Marine Biology Commons^™

Effects Of Synthetic Estrogen (17Α-Ethinyl Estradiol) On Male Fiddler Crab Aggression, Micayla Shirley

Honors College Theses

Pharmaceuticals, including hormones and antibiotics, are considered contaminants due to their widespread use and release into the environment. Hormones, like the synthetic estrogen used in oral contraceptives (17α-ethinylestradiol), are present in freshwater and marine systems, but with relatively unknown effects on the organisms that live there. Ethinylestradiol (EE2) accumulates in waterlogged soil (sediment) with potential to harm sediment-dwelling animals. For example, fiddler crabs (Uca pugilator) are vital members of salt marsh communities. Their burrowing adds oxygen to sediments and cycles nutrients, and they are an important food resource to birds and raccoons. Male fiddler crabs are territorial, aggressively …

The Potential Influence Of Abiotic Conditions On Mussel Species Abundance In San Francisco Bay, Alexandra G. Farrell, M. Christina Vasquez Dr.

Honors Thesis

Climate change has negatively altered seawater conditions, which may have severe implications for marine ecosystems. Mussels are susceptible to environmental changes since they are primary consumers and filter-feeding bivalves. Two species of particular interest to the West Coast of the U.S. are Mytilus galloprovincialis and M. trossulus. M. trossulus is native to the California Coast and was historically prevalent from Southern California to Washington. However, with increased shipping and rising seawater temperature, M. galloprovincialis, an invasive species from the Mediterranean, pushed the species range of M. trossulus poleward. M. trossulus is more tolerant of cold seawater with variable salinity while …

Assessing The Occurrence Of Trichechus Manatus Latirostris In Mobile Bay, Alabama Using Edna, Elora Pierce

Honors Theses

In the past several decades Florida manatees (Trichechus manatus latirostris) have begun to expand their summer range into the northern Gulf of Mexico. Because this is a recent occurrence, not much is known about their habitat use and distribution in this region. Citizen-sourced sighting data suggests that Florida manatees frequent subembayments of Mobile Bay, Alabama, reaching a sighting peak in August. To assess the occurrence of manatees in this area environmental DNA surveys were used from winter (February 19-20) and summer (August 21-22) of 2018. At each of the 21 sites ranging from the mouth of Mobile Bay, …

Results Of The Non-Lethal Smart Drumline Trial In South-Western Australia Between 21 February 2019 And 20 February 2021, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

An Assessment On Microplastic Pollution In The Resacas Of The Lower Rio Grande Valley, Texas, Wesley D. Franklin

Theses and Dissertations

Microplastic pollution is a serious issue that impacts most aquatic environments. Microplastics have the potential to cause numerous detriments to the fitness and reproductive capability of many organisms. The resacas of the Lower Rio Grande are an understudied area that could be sinks for large congregations of microplastics. We analyze microplastic pollution in two species of fish as well as the sediment and water of eleven different pools from four resaca systems. We find that microplastics are present in every pool sampled.

Altogether 218 microplastic pieces are found from the water, sediment and fish samples. We find that microplastics are …

Geographic Variability In The Reproductive Hormones And Oocyte Maturation Of Bonefish (Albula Vulpes) In The Bahamas, Ashley Yarbrough

Theses and Dissertations

Bonefish (Albula vulpes) are an extremely popular sport fish that are a vital component of the multimillion-dollar recreational flats fishery. Despite its economic importance for many countries, there is little information available about many aspects of their reproductive biology. Significant gaps include analysis of the hormones that influence oocyte development and the nutrient levels in oocytes that drive embryonic and early larval development and how these parameters vary among habitats. The goals of this study were to characterize and quantify the reproductive hormones, oocyte developmental stages, and nutrient composition of oocytes from fish at or near spawning sites across multiple …

Trophic Ecology Of Mesopelagic Fish Larvae And Juveniles In The Northern Gulf Of Mexico, Emily Gipson

Master's Theses

The deep-pelagic environment encompasses ocean waters below 200 m depth, and comprises 90% of the volume of the Gulf of Mexico. Deep-pelagic fishes are important prey for many oceanic consumers, but relatively little is known about their early life history, including larval fish trophic ecology. An understanding of the role deep-pelagic fish larvae have in oceanic food webs is important in the development of ecosystem models that examine the connectivity (via vertical migrations) between the deep-pelagic and epipelagic environments with respect to trophic interactions, nutrient cycling, and carbon sequestration. In this study, archived plankton samples collected during 2010 and 2011 …

Effects Of Ibuprofen On Duration Of Fear Responses In Red Claw Crabs, Ryan Shaffer

Thinking Matters Symposium

Pharmaceutical pollution is a growing environmental issue. Chemicals engineered to affect humans persist in the water system and may have unintended effects on animal behavior. Ibuprofen is an anti-inflammatory drug shown to reduce predator avoidance in fish. I chose to examine the effects of ibuprofen on the foraging behavior of red clawed crab (Perisesarma bidens) by measuring time spent in the open. Crabs typically spend most of their time hiding and only expose themselves to danger in order to forage for food. I predicted that crabs treated with the high dose of ibuprofen will spend less time hiding compared to …

