Marine Biology Commons^™

Estimating The Potential Impacts Of Large Mesopredators On Benthic Resources: Integrative Assessment Of Spotted Eagle Ray Foraging Ecology In Bermuda, Matthew J. Ajemian, Sean P. Powers, Thaddeus J. T. Murdoch

University Faculty and Staff Publications

Declines of large sharks and subsequent release of elasmobranch mesopredators (smaller sharks and rays) may pose problems for marine fisheries management as some mesopredators consume exploitable shellfish species. The spotted eagle ray (Aetobatus narinari) is the most abundant inshore elasmobranch in subtropical Bermuda, but its predatory role remains unexamined despite suspected abundance increases and its hypothesized specialization for mollusks. We utilized a combination of acoustic telemetry, benthic invertebrate sampling, gut content analysis and manipulative experiments to assess the impact of spotted eagle rays on Bermudian shellfish resources. Residency and distribution of adult spotted eagle rays was monitored over …

An Approach For Use Of Dual Frequency Identification Sonar (Didson) To Quantify Behavioral Aspects Of Piscivory At Ecologically Relevant Time And Space Scales, Victoria E. Price

Master's Theses

Predator-prey interactions of large vagile fishes are difficult to study in the ocean due to limitations in the space and time requirements for observations. Small-scale direct underwater observations by divers (<10m >radius) and large-scale hydroacoustic surveys (10s - 100s km2) are traditional approaches. However, large piscivorous predators identify and attack prey at the scale of meters to tens of meters. Dual- Frequency Identification Sonar, or DIDSON, is a high-resolution acoustic camera operating in the MHz range that provides detailed continuous video-like imaging of objects out to 30 m range. This technology can be used to observe predator-prey interactions at ecologically …

Effects Of The Parasitic Dinoflagellate Hematodinium Sp. On Blue Crab (Callinectes Sapidus) Activity Predation And Habitat Selection, John M. Tiggelaar Ii

Biological Sciences Theses & Dissertations

The blue crab Callinectes sapidus occurs along the Atlantic and Gulf coasts of the United States, and in high salinity regions, they are subject to lethal infection by the parasitic dinoflagellate Hematodinium. In Virginia's seaside estuaries, the prevalence of Hematodinium infection of C. sapidus can sometimes exceed 50%, threatening the commercial fishery for this species. Indeed, other commercially important crustacean fisheries have approached collapse due to Hematodinium infections. Most studies of this host-parasite interaction have focused on epidemiology, host-pathogen dynamics, and pathogen transmission, and little is known about the impact of the parasite on host behavior and population dynamics. …

Age Composition And Distribution Of Red Drum (Sciaenops Ocellatus) In Offshore Waters Of The North Central Gulf Of Mexico: An Evaluation Of A Stock Under A Federal Harvest Moratorium, Sean P. Powers, Crystal Hightower, J. Marcus Drymon, Matthew W. Johnson

University Faculty and Staff Publications

Because of a lack of fishery- dependent data, assessment of the recovery of fish stocks that undergo the most aggressive form of management, namely harvest moratoriums, remains a challenge. Large schools of red drum (Sclaenops ocellatus) were common along the northern Gulf of Mexico until the late 1980s when increased fishing effort quickly depleted the stock. After 24 years of harvest moratorium on red drum in federal waters, the stock is in need of reassessment; however, fishery dependent data are not available in federal waters and fishery-independent data are limited. We document the distribution, age composition, growth, and condition of …

High Connectivity In The Deepwater Snapper Pristipomoides Filamentosus (Lutjanidae) Across The Indo-Pacific With Isolation Of The Hawaiian Archipelago, Michelle R. Gaither, Shelley A. Jones, Christopher Kelley, Stephen J. Newman, Laurie Sorenson, Brian W. Bowen

Fisheries Research Articles

In the tropical Indo-Pacific, most phylogeographic studies have focused on the shallow-water taxa that inhabit reefs to approximately 30 m depth. Little is known about the large predatory fishes, primarily snappers (subfamily Etelinae) and groupers (subfamily Epinephelinae) that occur at 100–400 m. These long-lived, slow-growing species support fisheries across the Indo-Pacific, yet no comprehensive genetic surveys within this group have been conducted. Here we contribute the first range-wide survey of a deepwater Indo-Pacific snapper, Pristipomoides filamentosus, with special focus on Hawai'i. We applied mtDNA cytochrome b and 11 microsatellite loci to 26 samples (N = 1,222) collected across …

