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2012

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Articles 121 - 150 of 201

Full-Text Articles in Marine Biology

Enhancing Thermal Tolerance By Eliminating The Pejus Range: A Comparative Study With Three Decapod Crustaceans, Jennifer A. Jost, Stephanie M. Podolski, Markus Frederich Jan 2012

Enhancing Thermal Tolerance By Eliminating The Pejus Range: A Comparative Study With Three Decapod Crustaceans, Jennifer A. Jost, Stephanie M. Podolski, Markus Frederich

Marine Sciences Faculty Publications

Marine invertebrates in the intertidal and subtidal zones are often exposed to highly variable environmental conditions, especially rapid changes in temperature. The ability to survive at different temperatures has previously been described using an extended version of Shelford’s law of tolerance, with optimum, pejus (Latin: ‘turning worse’), and pessimum ranges, and the respective thresholds, critical (Tc) and pejus (Tp) temperatures, that mark the transition from one range into the next. The width of the pejus range, in which the scope for activity gradually declines, varies among species. We tested the hypothesis that the width of the …

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Increased Variability Of Microbial Communities In Restored Salt Marshes Nearly 30 Years After Tidal Flow Restoration, Anne E. Bernhard, David Marshall, Lazaros Yiannos Jan 2012

Increased Variability Of Microbial Communities In Restored Salt Marshes Nearly 30 Years After Tidal Flow Restoration, Anne E. Bernhard, David Marshall, Lazaros Yiannos

Biology Faculty Publications

We analyzed microbial diversity and community composition from four salt marsh sites that were impounded for 40–50 years and subsequently restored and four unimpounded sites in southeastern Connecticut over one growing season. Community composition and diversity were assessed by terminal restriction fragment length polymorphism (TRFLP) and sequence analysis of 16S ribosomal RNA (rRNA) genes. Our results indicated diverse communities, with sequences representing 14 different bacterial divisions. Proteobacteria, Bacteroidetes, and Planctomycetes dominated clone libraries from both restored and unimpounded sites. Multivariate analysis of the TRFLP data suggest significant site, sample date, and restoration status effects, but the exact causes of these …

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Out Of Sight, But Not Out Of Mind: A Look At Nanoparticles In The Marine Environment, Evan Ward, John J. Doyle Jan 2012

Out Of Sight, But Not Out Of Mind: A Look At Nanoparticles In The Marine Environment, Evan Ward, John J. Doyle

Wrack Lines

Nanoparticles exist in many products used by humans, such as sunscreens. medications, cosmetics, paints and electronics. But what is the effect of these tiny particles on the ocean or estuarine environment when the sunscreen washes off? This article looks at that question and at shellfish in particular. Evan Ward and John Doyle are marine scientists at UConn.

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Who's Afraid Of The Big Bad Cormorant?, Richard Jay King Jan 2012

Who's Afraid Of The Big Bad Cormorant?, Richard Jay King

Wrack Lines

How much do you really know about the cormorant? It's an amazing coastal bird, though not a very pretty one. Lately it has a bad rap as a destroyer of island ecosystems. This article talks about these avian creatures and their habits.

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Dredging And Shipping Impacts On Southeast Florida Coral Reefs, Brian K. Walker, David S. Gilliam, Richard E. Dodge, Joanna Walczak Jan 2012

Dredging And Shipping Impacts On Southeast Florida Coral Reefs, Brian K. Walker, David S. Gilliam, Richard E. Dodge, Joanna Walczak

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Many coastal regions have experienced extensive population growth during the last century. Commonly, this growth has led to port development and expansion as well as increased vessel activity which can have detrimental effects on coral reef ecosystems. In southeast Florida, three major ports built in the late 1920’s along 112 km of coastline occur in close proximity to a shallow coral reef ecosystem. Recent habitat mapping data were analyzed in GIS to quantify the type and area of coral reef habitats impacted by port and shipping activities. Impact areas were adjusted by impact severity: 100% of dredge and burial areas, …

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Diversity Of The Ohio River Bacterial Communities Using Next-Generation Sequencing Techniques, Emily Michele Anneken Jan 2012

Diversity Of The Ohio River Bacterial Communities Using Next-Generation Sequencing Techniques, Emily Michele Anneken

