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2022

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Articles 271 - 300 of 387

Full-Text Articles in Marine Biology

Environment-Driven Shifts In Inter-Individual Variation And Phenotypic Integration Within Subnetworks Of The Mussel Transcriptome And Proteome, Richelle L. Tanner, Lani U. Gleason, W. Wesley Dowd Apr 2022

Environment-Driven Shifts In Inter-Individual Variation And Phenotypic Integration Within Subnetworks Of The Mussel Transcriptome And Proteome, Richelle L. Tanner, Lani U. Gleason, W. Wesley Dowd

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The environment can alter the magnitude of phenotypic variation among individuals, potentially influencing evolutionary trajectories. However, environmental influences on variation are complex and remain understudied. Populations in heterogeneous environments might exhibit more variation, the amount of variation could differ between benign and stressful conditions, and/or variation might manifest in different ways among stages of the gene-to-protein expression cascade or among physiological functions. Here, we explore these three issues by quantifying patterns of inter-individual variation in both transcript and protein expression levels among California mussels, Mytilus californianus Conrad. Mussels were exposed to five ecologically relevant treatments that varied in the mean …

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Development And Assessment Of An Environmental Dna (Edna) Assay For A Cryptic Siren (Amphibia: Sirenidae), Krista M. Ruppert, Drew R. Davis, Md Saydur Rahman, Richard J. Kline Apr 2022

Development And Assessment Of An Environmental Dna (Edna) Assay For A Cryptic Siren (Amphibia: Sirenidae), Krista M. Ruppert, Drew R. Davis, Md Saydur Rahman, Richard J. Kline

School of Earth, Environmental, & Marine Sciences Faculty Publications

Environmental DNA (eDNA) assays have become a major aspect of surveys for aquatic organisms in the past decade. These methods are highly sensitive, making them well-suited for monitoring rare and cryptic species. Current efforts to study the Rio Grande Siren in southern Texas have been hampered due to the cryptic nature of these aquatic salamanders. Arid conditions further add to the difficulty in studying this species, as many water bodies they inhabit are ephemeral, sometimes constraining sampling efforts to a short window after heavy rain. Additionally, sirens are known to cease activity and reside underground when ponds begin to dry …

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The Influence Of Particle Concentration And Bulk Characteristics On Polarized Oceanographic Lidar Measurements, Brian L. Collister, Richard C. Zimmerman, Charles I. Sukenik, William M. Balch, Victoria J. Hill Apr 2022

The Influence Of Particle Concentration And Bulk Characteristics On Polarized Oceanographic Lidar Measurements, Brian L. Collister, Richard C. Zimmerman, Charles I. Sukenik, William M. Balch, Victoria J. Hill

OES Faculty Publications

Oceanographic lidar measurements of the linear depolarization ratio, δ, contain information on the bulk characteristics of marine particles that could improve our ability to study ocean biogeochemistry. However, a scarcity of information on the polarized light-scattering properties of marine particles and the lack of a framework for separating single and multiple scattering effects on δ have hindered the development of polarization-based retrievals of bulk particle properties. To address these knowledge gaps, we made single scattering measurements of δ for several compositionally and morphologically distinct marine particle assemblages. We then used a bio-optical model to explore the influence of multiple …

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Ocean Quahog (Arctica Islandica) Population Dynamics: Sex-Based Demographics And Regional Comparisons In The Northwest Atlantic, Kathleen M. Hemeon Mar 2022

Ocean Quahog (Arctica Islandica) Population Dynamics: Sex-Based Demographics And Regional Comparisons In The Northwest Atlantic, Kathleen M. Hemeon

Dissertations

Arctica islandica (ocean quahog) is the longest-lived bivalve on Earth. Individuals on the deep continental shelf of the Mid-Atlantic (US) can survive for centuries, and when found in the colder, boreal waters of Iceland, ages over 500 years can be reached. The ocean quahog is important in the US, yet very little is known about the resiliency of the ocean quahog stock to fishing activity, and ocean quahog recruitment patterns over time. To quantify and constrain age-reader error prior to age analysis, a triple-method error protocol was developed for A. islandica that included age-reader bias, precision, and error frequency. The …

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Comparative Toxicity Of Hydrocarbons For Evaluation Of Lysmata Boggessi As An Experimental Proxy For Deep-Water Column Micronekton, Dorothy-Ellen A. Renegar, Nicholas Turner, Gopal Bera, Eileen G. Whitemiller, Bernhard Riegl, Jose Sericano, Anthony H. Knap Mar 2022

