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2019

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Articles 181 - 210 of 297

Full-Text Articles in Marine Biology

Comparing Feeding Accuracy Between High And Low Predation Trinidad Guppies, Lydia J. Bonnell Apr 2019

Comparing Feeding Accuracy Between High And Low Predation Trinidad Guppies, Lydia J. Bonnell

Honors College Theses

Efficient feeding accuracy could increase an organism’s survival. Although local adaptation in Trinidad guppies is common, the effects on accuracy are unknown. Guppies were wild caught in 2015 and 2017, filmed while capturing prey. Accuracy wasn’t different within samples but differed across samples, possibly due to the prey types used.

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Hepatic Polycyclic Aromatic Hydrocarbons (Pahs) In Gulf And Southern Hake Collected Aboard Multiple R/V Weatherbird Ii Cruises In The Gulf Of Mexico From 2012-08-21 To 2015-09-24, Erin Pulster, Steven A. Murawski, Rachel Struch Apr 2019

Hepatic Polycyclic Aromatic Hydrocarbons (Pahs) In Gulf And Southern Hake Collected Aboard Multiple R/V Weatherbird Ii Cruises In The Gulf Of Mexico From 2012-08-21 To 2015-09-24, Erin Pulster, Steven A. Murawski, Rachel Struch

C-IMAGE data

This dataset contains hepatic polycyclic aromatic hydrocarbons (PAHs) in Gulf and Southern Hake collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-21 to 2015-09-24. PAH was extracted from liver samples using a modified QuEChERS (Bond Elut, Agilent Technologies, Santa Clara, CA, USA) method optimized specifically for these study species. Extracts were analyzed using Agilent’s 7890B gas chromatograph (GC) coupled to a 7010 tandem mass spectrometer (MS/MS) operating in multiple reactions mode (MRM). The dataset contains the location, date, biometrics, and the total concentration of polycyclic aromatic hydrocarbon (PAHs) in livers. The cruise documentation was provided …

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In Situ Observations Of Fish Larvae Encased Within A Pelagic Gelatinous Matrix, Adam T. Greer, Luciano M. Chiaverano, James G. Ditty, Frank J. Hernandez Apr 2019

In Situ Observations Of Fish Larvae Encased Within A Pelagic Gelatinous Matrix, Adam T. Greer, Luciano M. Chiaverano, James G. Ditty, Frank J. Hernandez

Faculty Publications

The degree to which marine fish larvae aggregate (i.e. patchiness) is predominantly determined by the physical oceanographic environment. Biological traits, however, can also influence spatial distributions and have adaptive value for larvae (e.g. favorable transport or reducing predation mortality). Although several fish families are known to release eggs within a gelatinous matrix, hatched larvae have not been found inside this type of structure. We present observations of hatched, preflexion yolk-sac larvae encased within a pelagic gelatinous matrix (mass). Two different masses (40-60 mm in length) containing free swimming, elongate larvae were imaged in the northern Gulf of Mexico (nGOM) near …

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Density Of Hemigrapsus Sanguineus And Carcinus Maenas In Kettle Cove, Cape Elizabeth, Maine, Valerie Huston, Teresa Martel, Zimzim Mohamed Apr 2019

Density Of Hemigrapsus Sanguineus And Carcinus Maenas In Kettle Cove, Cape Elizabeth, Maine, Valerie Huston, Teresa Martel, Zimzim Mohamed

Thinking Matters Symposium Archive

Our focus for this project is to determine how the population densities of Hemigrapsus sanguineus, Asian shore crab and Carcinus maenas, European green crabs have shifted over a brief period of time. We are comparing data collected on September 17, 2018, to data collected on October 22, 2018. The location where the two sets of data were collected from is Kettle Cove, Cape Elizabeth, Maine. The GPS coordinance was 43°.33.55N70°.13.40N. We discuss what affects the influences of environmental factors such as temperature, salinity, high intertidal versus low intertidal, and percent ascophyllum cover affect have on the population densities of these …

