Marine Biology Commons^™

Comparison Of Wetland Assessment Methods, Kerstin Green

HCNSO Student Theses and Dissertations

After many decades of being considered useless and often destroyed wetlands have become valued for the many functions they provide. To make informed wetland management decisions biologists have to develop practical, rapid, and inexpensive ways to assess biological conditions and functions. Ideally these assessment methods have to measure more than one attribute of the wetland to represent the overall condition of the biological community. For this project I conducted field assessments at mitigation sites in Pembroke Pines, Florida, to see how the newest method used in the State of Florida, the Uniform Mitigation Assessment Method (UMAM), compared to the older …

Seasonal Aggregations Of The Florida Manatee (Trichechus Manatus Latirostris) In The Port Everglades And Intracoastal Regions Of Fort Lauderdale, Florida., Jaime M. Goldman

HCNSO Student Theses and Dissertations

The Florida manatee (Trichechus manatus latirostris), a subspecies of the West Indian manatee, is one of the most endangered marine mammals in United States waters. The Florida manatee is the only manatee that ranges into subtropical and temperate regions. During the winter months manatees adopt a “refuging strategy” where they aggregate at warm-water sources immediately following decreases in the ambient water temperature to below 20° C (68° F) in order to avoid cold stress syndrome (CSS). During the winter manatees aggregate in warm water refuges, including natural warm water springs and the effluent discharges of power plants.

The …

Establishment Of An Acropora Cervicornis (Staghorn Coral) Nursery: An Evaluation Of Survivorship And Growth, Elizabeth Anne Larson

HCNSO Student Theses and Dissertations

This thesis is the first study to provide a detailed characterization of Acropora cervicornis transplants and donor colony survival on southeast Florida coral reefs. Since May 2006 this species has been listed as a threatened species under the Endangered Species Act. As populations continue to decline restoration efforts need to be evaluated to determine if there is an effort that could facilitate a population rebound. The overall goal of this project was to examine potential Acropora cervicornis restoration techniques along the entire Florida reef tract including Broward County, Miami Dade County, and Monroe County. For my thesis I used a …

Biological And Physical Analysis Of Currents And Water Masses Off The Coast Of Southeast Florida, Stephanie Healey

HCNSO Student Theses and Dissertations

Biological and physical sampling of a 10km long, east-west transect was performed during 2007, off the coast of southeast Florida. Temperature and salinity measurements were recorded using a conductivity-temperature-depth (CTD) sensor, and current direction and magnitude measurements were recorded using an acoustic Doppler current profiler (ADCP). Zooplankton samples were collected, during the daytime, using a Tucker multiple net mid-water trawl, with 760μm mesh, at intended depths of ~25m and ~200m, at three stations along the transect. Laboratory analysis indicated that several currents and water masses influenced the density distribution of calanoid copepods and chaetognaths. During April and September 2007, a …

Occurrence, Density, And Distribution Of The Larvae Of Three Commercially Important Crab Species In The Florida Current Off The Southeast Coast Of Florida, U.S., Gabriela L. Wisniewski

HCNSO Student Theses and Dissertations

Knowledge of the temporal and spatial distribution and density of the larvae of Florida‘s commercially important crab species, the blue crab, Callinectes sapidus, the golden crab, Chaceon fenneri, and the stone crab, Menippe mercenaria in the nearshore and offshore waters of Florida‘s southeast coast is minimal. Such data, however, can be crucial to our understanding of the population dynamics of these vital fishery species. To obtain baseline data of the occurrence and distribution of these species‘ larvae in the Florida Current, densities were obtained from zooplankton tows from an E-W transect northeast of Port Everglades, Ft. Lauderdale, Florida along …

A Comparison Of Copepoda (Order: Calanoida, Cyclopoida, Poecilostomatoida) Density In The Florida Current Off Fort Lauderdale, Florida, Jessica L. Bostock

HCNSO Student Theses and Dissertations

Copepods, minute crustaceans, are vital constituents of marine food web dynamics in tropical ecosystems. Ecologically, copepods provide the link between primary production and tertiary consumers. Changes in population structure and densities may impact ecosystem stability and production on small to large spatial scales. The present study examined the influence of the Florida Current on copepod population densities off the coast of Fort Lauderdale, Florida due to limited data in the area. Samples were collected during February and July 2007 at two locations, Stations A and B. Station A, dependent on current dynamics, fluctuated between the most western boundary and the …

