Marine Biology Commons^™

Cross-Shelf And Latitudinal Benthic Community Investigation In The Nearshore Habitats Of The Northern Florida Reef Tract, Katelyn Klug

HCNSO Student Theses and Dissertations

The Florida Reef Tract (FRT) extends from the tropical Caribbean northward along the Florida coast into a warm temperate environment where tropical reef communities diminish with increasing latitude. This study was designed to map the nearshore benthic habitats including coral reefs and evaluate how the benthic communities differ between habitats and along the coast.

Benthic communities across the northern FRT from Key Biscayne to Hillsboro Inlet (25.5°-26.3° N) were digitized from aerial photography taken in 2013 at a 1:1,000 scale. Three main hard-bottom habitat types were identified that ran parallel to shore and consecutively further away from shore: Colonized Pavement, …

A Revision Of The Genera Of Charitometridae With Abruptly Expanded Genital Pinnules, Alois Romanowski

HCNSO Student Theses and Dissertations

Feather star (Echinodermata: Crinoidea: Comatulida) family Charitometridae has not been revised since 1950. Molecular analysis, new specimens of existing species, and the discovery of a new species has revealed the need for a generic-level revision of those genera that exhibit abruptly expanded genital pinnules. A morphological study was conducted using 57 specimens representing 10 species of the Charitometridae. The genus Poecilometra is redescribed, and two species formerly placed in Strotometra have been moved to the genus based primarily on possession of pedunculate genital pinnules and a wide flange on the first pinnular of the proximal pinnules. A new species was …

Thermal Preferences And Critical Temperature Regimes Of The Western North Atlantic Invasive Lionfish Complex (Pterois Spp.), Benjamin Barker

HCNSO Student Theses and Dissertations

Temperature preference, behavioral tolerance, and physiological tolerances were determined for locally captured, invasive juvenile lionfish at four different acclimation temperatures (13°C, 20°C, 25 °C and 32°C). Temperature preferences and avoidance temperatures were evaluated using an automated shuttlebox system that presents subject-driven temperature stimuli to subjects, who control the temperature with their movement throughout the tank for 12 hours. Subjects are tracked by a computer system, with data output approximately every second. Acute preference was calculated from the archived data as the mean temperature that the fish occupied during the first two hours of dynamic experimentation. Acute preference measurements were used …

Modeling Of Epizootics On Four Genera Of Arabian Gulf Corals, John Alexander Kluge

HCNSO Student Theses and Dissertations

Coral colonies, from a reef near Abu Dhabi, United Arab Emirates (UAE), were counted and assessed for condition using photo-transects. An epidemic model, used to track how a communicable disease moves through a population, was constructed to help predict the future condition of this coral reef. In situ data from a disease outbreak that occurred in September 2011 provided a baseline for the model. Coral Populations of Porites, Platygyra, Acropora and Dipsastrea were modelled using condition categories that included Healthy, Black Band Disease Infected, Cyanobacteria Infected, Recovered, Recruits or Dead. Results from the modelling indicate that populations of Platygyra and …

Dna Analysis Of Surfactant Associated Bacteria In The Sea Surface Microlayer In Application To Satellite Remote Sensing Techniques: Case Studies In The Straits Of Florida And The Gulf Of Mexico, Bryan Hamilton

HCNSO Student Theses and Dissertations

Several genera of bacteria residing in the sea surface microlayer and in the near-surface layer of the ocean have been found to be involved in the production and decay of surfactants. Under low wind speed conditions, surfactants can suppress short gravity capillary waves at the sea surface and form natural sea slicks. These features can be observed with both airborne and satellite-based synthetic aperture radar (SAR). Using a new microlayer sampling method, a series of experiments have been conducted in the Straits of Florida and the Gulf of Mexico in 2013 to establish a connection between the presence of surfactant-associated …

Acute And Chronic Effects Of Large-Vessel Anchoring On Coral Reef Communities Inside A Designated Commercial Anchorage, Lauren Waters

HCNSO Student Theses and Dissertations

Coral reefs provide economic and environmental services to millions of people as areas for recreation, sources of food, jobs, and shoreline protection; and are now under threat from multiple stresses (NOAA 2002). Anthropogenic impact from acute physical events such as commercial vessel grounding and anchor drags have been well documented throughout the world and southeast Florida. However little data exist on the chronic effects of large commercial vessels anchoring on reef resources. The Port Miami commercial anchorage was designated circa 1927 and was delineated over approximately 700 acres of reef resources. Anchorage use, benthic resources, and substrate composition were surveyed …