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Quantifying Atlantic Sea Scallop (Placopecten Magellanicus) Larval Abundance Throughout Cape Elizabeth, Maine, Hannah Haskell, Britney Evangelista, Alex Loftis Apr 2019

Quantifying Atlantic Sea Scallop (Placopecten Magellanicus) Larval Abundance Throughout Cape Elizabeth, Maine, Hannah Haskell, Britney Evangelista, Alex Loftis

Thinking Matters Symposium Archive

As markets for the Atlantic Sea scallop are growing, the need for sustainable and reliable harvesting methods such as aquaculture is more imperative than ever. Due to the difficulty of maintaining sea scallop hatcheries, scallop farmers typically collect larvae from the ocean and raise them until a marketable size on lease sites. In order to efficiently collect scallop larvae, being able to predict when the larvae are most abundant in the water column is crucial. The goal of our research was to learn when scallop larvae are most abundant in the water column and to determine if there is a …

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Beach Composition Preferences For Nesting Populations Of Leatherback Sea Turtles (Dermochelys Coriacea), Armila Beach, Guna Yala Comarca, Scott Campbell Apr 2019

Beach Composition Preferences For Nesting Populations Of Leatherback Sea Turtles (Dermochelys Coriacea), Armila Beach, Guna Yala Comarca, Scott Campbell

Independent Study Project (ISP) Collection

Sea turtles play a critical role in marine ecosystems all over the world, including the Caribbean Sea. However, many sea turtle species are under threat due to anthropogenic impacts, such as habitat destruction and fisheries bycatch. This has caused significant declines in sea turtle populations around the world, which in turn has impacted marine ecosystems where sea turtles play critical roles in proper ecosystem functioning. A crucial part of the sea turtle life cycle that has been threatened by anthropogenic factors is nesting. Sea turtles rely on unspoiled beaches with particular physical characteristics for laying their eggs. One of the …

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Age And Growth Of Gray Triggerfish (Balistes Capriscus) From A North-Central Gulf Of Mexico Artifical Reef Zone, Amanda E. Jefferson, Robert J. Allman, Ashley E. Pacicco, James S. Franks, Frank J. Hernandez, Mark A. Albins, Sean P. Powers, Robert L. Shipp, J. Marcus Drymon Apr 2019

Age And Growth Of Gray Triggerfish (Balistes Capriscus) From A North-Central Gulf Of Mexico Artifical Reef Zone, Amanda E. Jefferson, Robert J. Allman, Ashley E. Pacicco, James S. Franks, Frank J. Hernandez, Mark A. Albins, Sean P. Powers, Robert L. Shipp, J. Marcus Drymon

Faculty Publications

The overexploitation of many traditionally targeted reef fishes such as red snapper (Lutjanus campechanus, Poey 1860), alongside the implementation of increasingly restrictive management measures on those species, has led to increased targeting of conventionally discarded Gulf of Mexico gray triggerfish (Balistes capriscus, Gmelin 1789) commercially and recreationally. The goal of this study was to assess age and growth of gray triggerfish from the Alabama Artificial Reef Zone in the north-central Gulf of Mexico. Gray triggerfish (n = 1135) were collected predominantly from artificial habitat during 1999 – 2017. Specimens were sexed macroscopically and ages were assigned …

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Upper Ocean Dynamics And Mixing In The Arabian Sea During Monsoons, Corinne Beverly Trott Apr 2019

Upper Ocean Dynamics And Mixing In The Arabian Sea During Monsoons, Corinne Beverly Trott

Theses and Dissertations

The Indian summer monsoon is a complex, nonlinear phenomenon involving atmospheric, oceanic, and land-based interactions from June through September. During this period, a strong low-level jet known as the Findlater Jet develops over the western Arabian Sea, advecting seasonally high quantities of warm, moist air to the Indian subcontinent, leading to the largest precipitation rates on the planet. The winds associated with the Findlater Jet seasonally strengthen the Arabian Sea eddy field, known for its intensity and variability. Comparison between the eddies in the western Arabian Sea during monsoon regimes of varying intensities revealed more high-amplitude eddies in strong (high-rainfall) …