Theses, Dissertations and Capstones

The ability to sequence bacterial genetic material directly from environmental samples has unlocked the field of metagenomics. Next-generation sequencing techniques, such as pyrosequencing, have been instrumental in providing knowledge about bacterial communities. This study focused on identifying the bacterial diversity of the Ohio River via pyrosequencing and compared the diversity of cultivable bacteria versus the entire river community. To ensure the maximum number of cultivable bacteria was obtained, cultures were grown on nonselective media and incubated at river temperature. Bacterial DNA was extracted, sequenced, and classified. The dominant phyla for the Ohio River included Cyanobacteria (38-66% of the total), Actinobacteria …

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Orange Matters, Tom Raynor, Jay Cox, Eileen T. Jevis, Christine Yackel, Susan Parks Jan 2012

Orange Matters, Tom Raynor, Jay Cox, Eileen T. Jevis, Christine Yackel, Susan Parks

Syracuse University Magazine

No abstract provided.

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Deep-Sea Origin And In-Situ Diversification Of Chrysogorgiid Octocorals, Catherine S. Mcfadden, Eric Pante, Scott C. France, Arnaud Couloux, Corinne Cruaud, Sarah Samadi, Les Watling Jan 2012

Deep-Sea Origin And In-Situ Diversification Of Chrysogorgiid Octocorals, Catherine S. Mcfadden, Eric Pante, Scott C. France, Arnaud Couloux, Corinne Cruaud, Sarah Samadi, Les Watling

All HMC Faculty Publications and Research

The diversity, ubiquity and prevalence in deep waters of the octocoral family Chrysogorgiidae Verrill, 1883 make it noteworthy as a model system to study radiation and diversification in the deep sea. Here we provide the first comprehensive phylogenetic analysis of the Chrysogorgiidae, and compare phylogeny and depth distribution. Phylogenetic relationships among 10 of 14 currently-described Chrysogorgiidae genera were inferred based on mitochondrial (mtMutS, cox1) and nuclear (18S) markers. Bathymetric distribution was estimated from multiple sources, including museum records, a literature review, and our own sampling records (985 stations, 2345 specimens). Genetic analyses suggest that the Chrysogorgiidae as currently described is …

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Ecology Of Marine Bivalves: An Ecosystem Approach, Second Edition, Richard F. Dame Jan 2012

Ecology Of Marine Bivalves: An Ecosystem Approach, Second Edition, Richard F. Dame

CCU Faculty Books

Exploring the potential use of bivalves as indicators and monitors of ecosystem health, this book describes live and computer simulated experiments, mesocosm studies, and field manipulation experiments. This second edition discusses major new developments, including phase shifts in many coastal and estuarine ecosystems dominated by suspension-feeding bivalves, the invasion or introduction of alien bivalve species, the rapid growth of environmental restoration focused on bivalves, and the examination of geological history with regard to global climate change and its impact on bivalve-dominated systems.

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Preface In New Approaches To The Study Of Marine Mammals, Aldemaro Romero Jr. Jan 2012

Preface In New Approaches To The Study Of Marine Mammals, Aldemaro Romero Jr.

Publications and Research

No abstract provided.

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When Whales Became Mammals: The Scientific Journey Of Cetaceans From Fish To Mammals In The History Of Science, Aldemaro Romero Jr. Jan 2012

When Whales Became Mammals: The Scientific Journey Of Cetaceans From Fish To Mammals In The History Of Science, Aldemaro Romero Jr.

Publications and Research

No abstract provided.

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Despite Losing Its Mittens, A Chinese Mitten Crab Finds Its Way To Connecticut, Nancy C. Balcom Jan 2012

Despite Losing Its Mittens, A Chinese Mitten Crab Finds Its Way To Connecticut, Nancy C. Balcom

Wrack Lines

A new invasive species for Connecticut: the Chinese mitten crab. Only one of this invasive crustacean species was spotted, but there will be more on the way.

