Marine Biology Commons^™

Impact Of Thermal-Hydric Stress Of Physiological Performance And Mating Behavior Of Fiddler Crabs, Talene G. Yeghissian

Dissertations

Fiddler crabs live on the edge of their thermal tolerance limits, balancing the need to thermoregulate with the need to mate. Previous research suggests that increased temperature reduces fiddler crab surface activity time, thus decreasing mating opportunities, throughout the range species with greatest impacts to low latitude populations. The less studied missed mating opportunities associated with behavioral compensation for thermal stress are crucial to understanding species vulnerability to climate change. In this dissertation, I describe a combination of experimental and observational approaches in the field and in the laboratory to investigate the physiological and behavioral responses of fiddler crabs to …

Development Of A Flow Cytometry Method For The Identification And Enumeration Of Enterococcus Faecalis, Riza Magbitang

Master's Theses

A multi-color flow cytometry method coupled with fluorescent staining was developed to detect and quantify E. faecalis concentrations in coastal waters as an alternative to the traditional membrane filtration method. The developed method was used to characterize E. faecalis during batch growth and yielded consistent results across the various physiological states of the cells. Additionally, the application of propidium iodide (i.e., a viability stain), afforded the method the ability to differentiate between cells with intact and compromised cell membranes, which raises the potential of quantifying cells that are in viable-but-non-culturable (VBNC) state. Initial field test using natural seawater samples spiked …

Examining The Effects Of Food Supply On Eastern Oyster (Crassostrea Virginica) Larval Performance And Settlement Potential In Delaware Bay And Mississippi Sound, James C. Klein

Master's Theses

Oyster population maintenance and growth require sufficient larval stocks capable of timely development, growth, and successful metamorphosis, whereby larval performance and settlement potential determines the capacity for a larval cohort to effectively establish into an existing population. Exogenous factors influencing larval performance include temperature, salinity, and particularly food supply. Regarding food, a sufficiently abundant and nutritionally balanced diet composed of protein, lipids, and carbohydrates is critical for successful metamorphosis. The influence of exogenous factors on Crassostrea virginica settlement potential were examined in Delaware Bay and Mississippi Sound by incorporating in situ environmental conditions and food supply metrics into a well-established …

Effects Of Dissolved Oxygen And Ph On Eastern Oyster (Crassostrea Virginica) Growth, Karina D. Ledezma

Honors Theses

Coastal ecosystems, known for their abundant natural resources and role in environmental processes, are facing challenges posed by climate change, pollution and anthropogenic activities. Among these challenges is the expansion of hypoxic zones, characterized by low dissolved oxygen (DO) levels, which poses a significant threat to benthic organisms and oyster fisheries. This research investigates the interaction between hypoxia and pH dynamics, intensified by freshwater input, and the biomineralization of Eastern oysters (Crassostrea virginica). To explore these dynamics, experimental trials were conducted in 24 tanks, simulating normoxic, hypoxic, and fresh hypoxic conditions, to assess the impact of hypoxia on …

Short-Term Temporal Trends Of A Coral Reef In Samana (Dominican Republic): The Value Of A Permanent Monitoring Program To Identify Drivers Of Rapid Change, Aldo Croquer, Someira Zambrano, D. Yasmín Evangelista-Perez, Samuel King, Sergio Guendulain-Garcia, Maria F Villalpando, Rita Sellares-Blasco

Gulf and Caribbean Research

Permanent monitoring programs are valuable to identify drivers of ecosystem trends. For example, in 2021, we reported the first record of Stony Coral Tissue Loss Disease (sctld) along the northeastern coast of the Dominican Republic, affecting major reef—building coral species with a prevalence above 30%. However, a few sites such as Carenero remained unaffected by sctld for almost 2 years. The average coral cover in this site was about 18—25% (mean 18.3% ± sd 1.5), and disease prevalence did not exceed 7% in the coral community. During the first quarter of 2022, a few colonies (

A Preliminary Investigation Of Adherence To Shell Length Regulations And Adaptive Capacity Of The Turneffe Atoll Queen Conch (Aliger Gigas) Fishery, Belize, Elsa M. K. Brenner, Vincent Sollitto, Vincent Baribeau, Rebecca Branconi, Paul Simonin

Gulf and Caribbean Research

No abstract provided.