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The House Of The Fish: Collaborative Coral Reef Awareness Project On Nosy Be, Meghan Hurley Apr 2019

The House Of The Fish: Collaborative Coral Reef Awareness Project On Nosy Be, Meghan Hurley

Independent Study Project (ISP) Collection

The purpose of this project was to initiate a place-based coral reef education project, with the ultimate goal of improved localized conservation efforts in the face of growing global threats. Three principal groups that interact with coral reefs on Nosy Be were interviewed: fishers, tourist guides, and conservationists. Research was conducted on the biology of coral reefs, and on the most prominent threats facing coral reefs in the Indian Ocean and around Nosy Be. Information and direct quotes from interviews, and the results of research, were incorporated into a photographic journal entitled "In the House of the Fish" or "An-tragno …

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Sponge Community Biocomplexity, Competition, And Functional Significance In Hard-Bottom Habitats Of The Florida Keys, Fl (Usa), Marla Maxine Valentine Apr 2019

Sponge Community Biocomplexity, Competition, And Functional Significance In Hard-Bottom Habitats Of The Florida Keys, Fl (Usa), Marla Maxine Valentine

Biological Sciences Theses & Dissertations

Sponges can have powerful effects on ecosystem processes in shallow, tropical marine ecosystems and are an integral component of the bentho-pelagic cycle of nutrients, via filtering of dissolved and particulate organic matter from the water column. The diversity of marine communities is thought to play a determining role in intensity of ecosystem processes; thus the loss of taxa alters community function and by extension ecosystem processes. Coastal sponge populations worldwide are increasingly exposed to declining water quality that in several regions has resulted in mass sponge mortalities and reduced sponge diversity. In the Florida Keys (Florida, USA), for example, frequent …

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The Impacts Of Episodic Floods, Droughts, Turbidites On Organic Carbon Burial Over The Past 2,000 Years In The Santa Barbara Basin, California, Caitlyn Sarno Apr 2019

The Impacts Of Episodic Floods, Droughts, Turbidites On Organic Carbon Burial Over The Past 2,000 Years In The Santa Barbara Basin, California, Caitlyn Sarno

Theses and Dissertations

Over the past several millennia, Southern California has experienced episodic climate that have influenced the magnitude and composition of terrestrial and marine material that ultimately reaches ocean sediments. Here, we analyze elemental concentrations, stable isotopes, and n-alkane lipids as tracers of terrestrial and marine sources in drought, turbidite, and flood horizons from a well-dated sediment core in the Santa Barbara Basin (SBB) that spans the last 2,000 years. Stable isotopes (δ13C and δ15N), indicate that more terrestrial organic carbon (OC) input occurred during floods relative to non-event periods, while bulk C/N ratios remained relatively constant (~10). Long chain n-alkanes, (C27, …

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Sex-Specific Growth And Reproductive Dynamics Of Red Drum In The Northern Gulf Of Mexico, Corbin F. Bennetts, Robert T. Leaf, Nancy J. Brown-Peterson Apr 2019

Sex-Specific Growth And Reproductive Dynamics Of Red Drum In The Northern Gulf Of Mexico, Corbin F. Bennetts, Robert T. Leaf, Nancy J. Brown-Peterson

Faculty Publications

The Red Drum Sciaenops ocellatus stock is heavily targeted in the Gulf of Mexico (GOM) by recreational fishers and supports a small commercial fishery in Mississippi. Despite their popularity, little recent work has been done to describe their life history. In this work, we describe sex‐specific growth and reproductive dynamics of Red Drum collected from the northern GOM from September 2016 through October 2017. We evaluated seven candidate growth models and found that the three‐parameter von Bertalanffy growth function (VBGF) was the best candidate length‐at‐age model. No significant difference in growth between sexes was observed with the three‐parameter VBGF, despite …