Comparative Toxicity Of Hydrocarbons For Evaluation Of Lysmata Boggessi As An Experimental Proxy For Deep-Water Column Micronekton, Dorothy-Ellen A. Renegar, Nicholas Turner, Gopal Bera, Eileen G. Whitemiller, Bernhard Riegl, Jose Sericano, Anthony H. Knap

Marine & Environmental Sciences Faculty Articles

The potential impacts of sub-surface hydrocarbon plumes to deep-water column micronekton are an important consideration in a more complete understanding of ecosystem effects resulting from deep-sea oil spills. However, evaluating toxicity in these organisms presents multiple challenges, and the use of a shallow-water proxy species allows comparison and validation of experimental results. This study thus examined the suitability of the peppermint shrimp, Lysmata boggessi, as an experimental proxy for ecologically important deep-sea zooplankton/micronekton in hydrocarbon toxicity assays. This crustacean species occurs in shallow coastal marine environments throughout the western Atlantic, Caribbean and Gulf of Mexico, is similar in …

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Comparison Of Recent Survey Techniques For Estimating Benthic Cover On Caribbean Mesophotic Reefs, Joseph R. Pawlik, Roy A. Armstrong, Stephanie Farrington, John Reed, Sara Rivero-Calle, Hanumant Singh, Brian K. Walker, Jason White Mar 2022

Comparison Of Recent Survey Techniques For Estimating Benthic Cover On Caribbean Mesophotic Reefs, Joseph R. Pawlik, Roy A. Armstrong, Stephanie Farrington, John Reed, Sara Rivero-Calle, Hanumant Singh, Brian K. Walker, Jason White

Marine & Environmental Sciences Faculty Articles

Highly divergent estimates of benthic cover of sponges have been reported for Caribbean mesophotic reefs (90-100 m) based on quadrat point-intercept data collection using 2 methods: visual surveys conducted in situ by technical divers, and analyses of photographs taken by unmanned underwater vehicles (UUVs). The second method has been criticized for potential errors from image distortion caused by variable camera angle relative to the substratum, but without a broader comparison of both methods. We find that studies that have used the UUV-based method are advantageous for a number of reasons, most importantly: (1) access to the full mesophotic zone, (2) …

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Analysis Of The Magnetic Signature Of Surface Waves Measured In A Laboratory Experiment, John Kluge, Alex Soloviev, Cayla W. Dean, Geoffrey K. Morrison, Brian K. Haus Mar 2022

Analysis Of The Magnetic Signature Of Surface Waves Measured In A Laboratory Experiment, John Kluge, Alex Soloviev, Cayla W. Dean, Geoffrey K. Morrison, Brian K. Haus

Marine & Environmental Sciences Faculty Articles

A magnetic signature is created by secondary magnetic field fluctuations caused by the phenomenon of seawater moving in Earth’s magnetic field. A laboratory experiment was conducted at the SUrge STructure Atmosphere INteraction (SUSTAIN) facility to measure the magnetic signature of surface waves using a differential method: a pair of magnetometers, separated horizontally by one-half wavelength, were placed at several locations on the outer tank walls. This technique significantly reduced the extraneous magnetic distortions that were detected simultaneously by both sensors and additionally doubled the magnetic signal of surface waves. Accelerometer measurements and local gradients were used to identify magnetic noise …

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Empirically Derived Thermal Thresholds Of Four Coral Species Along The Red Sea Using A Portable And Standardized Experimental Approach, Nicolas R. Evensen, Christian R. Voolstra, Maoz Fine, Gabriela Perna, Carol Buitrago-López, Anny Cárdenas, Guilhem Banc-Prandi, Katherine Rowe, Daniel J. Barshis Mar 2022

Empirically Derived Thermal Thresholds Of Four Coral Species Along The Red Sea Using A Portable And Standardized Experimental Approach, Nicolas R. Evensen, Christian R. Voolstra, Maoz Fine, Gabriela Perna, Carol Buitrago-López, Anny Cárdenas, Guilhem Banc-Prandi, Katherine Rowe, Daniel J. Barshis

