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2021

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Articles 241 - 270 of 359

Full-Text Articles in Marine Biology

Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey Mar 2021

Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey

Fisheries Research Articles

Offshore decommissioning activities are expected to increase as oil and gas subsea infrastructure becomes obsolete. Decisions on decommissioning alternatives will benefit from quantifying and understanding the marine communities associated with these structures. As a case study, fish assemblages associated with an inshore network of subsea pipelines located on the North West shelf of Western Australia were compared to those in surrounding natural reef and soft sediment habitats using remotely operated vehicles fitted with a stereo-video system (stereo-ROVs). The number of species, the abundance, biomass, feeding guild composition and the economic value of fishes were compared among habitats. The community composition …


Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey Mar 2021

Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey

Fisheries Research Articles

Offshore decommissioning activities are expected to increase as oil and gas subsea infrastructure becomes obsolete. Decisions on decommissioning alternatives will benefit from quantifying and understanding the marine communities associated with these structures. As a case study, fish assemblages associated with an inshore network of subsea pipelines located on the North West shelf of Western Australia were compared to those in surrounding natural reef and soft sediment habitats using remotely operated vehicles fitted with a stereo-video system (stereo-ROVs). The number of species, the abundance, biomass, feeding guild composition and the economic value of fishes were compared among habitats. The community composition …


Isolated Reefs Support Stable Fish Communities With High Abundances Of Regionally Fished Species, Matthew J. Birt, Katherine Cure, Shaun Wilson, Stephen J. Newman, Euan S. Harvey, Mark G. Meekan, Conrad W. Speed, Andrew Heyward, Jordan Goetze, James Gilmour Mar 2021

Isolated Reefs Support Stable Fish Communities With High Abundances Of Regionally Fished Species, Matthew J. Birt, Katherine Cure, Shaun Wilson, Stephen J. Newman, Euan S. Harvey, Mark G. Meekan, Conrad W. Speed, Andrew Heyward, Jordan Goetze, James Gilmour

Fisheries Research Articles

Anthropogenic impacts at isolated and inaccessible reefs are often minimal, offering rare opportunities to observe fish assemblages in a relatively undisturbed state. The remote Rowley Shoals are regarded as one of the healthiest reef systems in the Indian Ocean with demonstrated resilience to natural disturbance, no permanent human population nearby, low visitation rates, and large protected areas where fishing prohibitions are enforced. We used baited remote underwater video systems (BRUVS) to quantify fish assemblages and the relative abundance of regionally fished species within the lagoon, on the slope and in the mesophotic habitat at the Rowley Shoals at three times …


Caracuel_ Spiny Dogfish (Squalus Acanthias) Jaw, Nicolas M. Caracuel, David W. Kerstetter Mar 2021

Caracuel_ Spiny Dogfish (Squalus Acanthias) Jaw, Nicolas M. Caracuel, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Female Spiny Dogfish (Squalus acanthias) jaw collected in MBIO 3910 Lab on 11/03/2021 by Nicolas M. Caracuel.

2 cm tall at the center/middle of the jaw.

3.1cm tall at the hinges.

7.9 cm long from hinge to hinge.


Editorial: Deep Pelagic Ecosystem Dynamics In A Highly Impacted Water Column: The Gulf Of Mexico After Deepwater Horizon, Tracey Sutton, Kevin M. Boswell, Heather Bracken-Grissom, Jose V. Lopez, Michael Vecchione, Marsh Youngbluth Mar 2021

Editorial: Deep Pelagic Ecosystem Dynamics In A Highly Impacted Water Column: The Gulf Of Mexico After Deepwater Horizon, Tracey Sutton, Kevin M. Boswell, Heather Bracken-Grissom, Jose V. Lopez, Michael Vecchione, Marsh Youngbluth

Marine & Environmental Sciences Faculty Articles

The intermediate-sized midwater fauna (fishes, shrimps, and cephalopods; “micronekton” collectively) are dominant components of the pelagic ocean, which is by far the largest ecosystem type on Earth by several metrics (volume, organismal numbers, biomass, and productivity). Deep-pelagic micronekton, those animals residing in the water column below 200 m depth during the day, are the direct link between plankton and oceanic top predators, and through the linked processes of feeding and daily vertical migration facilitate one of Earth's most important ecosystem services to humans, carbon sequestration. Despite increasing recognition of this importance, a disconnect exists between stewardship and human impact; only …