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Importance Of Weak Trophic Interactions In The Structure Of The Food Web In La Paz Bay, Southern Gulf Of California: A Topological Approach, Andrés F. Navia, Sergio R. Maciel-Zapata, Adrián F. González-Acosta, Robert T. Leaf, Victor H. Cruz-Escalona Apr 2019

Importance Of Weak Trophic Interactions In The Structure Of The Food Web In La Paz Bay, Southern Gulf Of California: A Topological Approach, Andrés F. Navia, Sergio R. Maciel-Zapata, Adrián F. González-Acosta, Robert T. Leaf, Victor H. Cruz-Escalona

Faculty Publications

Here, we describe the trophic structure of the La Paz Bay, Baja California Sur, Mexico, and evaluate the role of weak trophic interactions in the ecosystem using a suite of topological indices. We used information derived from published and unpublished stomach contents analysis studies from the region to construct an unweighted and directional trophic network (comprising 250 nodes and 1528 associated interactions) to assess the impact of predators in three scenarios. Each scenario simulated the removal of weak interactions corresponding to removal of those nodes with trophic contributions less than 5%, 10%, and 15%. In each removal scenario, the nodes …

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Dataset For: Ecotoxicological Benthic Impacts Of Experimental Oil-Contaminated Marine Snow Deposition, Justine S. Van Eenennaam, Melissa Rohal, Jagos R. Radovic, Thomas B. Oldenburg, Isabel Romero, Albertinka J. Murk, Edwin M. Foekema Mar 2019

Dataset For: Ecotoxicological Benthic Impacts Of Experimental Oil-Contaminated Marine Snow Deposition, Justine S. Van Eenennaam, Melissa Rohal, Jagos R. Radovic, Thomas B. Oldenburg, Isabel Romero, Albertinka J. Murk, Edwin M. Foekema

C-IMAGE data

This dataset contains experimental data on the effect of artificial marine snow on marine benthic invertebrates, water quality measurements, water nutrient measurements, oxygen measurements, and data on oil biodegradation (n-alkanes). Excel sheet with raw data from the experiment: exposure conditions, biota response, chemistry, and observations are included. This dataset supports the publication: van Eenennaam, J.S., Rohal, M., Montagna, P.A., Radović, J.R., Oldenburg, T.B., Romero, I.C., Murk, A.J. and Foekema, E.M. (2019). Ecotoxicological benthic impacts of experimental oil-contaminated marine snow deposition. Marine Pollution Bulletin, 141, 164-175. doi: 10.1016/j.marpolbul.2019.02.025

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Factors Contributing To The Success Of Restored Oyster Reefs In The Choptank River Of The Chesapeake Bay, Virginia, Tara L. Bardar Mar 2019

Factors Contributing To The Success Of Restored Oyster Reefs In The Choptank River Of The Chesapeake Bay, Virginia, Tara L. Bardar

HCNSO Student Capstones

Populations of Crassostrea virginica, the Eastern oyster, have been declining since the late 1800s. While overharvesting is the primary cause of decline, the Eastern oyster is also facing the threat of disease and habitat loss. As oyster populations decline, habitat suitable for oyster spats declines as well, as these prefer to settle on the shells of other oysters that have formed reefs. Knowing this, oyster restoration projects have been focused around testing methods that will increase recruitment of spat and allow oyster reefs to form. A current and ongoing restoration project in the Choptank River of the Chesapeake Bay, …

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The Coastal Ocean Circulation Influence On The 2018 West Florida Shelf K. Brevis Red Tide Bloom, Robert H. Weisburg, Yonggang Liu, Chad Lembke, Chuanmin M. Hu, Katherine Hubbard, Mathew Garrett Mar 2019

The Coastal Ocean Circulation Influence On The 2018 West Florida Shelf K. Brevis Red Tide Bloom, Robert H. Weisburg, Yonggang Liu, Chad Lembke, Chuanmin M. Hu, Katherine Hubbard, Mathew Garrett