Environmental Influences On Juvenile Fish Abundances In A River-Dominated Coastal System, Laure Carassou, Brian Dzwonkowski, Frank J. Hernandez, Jr., Sean P. Powers, William M. Graham, Kyeong Park, John Mareska

University Faculty and Staff Publications

We investigated the influence of climatic and environmental factors on variations in juvenile abundances of marine fishes in a river-dominated coastal system of the north-central Gulf of Mexico, where an elevated primary productivity sustains fisheries of high economic importance. Fish were collected monthly with an otter trawl at three stations near Mobile Bay from 1982 to 2007. Fish sizes were used to isolate juvenile stages within the data set, and monthly patterns in juvenile fish abundance and size were then used to identify seasonal peaks for each species. The average numbers of juvenile fish collected during these seasonal peaks in …

Brody-Bertalanffy Growth Curves From Tag And Recapture Studies On Cabezon (Scorpaenichthys Marmoratus) And Gopher Rockfish (Sebastes Carnatus) Of The Central Coast, Christie Yorke

Biological Sciences

No abstract provided.

Phylogeography Of The Reef Fish Cephalopholis Argus(Epinephelidae) Indicates Pleistocene Isolation Across The Indo-Pacific Barrier With Contemporary Overlap In The Coral Triangle, Michelle R. Gaither, Brian W. Bowen, Tiana-Rae Bordenave, Luiz A. Rocha, Stephen J. Newman, Juan A. Gomez, Lynne Van Herwerden, Matthew T. Craig

Fisheries Research Articles

Background

The Coral Triangle (CT), bounded by the Philippines, the Malay Peninsula, and New Guinea, is the epicenter of marine biodiversity. Hypotheses that explain the source of this rich biodiversity include 1) the center of origin, 2) the center of accumulation, and 3) the region of overlap. Here we contribute to the debate with a phylogeographic survey of a widely distributed reef fish, the Peacock Grouper (Cephalopholis argus; Epinephelidae) at 21 locations (N = 550) using DNA sequence data from mtDNA cytochrome b and two nuclear introns (gonadotropin-releasing hormone and S7 ribosomal protein).

Results

Population structure was significant …

Estimation Of Short-Term Tag-Induced Mortality In Horseshoe Crabs Limulus Polyphemus, Jennifer Mattei, Mark Beekey, H. R. Potter, C. S. Bond, Alyssa Woronik, J. A. Roberts, K. A. Smith

Biology Faculty Publications

Horseshoe crabs Limulus Polyphemus range along the East Coast of the United States and over 150,000 of them have been marked with U.S. Fish and Wildlife Service disk tags. It has been assumed that the tags do not harm the animals and are similar to common epibionts often found on the shells of the horseshoe crabs. We investigated whether newlv tagged adult female horseshoe crabs would exhibit higher short-term mortality rates than untagged adult females. All crabs were collected from a beach in Connecticut and then were transported to a laboratory for the experiment. Tagging involved drilling a small hole …

An In Situ, Individual-Based Approach To Quantify Connectivity Of Marine Fish: Ontogenetic Movements And Residency Of Lingcod, Mary Anne Bishop, Brad F. Reynolds, Sean P. Powers

University Faculty and Staff Publications

As modern fishery assessments change in an effort to be more accurate and encompass the range of potential ecosystem interactions, critical information on the ecology of species including life history, intra and inter-specific competitive interactions and habitat requirements must be added to the standard fishery-dependent and independent data sets. One species whose movements and habitat associations greatly affects exploitation patterns is lingcod, Ophiodon elongatus, which support an economically important fishery along the coastal waters of the Pacific Coast of North America. High site fidelity and limited movements within nearshore areas are hypothesized to have resulted in high catchability, a …

Distributions Of Sharks Across A Continental Shelf In The Northern Gulf Of Mexico, J. Marcus Drymon, Sean P. Powers, John Dindo, Brian Dzwonkowski, Terry A. Henwood

University Faculty and Staff Publications

Declines in shark populations have sparked researchers and fishery managers to investigate more prudent approaches to the conservation of these fish. As managers strive to improve data collection for stock assessment, fisheries-independent surveys have expanded to include data-deficient areas such as coastal regions. To that end, a catch series from a nearshore survey off Alabama was combined with data from a concurrent offshore survey with identical methodology to examine the depth use of sharks across the continental shelf (2–366 m). The combined data set contained 22 species of sharks collected from 1995 to 2008: 21 species in the offshore data …

