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Articles 1471 - 1500 of 2805

Full-Text Articles in Marine Biology

Sponge Distribution And The Presence Of Photosymbionts In Moorea, French Polynesia, Christopher J. Freeman, Cole Easson Mar 2016

Sponge Distribution And The Presence Of Photosymbionts In Moorea, French Polynesia, Christopher J. Freeman, Cole Easson

Marine & Environmental Sciences Faculty Articles

Photosymbionts play an important role in the ecology and evolution of diverse host species within the marine environment. Although sponge-photosymbiont interactions have been well described from geographically disparate sites worldwide, our understanding of these interactions from shallow water systems within French Polynesia is limited. We surveyed diverse habitats around the north coast of Moorea, French Polynesia and screened sponges for the presence of photosymbionts. Overall sponge abundance and diversity were low, with <1% cover and only eight putative species identified by 28S barcoding from surveys at 21 sites. Of these eight species, seven were found predominately in shaded or semi-cryptic habitats under overhangs or within caverns. Lendenfeldia chondrodeswas the only species that supported a high abundance of photosymbionts and was also the only species found in exposed, illuminated habitats. Interestingly, L. chondrodes was …

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Distribution, Abundance And Movement Of Fish Among Seagrass And Mangrove Habitats In Biscayne Bay, Patrick C. Goebel Mar 2016

Distribution, Abundance And Movement Of Fish Among Seagrass And Mangrove Habitats In Biscayne Bay, Patrick C. Goebel

HCNSO Student Theses and Dissertations

Inshore tropical and subtropical estuaries harbor a relatively high abundance and diversity of organisms. Specifically within estuaries, mangrove and seagrass habitats provide shelter and food for a plethora of organisms, through some or all their life histories. Given the biological connection between offshore coral reefs and coastal estuaries, there is a critical need to understand the underlying processes that determine distribution and abundance patterns within mangrove-seagrass habitats. The predatory fish assemblage within the mangrove and seagrass beds of Biscayne Bay, Florida (USA), was examined over 24-hr. time periods along a distance and habitat gradient from the mangrove edge and nearshore …

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Sustainable Whale-Watching For The Philippines: A Bioeconomic Model Of The Spinner Dolphin (Stenella Longirostris), Allison Jenny Santos Mar 2016

Sustainable Whale-Watching For The Philippines: A Bioeconomic Model Of The Spinner Dolphin (Stenella Longirostris), Allison Jenny Santos

HCNSO Student Theses and Dissertations

Whale-watching provides economic opportunities worldwide and particularly proliferates in developing countries, such as the Philippines. The sustainability of whale-watching is increasingly debated as these activities also negatively impact cetaceans through changes in behavior, communication, habitat use, morbidity, mortality, and life-history parameters. This study evaluated the total annual cost, revenue, and profit of whale-watching operators in Bais, Philippines, and predicted the changes in the population for spinner dolphin Stenella longirostris with varying levels of whale-watching effort. Total revenue was 3,805,077 PHP ($92,478 USD) while total cost was 5,649,094 PHP ($137,294 USD) with a discount rate of ten percent. The total annual …

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Preferential Depletion Of Zinc Within Costa Rica Upwelling Dome Creates Conditions For Zinc Co-Limitation Of Primary Production, P. Dreux Chappell, Jagruti Vedmati, Karen E. Selph, Heather A. Cyr, Bethany D. Jenkins, Michael R. Landry, James W. Moffett Mar 2016

Preferential Depletion Of Zinc Within Costa Rica Upwelling Dome Creates Conditions For Zinc Co-Limitation Of Primary Production, P. Dreux Chappell, Jagruti Vedmati, Karen E. Selph, Heather A. Cyr, Bethany D. Jenkins, Michael R. Landry, James W. Moffett

OES Faculty Publications

The Costa Rica Dome (CRD) is a wind-driven feature characterized by high primary production and an unusual cyanobacterial bloom in surface waters. It is not clear whether this bloom arises from top-down or bottom-up processes. Several studies have argued that trace metal geochemistry within the CRD contributes to the composition of the phytoplankton assemblages, since cyanobacteria and eukaryotic phytoplankton have different transition metal requirements. Here, we report that total dissolved zinc (Zn) is significantly depleted relative to phosphate (P) and silicate (Si) within the upper water column of the CRD compared with other oceanic systems, and this may create conditions …