Transplantation And Parrotfish Predation: A Study On Small Siderastrea Siderea Colonies Offshore Broward County, Fl Usa, Allison S. Brownlee

HCNSO Student Theses and Dissertations

With increasing coastal development along southeastern Florida, nearshore coral reef communities are at an increased risk from anthropogenic impacts. Impact minimization and mitigation efforts associated with permitted coastal construction activities generally exclude nearshore small (< 10 cm diameter) Siderastrea siderea colonies from required coral transplantation due to an assumed high colony mortality associated with transplanting small stony corals. This study evaluated the efficacy of transplanting these small colonies by monitoring survival, growth, and zooxanthellae density post transplantation to an offshore reef area. Unexpected observations of parrotfish predation on the newly transplanted corals were made within the first 24 hours. Within 2 weeks, 94% …

Investigations Into The Application Of Single-Beam Acoustic Backscatter For Describing Shallow Water Marine Habitats, Greg Foster

HCNSO Student Theses and Dissertations

Chapter 1

Producing thematic coral reef benthic habitat maps from single-beam acoustic backscatter has been hindered by uncertainties in interpreting the acoustic energy parameters E1 (~roughness) and E2 (~hardness), typically limiting such maps to sediment classification schemes. In this study acoustic interpretation was guided by high-resolution LIDAR (Light Detection And Ranging) bathymetry. Each acoustic record, acquired from a BioSonics DT-X echosounder and multiplexed 38 and 418 kHz transducers, was paired with a spatially-coincident value of a LIDAR-derived proxy for topographic complexity (Reef-Volume) and its membership to one of eight LIDAR-delineated benthic habitat classes. The discriminatory capabilities of the 38 and …

Applying A Molecular Genetics Approach To Shark Conservation And Management: Assessment Of Dna Barcoding In Hammerhead Sharks And Global Population Genetic Structuring In The Gray Reef Shark, Carcharhinus Amblyrhynchos., Rebekah L. Horn

HCNSO Student Theses and Dissertations

Chapter 1

DNA barcoding based on the mitochondrial cytochrome c oxidase subunit I (COI) gene sequence is emerging as a useful tool for identifying unknown, whole or partial organisms to species level. However, the application of only a single mitochondrial marker for robust species identification has also come under some criticism due to the possibility of erroneous identifications resulting from species hybridizations and/or the potential presence of nuclear-mitochondrial psuedogenes. The addition of a complementary nuclear DNA barcode has therefore been widely recommended to overcome these potential COI gene limitations, especially in wildlife law enforcement applications where greater confidence in the …

Study Of Secondary Metabolite Gene Expression In Marine Microbial Co-Cultures Using Quantitative Real-Time Pcr, Crystal A. Conway

HCNSO Student Theses and Dissertations

Interactions among microbial organisms often cannot be observed directly, but they can be inferred genetically using new molecular techniques. The analysis of secondary metabolite gene expression produced by co-cultured marine microbial species allows us to see how these organisms interact with one another when kept in the same environment. Co-cultures of three different strains of marine bacteria, P. aeruginosa PAO1, Roseobacter denitrificans OCH114, and Salinispora arenicola CNS-205 were grown in a laboratory setting, and using the Real-Time qPCR method gene expression levels of two different secondary metabolite producing genes from each organism was accessed across three time points. P. aeruginosa …

Diurnal Movements And Site Fidelity Of The Florida Manatee, Trichechus Manatus Latirostris, In Fort Lauderdale, Fl., Kym Walsh

HCNSO Student Theses and Dissertations

The diurnal movements of Florida manatees (Trichechus manatus latirostris) in warmwater refugia are poorly understood and these may prove critical in accurately estimating populations of these animals. Previous studies indicate that manatee populations in such refuges in Tampa Bay, FL, peak mid-day and decline towards evening when the animals leave to forage. This trend suggests that variation in the timing of aerial manatee population surveys may hamper accurate estimation of the true population size. Aerial survey counts are known to underestimate population size, yet the extent of the underestimation may be greater than expected. In this study data …

Seasonal And Salinity Effects On The Distribution Of Higher Filamentous Marine Fungi At Rookery Bay, Fl., Julia Ossler