Lessons From An Iconic Grouper: Sex, Science, And Serendipity, Yvonne J. Sadovy De Mitcheson

Gulf and Caribbean Research

From a common little damselfish and spectacular grouper aggregations, to disappearing reef fishes and the dark side of the international seafood trade, my journey has passed through a fascinating and worrying period of change in the way we view and treat our oceans. Although much of my career has been in the Indo—Pacific, I focus here mainly on my professional ‘roots’ in the Caribbean and on the Nassau Grouper Epinephelus striatus, a species that kept me curious, taught me patience, never to assume and always to stay hopeful. This fish is almost an obsession; why can we not better safeguard …

An Aggregation Of The Pandalid Shrimp, Heterocarpus Ensifer, On Deep Reef Habitats Of The West Florida Slope, Eastern Gulf Of Mexico, Steve W. Ross

Gulf and Caribbean Research

Heterocarpus ensifer A. Milne—Edwards (1881) (Crustacea: Pandalidae), armed nylon shrimp, is widely distributed in the western and eastern North Atlantic Ocean. In the western Atlantic this shrimp occurs from off North Carolina to Brazil and in the Gulf of Mexico (GOM), western Bahamas, and Caribbean Sea at depths of 170—885 m. Despite its widespread occurrence, ecology or biology information for this species are sparse, and in situ observations of abundance, behavior and habitat preferences are particularly lacking. During extensive submersible and ROV observations on and near deep—reefs in the north—central and eastern GOM, a remarkably large aggregation of H. ensifer …

Seasonal Abundance Of The Nudibranch Dondice Jupiteriensis On The Colonial Hydroid Eudendrium Carneum, Erika Molina, Daniela Gutierrez-Andrade, Samantha Schlegel, Julia Piper, Louis J. Ambrosio, Michael L. Middlebrooks

Gulf and Caribbean Research

Benthic colonial hydroids often serve as a host to a large variety of invertebrate taxa. The colonial hydroid Eudendrium carneum Clarke, 1882 is host to a variety of epifauna, including the recently described nudibranch Dondice jupiteriensis García—Méndez & Valdés, 2022. Like many species of heterobranch sea slugs, little is known about the natural history and population biology of D. jupiteriensis. Here we describe a year—long study recording the population density and size structure of D. jupiteriensis on E. carneum colonies in Tampa Bay, FL USA. We found that the D. jupiteriensis population persists year—round but is the densest during …

Benthic And Epibenthic Invertebrate Assemblages Associated With Estuarine Submerged Aquatic Vegetation Differ Between Native And Invasive Plants, Marissa Hall, Kathryn O'Shaughnessy, Bethany Kiley, Ashley Mcdonald, Taber Faurie, Zoey Hendrickson, Anna Reimer, Samantha Smith, Charles Martin

Gulf and Caribbean Research

Estuarine submerged aquatic vegetation (SAV) provides vital habitat for macroinvertebrate communities that support diverse food webs and subsequent ecosystem services. Invasive SAV, however, has the potential to alter estuarine food webs through competition with native SAV, resulting in different associated biological communities. In the Mobile-Tensaw Delta (Alabama, USA), the invasive Eurasian milfoil, Myriophyllum spicatum, is fast becoming the dominant SAV, out-competing native SAV such as wild celery, Vallisneria americana. This study investigated the above- and belowground macroinvertebrate assemblages associated with these SAV habitats. We found significantly different assemblages between the SAV, with V. americana supporting more even and …

Biophysical Factors Affecting Habitat Suitability For Crassostrea Virginica, Jason D. Tilley

Dissertations

Oyster reefs provide a variety of important ecosystem services. However, the mortality rate of eastern oyster, Crassostrea virginica, the dominant species that produces oyster reefs in the northern Gulf of Mexico, is increasing at an alarming rate due to a variety of abiotic and biological factors. I examined how biophysical factors, including the less-studied fatty acid profiles of the suspended particulate matter on which oysters feed, influenced morphometric condition of C. virginica.