Influence Of Microbial Priming And Seeding Depth On Germination And Growth Of Native Wildflowers, Daniela Barrera, Juan Luera, Kaitlynn Lavallee, Pushpa Soti Mar 2021

Influence Of Microbial Priming And Seeding Depth On Germination And Growth Of Native Wildflowers, Daniela Barrera, Juan Luera, Kaitlynn Lavallee, Pushpa Soti

School of Earth, Environmental, & Marine Sciences Faculty Publications

Background: Using native wildflowers for restoring marginal lands has gained considerable popularity. Establishment of wildflowers can be challenging due to several environmental factors. Restoring the microbial community in degraded habitats can potentially result in the native plant performance and habitat restoration. This study was conducted to investigate the impact of native soil microbes and seeding depth on germination of south Texas native wildflowers. Two wildflower species, Ratibida columnifera (Nutt.) (Mexican Hat) and Verbesina encelioides (Cav.) (cowpen daisy), were treated with microbial wash extracted from native soils, and germination rate was recorded for 14-day period. We further analyzed the growth, biomass …


Environmental Forcing On Zooplankton Distribution In The Coastal Waters Of The Galápagos Islands: Spatial And Seasonal Patterns In The Copepod Community Structure, Diego F. Figueroa Mar 2021

Environmental Forcing On Zooplankton Distribution In The Coastal Waters Of The Galápagos Islands: Spatial And Seasonal Patterns In The Copepod Community Structure, Diego F. Figueroa

School of Earth, Environmental, & Marine Sciences Faculty Publications

The oceanographic setting of the Galápagos Archipelago results in a spatially diverse marine environment suitable for a variety of species with different climatic requirements. The goal of this study is to demonstrate that the community of zooplankton in the Galápagos is highly structured by regional differences in productivity patterns and advective sources. Results are mostly based on biodiversity patterns of the copepod community collected over the Galápagos shelf between 2004 and 2006. Two contrasting marine environments were observed: a nutrientrich upwelling system with a shallow mixed layer and a diatom-dominated phytoplankton community in the west, and a non-upwelling system with …


Impacts Of Petroleum, Petroleum Components, And Dispersants On Organisms And Populations, Steven A. Murawski, Martin Grosell, Cynthia Smith, Tracey Sutton, Kenneth M. Halanych, Richard F. Shaw, Charles A. Wilson Mar 2021

Impacts Of Petroleum, Petroleum Components, And Dispersants On Organisms And Populations, Steven A. Murawski, Martin Grosell, Cynthia Smith, Tracey Sutton, Kenneth M. Halanych, Richard F. Shaw, Charles A. Wilson

Marine & Environmental Sciences Faculty Articles

Following the Deepwater Horizon blowout, oil, degraded oil, oil mixed with dispersants, and management responses to the spill affected a variety of Gulf of Mexico organisms. This review provides examples of various documented impacts, common patterns, and trends across organisms and/or their environments, and discusses future implications as well as directions for future research. Organism effects are generally characterized as lethal and sublethal. Sublethal can be short term, long term, or permanent and multigenerational. We present individual examples of effects on behavioral response, olfaction, vision, cardiac function, and gene shift, based on research done in laboratories, mesocosm settings, and the …


Seasonal Controls On Nearshore Hypoxia In A Small Coastal Embayment, Stephen Alexander Huie Mar 2021

Seasonal Controls On Nearshore Hypoxia In A Small Coastal Embayment, Stephen Alexander Huie

Physics

Dissolved oxygen (DO) is an important biogeochemical factor that strongly influences nearshore coastal ecosystems. Low DO (hypoxic) events can cause physiological stressful environments for ecological and economically important species, potentially leading to mass mortalities. In order to better assess drivers of coastal hypoxia, we collected data from monthly cruises on the inner shelf and nearshore moorings inside and outside a small coastal embayment (San Luis Obispo Bay on the Central California Coast) across the full upwelling season (March to August). During the late spring and early summer, we found that the nearshore near-bottom temperature-DO (T-DO) relationship aligned with the shelf …


The Response Of Marine Synechococcus To A Landscape Of Environmental Stressors: A Proteomic Exploration, Dana E. Michels Mar 2021

The Response Of Marine Synechococcus To A Landscape Of Environmental Stressors: A Proteomic Exploration, Dana E. Michels