Application Of Acoustic Telemetry To Assess Residency And Movements Of Rockfish And Lingcod At Created And Natural Habitats In Prince William Sound, Brad F. Reynolds, Sean P. Powers, Mary Anne Bishop

University Faculty and Staff Publications

Loss and/or degradation of nearshore habitats have led to increased efforts to restore or enhance many of these habitats, particularly those that are deemed essential for marine fishes. Copper rockfish (Sebastes caurinus) and lingcod (Ophiodon enlongatus) are dominant members of the typical reef fish community that inhabit rocky and high-relief substrates along the Pacific Northwest. We used acoustic telemetry to document their residency and movements in the nearshore waters of Prince William Sound, Alaska in order to assess use of created reef habitat in an individual-based manner. A total of 57 fish were surgically implanted with …

Seasonal Variability In Ichthyoplankton Abundance And Assemblage Composition In The Northern Gulf Of Mexico Off Alabama, Frank J. Hernandez, Jr, Sean P. Powers, William M. Graham

University Faculty and Staff Publications

Multiyear ichthyoplankton surveys used to monitor larval fish seasonality, abundance, and assemblage structure can provide early indicators of regional ecosystem changes. Numerous ichthyoplankton surveys have been conducted in the northern Gulf of Mexico, but few have had high levels of temporal resolution and sample replication. In this study, ichthyoplankton samples were collected monthly (October 2004–October 2006) at a single station off the coast of Alabama as part of a long-term biological survey. Four seasonal periods were identified from observed and historic water temperatures, including a relatively long (June–October) “summer” period (water temperature >26°C). Fish egg abundance, total larval abundance, and …

The Ratio Of Gametophytes To Tetrasporophytes Of Intertidal Chondrus Crispus (Gigartinaceae) Across A Salinity Gradient, Michele Guidone, Sean Grace

Biology Faculty Publications

Population studies of the Gigartinaceae (Rhodophyta) have often observed that the ratio of gametophytes to tetrasporophytes varies with the location of the population or the time of sampling. For some species, patterns have emerged that correlate this ratio to one or a few particular environmental variables, such as elevation, wave exposure, or season. Identifying these distributional patterns is an important step towards understanding what (if any) ecological differences exist between the two free-living life history stages.

The purpose of this study was to measure the ratio of gametophytes to tetrasporophytes of intertidal populations of Chondrus crispus across a decreasing salinity …

Movement Patterns And Population Genetics Of The American Horseshoe Crab In Relation To Long Island Sound Conservation Strategies, Jo-Marie Kasinak, Kirk A. Bartholomew, Mark Beekey, Jennifer Mattei

Biology Faculty Publications

The Connecticut Department of Environmental Protection (CTDEP) established three no-harvest zones for the horseshoe crab (Limulus polyphemus) population as part of a conservation plan for the species. Data from a long-term mark/recapture study of horseshoe crabs in conjunction with a microsatellite-based genetic survey of the population were analyzed to determine if this plan was appropriate to conserve genetic diversity and broaden our knowledge of movement patterns of Limulus in Long Island Sound (LIS). To date, ~53,000 crabs have been tagged over a 10 year period through the Project Limulus program with an annual average recapture rate of 12 …

Fisheries Management Paper No.245 - Aquaculture Of Coral, Live Rocks And Associated Products. Aquaculture Policy, Department Of Fisheries, Western Australia

Fisheries Management Papers

Aquarium enthusiasts use corals, live rock and associated products (e.g. live sand) for display and to maintain healthy water quality conditions in their marine aquariums. There is a large and growing market for these products. While the wild harvest fisheries for aquarium products in Western Australia are sustainably managed, output is capped, so increased product is needed to meet the market demand. With a trend towards the capping of wild harvest and additional pressures, such as the introduction of Marine Parks and other marine protected areas, the aquaculture of these products is set for industry development and expansion.

The large …

Biology And Conservation Of Horseshoe Crabs, John T. Tanacredi, Mark L. Bottom, David R. Smith

School of Marine and Environmental Sciences Faculty and Staff Publications and Presentations

We dedicate this book to Drs. Carl N. Shuster, Jr. and Koichi Sekiguchi for their life-long contributions to the biology and conservation of the magnificent horseshoe crab.