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Marine Disease Impacts, Diagnosis, Forecasting, Management And Policy, Kevin D. Lafferty, Eileen E. Hofmann Mar 2016

Marine Disease Impacts, Diagnosis, Forecasting, Management And Policy, Kevin D. Lafferty, Eileen E. Hofmann

CCPO Publications

(First paragraph) As Australians were spending millions of dollars in 2014 to remove the coraleating crown of thorns sea star from the Great Barrier Reef, sea stars started washing up dead for free along North America’s Pacific Coast. Because North American sea stars are important and iconic predators in marine communities, locals and marine scientists alike were alarmed by what proved to be the world’s most widespread marine mass mortality in geographical extent and species affected, especially given its mysterious cause. Investigative research using modern diagnostic techniques implicated a never-before-seen virus [1]. The virus inspired international attention to marine diseases, …

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Pharmaceutical Contaminants As Stressors On Rocky Intertidal And Estuarine Organisms: A Case Study Of Fluoxetine, Joseph Richard Peters Mar 2016

Pharmaceutical Contaminants As Stressors On Rocky Intertidal And Estuarine Organisms: A Case Study Of Fluoxetine, Joseph Richard Peters

Dissertations and Theses

Contaminants such as pharmaceuticals are of increasing concern due to their ubiquitous use and persistence in surface waters worldwide. Limited attention has been paid to the effects of pharmaceuticals on marine life, despite widespread detection of these contaminants in the marine environment. Of the existing studies, the majority assess the negative effects of pharmaceuticals over an exposure period of 30 days or less and focus on cellular and subcellular biomarkers. Longer studies are required to determine if chronic contaminant exposure poses risks to marine life at environmentally relevant concentrations. Also scarce in the literature is examination of whole organism effects …

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Synchronicity Between Ice Retreat And Phytoplankton Bloom In Circum‐Antarctic Polynyas, Yun Li, Rubao Ji, Meibing Jin, Julienne Stroeve Feb 2016

Synchronicity Between Ice Retreat And Phytoplankton Bloom In Circum‐Antarctic Polynyas, Yun Li, Rubao Ji, Meibing Jin, Julienne Stroeve

Marine Science Faculty Publications

Phytoplankton in Antarctic coastal polynyas has a temporally short yet spatially variant growth window constrained by ice cover and day length. Using 18‐year satellite measurements (1997–2015) of sea ice and chlorophyll concentrations, we assessed the synchronicity between the spring phytoplankton bloom and light availability, taking into account the ice cover and the incident solar irradiance, for 50 circum‐Antarctic coastal polynyas. The synchronicity was strong (i.e., earlier ice‐adjusted light onset leads to earlier bloom and vice versa) in most of the western Antarctic polynyas but weak in a majority of the eastern Antarctic polynyas. The west‐east asymmetry is related to sea …

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Effects Of Elevated Pco2 And Irradiance On Growth, Photosynthesis And Calcification In Halimeda Discoidea, K. E. Peach, M. S. Koch, Patricia Blackwelder Feb 2016

Effects Of Elevated Pco2 And Irradiance On Growth, Photosynthesis And Calcification In Halimeda Discoidea, K. E. Peach, M. S. Koch, Patricia Blackwelder

Marine & Environmental Sciences Faculty Articles

Ocean acidification (OA) effects on photophysiology and calcification were examined in Halimeda discoidea, a calcifying macroalga that produces tropical reef sediments. Photosynthetic parameters, including maximum photosynthetic rate (Pmax), photosynthetic efficiency (α) and compensating irradiance (Ic) were determined in short-term assays on live thalli after a 10 d exposure to 4 levels of CO2 partial pressures (pCO2; 491, 653, 982 and 1201 µatm) under saturating (300 µmol photons m-2 s-1) and sub-saturating (90 µmol photons m-2 s-1) irradiance in an aquaria study. Morphology …

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On The Nature Of The Frontal Zone Of The Choctawhatchee Bay Plume In The Gulf Of Mexico, K. D. Huguenard, D. J. Bogucki, D. G. Ortiz-Suslow, N. J. M. Laxague, J. H. Macmahan, T. M. Ozgokmen, Brian K. Haus, A. J. H. M. Reniers, J. Hargrove, Alexander Soloviev, H. Graber Feb 2016