Biological Sciences Faculty Publications

Global warming is causing an unprecedented loss of species and habitats worldwide. This is particularly apparent for tropical coral reefs, with an increasing number of reefs experiencing mass bleaching and mortality on an annual basis. As such, there is a growing need for a standardized experimental approach to rapidly assess the thermal limits of corals and predict the survival of coral species across reefs and regions. Using a portable experimental system, the Coral Bleaching Automated Stress System (CBASS), we conducted standardized 18 h acute thermal stress assays to quantitively determine the upper thermal limits of four coral species across the …

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The Risk Of Multiple Anthropogenic And Climate Change Threats Must Be Considered For Continental Scale Conservation And Management Of Seagrass Habitat, Kathryn Mcmahon, Kieryn Kilminster, Robert Canto, Chris Roelfsema, Mitchell Lyons, Gary A. Kendrick, Michelle Waycott, James Udy Mar 2022

The Risk Of Multiple Anthropogenic And Climate Change Threats Must Be Considered For Continental Scale Conservation And Management Of Seagrass Habitat, Kathryn Mcmahon, Kieryn Kilminster, Robert Canto, Chris Roelfsema, Mitchell Lyons, Gary A. Kendrick, Michelle Waycott, James Udy

Research outputs 2022 to 2026

Globally marine-terrestrial interfaces are highly impacted due to a range of human pressures. Seagrass habitats exist in the shallow marine waters of this interface, have significant values and are impacted by a range of pressures. Cumulative risk analysis is widely used to identify risk from multiple threats and assist in prioritizing management actions. This study conducted a cumulative risk analysis of seagrass habitat associated with the Australian continent to support management actions. We developed a spatially explicit risk model based on a database of threats to coastal aquatic habitat in Australia, spanning 35,000 km of coastline. Risk hotspots were identified …

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A Non-Iteration Solution For Solving The Backward-In-Time Two-Dimensional Burgers’ Equation With A Large Reynolds Number, Yen-Shen Chang, Yung-Wei Chen, Chein-Shan Liu, Jiang-Ren Chang Mar 2022

A Non-Iteration Solution For Solving The Backward-In-Time Two-Dimensional Burgers’ Equation With A Large Reynolds Number, Yen-Shen Chang, Yung-Wei Chen, Chein-Shan Liu, Jiang-Ren Chang

Journal of Marine Science and Technology–Taiwan

This article proposes a noniteration solution based on the Lie-group shooting method (LGSM) to solve the backward-in-time two-dimensional Burgers’ equation with a large Reynolds number. The backward problem is famous for seriously ill-posed cases because the solution is generally unstable and highly dependent on the input data. Small perturbations in the input data, such as random errors inherent to the measurements in the analysis, can cause large oscillations in the solution. To handle a large Reynolds number under long time spans, it is very difficult to integrate towards the time direction. To avoid time integration and numerical iteration, the noniteration …

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Polyketides And Terpenes In Marine Microalgae: Ecological Roles And Mechanisms Of Biosynthesis, Yunxuan Xie, Mohammad Elsheikh Mar 2022

Polyketides And Terpenes In Marine Microalgae: Ecological Roles And Mechanisms Of Biosynthesis, Yunxuan Xie, Mohammad Elsheikh

Journal of Marine Science and Technology–Taiwan

Marine microalgae comprise a large number of polyketides and terpenes identified to date with highly diverse molecular scaffolds and the biological activities (Kalaitzis et al., 2010). These compounds play significant roles in marine food web and nutraceutical supplementation in marine animals. Compounds of this class are often synthesized by gene clusters with dedicated domains responsible for carbon chain extension and modification. The unique molecular structure of these compounds encourages people to investigate their biosynthetic mechanisms in-depth. In this review, we summarize relevant articles to unravel the shared mechanisms of these compounds to further understand the variety of domain organizations and …

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Unbaited Light-Emitting Diode Traps Performance For Catching Orange Mud Crabs, Muhamad Naimullah, Kuo-Wei Lan, Mhd Ikhwanuddin, Adnan Amin-Safwan, Wei-Yu Lee Mar 2022

Unbaited Light-Emitting Diode Traps Performance For Catching Orange Mud Crabs, Muhamad Naimullah, Kuo-Wei Lan, Mhd Ikhwanuddin, Adnan Amin-Safwan, Wei-Yu Lee