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Chronic Toxicity Testing In Mining Influenced Streams Of West Virginia, Leah J. Bitzer Jan 2012

Chronic Toxicity Testing In Mining Influenced Streams Of West Virginia, Leah J. Bitzer

Theses, Dissertations and Capstones

Whole effluent toxicity (WET) tests have become a common tool in the evaluation of effluent for discharge acceptability. In this study, four years of toxicity data from 119 sampling locations were analyzed to determine relationships with ions and conductivity as indicators of toxicity. West Virginia Stream Condition Index (WVSCI) scores were also examined to evaluate correlations between stream scores, conductivity, and IC25 endpoints from toxicity results. Conductivity was not an indicator of toxicity in the range of conductivities tested. Streams dominated by mining effluent sometimes exhibited toxicity to Ceriodaphnia dubia; however, toxicity was not found to be related to ionic …

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Winter 2012, Nsu Oceanographic Center Jan 2012

Winter 2012, Nsu Oceanographic Center

Currents

No abstract provided.

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Gametogenesis And Spawning Of Solenastrea Bournoni And Stephanocoenia Intersepta In Southeast Florida, Usa, Jenna R. Lueg, Alison L. Moulding, Vladimir N. Kosmynin, David S. Gilliam Jan 2012

Gametogenesis And Spawning Of Solenastrea Bournoni And Stephanocoenia Intersepta In Southeast Florida, Usa, Jenna R. Lueg, Alison L. Moulding, Vladimir N. Kosmynin, David S. Gilliam

Marine & Environmental Sciences Faculty Articles

This study constitutes the first report of the gametogenic cycle of the scleractinian corals Solenastrea bournoni and Stephanocoenia intersepta. Tissue samples were collected near Ft. Lauderdale, Florida, USA between July 2008 and November 2009 and processed for histological examination in an effort to determine reproductive mode and potential spawning times. Both S. bournoni and S. intersepta are gonochoric, broadcast spawning species. Gametogenesis of S. bournoni began in April or May while S. intersepta had a much longer oogenic cycle that began in December with spermatogenesis beginning in July. Though spawning was not observed in situ, spawning was inferred …

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Co-Cultures Of Pseudomonas Aeruginosa And Roseobacter Denitrificans Reveal Shifts In Gene Expression Levels Compared To Solo Cultures, Crystal A. Conway, Nwadiuto Esiobu, Jose V. Lopez Jan 2012

Co-Cultures Of Pseudomonas Aeruginosa And Roseobacter Denitrificans Reveal Shifts In Gene Expression Levels Compared To Solo Cultures, Crystal A. Conway, Nwadiuto Esiobu, Jose V. Lopez

Marine & Environmental Sciences Faculty Articles

Consistent biosynthesis of desired secondary metabolites (SMs) from pure microbial cultures is often unreliable. In a proof-ofprinciple study to induce SM gene expression and production, we describe mixed “co-culturing” conditions and monitoring of messages via quantitative real-time PCR (qPCR). Gene expression of model bacterial strains (Pseudomonas aeruginosa PAO1 and Roseobacter denitrificans Och114) was analyzed in pure solo and mixed cocultures to infer the effects of interspecies interactions on gene expression in vitro, Two P. aeruginosa genes (PhzH coding for portions of the phenazine antibiotic pathway leading to pyocyanin (PCN) and the RhdA gene for thiosulfate: cyanide sulfurtransferase …

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Characterizing And Determining The Extent Of Coral Reefs And Associated Resources In Southeast Florida Through The Acquisition Of High-Resolution Bathymetry And Benthic Habitat Mapping, Brian K. Walker, Amanda Costaregni, Ian Rodericks, Greg Lewis, Nick Gadbois Jan 2012

Characterizing And Determining The Extent Of Coral Reefs And Associated Resources In Southeast Florida Through The Acquisition Of High-Resolution Bathymetry And Benthic Habitat Mapping, Brian K. Walker, Amanda Costaregni, Ian Rodericks, Greg Lewis, Nick Gadbois

Marine & Environmental Sciences Faculty Reports

Effective marine resource management begins with knowing the distribution of resources within the region. Minimal data, and thus limited knowledge, exists about the reef resources of Martin County. The marine benthic habitats in Martin County need to be mapped to characterize and quantify the distribution of its coral and other benthic communities, therefore, the Florida Department of Environmental Protection – Coral Reef Conservation Program, FL Fish and Wildlife Research Institute and the National Coral Reef Institute at Nova Southeastern University have partnered to expand upon previous mapping efforts to identify and classify the benthic habitats in the southeast Florida region …