Effects Of Tropical Cyclones On Incubation And Hatch Frequency Of Marine Turtles In Broward County, Fl: An Exploratory Look For Potential Cues Of Environmentally Cued Hatching (Ech), Alexis Peterson

All HCAS Student Capstones, Theses, and Dissertations

Due to climate change and warming sea surface temperatures (SST), the intensity and frequency of tropical cyclones in the North Atlantic are continuing to increase. Tropical cyclones have many direct and indirect effects on coastal and marine species, such as sea turtles. Sea turtles are extremely vulnerable to climate change, due to having life history, physiology, and behavioral traits that are heavily influenced by environmental factors (Fuentes and Porter 2013). This study examined whether tropical cyclones serve as a triggering event for environmentally cued hatching (ECH) in loggerhead (Caretta caretta) and green (Chelonia mydas) turtle nests …

Eelgrass Restoration In San Francisco Bay: An Interdisciplinary Stated Preference Classroom Experiment, Camille M. Antinori

Journal of Ocean and Coastal Economics

This paper aims to integrate experiential, interdisciplinary approaches into environmental economics courses through a stated preference analysis for eelgrass beds harboring aquatic plants foundational to many estuaries and coastal zones. It argues that such approaches are necessary in undergraduate education to support real-world needs in oceans and climate policy. Through collaboration with ecologists and peers, students developed willingness-to-pay measures of $35 and $42 for a 10-year restoration program for 200 acres of eelgrass (Zostera marina) in the San Francisco Bay based on open- and closed-ended elicitation formats. The experiment provides an example of overcoming the challenge of orienting …

Seaweed Monitoring In The Great Bay Estuary, Nh: 2020 Annual Report, Andrew Payne, David M. Burdick, Gregg Moore, Natalie White, Christopher Peter, Arthur Mathieson

Jackson Estuarine Laboratory

As water temperatures rise due to global warming and nitrogen inputs change, it is important to understand how these changes are impacting vegetative communities that form the basic habitat structure in the Great Bay Estuary, NH. The abundance and taxa of intertidal seaweeds have been monitored at fixed locations throughout the Estuary since 2013. In 2020, percent cover and biomass were collected from five intertidal and four subtidal sampling locations. Data from 2013-2020 show appreciable amounts of nuisance seaweeds (primarily reds), including several introduced species. Cover of green seaweeds decreased significantly over time at the two intertidal sites (Depot Road …

Photographs Of Seaweeds In Intertidal Monitoring Plots, 2020, David M. Burdick, Gregg Moore

Jackson Estuarine Laboratory

Records of photographs of intertidal seaweed sampling plots for cover (50 by 50 cm) and biomass (25 by 25 cm) collected by Jackson Estuarine Laboratory research staff in 2020.

Subtidal Seaweed And Eelgrass Monitoring Photographs 2020, David M. Burdick, Gregg E. Moore

Jackson Estuarine Laboratory

Records of photographs of subtidal seaweed and eelgrass sampling plots for cover (50 by 50 cm) collected by Jackson Estuarine Laboratory research staff in 2020.

Reconstructing Primary Production In A Changing Estuary: A Mass Balance Modeling Approach, Jongsun Kim, Mark J. Brush, Bongkeun Song, Iris C. Anderson

School of Earth, Environmental, & Marine Sciences Faculty Publications

Estuarine primary production (PP) is a critical rate process for understanding ecosystem function and response to environmental change. PP is fundamentally linked to estuarine eutrophication, and as such should respond to ongoing efforts to reduce nutrient inputs to estuaries globally. However, concurrent changes including warming, altered hydrology, reduced input of sediments, and emergence of harmful algal blooms (HABs) could interact with nutrient management to produce unexpected changes in PP. Despite its fundamental importance, estuarine PP is rarely measured. We reconstructed PP in the York River Estuary with a novel mass balance model based on dissolved inorganic nitrogen (DIN) for the …

Optimization Of Grow-Out Of Bouldering Coral Microfragments: Land Vs. Offshore Nursery, Ashlee A. Steinberg

All HCAS Student Capstones, Theses, and Dissertations

Corals along the Florida Reef Tract and the wider Caribbean have been declining for decades. Low densities of adult colonies hinder the ability of corals to replenish themselves through sexual reproduction, thus reef managers are focusing on restoration actions that increase coral biomass. Microfragmentation is a way to quickly increase the biomass of bouldering corals by cutting the coral into small pieces which forces the coral to allocate its resources away from reproduction and back into growth, increasing its growth rate. This study assessed the optimal location for grow-out (land vs. offshore nursery) and its synergy with size of fragment …

Winter Skate (Leucoraja Ocellata) Neurocranium, Daulton J. Scharf, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Prepared Winter Skate Jaw

Winter Skate (Leucoraja Ocellata) Jaw, Krystal Renta, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw prep from Winter Skate (Leucoraja ocellata)