Journal of Marine Science and Technology–Taiwan

Mud crabs (Scylla spp.) are a vital fishery resource and targeted for a valuable source of income for coastal communities throughout the Indo-Pacific region. Baited traps are a considerable expense in crustacean fishing. Hence, the present study was performed to investigate the catchability of Scylla olivacea in response to light-emitting diodes (LEDs) in captivity and field conditions. We used a new experimental setup in the captivity condition that revealed most S. olivacea were attracted to green, blue, and white LED lights and no attractive effect by red LED lights similar to the controls. Field studies have shown that the catch …

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Catch And Effort Standardization For Taiwanese Swordtip Squid Uroteuthis Edulis Fisheries In The Southern East China Sea, Ke-Yang Chang, Yu-Jie Hsu, Tzu-Yun Ching, Cheng-Hsin Liao, Chih-Shin Chen Mar 2022

Catch And Effort Standardization For Taiwanese Swordtip Squid Uroteuthis Edulis Fisheries In The Southern East China Sea, Ke-Yang Chang, Yu-Jie Hsu, Tzu-Yun Ching, Cheng-Hsin Liao, Chih-Shin Chen

Journal of Marine Science and Technology–Taiwan

The swordtip squid Uroteuthis edulis is a neritic squid species that is widely distributed within the coastal waters of subtropical and tropical Indo-western Pacific regions. This squid is a commercially important species throughout its distribution range and plays a critical role in marine ecosystems. Stock assessments of the squid in the East China Sea (ECS) are scarce, although it is crucial information for the sustainability of the squid and relevant fisheries. The squid was harvested by various fisheries in the southern ECS, which could restrict methods for catch-effort standardization. In this study, catch-effort data of Taiwanese swordtip squid fisheries in …

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Uniform Torsion Analysis Of Composite Shafts Using Point Collocation Method Based On Pascal Polynomials, Chih-Wen Chang, Jyh-Hong Wu, Ying-Ru Lin, Yu-Feng Lin, Nan-Nong Huang Mar 2022

Uniform Torsion Analysis Of Composite Shafts Using Point Collocation Method Based On Pascal Polynomials, Chih-Wen Chang, Jyh-Hong Wu, Ying-Ru Lin, Yu-Feng Lin, Nan-Nong Huang

Journal of Marine Science and Technology–Taiwan

Torsion bars are important elements in the marine structure applications. The usage of the composite torsion bars has increased recently because it takes advantage of the different material property of each constituent. The current research focuses mainly on the uniform warping analysis of composite torsion shafts by using the point collocation method (PCM). The PCM is based on Pascal's triangle polynomial expansion and coupled with subdomain technique that is indispensable for the analysis of composite bars. In addition to satisfying the field equation (Laplace equation for warping function) and traction-free boundary condition for each component, the continuity conditions in both …

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Local Reinforcement Design And Safety Factor Evaluation Of Elliptical Hatch Of Pressure Hull, Guang-Min Luo, Jun-Wei Chen Mar 2022

Local Reinforcement Design And Safety Factor Evaluation Of Elliptical Hatch Of Pressure Hull, Guang-Min Luo, Jun-Wei Chen

Journal of Marine Science and Technology–Taiwan

A pressure hull is the primary pressure-resistant structure of a submarine. To safeguard the compressive strength of such a hull, local structural reinforcement is required for various hatches on the hull. Hatches are commonly reinforced through increasing the thickness of the hull regions around them; alternatively, hatch nozzle walls are connected with stiffened frames to maintain the continuity of reinforced structures. This study focused on a pressure hull with an elliptical hatch. A PD-5500 cylindrical pressure hull was used to design a cylindrical pressure hull structure, and a model of hatch nozzle reinforcement was designed using the Boiler and Pressure …

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Effects Of Dietary Lipid, L-Carnitine And L-Lysine Supplementation On The Growth Performance And Body Composition Of Epinephelus Lanceolatus Larvae, Jen-Hong Chu, Yu-Cong Hong, Angela Chien, Shyn-Shin Sheen Mar 2022

Effects Of Dietary Lipid, L-Carnitine And L-Lysine Supplementation On The Growth Performance And Body Composition Of Epinephelus Lanceolatus Larvae, Jen-Hong Chu, Yu-Cong Hong, Angela Chien, Shyn-Shin Sheen