Master's Theses

In the field of marine microbial ecology, many questions remain unanswered with regards to the physiological trade-offs made by phytoplankton to maximize growth (e.g., nutrient acquisition) and minimize loss (e.g., predation defenses). These tradeoffs, which occur at the cellular level, have wide reaching impacts on food web dynamics and global biogeochemical cycles. In the first chapter, we explored the use of a non-canonical amino acid (NCAA) technique, bioorthogonal non-canonical amino-acid tagging (BONCAT), in phytoplankton model systems. This technique has potential to work well in natural systems by enabling isolation of only newly synthesized proteins during an incubation period with the …


State Of Satiation Partially Regulates The Dynamics Of Vertical Migration, Ryan P. Bos, Tracey Sutton, Tamara Frank Feb 2021

State Of Satiation Partially Regulates The Dynamics Of Vertical Migration, Ryan P. Bos, Tracey Sutton, Tamara Frank

Marine & Environmental Sciences Faculty Articles

Vertical migrations into shallower waters at night are beneficial for migrators as they reduce predation risk and allow migrators to encounter a higher density of prey. Nevertheless, ocean acoustics data and trawl data have shown that a portion of some vertically migrating populations remain at depth and do not migrate. One hypothesis for this phenomenon is the Hunger-Satiation hypothesis, which in part states that the non-migrating portion of the migrating species-assemblage refrains from migrating if they have full or partially full stomachs from daytime or nocturnal feeding. However, stomach fullness of the non-migrating subpopulation compared to the migrating portion has …


Updated Status Of Bayou Darter, A Narrowly Ranged Endemic In A Geomorphically Active Watershed, Joshua Hubbell, Loren Stearman, Jacob Schaefer Feb 2021

Updated Status Of Bayou Darter, A Narrowly Ranged Endemic In A Geomorphically Active Watershed, Joshua Hubbell, Loren Stearman, Jacob Schaefer

Faculty Publications

Comparison of historical and current data are critical in establishing population trends for imperiled taxa. In this paper we revisit the status of the Bayou darter Nothonotus rubrum, an endemic fish restricted to the Bayou Pierre river system, Mississippi, USA. The Bayou Pierre has experienced substantial geomorphic change in the past century, leading to questions about persistence of this imperiled species. We employed historical field notes and museum records to identify collection localities, and we resampled 32 of these localities using methodologies comparable to the original samples. We further sampled an additional 10 sites with similar methodologies to fill …


Comparison Of A Smartfin With An Infrared Sea Surface Temperature Radiometer In The Atlantic Ocean, Robert J. W. Brewin, Werenfrid Wimmer, Phillip J. Bresnahan, Tyler Cyronak, Andreas J. Andersson, Giorgio Dall’Olmo Feb 2021

Comparison Of A Smartfin With An Infrared Sea Surface Temperature Radiometer In The Atlantic Ocean, Robert J. W. Brewin, Werenfrid Wimmer, Phillip J. Bresnahan, Tyler Cyronak, Andreas J. Andersson, Giorgio Dall’Olmo

Marine & Environmental Sciences Faculty Articles

The accuracy and precision of satellite sea surface temperature (SST) products in nearshore coastal waters are not well known, owing to a lack of in-situ data available for validation. It has been suggested that recreational watersports enthusiasts, who immerse themselves in nearshore coastal waters, be used as a platform to improve sampling and fill this gap. One tool that has been used worldwide by surfers is the Smartfin, which contains a temperature sensor integrated into a surfboard fin. If tools such as the Smartfin are to be considered for satellite validation work, they must be carefully evaluated against state-of-the-art techniques …


An Ecotoxicological Approach To Microplastics On Terrestrial And Aquatic Organisms: A Systematic Review In Assessment, Monitoring And Biological Impact, Omar A. Vazquez, Saydur Rahman Feb 2021

An Ecotoxicological Approach To Microplastics On Terrestrial And Aquatic Organisms: A Systematic Review In Assessment, Monitoring And Biological Impact, Omar A. Vazquez, Saydur Rahman

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Marine and land plastic debris biodegrades at micro- and nanoscales through progressive fragmentation. Oceanographic model studies confirm the presence of up to ~2.41 million tons of microplastics across the Atlantic, Pacific, and Indian subtropical gyres. Microplastics distribute from primary (e.g., exfoliating cleansers) and secondary (e.g., chemical deterioration) sources in the environment. This anthropogenic phenomenon poses a threat to the flora and fauna of terrestrial and aquatic ecosystems as ingestion and entanglement cases increase over time. This review focuses on the impact of microplastics across taxa at suggested environmentally relevant concentrations, and advances the groundwork for future ecotoxicological-based research on microplastics …