Marine Science Faculty Publications

Blooms of the harmful alga, Karenia brevis on the west Florida continental shelf are thought to initiate offshore before manifesting as a nuisance along the coastline. Contributing to such blooms are a complex sequence of events occurring within oligotrophic waters, which in any given year may or may not be facilitated by the ocean circulation. Once initiation occurs, the delivery from the region of offshore origination to the region of coastline manifestation requires an upwelling circulation, whereby K. brevis cells are advected shoreward along the bottom. The 2018 K. brevis bloom was particularly intense owing to cells from the …

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Phytoene Accumulation In The Novel Microalga Chlorococcum Sp. Using The Pigment Synthesis Inhibitor Fluridone, Kelly Laje, Mark Seger, Barry Dungan, Peter Cooke, Juergen Polle, F. Omar Holguin Mar 2019

Phytoene Accumulation In The Novel Microalga Chlorococcum Sp. Using The Pigment Synthesis Inhibitor Fluridone, Kelly Laje, Mark Seger, Barry Dungan, Peter Cooke, Juergen Polle, F. Omar Holguin

Publications and Research

Carotenoids are lipophilic pigments found in plants and algae, as well as some bacteria, archaea, and fungi that serve two functions—(1) as light harvesting molecules—primary carotenoids, and (2) as antioxidants, acting against reactive oxygen species–secondary carotenoids. Because of their strong antioxidant properties, they are also valuable for the development of anti-aging and photo-protective cosmetic applications. Of particular interest is the carotenoid phytoene, for its colorless and UV absorption characteristics. In this study, we targeted a reduction of phytoene desaturase (PDS) activity with the pigment-inhibiting herbicide 1-methyl-3-phenyl-5-[3- (trifluoromethyl)phenyl]pyridin-4-one (fluridone), which leads to the over-accumulation of phytoene in the recently characterized microalgal …

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Hydrocarbon Concentration Data From Sediment Cores Collected Aboard R/V Justo Sierra Cruise Js-0815 In The Southern Gulf Of Mexico From 2015-07-31 To 2015-08-08, Isabel C. Romero Mar 2019

Hydrocarbon Concentration Data From Sediment Cores Collected Aboard R/V Justo Sierra Cruise Js-0815 In The Southern Gulf Of Mexico From 2015-07-31 To 2015-08-08, Isabel C. Romero

C-IMAGE data

This dataset consists of hydrocarbon measurements in sediment cores collected aboard R/V Justo Sierra cruise JS-0815 in the southern Gulf of Mexico from 2015-07-31 to 2015-08-08. The dataset contains the date, location and depth where the sediment cores were collected and the concentration of polycyclic aromatic hydrocarbon (PAHs) and biomarkers (hopanes, steranes, alkanes) analyzed at 5 mm intervals. The measurements were done following the method outlined in Romero et al., 2015 and using GC/MS/MS/MRM (gas chromatography with tandem mass spectrometry, operated in multiple reaction monitoring mode) on an Agilent 7680B gas chromatograph coupled with an Agilent 7010 triple quadrupole mass …

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Comments On Edgar Et Al. (2018) Paper For South-Western Australia, Daniel J. Gaughan, Nick Caputi, Brett W. Molony, Brent S. Wise, Gavin Begg, Stephen Mayfield, Michael Steer, Tim M. Ward, Adrian Linnane, Ben Stobart, Sean Sloan, Thor Saunders Mar 2019

Comments On Edgar Et Al. (2018) Paper For South-Western Australia, Daniel J. Gaughan, Nick Caputi, Brett W. Molony, Brent S. Wise, Gavin Begg, Stephen Mayfield, Michael Steer, Tim M. Ward, Adrian Linnane, Ben Stobart, Sean Sloan, Thor Saunders

Fisheries Research Articles

Edgar, Ward, and Stuart-Smith (2018) argue that Australian fishery stocks are suffering rapid declines and that to meet sustainability targets an expanded network of ‘no-fishing’ reserves is required. The three lines of evidence used were underwater visual surveys (UVSs), Australian catches, and one case study.