I sampled suspended particulate matter (SPM) and oysters in-situ in the western Mississippi Sound, which historically supported the majority of oyster production in Mississippi waters. Sampling …

Evaluating Habitat Use By Nekton In Widgeon Grass (Ruppia Maritima), Shoal Grass (Halodule Wrightii), And Unvegetated Bottom Habitats In The Grand Bay National Estuarine Research Reserve, Jessica Woodall

Master's Theses

Seagrass beds support high biodiversity and animal abundance, serve as feeding grounds for a variety of animals, offer shelter from predation, and act as a nursery habitat for juveniles. The species composition of seagrass beds can impact their use as habitat by animals. Two common species of seagrass in the Gulf of Mexico are Ruppia maritima (widgeon grass) and Halodule wrightii (shoal grass). The shallow coastal waters of the Grand Bay National Estuarine Research Reserve (NERR) support both species, but the use of each seagrass as habitat by nekton is poorly understood, which can limit management decision-making. Nekton communities were …

Bsc 345 Southern Miss Gulf Scholars Program Module, Southern Miss Gulf Scholars Program

Southern Miss Gulf Scholars

BSC 345 Southern Miss Gulf Scholars Program Curriculum

Throughout this course students will learn about important marine resources that drive the local seafood economy. On a field trip to the Maritime and Seafood Museum, students will learn about this historical seafood industry and industry practices. Student will also tour the USM Thad Cochran Marine Aquaculture Center to learn about modern aquaculture technologies and take an excursion at sea to observe the off-bottom aquaculture site next to Deer Island.

Connecting Social And Ecological Systems In Small-Scale Fisheries In The Philippines, Sara Eisler Marriott

Dissertations

Nearly 50% of all marine fish capture in the Philippines is from artisanal fisheries, most of which is un- or under-reported. As in many emerging nations around the world, the Philippines cannot fully address overfishing by managing only half of the catch that comes from commercial fisheries. Marine reserves are a popular governance strategy for conservation and of growing interest for fisheries management. Many marine reserves in the Philippines, however, are not considered effective. In 2014, Rare, an international NGO, implemented a community-based management program to increase the effectiveness of the marine reserves, and while it found biomass increased, there …

Estimation Of Mortality Rates For The Gulf Menhaden Stock And Reference Point Implementation For The Fishery, Catherine Wilhelm

Master's Theses

The Gulf menhaden stock is the target of a large commercial fishery in the Gulf of Mexico. To address the needs of both the stock and fishery, I performed two studies. I first addressed the natural mortality rates currently used in the Gulf menhaden stock assessment. To update these rates, I used data from a tagging study conducted from 1970 to 1988. Adult and juvenile menhaden were tagged, released, and recovered in fish processing plants. To evaluate the data, I built a Bayesian model using the negative binomial distribution to estimate natural mortality, catchability, and the overdispersion factor parameters. I …

Multispecies Use Of Various Habitats In The Mississippi Sound With An Emphasis On Future Oyster Reef Construction, Austin Draper

Master's Theses

Transient fish have high economic value and effective restoration projects must consider the variable impacts they may have on these fish in addition to the target organism or habitat being restored. Globally, oyster reef construction is common and will continue but data on their impacts to transient fish is lacking. This study used acoustic telemetry to provide baseline data on the potential for interaction between five transient fish species, and oyster reef construction activities. Overall, I noted that habitat preferences are hierarchical with sandy habitats nearest to bay or river mouths having high transient fish use. Oyster reef construction in …

Habitat Use Of Gulf Sturgeon (Acipenser Oxyrinchus Desotoi) In Pascagoula River Holding Areas And In Estuarine And Marine Environments Including Ship Island, Mississippi And Mobile Bay, Alabama, Elizabeth M. Greenheck

Master's Theses

Gulf Sturgeon (GS) are a federally threatened, anadromous species that inhabit coastal rivers in the northern Gulf of Mexico and make annual migrations between riverine and marine habitats. They are divided into western or an eastern river systems based on the location of their natal river relative to Mobile Bay. Tracking of GS movements using acoustic telemetry has occurred since the late 1990s but has increased in use since 2015 for monitoring important habitats that GS rely on throughout their lifetime. For this study, tagged GS were monitored in three areas throughout the central Gulf of Mexico: the Mobile Bay …

Assessment Of Living Shorelines For Restoring Fish Habitats: A Case Study From Coastal Alabama, Claire Legaspi, Matheus De Barros, Alexandra Rodriguez, Ronald Baker

Gulf and Caribbean Research

No abstract provided.