Environmental Drivers Of Mesophotic Echinoderm Assemblages Of The Southeastern Pacific Ocean, Ariadna Mecho, Boris Dewitte, Javier Sellanes, Simon Van Gennip, Erin E. Easton, Joao B. Gusmao Feb 2021

Environmental Drivers Of Mesophotic Echinoderm Assemblages Of The Southeastern Pacific Ocean, Ariadna Mecho, Boris Dewitte, Javier Sellanes, Simon Van Gennip, Erin E. Easton, Joao B. Gusmao

School of Earth, Environmental, & Marine Sciences Faculty Publications

Mesophotic ecosystems (50–400 m depth) of the southeastern Pacific have rarely been studied because of the logistical challenges in sampling across this remote zone. This study assessed how oxygen concentrations and other environmental predictors explain variation in echinoderm assemblages at these mesophotic systems, where this group is among the predominant fauna. We compiled data on echinoderm taxa at 91 sampling stations, from historical and recent surveys (between 1950 and 2019), covering a longitudinal gradient of approximately 3,700 km along with the Nazca, Salas y Gómez, and Juan Fernández ridges. Uni- and multivariate model-based tools were applied to analyze the patterns …


Comparative Effects Of Chemical And Physical Sunscreen On Fertilization Of Purple Sea Urchins (Strongylocentrotus Purpuratus), Marilla Lippert, Maurice Codespoti Goodman, Nikki Adams Feb 2021

Comparative Effects Of Chemical And Physical Sunscreen On Fertilization Of Purple Sea Urchins (Strongylocentrotus Purpuratus), Marilla Lippert, Maurice Codespoti Goodman, Nikki Adams

Biological Sciences

Organic compound-based “chemical” sunscreens dominate the commercial sunscreen market, but recent research has revealed the ingredients of these products are detrimental to the health of marine organisms. This revelation has led to increased popularity of mineral-based “physical” sunscreens, primarily containing zinc-oxide (ZnO), as environmentally safe alternatives. While they are marketed as environmentally safe, these claims are largely untested, and it is important to consider potential effects of ZnO-based sunscreens on the development of marine organisms. Though Zn is a necessary micronutrient in the ocean, excess Zn is released into marine environments from anthropogenic sources has negative effects on marine life. …


Identifying Nitrogen Source And Seasonal Variation In A Black Mangrove (Avicennia Germinans) Communityof The South Texas Coast, Ashley Elizabeth Murphy, Carlos E. Cintra-Buenrostro, Alejandro Fierro-Cabo Feb 2021

Identifying Nitrogen Source And Seasonal Variation In A Black Mangrove (Avicennia Germinans) Communityof The South Texas Coast, Ashley Elizabeth Murphy, Carlos E. Cintra-Buenrostro, Alejandro Fierro-Cabo

School of Earth, Environmental, & Marine Sciences Faculty Publications

Black mangrove (Avicennia germinans) stands in south Texas grow in association with other autotrophic organisms including herbaceous halophytes and cyanobacterial mats. Despite the relevant ecosystem services provided by this coastal plant community, limited information exists on its functioning, in particular as it pertains to nutrient dynamics, namely nitrogen (N). Nitrogen stable isotopes were used to assess potential N sources for plant growth in this community. Plant tissue (leaves), cyanobacteria, and sediment were sampled once every season for one year. Total N in A. germinans (2.6 %) and associated saltwort (Batis maritima) (2.1 %) was higher than in cyanobacteria (0.6 %), …


Influence Of Land Use Intensity And Management On Arbuscular Mycorrhizal Fungi-Avocado Symbiosis, Pushpa Soti, Bulent Toprak, Nina De La Rosa, Krish Jayachandran Feb 2021

Influence Of Land Use Intensity And Management On Arbuscular Mycorrhizal Fungi-Avocado Symbiosis, Pushpa Soti, Bulent Toprak, Nina De La Rosa, Krish Jayachandran