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Evaluation Of Rockfish Abundance In Untrawlable Habitat: Combining Acoustic And Complementary Sampling Tools, Darin Jones, Christopher D. Wilson, Alex De Robertis, Chris Rooper, Thomas C. Weber, John L. Butler Jan 2012

Evaluation Of Rockfish Abundance In Untrawlable Habitat: Combining Acoustic And Complementary Sampling Tools, Darin Jones, Christopher D. Wilson, Alex De Robertis, Chris Rooper, Thomas C. Weber, John L. Butler

Center for Coastal and Ocean Mapping

—Rockfishes (Sebastes spp.) are an important component of North Pacific marine ecosystems and commercial fisheries. Because the rocky, high-relief substrate that rockfishes often inhabit is inaccessible to standard survey trawls, population abundance assessments for many rockfish species are difficult. As part of a large study to classify substrate and compare complementary sampling tools, we investigated the feasibility of using an acoustic survey in conjunction with a lowered stereo-video camera, a remotely operated vehicle, and a modified bottom trawl to estimate rockfish biomass in untrawlable habitat. The Snakehead Bank south of Kodiak Island, Alaska, was surveyed repeatedly over 4 days and …

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An Evaluation Of Mississippi Barrier Islands As A Spawning And Nesting Habitat For The American Horseshoe Crab, Limulus Polyphemus, With Implications For Island Restoration, Richard Fulford, Rebecca A. Haehn Jan 2012

An Evaluation Of Mississippi Barrier Islands As A Spawning And Nesting Habitat For The American Horseshoe Crab, Limulus Polyphemus, With Implications For Island Restoration, Richard Fulford, Rebecca A. Haehn

Gulf and Caribbean Research

The American horseshoe crab (HSC), Limulus polyphemus, is an economically and ecologically important species in the coastal ecosystem. Horseshoe crabs inhabit the continental shelf and estuaries from Maine to the central Gulf Coast and the Yucatán Peninsula. Although the presence of horseshoe crabs in southern Mississippi is known locally, there are limited data specific to the area and population, particularly regarding spawning and nesting habitat. Surveys of HSC presence, habitat use, and behavior on Mississippi barrier islands were conducted between March and November 2007 to 2009. These data, combined with habitat surveys of the barrier islands, were used to …

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Multi-Partner Interactions In Corals In The Face Of Climate Change, Koty H. Sharp, Kim B. Ritchie Jan 2012

Multi-Partner Interactions In Corals In The Face Of Climate Change, Koty H. Sharp, Kim B. Ritchie

Arts & Sciences Faculty Publications

Recent research has explored the possibility that increased sea-surface temperatures and decreasing pH (ocean acidification) contribute to the ongoing decline of coral reef ecosystems. Within corals, a diverse microbiome exerts significant influence on biogeochemical and ecological processes, including food webs, organismal life cycles, and chemical and nutrient cycling. Microbes on coral reefs play a critical role in regulating larval recruitment, bacterial colonization, and pathogen abundance under ambient conditions, ultimately governing the overall resilience of coral reef systems. As a result, microbial processes may be involved in reef ecosystem-level responses to climate change. Developments of new molecular technologies, in addition to …

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Fall 2012, Nsu Oceanographic Center Jan 2012

Fall 2012, Nsu Oceanographic Center

Currents

No abstract provided.

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Biology Department Newsletter, No.2, Sacred Heart University Jan 2012

Biology Department Newsletter, No.2, Sacred Heart University

Biology Newsletter

No abstract provided.