On The Nature Of The Frontal Zone Of The Choctawhatchee Bay Plume In The Gulf Of Mexico, K. D. Huguenard, D. J. Bogucki, D. G. Ortiz-Suslow, N. J. M. Laxague, J. H. Macmahan, T. M. Ozgokmen, Brian K. Haus, A. J. H. M. Reniers, J. Hargrove, Alexander Soloviev, H. Graber

Marine & Environmental Sciences Faculty Articles

River plumes often feature turbulent processes in the frontal zone and interfacial region at base of the plume, which ultimately impact spreading and mixing rates with the ambient coastal ocean. The degree to which these processes govern overall plume mixing is yet to be quantified with microstructure observations. A field campaign was conducted in a river plume in the northeast Gulf of Mexico in December 2013, in order to assess mixing processes that could potentially impact transport and dispersion of surface material near coastal regions. Current velocity, density, and Turbulent Kinetic Energy Values, ε, were obtained using an Acoustic …

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Spectral Sensitivity, Spatial Resolution And Temporal Resolution And Their Implications For Conspecific Signalling In Cleaner Shrimp, Eleanor M. Caves, Tamara M. Frank, Sonke Johnsen Feb 2016

Spectral Sensitivity, Spatial Resolution And Temporal Resolution And Their Implications For Conspecific Signalling In Cleaner Shrimp, Eleanor M. Caves, Tamara M. Frank, Sonke Johnsen

Marine & Environmental Sciences Faculty Articles

Cleaner shrimp (Decapoda) regularly interact with conspecifics and client reef fish, both of which appear colourful and finely patterned to human observers. However, whether cleaner shrimp can perceive the colour patterns of conspecifics and clients is unknown, because cleaner shrimp visual capabilities are unstudied. We quantified spectral sensitivity and temporal resolution using electroretinography (ERG), and spatial resolution using both morphological (inter-ommatidial angle) and behavioural (optomotor) methods in three cleaner shrimp species: Lysmata amboinensis,Ancylomenes pedersoni and Urocaridella antonbruunii. In all three species, we found strong evidence for only a single spectral sensitivity peak of (mean±s.e.m.) 518±5, 518±2 and …

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Surfactant-Associated Bacteria In The Near-Surface Layer Of The Ocean, Naoko Kurata, Katie E. Vella, Bryan Hamilton, Mahmood S. Shivji, Alexander Soloviev, Silvia Matt, Aurelien Tartar, William Perrie Jan 2016

Surfactant-Associated Bacteria In The Near-Surface Layer Of The Ocean, Naoko Kurata, Katie E. Vella, Bryan Hamilton, Mahmood S. Shivji, Alexander Soloviev, Silvia Matt, Aurelien Tartar, William Perrie

Marine & Environmental Sciences Faculty Articles

Certain marine bacteria found in the near-surface layer of the ocean are expected to play important roles in the production and decay of surface active materials; however, the details of these processes are still unclear. Here we provide evidence supporting connection between the presence of surfactant-associated bacteria in the near-surface layer of the ocean, slicks on the sea surface, and a distinctive feature in the synthetic aperture radar (SAR) imagery of the sea surface. From DNA analyses of the in situ samples using pyrosequencing technology, we found the highest abundance of surfactant-associated bacterial taxa in the near-surface layer below the …

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Comparative Analysis Of Xenorhabdus Koppenhoeferi Gene Expression During Symbiotic Persistence In The Host Nematode, Ruisheng An, Parwinder Grewal Jan 2016

Comparative Analysis Of Xenorhabdus Koppenhoeferi Gene Expression During Symbiotic Persistence In The Host Nematode, Ruisheng An, Parwinder Grewal

School of Earth, Environmental, & Marine Sciences Faculty Publications

Species of Xenorhabdus and Photorhabdus bacteria form mutualistic associations with Steinernema and Heterorhabditis nematodes, respectively and serve as model systems for studying microbe-animal symbioses. Here, we profiled gene expression of Xenorhabdus koppenhoeferi during their symbiotic persistence in the newly formed infective juveniles of the host nematode Steinernema scarabaei through the selective capture of transcribed sequences (SCOTS). The obtained gene expression profile was then compared with other nematode-bacteria partnerships represented by Steinernema carpocapsae-Xenorhabdus nematophila and Heterorhabditis bacteriophora-Photorhabdus temperata. A total of 29 distinct genes were identified to be up-regulated and 53 were down-regulated in X. koppenhoeferi while in S. scarabaei infective …