School of Earth, Environmental, & Marine Sciences Faculty Publications

This study was done to assess the effect of soil disturbance on arbuscular mycorrhizal fungi spore abundance and root colonization in avocado (Persea americana Mill.). Rhizosphere soil and root samples of avocado were collected from different farms in south Florida and analyzed for degree of mycorrhizal colonization in roots, spore density and diversity in soil along with soil characteristics. There was significant difference in the soil characteristics among the different farms. Similarly, there was a significant difference in the degree of mycorrhizal colonization in the roots and the arbuscular mycorrhizal fungi spore morphotypes among different land use and management practices. …


Using Aerial Photogrammetry And Sexually Dimorphic Measurements To Investigate Seasonal Differences In School Composition Of Delphinus Spp. Off Southern California, Samantha Gm Leander Jan 2021

Using Aerial Photogrammetry And Sexually Dimorphic Measurements To Investigate Seasonal Differences In School Composition Of Delphinus Spp. Off Southern California, Samantha Gm Leander

Theses

Insights into school composition can provide a means to understand basic biology and ecology, including reproductive patterns. They can also be applied to conservation assessments, allowing for better understanding of the potentially differential vulnerability of demographic groups to natural or anthropogenic disturbances that may influence their populations. However, the two subspecies of common dolphins in the waters off California (Delphinus delphis delphis and D. d. bairdii) form large, energetic groups that make characterization of school composition difficult. Remotely controlled drones now offer the opportunity for the study of school composition in Delphinus spp., allowing for precise morphometric measurements …


Developing A Method To Track Marine Snow Aggregation Through Individual Collisions Using Stereoscopic Imaging, Riley Henning Jan 2021

Developing A Method To Track Marine Snow Aggregation Through Individual Collisions Using Stereoscopic Imaging, Riley Henning

Theses

The aggregation of individual phytoplankton into marine snow allows particles to sink more quickly, thus resulting in the transport of particulate organic carbon from surface waters to the deep ocean. Aggregate formation has previously been measured in experiments indirectly by quantifying how particle size or particle concentration changes over time. Here, I present my thesis in which I applied high-resolution imaging to quantify aggregate formation using two different methodologies.

We conducted experiments to investigate aggregate formation using stereoscopic imaging, tracking individual particles directly in a 3D volume. Phytoplankton cultures were rolled in cylindrical tanks and imaged by two cameras illuminated …


Otolith Microchemistry Reveals Low Habitat Connectivity Of California Killifish (Fundulus Parvipinnis) Across A Range Of Spatial Scales, Lisa Robison Jan 2021

Otolith Microchemistry Reveals Low Habitat Connectivity Of California Killifish (Fundulus Parvipinnis) Across A Range Of Spatial Scales, Lisa Robison

Theses

As wetlands face continued fragmentation worldwide, an understanding of habitat connectivity and how fishes that rely on these environments is imperative to conduct effective marine management. Site fidelity and habitat connectivity are vital measures of the interdependence of fish populations living in neighboring marshes (or in regions of a single marsh).

Here, we examine the habitat connectivity, site fidelity, and movement of California killifish (Fundulus parvipinnis) within and among three estuaries in Southern California through otolith microelemental analysis. Assessing the site fidelity of estuarine fishes is important to determine the level of connectivity between spatially distinct populations within …


Atlantic Sailfish (Istiophorus Albicans) Distribution Off The East Coast Of Florida From 2003 To 2018 In Response To Sea Surface Temperature, Meredith M. Pratt Jan 2021

Atlantic Sailfish (Istiophorus Albicans) Distribution Off The East Coast Of Florida From 2003 To 2018 In Response To Sea Surface Temperature, Meredith M. Pratt

Mako: NSU Undergraduate Student Journal

The Atlantic sailfish (Istiophorus albicans) ranges from 40°N to 40°S in the Western Atlantic Ocean and has great economic and recreational value for sport fishers. Off the east coast of Florida, recreational fishing boats often target this species due to its size, speed and strength. This project aimed to determine the relationship between sea surface temperature (SST) and the distribution of Atlantic sailfish caught and released over a fifteen-year period (2003 to 2018). Tagging information was collected from The Billfish Foundation and NOAA who have the most extensive programs for billfish. Using the time and location of each …


