Marine Biology Commons^™

New Perspectives On Ecological Mechanisms Affecting Coral Recruitment On Reefs, Raphael Ritson-Williams, Suzanne N. Arnold, Nicole D. Fogarty, Robert S. Steneck, Mark J. A. Vermeij, Valerie J. Paul

Marine & Environmental Sciences Faculty Articles

Coral mortality has increased in recent decades, making coral recruitment more important than ever in sustaining coral reef ecosystems and contributing to their resilience. This review summarizes existing information on ecological factors affecting scleractinian coral recruitment. Successful recruitment requires the survival of coral offspring through sequential life history stages. Larval availability, successful settlement, and post-settlement survival and growth are all necessary for the addition of new coral individuals to a reef and ultimately maintenance or recovery of coral reef ecosystems. As environmental conditions continue to become more hostile to corals on a global scale, further research on fertilization ecology, connectivity, …

Advances In The Study Of Marine Mammal Predator-Prey Interactions: A Novel Real-Time Visualization Of Independently Collected Echosounder Data Using Geozui4d, Roland J. Arsenault, Ari S. Friedlaender, Elliott L. Hazen, Colin Ware, David N. Wiley

Center for Coastal and Ocean Mapping

No abstract provided.

Influence Of Irradiance And Iron On The Growth Of Colonial Phaeocystic Antarctica: Implications For Seasonal Bloom Dynamics In The Ross Sea, Antarctica, Nathan S. Garcia, Peter N. Sedwick, Giacomo R. Ditullio

OES Faculty Publications

Laboratory culture experiments were used to investigate the growth rate of colonial Phaeocystis anarctica as a function of irradiance and dissolved iron concentration. The experiments were conducted with a P. antarctica strain isolated from the southern Ross Sea, Antarctica, and made use of natural, low-iron (P. antarctica attained an average maximum cell-specific growth rate of 0.37 d^-1at an irradiance of 68 μE m^-2s^-1, above which growth rates decreased to 0.27 d^-1 at an irradiance of 314 μE m^-2s^-1. The dependence of growth rate on ambient dissolved iron concentration was …

Thin Layer Formation During Runaway Stratification In The Tidally Dynamic San Francisco Estuary, Alexander B. Bochdansky, Stephen M. Bollens

OES Faculty Publications

During the course of a year, we repeatedly collected high-resolution vertical fluorometer data timed to coincide with a specific state during the tidal cycle. The time (end of the ebb during neap tide) and the location (a deep channel half-way between the Golden Gate and the point of tidally averaged bottom salinity of 2 psu) were chosen with the goal to observe runaway stratification. We consistently found at least one pronounced chlorophyll peak in the water column; however, the vertical location of these peaks varied within three types including surface, bottom and subsurface maxima. Our results showed that heterogeneity of …

Spatial Variation In Otolith Chemistry Of Atlantic Croaker Larvae In The Mid-Atlantic Bight, Jason J. Schaffler, Christian S. Reiss, Cynthia M. Jones

OES Faculty Publications

Larval Atlantic croaker Micropogonias undulatus (1 to 7 mm in standard length) were collected on the east coast of the United States from North Carolina to Delaware during 2000. We defined 3 water-mass boundaries for potential groups of spawning Atlantic croaker using temperature and salinity measured at each sampling station. We tested the hypothesis that distinct otolith chemistries existed among 3 groups of larval Atlantic croaker collected from these water masses using solution-based inductively coupled plasma-mass spectrometry. Multivariate analysis of variance indicated that otolith chemistry differed significantly among water masses. Using a quadratic discriminant function, we were able to correctly …

Patterns Of Larval Atlantic Croaker Ingress Into Chesapeake Bay, Usa, Jason J. Schaffler, Christian S. Reiss, Cynthia M. Jones

OES Faculty Publications

We compared ingress patterns of Atlantic croaker Micropogonias undulatus larvae into Chesapeake Bay, USA, with published ingress patterns through barrier island inlets, the accepted model for larval fish ingress. This model asserts that larvae ingress on night flood tides at the flooddominated side of the inlet and at all depths. At the Chesapeake Bay mouth and in the adjacent coastal waters, we compared the distribution of abundance, size, age, and growth rates of croaker prior to ingress, In contrast to the barrier island inlet model, croaker larvae were more abundant at depth than closer to the surface regardless of location. …