HCNSO Student Theses and Dissertations

More than 500 species of higher marine fungi in over 300 genera have been described. Many marine fungi are highly specialized for marine environments relative to their terrestrial counterparts, having appendaged ascospores and conidia to aid in buoyancy, entrapment, and adherence to substrates. They have been reported to inhabit a wide variety of substrates including decaying wood, leaves, calcareous and chitinous substrates, seaweeds, and seagrasses. Most early studies on marine fungi were carried out in temperate regions. Investigations have now shifted to tropical locations in order to better evaluate the abundance and diversity of marine fungi on a global basis. …

Analyzing Spatial Patterns In Reefscape Ecology Via Remote Sensing, Benthic Habitat Mapping, And Morphometrics, Shanna K. Dunn

HCNSO Student Theses and Dissertations

A growing number of scientists are investigating applications of landscape ecology principles to marine studies, yet few coral reef scientists have examined spatial patterns across entire reefscapes with a holistic ecosystem-based view. This study was an effort to better understand reefscape ecology by quantitatively assessing spatial structures and habitat arrangements using remote sensing and geographic information systems (GIS).

Quantifying recurring patterns in reef systems has implications for improving the efficiency of mapping efforts and lowering costs associated with collecting field data and acquiring satellite imagery. If a representative example of a reef is mapped with high accuracy, the data derived …

Extraction And Analysis Of Coral Reef Core Samples From Broward County, Florida., Anastasios Stathakopoulos

HCNSO Student Theses and Dissertations

The reefs off Broward County exist as three shore-parallel, sequentially deeper terraces named the "inner", "middle", and "outer" reefs and also a shallower, nearshore ridge complex. These structures span the continental coast of southeast Florida from Palm Beach County to southern Miami-Dade County and were characterized as relict, early Holocene shelf-edge and mid-shelf reefs along with limestone ridges. Presently, the reefs are colonized by a fauna characteristic of West Atlantic/Caribbean reef systems. Scleractinian coral cover is low except for a few dense patches of Acropora cervicornis, while Acropora palmata is absent except for a few individual living colonies.

Coral …

Diet Composition Of Swordfish, Xiphias Gladius, Within The Straits Of Florida, Amy Marie Heemsoth

HCNSO Student Theses and Dissertations

A diet study of swordfish, Xiphias gladius, was conducted in the Straits of Florida from April 2007 to December 2008. The stomachs of 131 swordfish were analyzed. Thirteen species of teleosts, three species of cephalopods, and one species of crustacean were observed in the diet. Cephalopods dominated the swordfish diet by weight (73.38%), number (69.90%), and occurrence (80.91%) and ranked highest in importance in the diet when calculating the index of relative importance (IRI). Teleosts followed by weight (25.16%), number (26.34%), occurrence (68.18%), and IRI (3,510.97). The prey species with the greatest dietary importance was Illex sp followed by …

Segregation Of Palaemonid Shrimp Along The Shark River Estuary: Implications For Trophic Function, Lauren C. Mccarthy

HCNSO Student Theses and Dissertations

This study examined the abundance, distribution, and spatiotemporal variation of palaemonid shrimp species in relation to season and salinity in the Shark River Estuary, Everglades National Park (ENP), Florida, USA. Five palaemonid species occurred in the samples: Palaemonetes paludosus, P. pugio, P. intermedius, Palaemon floridanus, and Leander paulensis; L. paulensis was collected only during the wet season. Overall, shrimp catches in traps doubled in the dry season. Catches in the upper estuary were dominated by P. paludosus, particularly in the wet season, while catch per unit effort (CPUE) at the most downstream, …

An Analysis Of Policies And Conservation Techniques To Reduce The Accidental Deaths Of Sea Turtle Hatchlings Due To Light Pollution In Broward County, Fl., Megan Wilson

HCNSO Student Theses and Dissertations

Light pollution is any excessive or obtrusive man made light source which disrupts the natural environment. Hatchling marine turtles are adversely affected by light pollution and therefore unlit nesting beaches are essential habitats for all marine turtle species. In Broward County, the most significant conservation issue facing nesting and hatchling marine turtles is the amount of light pollution present on urban sea turtle nesting beaches. The reduction of hatchling mortality from light pollution is an ongoing conservation goal of the State of Florida, Broward County, and the Broward County Sea Turtle Conservation Project (BCSTCP). Conservation techniques and policies intended to …

The Influence Of Artificial Reef Associated Fish Assemblages And Varying Substrates On Coral Recruitment, T. Patrick Quinn