An Indo-Pacifc Coral Spawning Database, Andrew H. Baird, James R. Guest, Alasdair J. Edwards, Andrew G. Bauman, Jessica Bouwmeester, Hanaka Mera, David Abrego, Mariana Alvera-Noriega, Russel C. Babcock, Miguel B. Barbosa, Victor Bonito, John Burt, Patrick C. Cabaitan, Ching-Fong Chang, Suchana Chavanich, Chaolun A. Chen, Chieh-Jhen Chen, Wei-Jen Chen, Fung-Chen Chung, Sean R. Connolly, Vivian R. Cumbo, Maria Dornelas, Christopher Doropoulos, Gal Eyal, Lee Eyal-Shaham, Nur Fadli, Joana Figueiredo, Jean-François Flot, Sze-Hoon Gan, Elizabeth Gomez, Erin M. Graham, Mila Grinblat, Nataly Gutiérrez-Isaza, Saki Harii, Peter L. Harrison, Masayuki Hatta, Nina Ann Jin Ho, Gaetan Hoarau, Mia Hoogenboom, Emily J. Howells, Akira Iguchi, Naoko Isomura, Emmeline A. Jamodiong, Suppakarn Jandang, Jude Keyse, Seiya Kitanobo, Narinratana Kongjandtre, Chao-Yang Kuo, Charlon Ligson, Che-Hung Lin, Jeffrey Low, Yossi Loya, Elizaldy A. Maboloc, Joshua S. Madin, Takuma Mezaki, Choo Min, Masaya Morita, Aurelie Moya, Su-Hwei Neo, Matthew R. Nitschke, Satoshi Nojima, Yoko Nozawa, Srisakul Piromvaragorn, Sakanan Plathong, Eneour Puill-Stephan, Kate Quigley, Catalina Ramirez-Portilla, Gerard Ricardo, Kazuhiko Sakai, Eugenia Sampayo, Tom Shlesinger, Leony Sikim, Chris Simpson, Carrie A. Sims, Frederic Sinniger, Davies A. Spiji, Tracy Tabalanza, Chung-Hong Tan, Tullia I. Terraneo, Gergely Torda, James True, Karenne Tun, Kareen Vicentuan, Voranop Viyakarn, Zarinah Waheed, Selina Ward, Bette Willis, Rachael M. Woods, Erika S. Woolsey, Hiromi H. Yamamoto, Syafyudin Yusuf Jan 2021

An Indo-Pacifc Coral Spawning Database, Andrew H. Baird, James R. Guest, Alasdair J. Edwards, Andrew G. Bauman, Jessica Bouwmeester, Hanaka Mera, David Abrego, Mariana Alvera-Noriega, Russel C. Babcock, Miguel B. Barbosa, Victor Bonito, John Burt, Patrick C. Cabaitan, Ching-Fong Chang, Suchana Chavanich, Chaolun A. Chen, Chieh-Jhen Chen, Wei-Jen Chen, Fung-Chen Chung, Sean R. Connolly, Vivian R. Cumbo, Maria Dornelas, Christopher Doropoulos, Gal Eyal, Lee Eyal-Shaham, Nur Fadli, Joana Figueiredo, Jean-François Flot, Sze-Hoon Gan, Elizabeth Gomez, Erin M. Graham, Mila Grinblat, Nataly Gutiérrez-Isaza, Saki Harii, Peter L. Harrison, Masayuki Hatta, Nina Ann Jin Ho, Gaetan Hoarau, Mia Hoogenboom, Emily J. Howells, Akira Iguchi, Naoko Isomura, Emmeline A. Jamodiong, Suppakarn Jandang, Jude Keyse, Seiya Kitanobo, Narinratana Kongjandtre, Chao-Yang Kuo, Charlon Ligson, Che-Hung Lin, Jeffrey Low, Yossi Loya, Elizaldy A. Maboloc, Joshua S. Madin, Takuma Mezaki, Choo Min, Masaya Morita, Aurelie Moya, Su-Hwei Neo, Matthew R. Nitschke, Satoshi Nojima, Yoko Nozawa, Srisakul Piromvaragorn, Sakanan Plathong, Eneour Puill-Stephan, Kate Quigley, Catalina Ramirez-Portilla, Gerard Ricardo, Kazuhiko Sakai, Eugenia Sampayo, Tom Shlesinger, Leony Sikim, Chris Simpson, Carrie A. Sims, Frederic Sinniger, Davies A. Spiji, Tracy Tabalanza, Chung-Hong Tan, Tullia I. Terraneo, Gergely Torda, James True, Karenne Tun, Kareen Vicentuan, Voranop Viyakarn, Zarinah Waheed, Selina Ward, Bette Willis, Rachael M. Woods, Erika S. Woolsey, Hiromi H. Yamamoto, Syafyudin Yusuf