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Marine Ecoregion And Deepwater Horizon Oil Spill Affect Recruitment And Population Structure Of A Salt Marsh Snail, Steven C. Pennings, Scott Zengel, Jacob Oehrig, Merryl Alber, T. Dale Bishop, Donald R. Deis, Donna Devlin, A. Randall Hughes, John J. Hutchens, Jr., Whitney M. Kiehn, Caroline R. Mcfarlin, Clay L. Montague, Sean P. Powers, C. Edward Proffitt, Nicholle Rutherford, Camille L. Stagg, Keith Walters Jan 2016

Marine Ecoregion And Deepwater Horizon Oil Spill Affect Recruitment And Population Structure Of A Salt Marsh Snail, Steven C. Pennings, Scott Zengel, Jacob Oehrig, Merryl Alber, T. Dale Bishop, Donald R. Deis, Donna Devlin, A. Randall Hughes, John J. Hutchens, Jr., Whitney M. Kiehn, Caroline R. Mcfarlin, Clay L. Montague, Sean P. Powers, C. Edward Proffitt, Nicholle Rutherford, Camille L. Stagg, Keith Walters

University Faculty and Staff Publications

Marine species with planktonic larvae often have high spatial and temporal variation in recruitment that leads to subsequent variation in the ecology of benthic adults. Using a combination of published and unpublished data, we compared the population structure of the salt marsh snail, Littoraria irrorata, between the South Atlantic Bight and the Gulf Coast of the United States to infer geographic differences in recruitment and to test the hypothesis that the Deepwater Horizon oil spill led to widespread recruitment failure of L. irrorata in Louisiana in 2010. Size-frequency distributions in both ecoregions were bimodal, with troughs in the distributions consistent …

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Long-Term, High Frequency In Situ Measurements Of Intertidal Mussel Bed Temperatures Using Biomimetic Sensors, Brian Helmuth, Francis Choi, Allison Matzelle, Jessica Torossian, Scott Morello, K.A.S. Mislan, Lauren Yamane, Denise Strickland, P. Szathmary, Sarah Gilman, Alyson Tockstein, Thomas Hilbish, Michael Burrows, Anne Marie Power, Elizabeth Gosling, Nova Mieszkowska, Christopher Harley, Michael Nishizaki, Emily Carrington, Bruce Menge, Laura Petes, Melissa Foley, Angela Johnson, Megan Poole, Mae Noble, Erin Richmond, Matt Robart, Jonathan Robinson, Jerod Sapp, Jackie Sones, Bernardo Broitman, Mark Denny, Katharine Mach, Luke P. Miller, Michael O'Donnell, Philip Ross, Gretchen Hofmann, Mackenzie Zippay, Carol Blanchette, J. Macfarlan, Eugenio Carpizo-Ituarte, Benjamin Ruttenberg, Carlos Peña Mejía, Christopher Mcquaid, Justin Lathlean, Cristián Monaco, Katy Nicastro, Gerardo Zardi Jan 2016

Long-Term, High Frequency In Situ Measurements Of Intertidal Mussel Bed Temperatures Using Biomimetic Sensors, Brian Helmuth, Francis Choi, Allison Matzelle, Jessica Torossian, Scott Morello, K.A.S. Mislan, Lauren Yamane, Denise Strickland, P. Szathmary, Sarah Gilman, Alyson Tockstein, Thomas Hilbish, Michael Burrows, Anne Marie Power, Elizabeth Gosling, Nova Mieszkowska, Christopher Harley, Michael Nishizaki, Emily Carrington, Bruce Menge, Laura Petes, Melissa Foley, Angela Johnson, Megan Poole, Mae Noble, Erin Richmond, Matt Robart, Jonathan Robinson, Jerod Sapp, Jackie Sones, Bernardo Broitman, Mark Denny, Katharine Mach, Luke P. Miller, Michael O'Donnell, Philip Ross, Gretchen Hofmann, Mackenzie Zippay, Carol Blanchette, J. Macfarlan, Eugenio Carpizo-Ituarte, Benjamin Ruttenberg, Carlos Peña Mejía, Christopher Mcquaid, Justin Lathlean, Cristián Monaco, Katy Nicastro, Gerardo Zardi