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Macroalgal Monitoring In The Great Bay Estuary: 2018 Annual Report, David M. Burdick, Gregg E. Moore, Arthur C. Mathieson, Andrew Payne, Chris Peter Mar 2019

Macroalgal Monitoring In The Great Bay Estuary: 2018 Annual Report, David M. Burdick, Gregg E. Moore, Arthur C. Mathieson, Andrew Payne, Chris Peter

PREP Reports & Publications

Since 2013, the abundance and taxa of intertidal macroalgae have been assessed at fixed locations throughout the Great Bay Estuary in New Hampshire. Algal abundance may be influenced by environmental conditions such as nutrient levels, water temperature, light and invasive species. Therefore, abundance of different algal groups can provide insights into the overall health of the estuary and signal ecological change. In 2018, intertidal abundance data for percentage cover and biomass were collected, as planned, from five of the eight sites. For the first time, subtidal sampling arrays were also incorporated at all four sites in Great Bay proper to …

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White Spot Syndrome Virus (Wssv) In Cultured Juvenile Blue Crabs Callinectes Sapidus: Oral Versus Injection Exposure, And Feeding Frequency Effects, Reginald B. Blaylock, Stephen S. Curran, Jeffrey M. Lotz Mar 2019

White Spot Syndrome Virus (Wssv) In Cultured Juvenile Blue Crabs Callinectes Sapidus: Oral Versus Injection Exposure, And Feeding Frequency Effects, Reginald B. Blaylock, Stephen S. Curran, Jeffrey M. Lotz

Faculty Publications

The efficacy of oral versus injection exposure and the effect of feeding frequency on the transmission of white spot syndrome virus (WSSV) in cultured juvenile blue crabs Callinectes sapidus were investigated. Crabs in Group 1 (G-1, n = 48) were exposed once orally to 100 mg of WSSV-infected shrimp tissue mg-1 of body weight (BW). The oral inoculum contained 2.6 × 109 WSSV genome copies mg-1 tissue. Group 2 (G-2, n = 46) received the same dosage once weekly for 5 wk. Group 3 (G-3, n = 12) was injected with 0.01 ml (2.6 × 107 …

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Population Dynamics And Demographics Of Spotted Seatrout, Cynoscion Nebulosus, Through Spatial Analysis: Towards An Integrative Management Approach, Ashley Melancon Baer Mar 2019

Population Dynamics And Demographics Of Spotted Seatrout, Cynoscion Nebulosus, Through Spatial Analysis: Towards An Integrative Management Approach, Ashley Melancon Baer

LSU Doctoral Dissertations

Spotted seatrout (Cynoscion nebulosus) is one of the most highly prized sportfish along the Gulf of Mexico coast, particularly in Louisiana. Although spotted seatrout are considered to be well managed and sustainably fished according to the state’s most recent stock assessment, the spatial ecology of this species is largely understudied in Louisiana waters. Acoustic telemetry is an innovative technology that is commonly used to assess the movements and behavior of aquatic species, and can be used as a tool to address the paucity of information on the spatial dynamics of spotted seatrout. The focus of this study was …

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Diving Behavior And Fine-Scale Kinematics Of Free-Ranging Risso's Dolphins Foraging In Shallow And Deep-Water Habitats, Patricia Arranz, Kelly J. Benoit-Bird Mar 2019

Diving Behavior And Fine-Scale Kinematics Of Free-Ranging Risso's Dolphins Foraging In Shallow And Deep-Water Habitats, Patricia Arranz, Kelly J. Benoit-Bird

University Faculty Publications and Creative Works

No abstract provided.

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Input, Output And Complete Run Files For The Atlantis Ecosystem Model Ixtoc Oil Spill Simulations From Campeche Bay Atlantis Model, Cameron Ainsworth Mar 2019

Input, Output And Complete Run Files For The Atlantis Ecosystem Model Ixtoc Oil Spill Simulations From Campeche Bay Atlantis Model, Cameron Ainsworth

C-IMAGE data

This dataset contains complete input, output, and executable model run files for Atlantis simulations of the Ixtoc-1 oil spill. The model outputs included describes simulations from 1979 to 2015; the spatial domain is the western and southern Gulf of Mexico. The data directory "SGoM_Atlantis_oil" contains the simulation with oil effect acting on fish and the directory "SGoM_Atlantis_nooil" contains a control simulation with no oil effect (no-spill scenario). This dataset supports the paper Ortega-Ortiz et al. (submitted manuscript, 2018).