Estimating Growth And Mortality In Elasmobranchs: Are We Doing It Correctly?, Brian J. Moe

HCNSO Student Theses and Dissertations

The instantaneous mortality rate (M) is an important parameter in elasmobranch management and conservation, but is difficult to estimate directly. Thus, indirect estimates based on relatively easily obtained life history parameters are commonly used. Many indirect methods incorporate one or more parameters from the von Bertalanffy growth model (VBGM), which is often criticized for its inability to describe changes in growth associated with maturity. The Lester growth model (LGM) is a biphasic alternative to the VBGM that incorporates trade-offs between reproduction, growth, and survival, and may therefore more accurately estimate M. I used published data from 29 …

Seasonal Warm-Water Refuge And Sanctuary Usage By The Florida Manatee (Trichechus Manatus Latirostris) In Kings Bay, Citrus County, Florida, Danielle C. Sattelberger

HCNSO Student Theses and Dissertations

The largest Florida manatee (Trichechus manatus latirostris) aggregation at a natural warm-water refuge occurs in Kings Bay, Crystal River, FL. Over the last 32 years, the U.S. Fish and Wildlife Service and the State of Florida have created a network of manatee protection areas within Kings Bay including a year-round refuge designation and seven Federal manatee sanctuaries during the winter manatee season (November 15 – March 31). Aerial survey data collected between 1983 and 2012 was used to examine the seasonal change in manatee distribution within Kings Bay in order to assess the effectiveness of current sanctuary sizes …

Evaluation Of Endocrine Disrupting Chemicals In The Florida Coastal Pelagic Fish Complex Following The Deepwater Horizon Oil Spill Event, Rachel Hickey

HCNSO Student Theses and Dissertations

Following the BP Deepwater Horizon oil spill event, there was a critical need to assess the effects of the oil and dispersant chemicals on the coastal pelagic fish complex in the Gulf of Mexico and the Florida Straits. The objective of this study was to determine if spilled crude oil and dispersant chemicals have posed an ecological risk to the coastal pelagic fish complex through the detection of vitellogenesis. Crude oil containing polycyclic aromatic hydrocarbons (PAHs), dispersant chemicals and other estrogen-mimicking compounds are suspected to induce vitellogenin production in male and immature female fish, normally only produced by sexually mature …

Land-Based Coral Nurseries: A Valuable Tool For Production And Transplantation Of Acropora Cervicornis, Keri L. O'Neil

HCNSO Student Theses and Dissertations

Coral nurseries have become a popular and successful method to produce coral fragments for reef-restocking and restoration projects worldwide. Numerous in-situ coral nurseries have been established and many studies have focused on the most effective way to produce coral fragments in offshore nurseries. In contrast, production of coral fragments in land-based nurseries is rarely studied despite a growing knowledge of coral husbandry and coral aquaculture. Little data exist on the success of tank-raised corals when transplanted back into reef environments. This thesis presents the results of a study designed to assess the use of land-based coral nurseries in production of …

Histology And Ultrastructure Of Montastraea Cavernosa And Porites Astreiodes During Regeneration And Recruitment: Anthropogenic Stressors And Transplant Success, Dorothy-Ellen A. Renegar

HCNSO Student Theses and Dissertations

Corals combine photosynthesis and calcification in an intricate and delicately balanced relationship to form large biomineralized structures that are dominant features of tropical coastlines worldwide. Coral reefs have great scientific and economic importance but have recently experienced widespread decline attributed to increasing anthropogenic pressure on reef systems. Physical damage events, such as ship groundings, when coupled with existing nutrient stress and changing global climate present a poor outlook for successful natural recovery of reef communities. The main goal of the proposed research is to better understand how environmental factors, both local and global, affect the coral holobiont and influence overall …

A Catch Per Unit Effort (Cpue) Spatial Metric With Respect To The Western North Atlantic Pelagic Longline Fishery, Max Appelman

HCNSO Student Theses and Dissertations

Catch per unit effort (CPUE) is a quantitative method used to describe fisheries worldwide. CPUE can be presented as number of fish per 1000 hooks, number of fish per amount of fishing time, or with any unit of effort that best describes the fishery (e.g., search time, hooks per hour, number of trawls). CPUE is commonly used as an index to estimate relative abundance for a population. These indices are then applied within stock assessments so that fisheries managers can make justified decisions for how to manage a particular stock or fishery using options such as quotas, catch …

Computer Modeling The Incursion Patterns Of Marine Invasive Species, Matthew W. Johnston

HCNSO Student Theses and Dissertations

Abstract Not Available.