Faculty Publications, Biological Sciences

At a proximal level, the physiological impacts of global climate change on ectothermic organisms are manifest as changes in body temperatures. Especially for plants and animals exposed to direct solar radiation, body temperatures can be substantially different from air temperatures. We deployed biomimetic sensors that approximate the thermal characteristics of intertidal mussels at 71 sites worldwide, from 1998-present. Loggers recorded temperatures at 10–30 min intervals nearly continuously at multiple intertidal elevations. Comparisons against direct measurements of mussel tissue temperature indicated errors of ~2.0–2.5 °C, during daily fluctuations that often exceeded 15°–20 °C. Geographic patterns in thermal stress based on biomimetic …

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Vision And Bioluminescence In The Deep-Sea Benthos, Tamara M. Frank, Sonke Johnsen, Heather D. Bracken-Grissom, Charles Messing, Edith A. Widder Jan 2016

Vision And Bioluminescence In The Deep-Sea Benthos, Tamara M. Frank, Sonke Johnsen, Heather D. Bracken-Grissom, Charles Messing, Edith A. Widder

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

During a NOAA-OER funded research cruise, novel collecting techniques were used to collect live, deep-sea benthic animals for studies of bioluminescence and vision. True color images and emission spectra of bioluminescence were obtained from a number of species, including the spiral octocoral Iridogorgia sp., the sea fan Chrysogorgia sp., the sea pen Umbellula sp., and the caridean shrimp Heterocarpusoryx. Electrophysiological studies were conducted on 3 species of decapod crustaceans collected with methods that limited light damage to their photoreceptors. The caridean shrimp, Bathypalaemonella, collected from 1920m, was always found in association with the bioluminescent spiral octocoral Iridogorgia. While …

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A Novel Approach Reveals High Zooplankton Standing Stock Deep In The Sea, Alexander Vereshchaka, Galina Abyzova, Anastasia Lunina, Eteri Musaeva, Tracey Sutton Jan 2016

A Novel Approach Reveals High Zooplankton Standing Stock Deep In The Sea, Alexander Vereshchaka, Galina Abyzova, Anastasia Lunina, Eteri Musaeva, Tracey Sutton

Marine & Environmental Sciences Faculty Articles

In a changing ocean there is a critical need to understand global biogeochemical cycling, particularly regarding carbon. We have made strides in understanding upper ocean dynamics, but the deep ocean interior (> 1000 m) is still largely unknown, despite representing the overwhelming majority of Earth's biosphere. Here we present a method for estimating deep-pelagic zooplankton biomass on an ocean-basin scale. We have made several new discoveries about the Atlantic, which likely apply to the world ocean. First, multivariate analysis showed that depth and Chl were the basic factors affecting the wet biomass of the main plankton groups. Wet biomass of …

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Sex On The Reef: Observations Of Coral Spawning In Dry Tortugas National Park, Karen L. Neely, Tracy A. Ziegler Jan 2016

Sex On The Reef: Observations Of Coral Spawning In Dry Tortugas National Park, Karen L. Neely, Tracy A. Ziegler

Marine & Environmental Sciences Faculty Articles

In Florida’s remote Dry Tortugas National Park, coral reefs are an important management priority. Reproduction of coral species is difficult to monitor, however, and the reproductive potential of coral colonies at the park has been a matter of concern for several years. Two threatened species, elkhorn coral (Acropora palmata) and pillar coral (Dendrogyra cylindrus), were targeted for observation during their predicted annual spawning event in August 2014. Over a three-night period, both species were observed releasing gametes in near synchrony with observations at other sites in the Florida Keys. That these organisms are capable of being …

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Model Suggests Potential For Porites Coral Population Recovery After Removal Of Anthropogenic Disturbance (Luhuitou, Hainan, South China Sea), Meixia Zhao, Bernhard Riegl, Kefu Yu, Qi Shi, Qiaomin Zhang, Guohui Liu, Hongqiang Yang, Hongquiang Yan Jan 2016

Model Suggests Potential For Porites Coral Population Recovery After Removal Of Anthropogenic Disturbance (Luhuitou, Hainan, South China Sea), Meixia Zhao, Bernhard Riegl, Kefu Yu, Qi Shi, Qiaomin Zhang, Guohui Liu, Hongqiang Yang, Hongquiang Yan