Journal of Marine Science and Technology–Taiwan

The effects of different combinations of dietary lipid, L-carnitine and L-lysine on the growth performance and fatty acid profiles of larval grouper Epinephalus lanceolatus were evaluated. Eight treatment diets were formulated based on a 2x2x2 factorial design, namely 5 and 14% dietary oil mixture (3:1 fish oil/soybean oil), 0 and 0.5% L-carnitine and 0 and 2.83% L-lysine. Each diet was randomly assigned to triplicate groups of ten 0.08g E. lanceolatus larvae for 42 days. The grouper larvae fed with diets containing 14% lipid had significantly higher weight gain percentages than those fed with diets containing 5% lipid. The weight gain …

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The Role Of Chemical Cues In Host Susceptibility To Fish-Parasitic Gnathiid Isopods., Clayton M. Vondriska Mar 2022

The Role Of Chemical Cues In Host Susceptibility To Fish-Parasitic Gnathiid Isopods., Clayton M. Vondriska

Student Theses and Dissertations

Parasitism is one of the most common lifestyle strategies. Ectoparasites must navigate complex environments to find their host and many rely heavily on chemical cues to do so. Gnathiid isopods are common parasites that use chemical cues to find their marine fish hosts. While gnathiids are considered host-generalists, hosts vary in their susceptibility to infestation. However, the mechanisms that mediate differential susceptibility are unknown. Here I used field and laboratory experiments to investigate if the chemo-attractiveness of hosts explains differences in susceptibility of Caribbean reef fishes to infestation by a common Caribbean gnathiid isopod, Gnathia marleyi. While G. marleyi can …

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Spatial And Temporal Patterns Of Fire On Saipan, Cnmi, Ilan E. Bubb, Zachary B. Williams Mar 2022

Spatial And Temporal Patterns Of Fire On Saipan, Cnmi, Ilan E. Bubb, Zachary B. Williams

Marine & Environmental Sciences Faculty Articles

Sediment core studies from Saipan suggest that fires did not play a prominent role in the disturbance regime of the Mariana Islands and have increased in frequency since human settlement around 4,000 years ago. On Saipan fires are understood to interrupt the pattern of succession leading to the degradation of native limestone forests, the proliferation of grasslands and the eventual creation of badlands. Little baseline data regarding the spatial and temporal patterns of fire on Saipan exist to create effective Fire Management Plans. This project uses Landsat 8 images from April 2013 to July 2020 and the Normalized Burn Ratio …

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Peak Chlorophyll A Concentrations In The Lower Mississippi River From 1997 To 2018, R. Eugene Turner, Charles S. Milan, Erick M. Swenson, James M. Lee Mar 2022

Peak Chlorophyll A Concentrations In The Lower Mississippi River From 1997 To 2018, R. Eugene Turner, Charles S. Milan, Erick M. Swenson, James M. Lee

Faculty Publications

Large and turbid rivers have varying temperatures, light conditions, nutrient availability, and nutrient ratios that may affect phytoplankton communities and occur within a changing world of point and nonpoint source nutrient loadings. We investigated how these physical and chemical factors affect Chlorophyll a (Chl a) concentrations in the Mississippi River, the largest river in North America, by sampling 878 times from February 1997 to December 2018 near its terminus at Baton Rouge, Louisiana. We hypothesized that nutrient concentrations and ratios were significant factors limiting phytoplankton biomass accumulations in this turbid river. The Chl a concentrations were in the "poor" water …

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Habitat Restoration Restores Underwater Soundscapes And Larval Recruitment, Jack Butler, Emily R. Anderson, Mark J. Butler Mar 2022

Habitat Restoration Restores Underwater Soundscapes And Larval Recruitment, Jack Butler, Emily R. Anderson, Mark J. Butler

Biological Sciences Faculty Publications

Habitat degradation alters many ecosystem processes, and the potential for the reestablishment of ecosystem function through restoration is an area of active research. Among marine systems, coastal habitats are particularly vulnerable to anthropogenic degradation and, in response, are the focus of marine ecological restoration. One of the crucial functions of structurally complex coastal habitats (e.g., saltmarshes, seagrass meadows, kelp forests, coral reefs) are as nurseries to coastal and offshore species, many of whose larvae utilize sound to locate suitable nursery habitat. However, the effect of habitat degradation and subsequent restoration on underwater soundscapes and their function as navigational cues for …

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Now You See Me: “First” Records Of The Greater Amberjack Seriola Dumerili At Rapa Nui Range Extension Or Increased Scientific Effort?, Naiti Morales, Amy Rose Coghlan, Erin E. Easton, Alan M. Friedlander, James J. Herlan, Carlos F. Gaymer Mar 2022