HCNSO Student Theses and Dissertations

This study examined enhancing coral recruitment to artificial substrate by manipulating fish assemblages and the use of coral attractant substrates. One hundred sixty artificial reef modules were organized into 40 four-module replicate configurations (quads) of varying complexity to induce different fish assemblages. The deployment array consisted of the 40 quads, each in a square configuration with three to four-meter sides (approximately 1 m separation between modules) measured from the outside corners. The quads were divided into four fill treatments of differing complexity: Empty, Small, Mixed, and Large. Each quad had four potential coral attractant treatments on settlement plates: CaCO3, iron, …

A Comparison Of Scleractinian Coral Abundance Between Natural And Artificial Substrata In A High-Latitude Environment Off Broward County, Florida, Usa, Deron James Bauer

HCNSO Student Theses and Dissertations

The Dania Beach Erojacks Artificial Reef was deployed off the coast of Broward County, Florida on December 31, 1967 as a way to help combat beach erosion. Over the last forty years, the linear pile of concrete hexapods has become an important habitat, for scleractinian corals, octocorals, algae, crustaceans, mollusks, and fish. This study focuses on the density and size of the scleractinian corals found on this artificial reef and how it compares to that of the nearby natural reef. In addition, the impact of two hurricanes on the shallow portion of the artificial reef was documented. In the 2-year …

An Analysis Of Dwarf And Pygmy Sperm Whale (Kogia Sp.) Stranding Data In The Southeast United States, Nicole M. O'Brien

HCNSO Student Theses and Dissertations

Pygmy sperm whales (Kogia breviceps) and dwarf sperm whales (Kogia sima) strand frequently in the southeastern United States (SEUS). To detect seasonal trends in Kogia sp. strandings across the SEUS, all 979 stranding events from 1977 through 2005 were segregated by month. A peak in strandings occurred in the late summer and early fall (July – October). The entire SEUS was divided into segments of similar coastline orientation, 1) North and South Carolina, 2) Georgia and the east coast of Florida, 3) Florida Keys, 4) west coast of Florida, 5) Florida panhandle, Alabama and Mississippi, 6) …

The Colonial Zoanthid Palythoa Caribaeorum: Population Dynamics On Southeast Florida Reefs, Joanna C. Walczak

HCNSO Student Theses and Dissertations

The colonial zoanthid Palythoa caribaeorum (Cnidaria, Zoanthidea) (Duchassaing and Michelotti 1861) is a major benthic component of most Caribbean reefs and is an extremely aggressive spatial competitor (Suchanek and Green 1981). This study looks at annual visits to 16 permanent monitoring sites over 3 reef designations (Inshore Ridge Complex, Middle Reef, and Outer Reef) in Broward County, Florida from 2002-2006. The data obtained in this study fills an informational void regarding the role of zoanthids in the southeast Florida reef benthic community. The study was conducted in two parts. Part One used digital imagery analysis to quantify the spatial cover …

Histopathological Assessment And Comparison Sedimentation And Phosphate Stress On The Staghorn Coral, Acropora Cervicornis, Erin Christine Hodel

HCNSO Student Theses and Dissertations

Traditional coral reef monitoring efforts lack assessment of coral health at tissue and cellular levels. This thesis investigated tissue, cellular, and gross morphological responses of the Caribbean staghorn coral, Acropora cervicornis, to elevated sedimentation and phosphate using state-of-the-art histological techniques. Branch fragments of A. cervicornis were collected offshore Broward County, FL, acclimated for 12 weeks, subjected to a 4-week experimental period, and given a 1-week recovery period in laboratory aquaria. Treatments consisted of high doses (200 mg cm^-2 day^-1) of sedimentation (S), phosphate (4 μM) (P), and a combination of these two (S + P), in …

Surface Associated Amoebae On The Ctenophore, Mnemiopsis Sp., Connie S. Versteeg

HCNSO Student Theses and Dissertations

Previous work by Moss et al. (2001) reported surface associated protists on the ctenophore Mnemiopsis sp. They frequently observed the ciliate Trichodina ctenophorii and a Flabellula-like amoeba attached to the comb plate surface. They noted that the ciliate and the amoeba were found on the subsagittal, subtentacular, and the auricular comb plates. The amoeba had a maximum width of about 15 μm and cells were crescent shaped. Ultrastructural evidence suggested that these protists were parasites although the exact nature of the association remained to be determined. This was the background for the present study.