Translocation Of Acropora Cervicornis Across Geographic Regions: Investigating Species Recovery And Restoration, Bradley Cody Bliss

HCNSO Student Theses and Dissertations

This thesis is the first known study to relocate Acropora cervicornis across multiple regions of the Florida Reef Tract. Since 2006, A. cervicornis has been listed as a threatened coral species under the U.S. Endangered Species Act. In response, restoration efforts utilizing coral nursery methods have been implemented throughout the Caribbean. The primary objective of this research was to determine the response of A. cervicornis colonies to being relocated between two coral nurseries separated by approximately 150km along the Florida Reef Tract. To accomplish this, a reciprocal transport was conducted between coral fragments with known genotypes from Broward County and …

Feeding Ecology And Habitat Utilization Of The Great Barracuda Sphyraena Barracuda (Edwards 1771) In Southeast Florida, Noah R. Hansen

HCNSO Student Theses and Dissertations

Great barracuda Sphyraena barracuda is a large predatory teleost found circumglobally, other than the Eastern Pacific Ocean. The species is commonly caught by both recreational and commercial fishermen as bycatch while targeting other, more economically or recreationally valuable fishes. This species also exhibits an ontogenetic shift in habitat, with juveniles inhabiting mangrove and seagrass habitats, while adults live near offshore reefs and associated structure.

This thesis consists of two separate studies of S. barracuda: 1) feeding ecology along an ontogenetic gradient and 2) habitat utilization of as derived through electronic tagging. The first chapter of this thesis describes the …

Ecology, Population Dynamics, And Sexual Characteristics Of Commensal Leucothoid Amphipods With The Sponge Cliona Varians In The Florida Keys (Crustacea: Amphipoda), Stephanie Lynn Andringa

HCNSO Student Theses and Dissertations

Recent observations have identified a new species of leucothoid amphipod, Leucothoe “sp. F,” associated with the sponge Cliona varians. This project examined the relationship between this amphipod and its sponge host at three sites in the Florida Keys with differing hydrodynamic regimes. Ninety-eight sponge samples with a total of 2,030 amphipods were collected between December 2011 and September 2012. Leucothoe “sp. F” is currently a common species in the Florida Keys strongly associated with C. varians; its distribution strongly coincides with open tidal currents from the Gulf of Mexico. Seasonality, depth, and tidal regimes not only influence population …

Caffeine Elicits Time Dependent Biphasic Response Of Functional Recovery In Carassius Auratus Hemilabyrinthectomy Lesion Model, Bethany Brockhoff

HCNSO Student Theses and Dissertations

Caffeine is one of the most popular psychostimulant drugs worldwide. Its effects are exerted through a variety of complex mechanisms, apparently primarily via interactions with adenosine A1 and A2A receptors. This drug has also been proven to elicit neuroprotective responses in a number of different brain disorders of the Central Nervous System (CNS), as well as provide enhancement of cognitive abilities. Moreover, a biphasic set of functional and structural neurological changes are often found in these receptors among diverse vertebrates. I investigated the effects of chronic caffeine exposure on functional recovery of the dorsal light reflex (DLR) in hemilabyrinthectomized common …

Feasibility Of Using Biofuel By-Products As A Sustainable Nutritional Resource For Aquaculture Production Of Litopenaeus Vannamei, Erik David Demicco

HCNSO Student Theses and Dissertations

Many different algal species can provide an acceptable protein ingredient, with good digestibility, for shrimp feeds. Compared to fish meal, similar protein, carbohydrate, and lipid levels can be found in select algal species. Traditional shrimp diets in aquaculture rely on fish meal and fish oil from pelagic fish fisheries. A reduction or elimination of these ingredients would reduce the dependency of shrimp aquaculture on offshore fisheries and increase economic competiveness. Biofuel production produces algal by-products of potential use to aquaculturists that might reduce or eliminate the need for fisheries products in shrimp feed. Established uses for by-products from biofuel production …

Reproductive Parameters Of Two Coastal Pelagic Fishes Off Southeast Florida: Blackfin Tuna Thunnus Atlanticus And Little Tunny Euthynnus Alletteratus, Sonia Ahrabi-Nejad