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An Unbiased Approach To Identify Genes Involved In Development In A Turtle With Temperature-Dependent Sex Determination, Jena L. Chojnowski, Edward L. Braun Jan 2012

An Unbiased Approach To Identify Genes Involved In Development In A Turtle With Temperature-Dependent Sex Determination, Jena L. Chojnowski, Edward L. Braun

Natural Sciences Faculty Publications

Many reptiles exhibit temperature-dependent sex determination (TSD). The initial cue in TSD is incubation temperature, unlike genotypic sex determination (GSD) where it is determined by the presence of specific alleles (or genetic loci). We used patterns of gene expression to identify candidates for genes with a role in TSD and other developmental processes without making a priori assumptions about the identity of these genes (ortholog-based approach). We identified genes with sexually dimorphic mRNA accumulation during the temperature sensitive period of development in the Red-eared slider turtle (Trachemys scripta), a turtle with TSD. Genes with differential mRNA accumulation in response to …

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Molecular Mechanisms Regulating Chronological Aging And Cell Death In The Toxic Dinoflagellate, Karenia Brevis, Jillian Grace Johnson Jan 2012

Molecular Mechanisms Regulating Chronological Aging And Cell Death In The Toxic Dinoflagellate, Karenia Brevis, Jillian Grace Johnson

MUSC Theses and Dissertations

The toxic dinoflagellate, Karenia brevis, forms nearly annual blooms in the Gulf of Mexico that persist for many months in coastal waters, causing extensive marine animal mortalities and human health impacts. The molecular mechanisms that contribute to cell survival in high density, low growth blooms, and the mechanisms leading to often rapid bloom demise are not well understood. The studies presented in this dissertation investigate the existence and involvement of a programmed cell death-like (PCD-like) pathway in the demise of K. brevis cultures following oxidative stress and chronological aging. Firstly, to gain an understanding of the molecular processes that underlie …

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Determination Of The Spawning Season Of Bigmouth Sleeper In Puerto Rico By Examination Of Gonad Maturation And Reproductive Hormone Cycles, Nathan J. Harris, J. Wesley Neal, Todd D. Sink, Peter W. Perschbacher Jan 2012

Determination Of The Spawning Season Of Bigmouth Sleeper In Puerto Rico By Examination Of Gonad Maturation And Reproductive Hormone Cycles, Nathan J. Harris, J. Wesley Neal, Todd D. Sink, Peter W. Perschbacher

Gulf and Caribbean Research

Bigmouth sleepers, Gobiomorus dormitor, are diadromous fish that have potential for hatchery production as both food and sport fish and for conservation purposes. Understanding of bigmouth sleeper maturation and seasonal hormone cycling are necessary in order to realize hatchery production. Therefore, seasonal trends in gonadosomatic index (GSI) and plasma vitellogenin, estradiol, progesterone and total testosterone concentrations were examined in wild and captive populations in Puerto Rico during the presumed spawning season. The spawning season for wild river populations of bigmouth sleepers was protracted over several months, but peaks in male testosterone (6.5 ng/mL) and female vitellogenin (11.3 ng/mL), estradiol …

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Reproductive Biology And Recruitment Of Xiphopenaeus Kroyeri In A Marine Protected Area In The Western Atlantic: Implications For Resource Management, Ariádine C. Almeida, J. Antonio Baeza, Vivian Fransozo, Antonio L. Castilho, Adilson Fransozo Jan 2012

Reproductive Biology And Recruitment Of Xiphopenaeus Kroyeri In A Marine Protected Area In The Western Atlantic: Implications For Resource Management, Ariádine C. Almeida, J. Antonio Baeza, Vivian Fransozo, Antonio L. Castilho, Adilson Fransozo

Biological Sciences Faculty Publications

The potential of a recently established marine protected area (MPA) in the Western Atlantic, Brazil, as a 'seed production' and nursery ground for Xiphopenaeus kroyeri, an intensively exploited penaeid shrimp, was investigated in an attempt to reveal any future benefit of this new MPA to adjacent populations experiencing heavy exploitation. Overall, we observed that males and females >12 and 20 mm carapace length, respectively, contributed the most to reproduction in the studied population. Reproductive activity of X. kroyeri was continuous at the MPA; 2 annual reproductive peaks were recorded from March to April and from November to December, which were …

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Effects Of A Severe Cold Event On The Subtropical, Estuarine-Dependent Common Snook, Centropomus Undecimalis, Aaron J. Adams, Jessica E. Hill, Benjamin N. Kurth, Andrew B. Barbour Jan 2012

Effects Of A Severe Cold Event On The Subtropical, Estuarine-Dependent Common Snook, Centropomus Undecimalis, Aaron J. Adams, Jessica E. Hill, Benjamin N. Kurth, Andrew B. Barbour