Thirty-Seven Additional Microsatellite Loci In The Pacific Lion-Paw Scallop (Nodipecten Subnodosus) And Cross-Amplification In Other Pectinids, Jessica Lynn Petersen, Ana M. Ibarra, Bernie May

Department of Animal Science: Faculty Publications

We characterized 37 new microsatellite markers in the Pacific lion-paw scallop (Nodipecten subnodosus) and tested for cross-amplification in four other species. Genetic diversity was estimated using 24 individuals from the Lagoon Ojo de Liebre, B.C.S., Mexico. Allelic richness varied from 5 to 27 alleles per locus and the average expected heterozygosity was 0.76. Ten loci exhibited significant departure from Hardy–Weinberg equilibrium likely due to the presence of null alleles. Sixteen of these markers cross-amplified in closely related N. nodosus, while little or no amplification was observed in three Argopecten species.

Unintended Facilitation Between Marine Consumers Generates Enhanced Mortality For Their Shared Prey, F. Joel Fodrie, Matthew D. Kenworthy, Sean P. Powers

University Faculty and Staff Publications

We manipulated predator densities and prey vulnerability to explore how interactions between two predators affect overall mortality of their shared prey. Our threemember study system included eastern oysters (Crassostrea virginica) and two of its major consumers: southern oyster drills (Stramonita haemastoma) and stone crabs (Menippe adina). Field experiments demonstrated that drills and crabs foraging together generated higher than expected oyster mortality based on each species operating independently, even though crabs also killed some drills. In subsequent laboratory trials, we experimentally mimicked the handling of oysters by foraging crabs and confirmed that crabs facilitated drills by breeching oyster valves, thereby granting …

Dinoflagellate Cysts Within Sediment Collections From The Southern Chesapeake Bay, And Tidal Regions Of The James, York, And Rappahannock Rivers, Virginia, David W. Seaborn, Harold G. Marshall

Virginia Journal of Science

The upper 2 cm of sediment core samples from 70 stations in the tidal waters of three Virginia rivers and at 23 stations in the lower Chesapeake Bay were sampled for dinoflagellate cysts. The river sediment cysts were dominated by three common bloom producing species (Heterocapsa triquetra, Scrippsiella trochoidea, and Cochlodinium polykrikoides), whereas these were in low concentration on the Chesapeake Bay sediments which contained mainly dinoflagellate cysts of neritic and oceanic taxa. The mean sediment concentrations from stations in the James, York, and Rappahannock rivers were respectively 1174.8, 536.2, and 323.6 cysts g^-1. The mean …

Influences Of The Loggerhead Sponge (Spheciospongia Vesparium) And The Vase Sponge (Ircinia Campana) On Nearshore Hard-Bottom Community Development In The Florida Keys, Scott Donahue

Biological Sciences Theses & Dissertations

Sponges, octocorals, and stony corals are the dominant sessile fauna within shallow, hard-bottom communities in the Florida Keys, FL (USA). The sponge component of these communities is not well studied and has been cyclically decimated from as early as 1844, most recently in south-central Florida Bay in 1991 and 1992, in apparent association with phytoplankton blooms. The purpose of this research was to examine ways in which sponges may contribute to the maintenance of hard-bottom communities. Specifically, I investigated: 1) the effect of sponges and physical structures on local sea floor scouring and thus the potential for maintenance of hard-bottom; …

Project Limulus: What Long-Term Mark/Recapture Studies Reveal About Horseshow Crab Population Dynamics In Long Island Sound, Mark Beekey, Jennifer Mattei

Biology Faculty Publications

Project Limulus is a long-term study of the population dynamics of the horseshoe crab population in Long Island Sound (LIS). We have tagged over 20,000 spawning adults from >20 beaches ranging from Greenwich to Stonington, CT since 1997. Cumulative recapture rates have reached 9%. On average 90% of the crabs are recaptured within a few miles of their original tag site within the first season. Between seasons, on average, 45% of crabs are recaptured within the same locality of where they were tagged. Of all recaptures, 99% of recaptured individuals are found within LIS. This past year we expanded the …

Shark Bay Prawn And Scallop Fisheries. Draft Review Report, Department Of Fisheries Western Australia

Fisheries Management Papers

In recent times, the Department of Fisheries has received representations from both sectors about the ongoing interaction of the fisheries and their respective management settings. As a result, a decision was made to comprehensively review the fisheries, taking into account matters of fishery sustainability and gear interactions, together with industry economics and market considerations. The review has also addressed research requirements to ensure an appropriate scientific basis for decision-making into the future.