Now You See Me: “First” Records Of The Greater Amberjack Seriola Dumerili At Rapa Nui Range Extension Or Increased Scientific Effort?, Naiti Morales, Amy Rose Coghlan, Erin E. Easton, Alan M. Friedlander, James J. Herlan, Carlos F. Gaymer

School of Earth, Environmental, & Marine Sciences Faculty Publications

We report new records of the fisheries-harvested subtropical greater amberjack Seriola dumerili for the south-east Pacific Ocean. Previously, only one species of Seriola (the yellowtail amberjack Seriola lalandi) was scientifically recorded for Rapa Nui (also known as Easter Island) despite local fishers' asserting that three Seriola morphotypes are found in the region. Here we present the first 'scientific record' of what could be a pre-existing (albeit transient) species of the Rapa Nui ecoregion. Establishing the existing range limits of commercially and ecologically valuable species is key for observing climate-driven distribution shifts, and the inclusion of traditional ecological knowledge is likely …

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Monitoring Extinction Risk And Threats Of The World's Fishes Based On The Sampled Red List Index, Rafael Miranda, Imanol Miqueleiz, William Darwall, Catherine Sayer, Nicholas K. Dulvy, Kent E. Carpenter, Beth Polidoro, Nadia Dewhurst-Richman, Caroline Pollock, Craig Hilton-Taylor, Robin Freeman, Ben Collen, Monika Böhm Mar 2022

Monitoring Extinction Risk And Threats Of The World's Fishes Based On The Sampled Red List Index, Rafael Miranda, Imanol Miqueleiz, William Darwall, Catherine Sayer, Nicholas K. Dulvy, Kent E. Carpenter, Beth Polidoro, Nadia Dewhurst-Richman, Caroline Pollock, Craig Hilton-Taylor, Robin Freeman, Ben Collen, Monika Böhm

Biological Sciences Faculty Publications

Global biodiversitytargets require us to identify species at risk of extinction and quantify status and trends of biodiversity. The Red List Index (RLI) tracks trends in the conservation status of entire species groups over time by monitoring changes in categories assigned to species. Here, we calculate this index for the world’s fishes in 2010, using a sampled approach to the RLI based on a randomly selected sample of 1,500 species, and also present RLI splits for freshwater and marine systems separately. We further compare specific traits of a worldwide fish list to our sample to assess its representativeness. Overall, 15.1% …

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Spatial And Temporal Variation Of Selected Water Quality Parameters In The Tanzanian Side Of Lake Victoria, Richard Joseph Kimwaga Feb 2022

Spatial And Temporal Variation Of Selected Water Quality Parameters In The Tanzanian Side Of Lake Victoria, Richard Joseph Kimwaga

Tanzania Journal of Engineering and Technology (TJET)

Lake Victoria’s water quality is increasingly becoming under heavy pressure mainly due to land based activities and aerial inputs which are taking place within the basin. This study was carried out to assess the spatial, including vertical and temporal, variation of the water quality of Lake Victoria on the Tanzanian side. Historical water quality data for the period from 2000 to 2016 was collected. Temperature, pH, Dissolved Oxygen (DO) and Turbidity were selected for study since they are the mostly measured and monitored water quality parameters. Land use-land cover changes were analysed using ArcGIS. ILWIS 3.7 software was used to …

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Reducing Adverse Impacts Of Amazon Hydropower Expansion, Alexander S. Flecker, Qinru Shi, Rafael M. Almeida, Héctor Angarita, Jonathan M. Gomes-Selman, Roosevelt García-Villacorta, Suresh A. Sethi, Steven A. Thomas, N Leroy Poff, Bruce R. Forsberg Feb 2022

Reducing Adverse Impacts Of Amazon Hydropower Expansion, Alexander S. Flecker, Qinru Shi, Rafael M. Almeida, Héctor Angarita, Jonathan M. Gomes-Selman, Roosevelt García-Villacorta, Suresh A. Sethi, Steven A. Thomas, N Leroy Poff, Bruce R. Forsberg