Marine & Environmental Sciences Faculty Articles

Population models are important for resource management and can inform about potential trajectories useful for planning purposes, even with incomplete monitoring data. From size frequency data on Luhuitou fringing reef, Hainan, South China Sea, a matrix population model of massive corals (Porites lutea) was developed and trajectories over 100 years under no disturbance and random disturbances were projected. The model reflects a largely open population of Porites lutea, with low local recruitment and preponderance of imported recruitment. Under no further disturbance, the population of Porites lutea will grow and its size structure will change from predominance of …

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Recent Increases In Arctic Freshwater Flux Affects Labrador Sea Convection And Atlantic Overturning Circulation, Qian Yang, Tim Dixon, Paul G. Myers, Jennifer Bonin, Don Chambers, M.R. Van Den Broeke, Mads H. Ribergaard, John Mortensen Jan 2016

Recent Increases In Arctic Freshwater Flux Affects Labrador Sea Convection And Atlantic Overturning Circulation, Qian Yang, Tim Dixon, Paul G. Myers, Jennifer Bonin, Don Chambers, M.R. Van Den Broeke, Mads H. Ribergaard, John Mortensen

School of Geosciences Faculty and Staff Publications

The Atlantic Meridional Overturning Circulation (AMOC) is an important component of ocean thermohaline circulation. Melting of Greenland’s ice sheet is freshening the North Atlantic; however, whether the augmented freshwater flux is disrupting the AMOC is unclear. Dense Labrador Sea Water (LSW), formed by winter cooling of saline North Atlantic water and subsequent convection, is a key component of the deep southward return flow of the AMOC. Although LSW formation recently decreased, it also reached historically high values in the mid-1990s, making the connection to the freshwater flux unclear. Here we derive a new estimate of the recent freshwater flux from …

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Dragon Kings Of The Deep Sea: Marine Particles Deviate Markedly From The Common Number-Size Spectrum, Alexander B. Bochdansky, Melissa A. Clouse, Gerhard J. Herndl Jan 2016

Dragon Kings Of The Deep Sea: Marine Particles Deviate Markedly From The Common Number-Size Spectrum, Alexander B. Bochdansky, Melissa A. Clouse, Gerhard J. Herndl

OES Faculty Publications

Particles are the major vector for the transfer of carbon from the upper ocean to the deep sea. However, little is known about their abundance, composition and role at depths greater than 2000 m. We present the first number-size spectrum of bathy-and abyssopelagic particles to a depth of 5500 m based on surveys performed with a custom-made holographic microscope. The particle spectrum was unusual in that particles of several millimetres in length were almost 100 times more abundant than expected from the number spectrum of smaller particles, thereby meeting the definition of "dragon kings." Marine snow particles overwhelmingly contributed to …

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A Highly Sensitive Underwater Video System For Use In Turbid Aquaculture Ponds, Chin-Chang Hung, Shih-Chieh Tsao, Kuo-Hao Huang, Hsu-Kunag Chang, Fred C. Dobbs Jan 2016

A Highly Sensitive Underwater Video System For Use In Turbid Aquaculture Ponds, Chin-Chang Hung, Shih-Chieh Tsao, Kuo-Hao Huang, Hsu-Kunag Chang, Fred C. Dobbs

OES Faculty Publications

The turbid, low-light waters characteristic of aquaculture ponds have made it difficult or impossible for previous video cameras to provide clear imagery of the ponds' benthic habitat. We developed a highly sensitive, underwater video system (UVS) for this particular application and tested it in shrimp ponds having turbidities typical of those in southern Taiwan. The system's high-quality video stream and images, together with its camera capacity (up to nine cameras), permit in situ observations of shrimp feeding behavior, shrimp size and internal anatomy, and organic matter residues on pond sediments. The UVS can operate continuously and be focused remotely, a …

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The Contribution Of Marine Aggregate-Associated Bacteria To The Accumulation Of Pathogenic Bacteria In Oysters: An Agent-Based Model, Andrew M. Kramer, J. Evan Ward, Fred C. Dobbs, Melissa L. Pierce Jan 2016

The Contribution Of Marine Aggregate-Associated Bacteria To The Accumulation Of Pathogenic Bacteria In Oysters: An Agent-Based Model, Andrew M. Kramer, J. Evan Ward, Fred C. Dobbs, Melissa L. Pierce