Phytoplankton Productivity In The Tidal Regions Of Four Chesapeake Bay (U.S.A.) Tributaries, Kneeland K. Nesius, Harold G. Marshall, Todd A. Egerton

Virginia Journal of Science

Monthly and annual phytoplankton productivity rates of four Virginia tidal rivers were determined based on a 12-year monitoring study that included sampling stations from tidal freshwater, oligohaline, and mesohaline regions in these rivers. The mean monthly rates and range at these locations were 5.52 (Dec.) to 175.12 (Aug.) mg C m^-3 h^-1 for tidal freshwater, 12.21 (Jan.) to 149.90 (May) mg C m^-3 h^-1 in oligohaline regions, and 16.20 (Jan.) to 151.33 (May) mg C m^-3 h^-1 for the mesohaline. The estimated mean annual 12 year productivity for the different Virginia river sites in …

Negative Effect Of Zebra Mussels On Foraging And Habitat Use By Lake Sturgeon (Acipenser Fulvescens), D. J. Mccabe, Mark Beekey, A. Mazloff, I. E. Marsden

Biology Faculty Publications

1. Lake sturgeon (Acipenser fulvescens) are threatened or endangered throughout much of their range. Juvenile sturgeon utilize sandy and silty habitats extensively during their growth. Invasive zebra mussels change the nature of sandy and silty habitats because they settle on and coat the habitat with the shells of living and dead individuals. The potential impacts of this increased habitat complexity on lake sturgeon is unknown. 2. Juvenile lake sturgeon habitat choice was assessed in laboratory experiments, and zebra mussel impact on the foraging success of juvenile lake sturgeon on three different prey species was measured. 3. Sturgeon foraging on chironomids …

Fisheries Occasional Publication No. 29 - Western Rock Lobster Fishery Effects Of Fishing On The Ecosystem - Scientific Reference Group (Chairman's Report No. 3, February 2005), Department Of Fisheries, Western Australia

Fisheries Occasional Publications

The Western Rock Lobster Effects of Fishing on the Ecosystem Scientific Reference Group (the SRG) was convened jointly by the Department of Fisheries and the WA Fishing Industry Council (WAFIC). The SRG met on Tuesday 1 February 2005 at the Fremantle Sailing Club, and this document is the official report from that meeting.

Integrated Fisheries Management. Draft Allocation Report. Western Rock Lobster Resource A Discussion Paper, Integrated Fisheries Allocation Advisory Committee

Fisheries Management Papers

In this report the Committee had given a number of draft recommendations regarding the allocations of the West Coast Rock Lobster Managed Fishery. This paper allows for the public to view these allocations and put forward their submissions.

A Five Year Management Strategy For Recreational Fishing On The South Coast. The Minister For Fisheries' Decision In Response To The Final Report Of The South Coast Recreational Fishing Working Group., Jon Ford (Minister For Fisheries; The Kimberley, Pilbara And Gascoyne)

Fisheries Management Papers

After careful consideration of the South Coast Recreational Fishing Working Group’s recommendations and the wide range of issues raised in submissions, I have made my decisions in respect to the future management arrangements for recreational fishing in South Coast Region. I believe the new management arrangements which will be implemented in 1 January 2006 will go a long way to protecting recreational fishing quality and meeting the long term needs for the sustainable management of recreational fishing. I did note that some of the most pressing concerns raised during public meetings, and in submissions, related to the interaction between the …

Proposals For Community Discussion : A Quality Future For The Recreational Marron Fishery : A Five-Year Draft Strategy To Ensure The Long-Term Sustainability Of The Marron Fishery, Recreational Freshwater Fisheries Stakeholder Sub-Committee

Fisheries Management Papers

While some of the factors threatening the future of the marron fishery can be managed via traditional fisheries controls, many fall outside of the Department of Fisheries’ jurisdiction and require a ‘whole of Government’ approach to management. To help ensure a quality future for the recreational marron fishery, the Recreational Freshwater Fisheries Stakeholder Sub-committee (RFFSS) has now developed a set of draft management proposals designed to form the basis of a five-year management plan for the fishery.

A Five-Year Management Strategy For Recreational Fishing On The South Coast Of Western Australia. Final Report, South Coast Recreational Fishing Working Group.

Fisheries Management Papers

The development of this strategy represents a significant step in protecting recreational fishing quality in the South Coast Region and meeting the long-term needs for the sustainable management of recreational fishing. All recommendations contained in this report were made only after careful consideration of the submissions and issues which were raised at public meetings, along with the action needed to be taken to protect the long-term sustainability of our fish stocks.