School of Earth, Environmental, & Marine Sciences Faculty Publications

Proposed hydropower dams at more than 350 sites throughout the Amazon require strategic evaluation of trade-offs between the numerous ecosystem services provided by Earth's largest and most biodiverse river basin. These services are spatially variable, hence collective impacts of newly built dams depend strongly on their configuration. We use multiobjective optimization to identify portfolios of sites that simultaneously minimize impacts on river flow, river connectivity, sediment transport, fish diversity, and greenhouse gas emissions while achieving energy production goals. We find that uncoordinated, dam-by-dam hydropower expansion has resulted in forgone ecosystem service benefits. Minimizing further damage from hydropower development requires considering …

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Evaluation Of Biofloc Technology Effects On White Leg Shrimp, Litopenaeus Vannamei Growth Performance And Water Quality Of Super-Intensive Culture Ponds, Yasser Abdul Kader Al-Gahwari, Ahmed Abdullah Al-Buhaishi Feb 2022

Evaluation Of Biofloc Technology Effects On White Leg Shrimp, Litopenaeus Vannamei Growth Performance And Water Quality Of Super-Intensive Culture Ponds, Yasser Abdul Kader Al-Gahwari, Ahmed Abdullah Al-Buhaishi

Hadhramout University Journal of Natural & Applied Sciences

Six grow-out ponds were designed with an area of 0.3 ha per pond. Each pond was stocked by 500 individual/m2 of Litopenaeus vannamei with an average weight of 0.26 g. Three ponds were used for biofloc technology (BFT) and other three were used for water exchange system (control). Waters of BFT were filtered, aerated, and fertilized by organic and inorganic materials to create blooms of microbial community, while the control waters were stocked without any fertilizers. In a period of over 140 days (20 weeks), the effects of BFT were evaluated on L. vannamei growth performance as well as …

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Cilia Proteins Are Biomarkers Of Altered Flow In The Vasculature, Ankan Gupta, Karthikeyan Thirugnanam, Madhan Thamilarasan, Ashraf M. Mohieldin, Hadeel T. Zedan, Shubhangi Prabhudesai, Meghan R. Griffin, Andrew D. Spearman, Amy Pan, Sean P. Palecek, Huseyin C. Yalcin, Surya M. Nauli, Kevin R. Rarick, Rahima Zennadi, Ramani Ramchandran Feb 2022

Cilia Proteins Are Biomarkers Of Altered Flow In The Vasculature, Ankan Gupta, Karthikeyan Thirugnanam, Madhan Thamilarasan, Ashraf M. Mohieldin, Hadeel T. Zedan, Shubhangi Prabhudesai, Meghan R. Griffin, Andrew D. Spearman, Amy Pan, Sean P. Palecek, Huseyin C. Yalcin, Surya M. Nauli, Kevin R. Rarick, Rahima Zennadi, Ramani Ramchandran

Pharmacy Faculty Articles and Research

Cilia, microtubule-based organelles that project from the apical luminal surface of endothelial cells (ECs), are widely regarded as low-flow sensors. Previous reports suggest that upon high shear stress, cilia on the EC surface are lost, and more recent evidence suggests that deciliation—the physical removal of cilia from the cell surface—is a predominant mechanism for cilia loss in mammalian cells. Thus, we hypothesized that EC deciliation facilitated by changes in shear stress would manifest in increased abundance of cilia-related proteins in circulation. To test this hypothesis, we performed shear stress experiments that mimicked flow conditions from low to high shear stress …

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Houtman Abrolhos Islands Fish Habitat Protection Area: A Summary Of Marine Resource Use And Ecological Attributes, Scott N. Evans, Nick Konzewitsch, Lynda M. Bellchambers Feb 2022

Houtman Abrolhos Islands Fish Habitat Protection Area: A Summary Of Marine Resource Use And Ecological Attributes, Scott N. Evans, Nick Konzewitsch, Lynda M. Bellchambers

Fisheries Research Reports

The Houtman Abrolhos Islands (Abrolhos) is an archipelago of up to 210 small islands and associated reefs located approximately 65-90 km offshore from Geraldton, Western Australia (WA). The islands and waters of the Abrolhos are of significance for both land-based and marine based values. The marine state territorial waters of the Abrolhos are managed by the Department of Primary Industries and Regional Development (DPIRD) as the Houtman Abrolhos Islands Fish Habitat Protection Area (Abrolhos FHPA). This report aims to provide a summary of the DPIRD data on aquatic resource use (e.g., aquaculture, commercial, recreational and charter fishing) and ecological attributes …