Cross-Basin Comparison Of Phosphorus Stress And Nitrogen Fixation In Trichodesmium, Annette M. Hynes, P. Dreux Chappell, Sonya T. Dyhrman, Scott C. Doney, Eric A. Webb

OES Faculty Publications

We investigated the phosphorus (P) status and N₂ fixation rates of Trichodesmium populations from the North Pacific, western South Pacific, and western North Atlantic. Colonies of Trichodesmium were collected and analyzed for endogenous alkaline phosphatase (AP) activity using enzyme-labeled fluorescence ( ELF) and for nitrogenase activity using acetylene reduction. AP hydrolyzes dissolved inorganic phosphate (DIP) from dissolved organic phosphorus and is active in Trichodesmium colonies experiencing P stress. Across multiple stations in the subtropical North and South Pacific, there was low to moderate ELF labeling in Trichodesmium, although labeling was present in other taxa. In contrast, Trichodesmium ELF …

Winter 2009, Nsu Oceanographic Center

Currents

No abstract provided.

Is Seagrass An Important Nursery Habitat For The Caribbean Spiny Lobster, Panulirus Argus, In Florida?, Donald C. Behringer, Mark J. Butler Iv, William Herrnkind, John H. Hunt, Charles A. Acosta, William C. Sharp

Biological Sciences Faculty Publications

Caribbean spiny lobster (Panulirus argus) settle preferentially in macroalgal-covered hard-bottom habitat, but seagrass is more prevalent in Florida (United States) and the Caribbean, so even low settlement of lobsters within seagrass could contribute substantially to recruitment if post-settlement survival and growth were high. We tested the role of seagrass and hard-bottom habitats for P. argus recruitment in three ways. We first explored possible density-dependent regulation of early benthic juvenile lobster survival within cages deployed in seagrass and hard-bottom habitats. Second, we compared settlement and survival of P. argus in both habitats, by comparing the recovery of microwire-tagged early …

Regional Characterisation Of Hard-Bottom Nursery Habitat For Juvenile Caribbean Spiny Lobster (Panulirus Argus) Using Rapid Assessment Techniques, Rodney D. Bertelsen, Mark J. Butler Iv, William F. Herrnkind, John H. Hunt

Biological Sciences Faculty Publications

Shallow, hard-bottom habitat constitutes approximately 30% of the coastal waters of south Florida, United States, yet it is a chronically understudied feature of the marine seascape in this region. In this study, we characterised the general biogeographic and structural features of shallow benthic hard-bottom communities in the Florida Keys, and related those to the abundance of juvenile Caribbean spiny lobster (Panulirus argus), the target of one of Florida's most economically valuable fisheries. We used rapid assessment techniques to survey more than 100 hard-bottom sites in the Florida Keys to estimate the percentage bottom coverage of vegetation (seagrass and …

Understanding How Disease And Environment Combine To Structure Resistance In Estuarine Bivalve Populations, Eileen E. Hofmann, David Bushek, Susan E. Ford, Ximing Guo, Dale Haidvogel, Dennis Hedgecock, John M. Klinck, Coren Milbury, Diego Narvaez, Eric Powell, Yongping Wang, Zhiren Wang, Liusuo Zhang

CCPO Publications

Delaware Bay oyster (Crassostrea virginica) populations are influenced by two lethal parasites that cause Dermo and MSX diseases. As part of the US National Science Foundation Ecology of Infectious Diseases initiative, a program developed for Delaware Bay focuses on understanding how oyster population genetics and population dynamics interact with the environment and these parasites to structure he host populations, and how these interactions might modified by climate change. Laboratory and field studies undertaken during this program include identifying genes related to MSX and Dermo disease resistance, potential regions for refugia and the mechanisms that allow them to exist, …

The Epidemiological Status Of Pav1, And The Effects Of Infection On Caribbean Spiny Lobster (Panulirus Argus) Condition, Olfaction, And Predation Risk, Donald C. Behringer, Mark J. Butler Iv, Jeffrey D. Shields

Biological Sciences Faculty Publications

No abstract provided.

