes sapidus, Achelous gibbesii, Callinectes similis, Achelous spinicarpus, and Achelous sp.I. Keys and detailed descriptions are provided along with photographs and morphological drawings for each morph to …

Habitat-Specific Density And Diet Of Rapidly Expanding Invasive Red Lionfish, Pterois Volitans,, Populations In The Northern Gulf Of Mexico, Kristen A. Dahl, William F. Patterson Iii

C-IMAGE Publications

Invasive Indo-Pacific red lionfish, Pterois volitans, were first reported in the northern Gulf of Mexico (nGOM) in summer 2010. To examine potential impacts on native reef fish communities, lionfish density and size distributions were estimated from fall 2010 to fall 2013 with a remotely operated vehicle at natural (n = 16) and artificial (n = 22) reef sites. Lionfish (n = 934) also were sampled via spearfishing to examine effects of habitat type, season, and fish size on their diet and trophic ecology. There was an exponential increase in lionfish density at both natural and artificial reefs over the study …

Reproductive Phase Determination In Male Meagre (Argyrosomus Regius, Sciaenidae): Testis Development And Histologic Corroboration Of A Gross Anatomical Scale, Nuno Prista, Leonel Gordo, Jose L. Costa, Maria J. Costa, Cynthia M. Jones

OES Faculty Publications

Reproductive stage determination of male gonads has received sparse attention in fish biology literature with few studies detailing the building of gross anatomical-and histologic scales. The meagre (Argyrosomus regius) is one of the world's largest sciaenids and supports a significant regional fishery in European and North African waters whose reproductive patterns are yet to be fully investigated. In the present study, we derive a macroscopic grading system for meagre testis using semi-quantitative graphs that feature the testis variability along the species size range and time of the year. We then describe the histological stages and reproductive phases of …

A Comparison Of Site Fidelity And Habitat Use Of Red Snapper (Lutjanus Campechanus) To Evaluate The Performance Of Two Artificial Reefs In South Texas Utilizing Acoustic Telemetry, Andres Garcia

Theses and Dissertations - UTB/UTPA

Evaluation of artificial reefs is becoming an increasingly important component of fisheries management. This is particularly true for the northwestern Gulf of Mexico where natural hard substrate is limited and 359 petroleum platforms are scheduled for removal in 2013 due to the “idle iron” policy. This study compared the performance of two artificial reef configurations off the south Texas coast, the Texas Clipper and South Padre Island Near Shore Reefs that differ in material, depth, and distance from shore, with respect to behavior of red snapper, Lutjanus campechanus, an important recreational and commercial species. Red snapper were implanted with depth …

Fish Species Distribution In Seagrass Habitats Of Chesapeake Bay Are Structured By Abiotic And Biotic Factors, Jason J. Schaffler, Jacques Van Montfrans, Cynthia M. Jones, Robert J. Orth

OES Faculty Publications

Seagrass habitats have long been known to serve as nursery habitats for juvenile fish by providing refuges from predation and areas of high forage abundance. However, comparatively less is known about other factors structuring fish communities that make extensive use of seagrass as nursery habitat. We examined both physical and biological factors that may structure the juvenile seagrass-associated fish communities across a synoptic-scale multiyear study in lower Chesapeake Bay. Across 3years of sampling, we collected 21,153 fish from 31 species. Silver Perch Bairdiella chrysoura made up over 86% of all individuals collected. Nine additional species made up at least 1% …

Generalized Additive Models Used To Predict Species Abundance In The Gulf Of Mexico: An Ecosystem Modeling Tool, Michael Drexler, Cameron H. Ainsworth

C-IMAGE Publications

Spatially explicit ecosystem models of all types require an initial allocation of biomass, often in areas where fisheries independent abundance estimates do not exist. A generalized additive modelling (GAM) approach is used to describe the abundance of 40 species groups (i.e. functional groups) across the Gulf of Mexico (GoM) using a large fisheries independent data set (SEAMAP) and climate scale oceanographic conditions. Predictor variables included in the model are chlorophyll a, sediment type, dissolved oxygen, temperature, and depth. Despite the presence of a large number of zeros in the data, a single GAM using a negative binomial distribution was suitable …

Phytoplankton Community Distribution And Light Absorption Properties In The Northern Gulf Of Mexico, Sumit Chakraborty

Dissertations

The theme of this dissertation was to understand the spatio-temporal dynamics of the phytoplankton community, its light absorption properties, and its relationship to underlying physicochemical processes. Understanding these phenomena will benefit efforts to predict pathways of carbon transformation in the ocean, to estimate primary productivity (PP) and to characterize distributions of phytoplankton communities using ocean color remote sensing.

This research entailed four different studies, which address different objectives. The first two studies dealt with phytoplankton community composition and its relationship to environmental variables. A chemotaxonomic approach was used, which was successful in revealing distinct phytoplankton assemblages in distinct water mass …