HCNSO Student Theses and Dissertations

The ability to manage a fish stock relies on an understanding of life history characteristics and basic biology of the species. Numerous age-growth studies are facilitated by the relative ease of ageing fishes through hard-part analyses. Determining reproductive parameters for fish populations is equally important for stock assessments and management, and histological examination of gonads provides the most accurate determination of fecundity and spawning periods. Coastal pelagic fishes are often targeted commercially and recreationally due to their easy access by private vessels. However, there are few studies researching the biology and reproduction of recreational fishes in the waters of Southeastern …

Changes In Coral Community Composition At Devil's Crown, Galapagos Islands, Ecuador: A 7,700 Year Perspective, Katharine Jane Hendrickson

HCNSO Student Theses and Dissertations

Coral mortality caused by El Niño–Southern Oscillation (ENSO) activity and its related disturbances has been researched throughout the Eastern Pacific. In the past three decades, disturbances related to the El Niño–Southern Oscillation (ENSO) have been shown to influence coral growth in the Eastern Pacific. In the Galápagos Islands, Ecuador, more than 97% of corals experienced mortality after the severe 1982-1983 ENSO episode. However, two of the most dominant coral species found in a coral community adjacent to Devil’s Crown; Psammocora stellata and Diaseris distorta survived this severe ENSO event. By reconstructing sediment cores of the coral community, this study assessed …

Distribution, Growth, And Impact Of The Coral-Excavating Sponge, Cliona Delitrix, On The Stony Coral Communities Offshore Southeast Florida, Ari Halperin

HCNSO Student Theses and Dissertations

Bioerosion is a major process that affects the carbonate balance on coral reefs, and excavating sponges from the genus Cliona are some of the most important bioeroders on Caribbean reefs. The orange boring sponge, Cliona delitrix, is an abundant excavating sponge offshore southeast Florida that frequently colonizes dead portions of live stony corals, killing live coral tissue as it grows. With the recent decline in coral cover attributed to combined environmental and anthropogenic stressors, the increasing abundance of excavating sponges poses yet another threat to the persistence of Caribbean coral reefs.

In the first part of this study, I …

Assessment Of Macroinvertebrate Communities And Heavy Metal Contamination Along The Intracoastal Waterway In Fort Lauderdale, Florida, Robert Bernhard

HCNSO Student Theses and Dissertations

Sediments from four areas adjacent to marinas and a background site in the Intracoastal Waterway were assessed for macroinvertebrate composition and heavy metal contamination. Sediment core samples were collected in 2004 and 2005 for analyses of macroinvertebrate composition and sediment grain size. Additional sediment samples were collected in 2005 for chemical analyses of metals (Al, As, Cd, Cr, Cu, Fe, Pb, Hg, Ni and Zn). MANOVA and dendograms using Bray-Curtis similarity matrices grouped the sites into two clusters: the 3 sites closest to the New River formed one group, and the two end sites formed the other. The sites nearest …

The Effects Of An Extended Power Plant Shutdown On The Florida Manatee (Trichechus Manatus Latirostris) In Port Everglades, Florida, Christopher Grissett

HCNSO Student Theses and Dissertations

Florida manatees (Trichechus manatus latirostris) seek out warmer waters during winter months when ambient water temperatures drop below 20 degrees Celsius. Over time, manatees have discovered artificial warm water sites from power plant discharges in addition to natural sites such as springs and passive thermal refugia (PTRs). The Florida Power and Light (FPL) Port Everglades power plant in Broward County is one such artificial warm water refuge used by manatees. This plant was shutdown on July 16, 2013, and is expected to remain off line for at least three years during demolition and construction of a new facility. …

Habitat And Seasonal Distribution Of The North American River Otter (Lontra Canadensis) And Vertebrate Species Assemblages In Two Protected Areas Of The Florida Everglades, Catherine Faye Hamilton

HCNSO Student Theses and Dissertations

The Florida Everglades ecosystem is threatened by human development, increased pollution, freshwater scarcity, and invasive species; factors that have negatively impacted the Everglades and native species health and populations. Man-made canals and levies have redirected the natural flow of fresh water from Lake Okeechobee into the Florida Everglades, starving central and south Florida ecosystems of necessary fresh water and nutrients. Through the efforts of the Comprehensive Everglades Restoration Project (CERP), freshwater is being redirected back into central and south Florida, returning the sheet flow of water back into the Everglades. Monitoring species abundance in the Everglades is a beneficial conservational …