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Global And Regional Sea Level Rise Scenarios For The United States: Updated Mean Projections And Extreme Weather Level Probabilities Along U.S. Coastlines, William V. Sweet, Benjamin D. Hamlington, Robert E. Kopp, Christopher P. Weaver, Patrick L. Barnard, David Bekaert, William Brooks, Michael Craghan, Gregory Dusek, Thomas Frederikse, Gregory Garner, Ayesha S. Genz, John P. Krasting, Eric Larour, Doug Marcy, John J. Marra, Jayantha Obeysekera, Mark Osler, Matthew Pendleton, Daniel Roman, Lauren Schmied, Will Veatch, Kathleen D. White, Casey Zuzak Feb 2022

Global And Regional Sea Level Rise Scenarios For The United States: Updated Mean Projections And Extreme Weather Level Probabilities Along U.S. Coastlines, William V. Sweet, Benjamin D. Hamlington, Robert E. Kopp, Christopher P. Weaver, Patrick L. Barnard, David Bekaert, William Brooks, Michael Craghan, Gregory Dusek, Thomas Frederikse, Gregory Garner, Ayesha S. Genz, John P. Krasting, Eric Larour, Doug Marcy, John J. Marra, Jayantha Obeysekera, Mark Osler, Matthew Pendleton, Daniel Roman, Lauren Schmied, Will Veatch, Kathleen D. White, Casey Zuzak

National Oceanographic and Atmospheric Administration: Technical Reports and Related Materials

This report and accompanying datasets from the U.S. Sea Level Rise and Coastal Flood Hazard Scenarios and Tools Interagency Task Force provide 1) sea level rise scenarios to 2150 by decade that include estimates of vertical land motion and 2) a set of extreme water level probabilities for various heights along the U.S. coastline. These data are available at 1-degree grids along the U.S. coastline and downscaled specifically at NOAA tide-gauge locations. Estimates of flood exposure are assessed using contemporary U.S. coastal flood-severity thresholds for current conditions (e.g., sea levels and infrastructure footprint) and for the next 30 years (out …

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Mass Removal Efficiencies In Water And Consequences After A River Diversion Into Coastal Wetlands: Second Thoughts, R. Eugene Turner, Erik M. Swenson, James M. Lee, Charles S. Milan Feb 2022

Mass Removal Efficiencies In Water And Consequences After A River Diversion Into Coastal Wetlands: Second Thoughts, R. Eugene Turner, Erik M. Swenson, James M. Lee, Charles S. Milan

Faculty Publications

Salinity control, nutrient additions, and sediment supply were directly or indirectly the rationale for a $220 million coastal wetland restoration project (Davis Pond River Diversion) that began in 2002. We sampled Mississippi River water going in and out of the receiving basin from 1999 to 2018 to understand why wetland loss increased after it began. There was a reduction in inorganic sediments, nitrogen (N), and phosphorus (P) concentrations within the ponding area of 77%, 39% and 34%, respectively, which is similar to that in other wetlands. But the average sediment accumulation of 0.6 mm year(-1) inadequately balances the present-day 5.6 …

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Spatiotemporal Patterns In The Biomass Of Drift Macroalgae In The Indian River Lagoon, Florida, United States, Lauren M. Hall, Lori J. Morris, Robert H. Chamberlain, M. Dennis Hanisak, Robert W. Virnstein, Richard Paperno, Bernhard Riegl, L. Rex Ellis, Ali Simpson, Charles A. Jacoby Feb 2022

Spatiotemporal Patterns In The Biomass Of Drift Macroalgae In The Indian River Lagoon, Florida, United States, Lauren M. Hall, Lori J. Morris, Robert H. Chamberlain, M. Dennis Hanisak, Robert W. Virnstein, Richard Paperno, Bernhard Riegl, L. Rex Ellis, Ali Simpson, Charles A. Jacoby

Marine & Environmental Sciences Faculty Articles

Drift macroalgae plays key roles in the ecology of many coastal systems, including the Indian River Lagoon. In the lagoon, changes in the biomass of drift macroalgae may have interacted with an unprecedented bloom of phytoplankton in 2011. Patterns in the biomass of drift macroalgae were identified using new and original analyses of data from several sampling programs collected between 1997 and 2019. All available data show a relatively low biomass of drift macroalgae in 2010–2012, and surveys of fixed transects and seining as part of a fisheries independent monitoring program also recorded low biomass in 2016. Low light availability …

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