A Preliminary Assessment Of The Spawning Potential Ratio Of Five Target Species Of The Coastal Gillnet Fishery In Guyana And Suriname, Tomas Willems, Elford Liverpool, Michael Hiwat

Gulf and Caribbean Research

Data—limited stock assessment methods have the potential to positively impact livelihoods of fishermen around the world by providing management recommendations that aim to optimize sustainable yields from fisheries. Some years ago, a novel length— based (LB) method was developed for the assessment of spawning potential ratio (SPR), a measure of the reproductive capacity of fish stocks. We applied the LB—SPR method to 5 important target species of the coastal gillnet fishery in Guyana and Suriname. Nebris microps (Smalleye Croaker; 32% SPR) and Macrodon ancylodon (King Weakfish; 34% SPR) had the highest spawning potential, but remained below the 40% target level …

Microdebris Abundance, Distribution, And Ingestion By Sargassum-Associated Juvenile Fishes In The Gulf Of Mexico, Olivia L. Lestrade, Frank Hernandez

Gulf and Caribbean Research

Holopelagic Sargassum is a critical nursery habitat for the early life stages of many marine fishes, including several federally managed species in the United States and Caribbean. Sargassum is often aggregated along surface convergence features where microdebris (synthetic, semi—synthetic, and naturally—derived particles size) have also been found in relatively high concentrations. In this study, we collected microdebris from Sargassum and adjacent open water habitats (in 2018), and juvenile fishes from Sargassum (in 2017 and 2018) in the northern Gulf of Mexico to quantify habitat—specific microdebris concentrations and the degree to which Sargassum—associated juvenile fishes ingest microdebris. Microdebris concentrations within …

Biomass And Productivity Of Thalassia Testudinum In Estuaries Of The Florida Panhandle, Laura A. Yarbro, Paul R. Carlson, Ken L. Heck, Dorothy Byron, Sandra Brooke, Linda Fitzhugh, Sheila Scolaro, Barbara Albrecht, Rachel Presley, Jane M. Caffrey

Gulf and Caribbean Research

Thalassia testudinum often dominates seagrass meadows of the Florida panhandle but few measurements of productivity, biomass, density, turnover or leaf area index in this region have been made. We targeted 5 estuaries located at similar latitudes, 30⁰ ± 0.3⁰N: Big Lagoon, Santa Rosa Sound, St. Andrew Bay, St. Joseph Bay, and St. George Sound. This study was one component of a collaborative partnership of state and local researchers examining factors preventing recovery in panhandle estuarine areas that had historically contained seagrass in the 1940s and 1950s. Measurements were made twice in 2016, once in June and then again in summer …

Dynamics Of The Benthic Communities Of Pigeon Islets (Guadeloupe Island, Lesser Antilles) From 2012 To 2021 Monitored By A Photo-Quadrats Technique, Hanna-May Malahel, Camille Freschet, Simone Mège, Claude Bouchon

Gulf and Caribbean Research

Since 2012, the benthic communities of the Pigeon Islets (Guadeloupe Island, Lesser Antilles) have been monitored biannually by the National Park of Guadeloupe using photo—quadrats. This monitoring was carried out at 12 coral reef stations distributed around the islets. The data collected from 2012 to 2021 highlight the significant events that disrupted the coral communities of Guadeloupe. Among these remarkable phenomena, an episode of coral bleaching occurred in 2019, followed by the appearance of a new coral disease, Stony Coral Tissue Loss Disease (SCTLD), in 2020. As a result of these threats, a drop of 54% of coral cover was …

Jonathan Franco López 1955 – 2023, Angel Moran-Silva, Rafael Chávez-López, Sergio Cházaro-Olvera

Gulf and Caribbean Research

No abstract provided.

Is Temperature, Dissolved Oxygen, Or Salinity Driving Oyster Mortality On Breakwaters?, Ashten Notz, Aaron Bland, Ronald Baker

Gulf and Caribbean Research

No abstract provided.

Identifying Microdebris In Biodeposits Of The Eastern Oyster, Crassostrea Virginica, Elizabeth E. Hieb, Sadie Snow, Ruth H. Carmichael

Gulf and Caribbean Research

No abstract provided.