OES Faculty Publications

Bivalves process large volumes of water, leading to their accumulation of bacteria, including potential human pathogens (e.g., vibrios). These bacteria are captured at low efficiencies when freely suspended in the water column, but they also attach to marine aggregates, which are captured with near 100% efficiency. For this reason, and because they are often enriched with heterotrophic bacteria, marine aggregates have been hypothesized to function as important transporters of bacteria into bivalves. The relative contribution of aggregates and unattached bacteria to the accumulation of these cells, however, is unknown. We developed an agent-based model to simulate accumulation of vibrio-type bacteria …

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Developing Priority Variables (“Ecosystem Essential Ocean Variables” — Eeovs) For Observing Dynamics And Change In Southern Ocean Ecosystems, Andrew J. Constable, Daniel P. Costa, Oscar Schofield, Louise Newman, Edward R. Urban Jr., Elizabeth A. Fulton, Jessica Melbourne-Thomas, Tosca Ballerini, Philip W. Boyd, Angelika Brandt, Eileen E. Hofmann Jan 2016

Developing Priority Variables (“Ecosystem Essential Ocean Variables” — Eeovs) For Observing Dynamics And Change In Southern Ocean Ecosystems, Andrew J. Constable, Daniel P. Costa, Oscar Schofield, Louise Newman, Edward R. Urban Jr., Elizabeth A. Fulton, Jessica Melbourne-Thomas, Tosca Ballerini, Philip W. Boyd, Angelika Brandt, Eileen E. Hofmann

CCPO Publications

Reliable statements about variability and change in marine ecosystems and their underlying causes are needed to report on their status and to guide management. Here we use the Framework on Ocean Observing (FOO) to begin developing ecosystem Essential Ocean Variables (eEOVs) for the Southern Ocean Observing System (SOOS). An eEOV is a defined biological or ecological quantity, which is derived from field observations, and which contributes significantly to assessments of Southern Ocean ecosystems. Here, assessments are concerned with estimating status and trends in ecosystem properties, attribution of trends to causes, and predicting future trajectories. eEOVs should be feasible to collect …

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Development Of A Low-Cost Arduino-Based Sonde For Coastal Applications, Grant Lockridge, Brian Dzwonkowski, Reid Nelson, Sean P. Powers Jan 2016

Development Of A Low-Cost Arduino-Based Sonde For Coastal Applications, Grant Lockridge, Brian Dzwonkowski, Reid Nelson, Sean P. Powers

University Faculty and Staff Publications

This project addresses the need for an expansion in the monitoring of marine environments by providing a detailed description of a low cost, robust, user friendly sonde, built on Arduino Mega 2560 (Mega) and Arduino Uno (Uno) platforms. The sonde can be made without specialized tools or training and can be easily modified to meet individual application requirements. The platform allows for internal logging of multiple parameters of which conductivity, temperature, and GPS position are demonstrated. Two design configurations for different coastal hydrographic applications are highlighted to show the robust and versatile nature of this sensor platform. The initial sonde …

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Potential Benefits And Shortcomings Of Marine Protected Areas For Small Seabirds Revealed Using Miniature Tags, Sara M. Maxwell, Melinda G. Conners, Nicholas B. Sisson, Tiffany M. Dawson Jan 2016

Potential Benefits And Shortcomings Of Marine Protected Areas For Small Seabirds Revealed Using Miniature Tags, Sara M. Maxwell, Melinda G. Conners, Nicholas B. Sisson, Tiffany M. Dawson

Biological Sciences Faculty Publications

Marine protected areas are considered important tools for protecting marine biodiversity, and animal tracking is a key way to determine if boundaries are effectively placed for protection of key marine species, including seabirds. We tracked chick-rearing brown noddies (Anous stolidus) from the Dry Tortugas National Park in Florida USA in 2016 using 1.8 g Nanofix GPS tags (n = 10), making this the first time this species has ever been tracked. We determined movement parameters, such as flight speed, distance traveled and home range, and how birds used a complex of marine protected areas including the Dry Tortugas …

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Influence Of Increased Sediment Exposure On Suspension-Feeder Assemblages In A Temperate Seagrass Meadow, Pierre Bouvais Jan 2016

Influence Of Increased Sediment Exposure On Suspension-Feeder Assemblages In A Temperate Seagrass Meadow, Pierre Bouvais