Marine & Environmental Sciences Faculty Articles

The discovery of multi-species synchronous spawning of scleractinian corals on the Great Barrier Reef in the 1980s stimulated an extraordinary effort to document spawning times in other parts of the globe. Unfortunately, most of these data remain unpublished which limits our understanding of regional and global reproductive patterns. The Coral Spawning Database (CSD) collates much of these disparate data into a single place. The CSD includes 6178 observations (3085 of which were unpublished) of the time or day of spawning for over 300 scleractinian species in 61 genera from 101 sites in the Indo-Pacific. The goal of the CSD is …


Thermal Acclimation Of Tropical Coral Reef Fishes To Global Heat Waves, Jacob L. Johansen, Lauren E. Nadler, Adam Habary, Alyssa J. Bowden, Jodie Rummer Jan 2021

Thermal Acclimation Of Tropical Coral Reef Fishes To Global Heat Waves, Jacob L. Johansen, Lauren E. Nadler, Adam Habary, Alyssa J. Bowden, Jodie Rummer

Marine & Environmental Sciences Faculty Articles

As climate-driven heat waves become more frequent and intense, there is increasing urgency to understand how thermally sensitive species are responding. Acute heating events lasting days to months may elicit acclimation responses to improve performance and survival. However, the coordination of acclimation responses remains largely unknown for most stenothermal species. We documented the chronology of 18 metabolic and cardiorespiratory changes that occur in the gills, blood, spleen, and muscles when tropical coral reef fishes are thermally stressed (+3.0°C above ambient). Using representative coral reef fishes (Caesio cuning and Cheilodipterus quinquelineatus) separated by >100 million years of evolution and …


Large-Scale Edna Metabarcoding Survey Reveals Marine Biogeographic Break And Transitions Over Tropical North-Western Australia, Katrina M. West, Michael J. Travers, Michael Stat, Euan S. Harvey, Zoe T. Richards, Joseph D. Dibattista, Stephen J. Newman, Alastair V. Harry, Craig L. Skepper, Matthew Heydenrych, Michael Bunce Jan 2021

Large-Scale Edna Metabarcoding Survey Reveals Marine Biogeographic Break And Transitions Over Tropical North-Western Australia, Katrina M. West, Michael J. Travers, Michael Stat, Euan S. Harvey, Zoe T. Richards, Joseph D. Dibattista, Stephen J. Newman, Alastair V. Harry, Craig L. Skepper, Matthew Heydenrych, Michael Bunce

Fisheries Research Articles

Environmental DNA (eDNA) metabarcoding has demonstrated its applicability as a highly sensitive biomonitoring tool across small spatial and temporal scales in marine ecosystems. However, it has rarely been tested across large spatial scales or biogeographical barriers. Here, we scale up marine eDNA metabarcoding, test its ability to detect a major marine biogeographic break and evaluate its use as a regional biomonitoring tool in Australia.


Nuclear Niño Response Observed In Simulations Of Nuclear War Scenarios, Joshua Coupe, Samantha Stevenson, Nicole S. Lovenduski, Tyler Rohr, Cheryl S. Harrison, Alan Robock, Holly Olivarez, Charles G. Bardeen, Owen B. Toon Jan 2021

Nuclear Niño Response Observed In Simulations Of Nuclear War Scenarios, Joshua Coupe, Samantha Stevenson, Nicole S. Lovenduski, Tyler Rohr, Cheryl S. Harrison, Alan Robock, Holly Olivarez, Charles G. Bardeen, Owen B. Toon

School of Earth, Environmental, & Marine Sciences Faculty Publications

The climate impacts of smoke from fires ignited by nuclear war would include global cooling and crop failure. Facing increased reliance on ocean-based food sources, it is critical to understand the physical and biological state of the post-war oceans. Here we use an Earth system model to simulate six nuclear war scenarios. We show that global cooling can generate a large, sustained response in the equatorial Pacific, resembling an El Niño but persisting for up to seven years. The El Niño following nuclear war, or Nuclear Niño, would be characterized by westerly trade wind anomalies and a shutdown of equatorial …


Evaluating The Use Of Marine Protected Areas By Endangered Species: A Habitat Selection Approach, Kelsey E. Roberts, Brian J. Smith, Derek Burkholder, Kristen M. Hart Jan 2021

Evaluating The Use Of Marine Protected Areas By Endangered Species: A Habitat Selection Approach, Kelsey E. Roberts, Brian J. Smith, Derek Burkholder, Kristen M. Hart

Marine & Environmental Sciences Faculty Articles

1. Optimizing the design of marine protected area (MPA) networks for the conservation of migratory marine species and their habitats involves a suite of important considerations, such as appropriate scale requirements and the distribution of anthropogenic impacts. Often, a fundamental component of the conservation planning process is delineating areas of high use or high biodiversity within a region of interest.