Patterns Of Spiny Lobster (Panulirus Argus) Postlarval Recruitment In The Carribbean: A Crtr Project, Mark J. Butler Iv, Angela M. Mojica, Eloy Sosa-Cordero, Marines Millet, Paul Sanchez-Navarro, Miguel A. Maldonado, Juan Posada, Bladimir Rodriguez, Carlos M. Rivas, Adrian Oviedo, Marcio Arrone, Martha Prada, Nick Bach, Nilda Jimenez, Maria Del Carmen Garcia-Rivas, Kirah Forman, Donald C. Behringer Jr., Thomas Matthews, Claire Paris, Robert Cowen

Biological Sciences Faculty Publications

As part of the Coral Reef Targeted Research (CRTR) Program, a partnership between the Global Environment Facility and the World Bank, our research team examined the recruitment patterns of Caribbean spiny lobster (Panulirus argus) postlarvae among regions in the Caribbean, with a particular focus on Mesoamerica. Our goal was to collect comparable information on postlarval supply among regions and to provide data to test predictions of connectivity generated from a coupled biophysical oceanographic model of lobster larval dispersal. Here we present the results of the postlarval recruitment monitoring program. We monitored the catch of postlarvae on Witham-style collectors …

Phytoplankton Blooms: Their Occurence And Composition Within Virginia's Tidal Tributaries, Harold G. Marshall, Todd A. Egerton

Biological Sciences Faculty Publications

Sporadic algal bloom development within a 10 year monitoring program in Virginia tidal tributaries of Chesapeake Bay is reviewed. These blooms were common events, characteristically producing a color signature to the surface water, typically short lived, occurring mainly from spring into autumn throughout different salinity regions of these rivers, and were produced primarily by dinoflagellates. The abundance threshold levels that would identify bloom status from a non-bloom presence were species specific, varied with the taxon's cell size, and ranged from ca. 10 to 10(4) cells mL(-1). Among the most consistent sporadic bloom producers were the dinoflagellates Akashiwo sanguinea, Cochlodinium …

Lidar-Derived Benthic Habitat Maps Enable The Quantification Of Potential Dredging Impacts To Coral Reef Ecosystems, Brian K. Walker, Richard E. Dodge, David S. Gilliam

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

An essential component to the analysis of ecosystem services is to characterize and define the major habitats within the area of interest. Aerial photography and/or satellite imagery coupled with geographic information systems (GIS) are frequently used to identify and quantify habitats in open terrestrial ecosystems. However, it is more difficult to successfully apply this methodology to deeper, <20 m, underwater environments. Light detection and ranging (LIDAR), a relatively new remote sensing technology that provides detailed bathymetry, can be used when adequate imagery is not available. This study uses LIDAR as the basis to characterize various benthic habitats in a coral reef ecosystem in order to quantify the habitats for a Habitat Equivalency Analysis (HEA) related to planned dredging activities to expand the Port Everglades entrance channel, Broward County, FL. As part of a regional mapping effort, marine benthic habitats were characterized for Broward County, FL. A mosaic of interpolated, sunshaded, laser bathymetry data served as the foundation upon which acoustic ground discrimination, limited subbottom profiling and aerial photography, and groundtruthing data were added in a GIS to aid in interpretation of benthic habitats. Expert-driven visual interpretation outlined geomorphological features in the LIDAR data at a scale of 1:6000 with a minimum mapping unit of 1 acre. The map of Broward County yielded a high overall accuracy of 89.6%. To quantify the potential dredging impacts, the habitat layer was clipped in GIS to the boundaries of anticipated direct and indirect impacts of the proposed project. Then the area of each clipped polygon was totaled for each habitat by impact type. HEA and Florida’s Uniform Mitigation Assessment Method (UMAM) were performed using these areas. This work would not have been possible using satellite imagery or aerial photography alone and illustrates the capability of relatively new remote sensing technologies to aid in the definition and quantification of habitats for ecosystem service analyses.