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White Shark Genome Reveals Ancient Elasmobranch Adaptations Associated With Wound Healing And The Maintenance Of Genome Stability, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Minghui Wang, Qi Sun, Paulina D. Pavinski Bitar, Vincent P. Richards, Aleksey S. Komissarov, Mike Rayko, Sergey Kliver, Bryce J. Stanhope, Chuck Winkler, Stephen James O'Brien, Agostinho Antunes, Salvador Jorgensen, Mahmood S. Shivji Mar 2019

White Shark Genome Reveals Ancient Elasmobranch Adaptations Associated With Wound Healing And The Maintenance Of Genome Stability, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Minghui Wang, Qi Sun, Paulina D. Pavinski Bitar, Vincent P. Richards, Aleksey S. Komissarov, Mike Rayko, Sergey Kliver, Bryce J. Stanhope, Chuck Winkler, Stephen James O'Brien, Agostinho Antunes, Salvador Jorgensen, Mahmood S. Shivji

Biology Faculty Articles

The white shark (Carcharodon carcharias; Chondrichthyes, Elasmobranchii) is one of the most publicly recognized marine animals. Here we report the genome sequence of the white shark and comparative evolutionary genomic analyses to the chondrichthyans, whale shark (Elasmobranchii) and elephant shark (Holocephali), as well as various vertebrates. The 4.63-Gbp white shark genome contains 24,520 predicted genes, and has a repeat content of 58.5%. We provide evidence for a history of positive selection and gene-content enrichments regarding important genome stability-related genes and functional categories, particularly so for the two elasmobranchs. We hypothesize that the molecular adaptive emphasis on genome stability …

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An Interactive Application For Tracking The Movement Of The Limulus Polyphemus Throughout Long Island Sound (Lis), Ismael Youssef, Samah Senbel, Jennifer Mattei Mar 2019

An Interactive Application For Tracking The Movement Of The Limulus Polyphemus Throughout Long Island Sound (Lis), Ismael Youssef, Samah Senbel, Jennifer Mattei

Biology Faculty Publications

Poster presented at the Long Island Sound Research Conference held March 15, 2019 in Port Jefferson, New York.

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Petrocarbon Evolution: Ramped Pyrolysis/Oxidation And Isotopic Studies Of Contaminated Oil Sediments From The Deepwater Horizon Oil Spill In The Gulf Of Mexico, Kelsey L. Rogers, Samantha H. Bosman, Mary Lardie-Gaylord, Ann Mcnichol, Brad E. Rosenheim, Joseph P. Montoya, Jeffrey P. Chanton Feb 2019

Petrocarbon Evolution: Ramped Pyrolysis/Oxidation And Isotopic Studies Of Contaminated Oil Sediments From The Deepwater Horizon Oil Spill In The Gulf Of Mexico, Kelsey L. Rogers, Samantha H. Bosman, Mary Lardie-Gaylord, Ann Mcnichol, Brad E. Rosenheim, Joseph P. Montoya, Jeffrey P. Chanton

C-IMAGE Publications

Hydrocarbons released during the Deepwater Horizon (DWH) oil spill weathered due to exposure to oxygen, light, and microbes. During weathering, the hydrocarbons’ reactivity and lability was altered, but it remained identifiable as “petrocarbon” due to its retention of the distinctive isotope signatures (14C and 13C) of petroleum. Relative to the initial estimates of the quantity of oil-residue deposited in Gulf sediments based on 2010–2011 data, the overall coverage and quantity of the fossil carbon on the seafloor has been attenuated. To analyze recovery of oil contaminated deep-sea sediments in the northern Gulf of Mexico we tracked the …