2. However, basing conservation strategies off merely the number of individuals in an ecosystem is outdated and potentially subject to arbitrary thresholds. To be effective at protecting marine megafauna, MPAs would ideally encompass habitats used by focal species. Through satellite-tracking …


A Multi-Modal Approach To Measuring Particulate Iron Speciation In Buoyant Hydrothermal Plumes, Brandy D. Stewart, Jeffry V. Sorensen, Kathleen Wendt, Jason B. Sylvan, Christopher R. German, Karthik Anantharaman, Gregory J. Dick, John A. Breier, Brandy M. Toner Jan 2021

A Multi-Modal Approach To Measuring Particulate Iron Speciation In Buoyant Hydrothermal Plumes, Brandy D. Stewart, Jeffry V. Sorensen, Kathleen Wendt, Jason B. Sylvan, Christopher R. German, Karthik Anantharaman, Gregory J. Dick, John A. Breier, Brandy M. Toner

School of Earth, Environmental, & Marine Sciences Faculty Publications

Processes active within buoyant hydrothermal plumes are expected to modulate the flux of elements, such as Fe, to the deep ocean; however, they are yet to be described in a comprehensive manner through observations or models. In this study, we compare observed particulate Fe (pFe) speciation with thermodynamic (equilibrium) reaction path modeling for three vent fields in the Eastern Lau Spreading Center (ELSC). At each site, particles were collected from the buoyant rising portion of hydrothermal plumes using in situ filtration with a Remotely Operated Vehicle. Filter bound particles were analyzed by synchrotron micro-probe X-ray fluorescence mapping (XRF), X-ray diffraction …


Late Afternoon Seasonal Transition To Dissolution In A Coral Reef: An Early Warning Of A Net Dissolving Ecosystem?, Laura Stoltenberg, Kai G. Schulz, Coulson A. Lantz, Tyler Cyronak, Bradley D. Eyre Jan 2021

Late Afternoon Seasonal Transition To Dissolution In A Coral Reef: An Early Warning Of A Net Dissolving Ecosystem?, Laura Stoltenberg, Kai G. Schulz, Coulson A. Lantz, Tyler Cyronak, Bradley D. Eyre

Marine & Environmental Sciences Faculty Articles

There are concerns that reefs will transition from net calcifying to net dissolving in the near future due to decreasing calcification and increasing dissolution rates. Here we present in situ rates of net ecosystem calcification (NEC) and net ecosystem production (NEP) on a coral reef flat using a slack-water approach. Up until dusk, the reef was net calcifying in most months but shifted to net dissolution in austral summer, coinciding with high respiration rates and a lower aragonite saturation state (Ωarag). The estimated sediment contribution to NEC ranged from 8 – 21 % during the day and 45 …


Species Sensitivity Assessment Of Five Atlantic Scleractinian Coral Species To 1-Methylnaphthalene, Dorothy-Ellen A. Renegar, Nicholas Turner Jan 2021

Species Sensitivity Assessment Of Five Atlantic Scleractinian Coral Species To 1-Methylnaphthalene, Dorothy-Ellen A. Renegar, Nicholas Turner

Marine & Environmental Sciences Faculty Articles

Coral reefs are keystone coastal ecosystems that are at risk of exposure to petroleum from a range of sources, and are one of the highest valued natural resources for protection in Net Environmental Benefit Analysis (NEBA) in oil spill response. Previous research evaluating dissolved hydrocarbon impacts to corals reflected no clear characterization of sensitivity, representing an important knowledge gap in oil spill preparedness related to the potential impact of oil spills to the coral animal and its photosymbiont zooxanthellae. This research addresses this gap, using a standardized toxicity protocol to evaluate effects of a dissolved reference hydrocarbon on scleractinian corals. …