Gulf and Caribbean Research

The effects of infrequent disturbance events on marine fishes are often difficult to determine, due largely to lack of sufficient pre- and post-disturbance event data. In January 2010, subtropical southwestern Florida (USA) experienced extreme cold for 13 days, which caused extensive mortality of many fish species. The effect of this severe cold event on common snook (Centropomus undecimalis), an economically important gamefish, was assessed using three years (2007-2009) of pre-event and one year (2010) of post-event data from a tag-recapture program conducted over 28 km of Gulf of Mexico barrier islands of Florida. All metrics pointed to a …

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Early Growth Of Three Kingfish (Menticirrhus) Species Found In Coastal Waters Of The Northern Gulf Of Mexico, E. John Anderson, Bruce H. Comyns, Harriet Perry, Chet F. Rakocinski Jan 2012

Early Growth Of Three Kingfish (Menticirrhus) Species Found In Coastal Waters Of The Northern Gulf Of Mexico, E. John Anderson, Bruce H. Comyns, Harriet Perry, Chet F. Rakocinski

Gulf and Caribbean Research

Southern kingfish (Menticirrhus americanus), gulf kingfish (M. littoralis), and northern kingfish (M. saxatilis) are members of the drum family (Sciaenidae) that are widespread in coastal habitats of the western Atlantic, including in the Gulf of Mexico (GOM). Despite their economic and ecological importance, little is known about growth of young kingfish. Young kingfish were collected from four different Mississippi shoreline habitats in 2005 and 2006; two associated with barrier islands and two along the mainland. Barrier island habitats included surf zones on the south shore and grass beds on the north shore. Mainland habitats …

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Flexible Feeding Strategies Of Juvenile Gray Triggerfish (Balistes Capriscus) And Planehead Filefish (Stephanolepis Hispidus) Within Sargassum Habitat, Sarah E. Ballard, Chet F. Rakocinski Jan 2012

Flexible Feeding Strategies Of Juvenile Gray Triggerfish (Balistes Capriscus) And Planehead Filefish (Stephanolepis Hispidus) Within Sargassum Habitat, Sarah E. Ballard, Chet F. Rakocinski

Gulf and Caribbean Research

Sargassum-associated juvenile gray triggerfish and planehead filefish exhibited flexible feeding strategies in terms of their use of epifauna or pelagic zooplankton. Four diet samples represented instances of co-occurrence and segregated occurrence. Co-occurring gray triggerfish had the most specialized diets consisting mainly of pelagic copepods and hyperiid amphipods. Conversely, segregated triggerfish as well as both co-occurring and segregated filefish had broader diets mainly consisting of Sargassum epifauna, such as bryozoans, portunid crabs, and hippolytid shrimp. Still, co-occurring planehead filefish also consumed somewhat more zooplankton than segregated planehead filefish. Ontogenetic diet transitions were not as distinct for gray triggerfish as for …

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A New Baseline For Diadema Antillarum, Echinometra Viridis, E. Lucunter, And Eucidaris Tribuloides Populations Within The Cayos Cochinos Mpa, Honduras, Paul A.X. Bologna, Lucy Webb-Wilson, Patrick Connelly, James E. Saunders Jan 2012

A New Baseline For Diadema Antillarum, Echinometra Viridis, E. Lucunter, And Eucidaris Tribuloides Populations Within The Cayos Cochinos Mpa, Honduras, Paul A.X. Bologna, Lucy Webb-Wilson, Patrick Connelly, James E. Saunders

Gulf and Caribbean Research

We investigated the density of 4 urchin species from 5 shallow reefs in the Cayos Cochinos Marine Protected Area in Honduras. Individual species density varied among reefs with total urchin density ranging from 3.2–7.9 individuals/m2. Echinometra viridis (Agassiz, 1863) was the numerically dominant species (2.29/m2) followed by E. lucunter (Linnaeus, 1758) (1.76/m2) with Eucidaris tribuloides (Lamarck 1816) representing the fewest individuals (0.42/m2). Our results indicated that density of Diadema antillarum (Philippi, 1845) differed significantly among reefs (0.4-1.3/m2, mean = 0.63/m2), but are three times greater than data collected …

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