Modeling Flightless Galapagos Seabirds As Impacted By El Nino And Climate Change, Brian Seth Putman

HCNSO Student Theses and Dissertations

Noteworthy species endemic to the Galapagos Islands off Ecuador are two flightless birds, the Galapagos Penguin (Spheniscus mendiculus) and Flightless Cormorant (Phalacrocrax harrisi). Both adapted increased swimming ability at the cost of flight. This however has limited their ability to find richer feeding grounds in times of low resource availability, or to escape potential predators. Their population numbers, though small, were stable. Stress on this stability has increased since human arrival. Various invasive species from pets, farm animals and rats to even mosquito vectors of avian disease accompanied humans. . El Nino Southern Oscillation or ENSO …

Microbial Community Assembly Found With Sponge Orange Band Disease In Xestospongia Muta (Giant Barrel Sponge), Rebecca Mulheron

HCNSO Student Theses and Dissertations

The giant barrel sponge, Xestospongia muta is an iconic and essential species of the coral reefs in South Florida. The sponge has primary roles providing ecosystem services and creating unique habitats for diverse microbial communities. On April 27, 2012 an outbreak of Sponge Orange Band Disease (SOB) was detected off the coast of South Florida. The disease begins with sponge bleaching, followed by mesohyl or “mesohyl” necrosis and often total mesohyl disintegration. Sampling from two diseased populations at Boynton Beach and Fort Lauderdale, FL took place on May 11th and May 29th, 2012. Each of the nine diseased sponges from …

Long-Term Stony Coral Transplantation Success Offshore Southeast, Florida, Usa, Theresa Elizabeth Robitaille

HCNSO Student Theses and Dissertations

Transplanted coral (Order: Scleractinia) colony condition was surveyed at five injury event sites, two coral nurseries, and one impact minimization location off the coast of Broward County, Florida, USA in 2012. Because stony corals are long-lived and slow growing, generally growing less than one centimeter in diameter per year, determining transplantation success requires long-term (greater than two years) monitoring. Long-term monitoring efforts, however, are rarely completed. This study is unique in that it examined stony coral transplantation success of several projects over a time period of 6-17 years. Control colonies were also surveyed in order to compare naturally growing coral …

Loggerhead Sea Turtle (Caretta Caretta) Hatchling Disorientation In Broward County, Florida, Allison Durland Donahou

HCNSO Student Theses and Dissertations

Hatchling disorientation after emergence is a major factor impacting sea turtle populations. This study utilized data from over 1,200 Florida Fish and Wildlife Conservation Commission (FWC) Marine Turtle Disorientation Report forms from years 2006 to 2011 to assess changes in the severity and locations of disorientation events and the impact of municipal beach lighting ordinances. While the FWC forms were completed for all sea turtle species observed, this study focused only on loggerhead sea turtles (Caretta caretta). A Disorientation Severity Index (DSI) was derived from the number of hatchlings and the direction of their tracks leaving the nests …

Biophysical Interactions In The Straits Of Florida: Turbulent Mixing Due To Diel Vertical Migrations Of Zooplankton, Cayla Whitney Dean

HCNSO Student Theses and Dissertations

Diel vertical migrations (DVM) comprise the largest animal migration on the planet and are a phenomenon present in all bodies of water on Earth. A strong sound scattering layer undergoing DVM was observed in the Straits of Florida via a bottom-mounted Acoustic Doppler current profiler (ADCP) Workhorse Longranger 75 kHz (Teledyne RD Instruments) located at the 244 m isobath. ADCP average backscatter showed a clear periodicity corresponding with sunrise and sunset times indicating the presence of a nocturnal DVM. Analysis of the ADCP backscatter data indicated zooplankton swimming velocities were faster during sunrise than sunset times. In several cases the …

Socioeconomics Of The Lionfish Derby Fishery, Kristina Ann Trotta

HCNSO Student Theses and Dissertations

Throughout the western North Atlantic Ocean, Caribbean Sea, and the Gulf of Mexico, invasive Indo-Pacific lionfish (Pterois volitans/miles) have established dense populations, greatly impacting their host environments. Lionfish tournaments have been an important tool for resource managers and other concerned stakeholders in suppressing local populations of lionfish. Tournaments can also bring economic benefits to the communities where they are held, despite this not being the primary purpose.

Five derby events in Florida and the Bahamas were surveyed and 119 participants were interviewed on site, using a survey asking them to describe (1) the lionfish derby experience; (2) non-derby related lionfish …