Rapid Population Decline Of The Pillar Coral Dendrogyra Cylindrus Along The Florida Reef Tract, Karen L. Neely, Cynthia L. Lewis, Kathleen S. Lunz, Lystina Kabay

Marine & Environmental Sciences Faculty Articles

Coral reefs worldwide are in a state of decline, but the population status and impacts of stressors for rare species are generally not well documented using broad-scale monitoring protocols. We fate-tracked all known colonies of the pillar coral, Dendrogyra cylindrus, on the Florida Reef Tract (FRT) from 2013 to 2020 to assess population condition and trend, and to document the relative impacts of chronic and acute stressors. Large average colony size, an absence of juveniles, and large geographic distances between genotypes suggest that the Florida D. cylindrus population has been reproductively extinct for decades. During the study period, low-intensity …

Barndoor Skate (Dipturus Laevis) Jaw Prep, Nathan P. Andrews, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw Prep from Barndoor Skate (Dipturis laevis)

Journey Into Midnight: Population Dynamics, Vertical Distribution, And Trophic Ecology Of Whalefishes (Cetomimidae) In The Bathypelagic Gulf Of Mexico, Rachel Eckley

All HCAS Student Capstones, Theses, and Dissertations

Despite comprising the largest biome on Earth, the bathypelagic zone inhabitants represent a “black hole” in the understanding of deep-oceanic functioning due to physical and monetary limitations. The characteristics of the global bathypelagic realm create a limiting environment only inhabitable by specially adapted fauna. These include whalefishes (Stephanoberycoidei: Cetomimidae), which are a taxonomically and systematically challenging group of primarily bathypelagic fishes.

Cetomimids were collected in the Gulf of Mexico using high-speed rope trawls and a multiple-opening-and-closing net system. Population dynamics were described using morphometric analysis. Vertical distributions, including diel variation, were described using a modified boxplot of abundance standardized by …

Trophic Ecology And Functional Morphology Of The Scaleless Black Dragonfishes (Family Stomiidae; Subfamily Melanostomiinae), Ryan P. Mcgonagle

All HCAS Student Capstones, Theses, and Dissertations

Dragonfishes (Family Stomiidae) are considered the most numerically important and diverse taxon of higher-level meso- and bathypelagic predators in oceanic food webs, with the subfamily Melanostomiinae contributing 220 of the 317 species. The Stomiidae is also the most speciose fish family in the Gulf of Mexico. The relationship between diversity (both systematic and morphological) and feeding of the Melanostomiinae has not been previously examined due to sample size limitation. Here the diet and morphology of 16 species of dragonfishes in the Gulf of Mexico was examined to address the question, “Does the extraordinary speciation in this most-diverse deep-pelagic fish clade …

Historical Ecology Of The San Diego Sport Fishery: Catch Composition, Species Trends, And Fishing Effort From 1959 To 2011, Rebecca Schwartz Lesberg

Theses

Like ocean systems around the world, species targeted by the San Diego sportfishery are subject to myriad threats from human activity, with several species already showing documented decline. However, long-term fisheries datasets are often lacking, limiting natural resource managers’ ability to appropriately manage these ecologically and economically important species. Therefore, this study used daily reports published in two Southern California newspapers to examine changes in catch composition, effort, and catch per unit effort (CPUE) from 1959-2011 for the San Diego commercial passenger fishing vessel (CPFV) sportfishery. This study then tested the relationship between those patterns and three large scale oceanographic …

[Squalus Acanthus (Spiny Dogfish Shark)]Jaw, Ally E. Sheehan

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from Female, [length] 6cm, [width] 5.5 cm [Squalus acanthias (Sping Dogfish shark)]

Spiny Dogfish (Squalus Acanthias) Jaw Prep, Olivia Williams, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from female spiny dogfish (Squalus acanthias)

Spiny Dogfish (Squalus Acanthias) Jaw, Jordan Warren, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from approximately 1 m total length Spiny Dogfish (Squalus acanthias).

Spiny Dogfish (Squalus Acanthias) Jaw Prep, Matthew B. Edwards, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from Spiny Dogfish (Squalus acanthias)

Male Longnose Skate (Raja Rhina) Jaw, James A. Moss, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Male Longnose Skate Jaw (Raja rhina). Provided by Dr. David Kerstetter.

Barndoor Skate (Dipturus Laevis) Jaw, Erika M. Carrera, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from 14.4 cm total length (TL) Barndoor skate (Dipturus laevis), collected from Massachusetts on an unknown date by Jeff Kneebone

Barndoor Skate (Dipturus Laevis) Jaw Prep, Chase Adam Dejarnett, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Barndoor skate (Dipturus laevis) jaw preparation done by Chase DeJarnett and David Kerstetter for the Sharks and Their Relatives course Winter Semester 2021.

Squalus Acanthias, Spiny Dogfish Shark, Jaw, Sam Snell, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from Squalus acanthias, Spiny Dogfish Shark