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Short-Lived Radioisotope (Slrad) Data Collected Aboard R/V Justo Sierra Cruise Js-0815 In The Southern Gulf Of Mexico From 2015-07-31 To 2015-08-08, Gregg R. Brooks, Rebekka A. Larson Feb 2019

Short-Lived Radioisotope (Slrad) Data Collected Aboard R/V Justo Sierra Cruise Js-0815 In The Southern Gulf Of Mexico From 2015-07-31 To 2015-08-08, Gregg R. Brooks, Rebekka A. Larson

C-IMAGE data

This dataset contains short-lived radioisotope (SLRad) data collected aboard R/V Justo Sierra cruise JS-0815 in the southern Gulf of Mexico from 2015-07-31 to 2015-08-08. SLRad data were generated for selected core sub-samples at 2mm sampling intervals for “surficial unit” and 5mm sampling resolution intervals to the base of cores. SLRad data generated include sample activity as disintegrations per minute per gram (dpm/g) of 1) Excess Thorium-234 (234Thxs) activity, which is calculated by measuring the total Thorium-234 (234ThTot) activity and the subtraction of the measured or estimated “supported” Thorium-234 (234ThSup) activity, 2) Excess Lead-210 (210Pbxs) activity, which is calculated by measuring …

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Identifying Causes Of Temporal Changes In Acropora Cervicornis Populations And The Potential For Recovery, Elizabeth Goergen, Alison L. Moulding, Brian K. Walker, David S. Gilliam Feb 2019

Identifying Causes Of Temporal Changes In Acropora Cervicornis Populations And The Potential For Recovery, Elizabeth Goergen, Alison L. Moulding, Brian K. Walker, David S. Gilliam

Marine & Environmental Sciences Faculty Articles

Corals, specifically the Atlantic staghorn coral, Acropora cervicornis, are under major threat as disturbance events such as storms and disease and predation outbreaks increase in frequency. Since its population declines due to a wide spread disease event in the early 1980s, limited long-term monitoring studies describing the impact of current threats and potential recovery have been completed. The aim of this study was to document the impacts of environmental (tropical storms, increased wind) and biological (disease and predation) threats on A. cervicornis to further understand its population dynamics and potential for recovery. Two high-density A. cervicornis patches (greater than …

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Population Connectivity Of Pelagic Megafauna In The Cuba-Mexico-United States Triangle, Jay R. Rooker, Michael A. Dance, R.J. David Wells, Matthew J. Ajemian, Barbara A. Block, Michael R. Castleton, J. Marcus Drymon, Brett J. Falterman, James S. Franks, Neil Hammerschlag, Jill M. Hendon, Eric R. Hoffmayer, Richard T. Kraus, Jennifer A. Mckinney, David H. Secor, Gregory W. Stunz, John F. Walter Feb 2019

Population Connectivity Of Pelagic Megafauna In The Cuba-Mexico-United States Triangle, Jay R. Rooker, Michael A. Dance, R.J. David Wells, Matthew J. Ajemian, Barbara A. Block, Michael R. Castleton, J. Marcus Drymon, Brett J. Falterman, James S. Franks, Neil Hammerschlag, Jill M. Hendon, Eric R. Hoffmayer, Richard T. Kraus, Jennifer A. Mckinney, David H. Secor, Gregory W. Stunz, John F. Walter

Faculty Publications

The timing and extent of international crossings by billfishes, tunas, and sharks in the Cuba-Mexico-United States (U.S.) triangle was investigated using electronic tagging data from eight species that resulted in >22,000 tracking days. Transnational movements of these highly mobile marine predators were pronounced with varying levels of bi- or tri-national population connectivity displayed by each species. Billfishes and tunas moved throughout the Gulf of Mexico and all species investigated (blue marlin, white marlin, Atlantic bluefin tuna, yellowfin tuna) frequently crossed international boundaries and entered the territorial waters of Cuba and/or Mexico. Certain sharks (tiger shark, scalloped hammerhead) displayed prolonged periods …

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