On The Movement Of Beluga Whales In Cook Inlet, Alaska: Simulations Of Tidal And Environmental Impacts Using A Hydrodynamic Inundation Model, Tal Ezer, Roderick Hobbs, Lie-Yauw Oey

CCPO Publications

The population of beluga whales in Cook Inlet, Alaska, is in decline, and since 2000 these whales have been under consideration for designation as "endangered" under the Endangered Species Act (and were placed on the list in October 2008, just before this article went to press). In order to study environmental and hydrodynamic impacts on the belugas' movements and survival in the unique habitat of the inlet, a three-dimensional ocean circulation and inundation model is combined with satellite-tracked beluga whale data. Model-wale data comparisons from two whale paths during a five-day period (september 17-21, 2000) covering 10 tidal cycles suggest …

Fisheries Occasional Publication No.72 - Western Rock Lobster Ecological Effects Of Fishing Research Plan., Rhys Brown

Fisheries Occasional Publications

The commercial West Coast Rock Lobster Fishery (WCRLF) targets the western rock lobster (WRL), Panulirus cygnus, averaging approximately 10,000 tonnes of lobsters each year. Currently approximately 450 to 500 boats operate in the Fishery in waters ranging from 5 m to 200 m depth adjacent to the Western Australian coast and stretching from Cape Leeuwin in the south to Shark Bay in the north. The Fishery is managed by the Department of Fisheries (DoF) in Western Australia, using an input control system designed to constrain exploitation/fishing effort and deliver sustainable catches. The annual value of the catch is estimated at …

North Shore Bays Benthic Mapping: Groundtruth Studies., Robert M. Cerrato, Lee Holt

School of Marine & Atmospheric Sciences Faculty Publications

We combined high-resolution remote sensing techniques with detailed study of the physical and faunal characteristics at point locations in different seafloor environments within the Oyster Bay- Cold Spring Harbor Complex, the Huntington-Northport Bay Complex, and Port Jefferson Harbor, including Conscience Bay. High-resolution backscatter and bathymetric maps created by side scan and multibeam sonar surveys were used to classify the sea bed into provinces. Samples for macrofauna and sediment properties were collected within each province to provide "ground truth" for the acoustic maps. Oyster Bay, Huntington Harbor, and Port Jefferson Harbor were sampled at 40, 38, and 50 locations, respectively, with …

North Shore Bays Benthic Mapping: Groundtruth Studies Gis Data, Robert M. Cerrato, Lee Holt

SoMAS Research Data

We combined high-resolution remote sensing techniques with detailed study of the physical and faunal characteristics at point locations in different seafloor environments within the Oyster Bay- Cold Spring Harbor Complex, the Huntington-Northport Bay Complex, and Port Jefferson Harbor, including Conscience Bay. High-resolution backscatter and bathymetric maps created by side scan and multibeam sonar surveys were used to classify the seabed into provinces. Samples for macrofauna and sediment properties were collected within each province to provide "ground truth" for the acoustic maps. Oyster Bay, Huntington Harbor, and Port Jefferson Harbor were sampled at 40, 38, and 50 locations, respectively, with two …

Live Release Of A Bigeye Sand Tiger Odontaspis Noronhai (Elasmobranchii: Lamniformes) In The Western North Atlantic Ocean, David W. Kerstetter, Mae Taylor

Marine & Environmental Sciences Faculty Articles

No abstract provided.

Coral Reef Restoration And Mitigation In Florida And Beyond, Jocelyn Karazsia, Tom Moore, James Byrne, David S. Gilliam, John Hunt

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

No abstract provided.

Fisheries Research Report No. 181 - Developing Long-Term Indicators For The Sub-Tidal Embayment Communities Of Cockburn Sound, Danielle Johnston, C. Wakefield, A Sampey, J Fromont, D C. Harris

Fisheries Research Reports

Swan Catchment Council Project – 01-0506 T 2006 – 2008 program

The geomorphology of Cockburn Sound is unique to the lower west coast of Australia due to the relative paucity of sheltered nearshore marine embayments along this coastline. Numerous studies on many of the commercially and/or recreationally important species that inhabit Cockburn Sound have demonstrated that for many of them this marine embayment constitutes an integral part of their life history. Since the commencement of industrial and urban development in the mid 1950s, in the waters and along the shores of Cockburn Sound, the marine fauna utilising this area have …

Fall 2008, Nsu Oceanographic Center

Currents

No abstract provided.