Theses: Doctorates and Masters

The impact of increased sediment exposure on coastal marine ecosystems is one of the most important contemporary environmental issues. Sediment exposure is defined as the concentrations of sediment particles suspended in the water column and the amount of sediment depositing on the seabed. In addition to natural events, such as land erosion, rainfall, and tidal currents, anthropogenic activities such as land use, road building, logging, mining, port maintenance and dredging, contribute to the discharge of a great amount of sediment in the water column. As sessile suspension-feeder assemblages play a critical role in marine ecosystems through their active transfers of …

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River Report. State Of The Lower St. Johns River Basin, Florida: Water Quality, Fisheries, Aquatic Life, Contaminants, 2016, Environmental Protection Board, City Of Jacksonville, University Of North Florida, Jacksonville University, Gerry Pinto, Nisse Goldberg, Radha Pyati, Peter Bacopoulos, Anthony Ouellette, Gretchen Bielmyer-Fraser, An-Phong Le, Ray Oldakowski Jan 2016

River Report. State Of The Lower St. Johns River Basin, Florida: Water Quality, Fisheries, Aquatic Life, Contaminants, 2016, Environmental Protection Board, City Of Jacksonville, University Of North Florida, Jacksonville University, Gerry Pinto, Nisse Goldberg, Radha Pyati, Peter Bacopoulos, Anthony Ouellette, Gretchen Bielmyer-Fraser, An-Phong Le, Ray Oldakowski

State of the River Report

No abstract provided.

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Beyond Just Sea-Level Rise: Considering Macroclimatic Drivers Within Coastal Wetland Vulnerability Assessments To Climate Change, Michael J. Osland, Nicholas M. Enwright, Richard H. Day, Christopher A. Gabler, Camille L. Stagg, James B. Grace Jan 2016

Beyond Just Sea-Level Rise: Considering Macroclimatic Drivers Within Coastal Wetland Vulnerability Assessments To Climate Change, Michael J. Osland, Nicholas M. Enwright, Richard H. Day, Christopher A. Gabler, Camille L. Stagg, James B. Grace

School of Earth, Environmental, & Marine Sciences Faculty Publications

Due to their position at the land-sea interface, coastal wetlands are vulnerable to many aspects of climate change. However, climate change vulnerability assessments for coastal wetlands generally focus solely on sea-level rise without considering the effects of other facets of climate change. Across the globe and in all ecosystems, macroclimatic drivers (e.g., temperature and rainfall regimes) greatly influence ecosystem structure and function. Macroclimatic drivers have been the focus of climate change-related threat evaluations for terrestrial ecosystems, but largely ignored for coastal wetlands. In some coastal wetlands, changing macroclimatic conditions are expected to result in foundation plant species replacement, which would …

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Gene Flow And Genetic Structure Of The Seagrass Thalassia Hemprichii In The Indo-Australian Archipelago, Udhi Eko Hernawan Jan 2016

Gene Flow And Genetic Structure Of The Seagrass Thalassia Hemprichii In The Indo-Australian Archipelago, Udhi Eko Hernawan

Theses: Doctorates and Masters

How genetic variation is distributed across space (genetic structure) and what factors influence the spatial genetic structuring is one of the primary questions in population genetics. The interaction between species biology (e.g. life-history traits) and physical processes operating in the seascape over time, including palaeo-historical events (e.g. sea level fluctuations) and contemporary processes (e.g. ocean currents), have been predicted to influence the extent of gene flow and the spatial genetic structuring in marine organisms. However, the relative contribution of each factor in governing the genetic pattern remains unclear. This study examined the pattern of genetic structure and the factors influencing …

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Response Of Fishes To Restoration Projects In Bayou St. John Located Within The City Of New Orleans, Louisiana, Including Hydrological Characterization And Hydrodynamic Modelling, Patrick W. Smith Dec 2015

Response Of Fishes To Restoration Projects In Bayou St. John Located Within The City Of New Orleans, Louisiana, Including Hydrological Characterization And Hydrodynamic Modelling, Patrick W. Smith

LSU New Orleans Theses and Dissertations

Quantifying the impacts of restoration on coastal waterways is crucial to understanding their effectiveness. Here, I look at the impacts of multiple restoration projects on urban waterways within the city limits of New Orleans, LA, with an emphasis on the response of fishes. First I report the effects of two projects designed to improve exchange down estuary on the hydrologic characteristics of Bayou St. John (BSJ). Within BSJ, flow is dominated by subtidal wind driven processes. Removal of an outdated flood control structure did not appear to alter exchange in BSJ, but removal combined with sector gate openings did. I …

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