Multi-Year Environmental Trends Of Shrimp Black Gill (Hyalophysa Lynni) Prevalence In Texas Gulf Coast Shrimp Populations, Jillian L. Swinford, Joel Anderson

Gulf and Caribbean Research

Shrimp Black Gill, caused by the apostome ciliate Hyalophysa lynni, is an emerging disease impacting penaeid shrimp populations along the southeast Atlantic Coast and the Gulf of Mexico (GOM). Changing annual environmental conditions may drive infection levels of this parasitic ciliate in these populations, which comprise one of the largest fisheries in the United States. Hyalophysa lynni is established on the Texas Gulf Coast, and prevalence of this parasite has a strong seasonal and spatial trend, likely linked with high temperature and a wide range of estuarine salinities. Texas Parks and Wildlife Department monitored shrimp black gill in 2 …

A Histological Assessment Of The Reproductive Cycle Of The Sea Urchin, Lytechinus Variegatus, Adele C. Cunningham, Victoria K. Gibbs, Stephen A. Watts

Gulf and Caribbean Research

The regular echinoid Lytechinus variegatus is a valuable model for the study of early embryological development. Lytechinus variegatus inhabits nearshore seagrass beds in the Gulf of Mexico and Caribbean, and the species ranges from the Carolinas along the US Atlantic coast to Brazil. Evaluating the natural reproductive cycle of L. variegatus will aid in understanding its role in community structure and in the management of this resource when housed in the laboratory. From April 2001 to September 2003, at intervals of 4—6 weeks, L. variegatus (41−50 mm diameter; n = 32 individuals/collection) were collected at Eagle Harbor in St. Joseph’s …

Policy Implications Of Managing Biodiversity And Natural Resources Across International Boundaries, Dillon Brown

Dissertations

Fisheries Management under the best of scenarios is a complex action. It requires thoughtful consideration of resources that tend to be out of sight, widely distributed, highly variable both spatially and temporally, and present dramatic variation in life history and ecology. No one management approach has been developed which can effectively incorporate all these variables. Add to this the issue of transnational boundary movements of these resources, and one discovers that this complex issue needs to be addressed by multiple entities, agencies, and nations to have any chance of success.

This research set out to discover ways in which fisheries …

Trade-Offs Between Risks Of Predation And Starvation In Larvae Make The Shelf Break An Optimal Spawning Location For Atlantic Bluefin Tuna, Taylor A. Shropshire, Steven L. Morey, Eric P. Chassignet, Mandy Karnauskas, Victoria J. Coles, Estrella Malca, Raúl Laiz-Carrión, Øyvind Fiksen, Patricia Reglero, Akihiro Shiroza, José M. Quintanilla Hervas, Trika Gerard, John T. Lamkin, Michael R. Stukel

Faculty Publications

Atlantic bluefin tuna (ABT) (Thunnus thynnus) travel long distances to spawn in oligotrophic regions of the Gulf of Mexico (GoM) which suggests these regions offer some unique benefit to offspring survival. To better understand how larval survival varies within the GoM a spatially explicit, Lagrangian, individual-based model was developed that simulates dispersal and mortality of ABT early life stages within realistic predator and prey fields during the spawning periods from 1993 to 2012. The model estimates that starvation is the largest cumulative source of mortality associated with an early critical period. However, elevated predation on older larvae is …

Drift Macroalgal Distribution In Northern Gulf Of Mexico Seagrass Meadows, Kelly M. Correia, Scott B. Alford, Benjamin A. Belgrad, Kelly M. Darnell, M. Zachary Darnell, Bradley T. Furman, Margaret O. Hall, Christian T. Hayes, Charles W. Martin, Ashley M. Mcdonald, Delbert L. Smee

Faculty Publications

Drift macroalgae, often found in clumps or mats adjacent to or within seagrass beds, can increase the value of seagrass beds as habitat for nekton via added food resources and structural complexity. But, as algal biomass increases, it can also decrease light availability, inhibit faunal movements, smother benthic communities, and contribute to hypoxia, all of which can reduce nekton abundance. We quantified the abundance and distribution of drift macroalgae within seagrass meadows dominated by turtle grass Thalassia testudinum across the northern Gulf of Mexico and compared seagrass characteristics to macroalgal biomass and distribution. Drift macroalgae were most abundant in areas …