The present investigation documented the …

Comparison Of Fish Assemblages Between Mitigation Boulder Reef And Neighboring Natural Hardbottom In Broward County, Florida, Usa, Jessica A. Freeman

HCNSO Student Theses and Dissertations

A beach renourishment project was initiated in May 2005 and completed in February 2006 to restore 11.1 km of shoreline in Broward County, Florida, USA. For mitigation of predicted nearshore hardbottom burial, a boulder reef totaling 3.6 ha was deployed in 2003. To examine the replacement value of the mitigation relative to fishes, this study compared fish assemblages on boulder reef to those on adjacent natural hardbottom. Twenty-five natural hardbottom sites and twenty-five boulder reef sites were surveyed six times between March 2005 and August 2007. Two non-destructive visual census methods, a transect count (30 m long x 2 m …

Patterns Of Scleractinian Health In Broward County, Florida, Melody J. White

HCNSO Student Theses and Dissertations

This study was survey of disease distribution and abundance relating to coral diseases present in Broward County. Data of the 1330 scleractinian coral individuals found, 88 showed signs of disease. 19 coral species, 3 diseases and bleaching were represented. Diseases affected 9 of the species. Bleaching was the most common disease noted in this survey, followed by dark spot, red band, and yellow band.

Disease distribution appears to be scattered on the reef system. No apparent patterns were found when grouped by reef or corridor locations. MDS cluster analysis revealed a clumping of disease, but this was not correlated with …

Testing The Effectiveness Of Pollution Control Measures At The South Dade Landfill: The Reduction Of Un-Ionized Ammonia In Landfill Leachate, Matt Mitchell

HCNSO Student Theses and Dissertations

The purpose of this research was to evaluate the overall effectiveness of the pollution control measures in place at the South Dade Landfill, located in Miami, Florida. Pollution control measures in place at the landfill include the lining and capping of landfill cells, a landfill wetland retention basin and a groundwater remediation interceptor trench (GWRIT). This study was performed over a ten (10) month span beginning in October, 2002 and ending in July, 2003. This study dealt specifically with the effectiveness of the GWRIT and landfill wetlands in reducing the amount of un-ionized ammonia (NH₃) in the landfill …

Effects Associated With Dredging For Beach Renourishments On Reef Fish Communities Offshore Of Miami-Dade County, Florida:, Christian L. Avila

HCNSO Student Theses and Dissertations

Beach erosion is an ongoing problem in South Florida. Beach replenishment has been the primary means of maintaining these economically important beaches, and dredging offshore sand deposits, adjacent to reef tracts, has been the pervasive method since the 1970's. Over the past ten years, greater attention has been paid to potential impacts dredging can have on adjacent reef communities, which has led to increased monitoring efforts. With the increase in monitoring efforts, scope has expanded from a strict focus on the benthic community to include the fish communities. This study evaluates the effects of dredging on reef fish communities associated …

The Influence Of Supplemental Feeding On The Movement Patterns Of The Southern Stingray, Dasyatis Americana, At Grand Cayman, Cayman Islands, Mark John Corcoran

HCNSO Student Theses and Dissertations

There are currently over 300 sites in nearly 40 countries where a variety of marine animals are provided supplemental food by humans. The influence of this supplemental feeding on the behavior, physiology, growth, reproduction and movements of the animals involved is seldom known. Intentional supplemental feeding of the southern stingray, Dasyatis americana, has occurred at Stingray City (SC) and Stingray City Sandbar (SCS) at Grand Cayman since 1986. There are no specific regulations governing the feeding of D. americana at Grand Cayman, and neither the species nor the feeding sites are afforded any official protective status. This study investigated …

Highly Streamlined Pcr-Based Genetic Identification Of Carcharhinid Sharks (Family Carcharhinidae) For Use In Wildlife Forensics, Trade Monitoring, And Delineation Of Species Distributions, Marcy Henning

HCNSO Student Theses and Dissertations

An increase in worldwide industrialized shark fisheries resulting from the growing demand for shark products, especially shark fins in Asian markets, as well as high levels of bycatch mortality associated with multi-species fisheries have raised suspicions of substantial declines in global shark populations. Due to varying responses by individual species to fishing pressure, it has become necessary to manage sharks on a species-specific basis, which requires the collection of more accurate catch and trade data. The accumulation of such data is hindered, however, by difficulties in identifying species from only landed carcasses, body parts, or fins. This is especially true …

Cultivation Of Wrack Collected Seagrasses, Irene Arpayoglou

HCNSO Student Theses and Dissertations

No abstract provided.