Using Moored Arrays And Hyperspectral Aerial Imagery To Develop Nutrient Criteria For New Hampshire's Estuaries, J. Ru Morrison, Thomas K. Gregory, Shachak Pe'eri, William H. Mcdowell, Philip Trowbridge

PREP Reports & Publications

Increasing nitrogen concentrations and declining eelgrass beds in Great Bay, NH are clear indicators of impending problems for the state’s estuaries. A workgroup established in 2005 by the NH Department of Environmental Services and the NH Estuaries Project (NHEP) adopted eelgrass survival as the water quality target for nutrient criteria development for NH’s estuaries. In 2007, the NHEP received a grant from the U.S. Environmental Protection Agency to collect water quality information including that from moored sensors and hyper-spectral imagery data of the Great Bay Estuary. Data from the Great Bay Coastal Buoy, part of the regional Integrated Ocean Observing …

Critical Review Of The Literature On Marine Mammal Population Modelling, Edward O. Keith

Marine & Environmental Sciences Faculty Reports

A comprehensive literature review and modeling effort have been conducted in order to determine which vital rates are most important to determining the growth and sustainability of marine mammal populations. Also addressed are the impacts of life-history, ecological, and genetic variation on vital rates and population sustainability and how much each vital parameter can change before a change in population trend would be expected. Additionally, the influence of ecological energetics and foraging strategies on vital rates and their limits of sustainable change are examined, and the nature of how an increase in sound in the marine environment might influence marine …

Mapping Coral Reef Habitats In Southeast Florida Using A Combined Technique Approach, Brian K. Walker, Bernhard Riegl, Richard E. Dodge

Marine & Environmental Sciences Faculty Articles

To create maps of nearshore benthic habitats of Broward County, Florida, from 0 to 35 m depth, we combined laser bathymetry, acoustic ground discrimination, subbottom profiling, and aerial photography data in a geographic information system (GIS). A mosaic of interpolated, sun-shaded, laser bathymetry data served as the foundation upon which acoustic ground discrimination, limited subbottom profiling and aerial photography, and groundtruthing data aided in interpretation of habitats. Mapping criteria similar to NOAA biogeographic Caribbean mapping were used to allow for a comparable output. Expert-driven visual interpretation outlined geomorphological features at a scale of 1 : 6000 with a minimum mapping …

Summer 2008, Nsu Oceanographic Center

Currents

No abstract provided.

Deep-Pelagic Fishes And The Mid-Atlantic Ridge: Interactions And Vectoring Of Gelatinous Carbon To Higher Trophic Levels?, Tracey Sutton, F. M. Porteiro, C. I. H. Anderson, J. Horne

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The assemblage structure and vertical distribution of deep-pelagic fishes relative to a mid-ocean ridge system is described from an acoustic and discrete-depth trawling survey conducted as part of the international Census of Marine Life field project MAR-ECO. A survey along the Mid-Atlantic Ridge (MAR), covering the full depth range (0 to >3000 m) with a combination of gear types, was conducted to understand the role of the pelagic fauna in ecosystem dynamics. A total of 205 fish species were collected by midwater sampling. Depth was by far the primary assemblage composition determinant, with ridge section secondary. The dominant ichthyofaunal component …

A Comparison Of Scleractinian Coral Abundance Between Natural And Artificial Substrata In A High-Latitude Environment Off Broward County, Florida, Usa, Deron James Bauer

HCNSO Student Theses and Dissertations

The Dania Beach Erojacks Artificial Reef was deployed off the coast of Broward County, Florida on December 31, 1967 as a way to help combat beach erosion. Over the last forty years, the linear pile of concrete hexapods has become an important habitat, for scleractinian corals, octocorals, algae, crustaceans, mollusks, and fish. This study focuses on the density and size of the scleractinian corals found on this artificial reef and how it compares to that of the nearby natural reef. In addition, the impact of two hurricanes on the shallow portion of the artificial reef was documented. In the 2-year …

A Model Framework For Predicting Reef Fish Distributions Across The Seascape Using Gis Topographic Metrics And Benthic Habitat Associations, Brian K. Walker

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Increased topographic complexity has been linked to increased species diversity and/or abundance in many ecological communities, including coral reefs. Several topographic metrics can be measured remotely in GIS using high resolution bathymetry, including elevation, surface rugosity, and seafloor volume within specified areas. Statistical relationships between these data and organismal distributions within mapped habitats can be used to make predictions across the entire bathymetric dataset. In this study a model framework is presented which utilizes statistically significant relationships between reef fish abundance and species richness and GIS topographic complexity measurements for samples within similar benthic habitats to create GIS-based prediction maps …