Marine Biology Commons^™

Eelgrass Distribution And Biomass In The Great Bay Estuary For 2015, Frederick T. Short

PREP Reports & Publications

See also: "Eelgrass/Macroalgae Discussion Primer for TAC Activities 2016-2017" http://scholars.unh.edu/prep/355

Eelgrass (Zostera marina L.) is an essential habitat for the Great Bay Estuary (GBE) because it is the basis of an estuarine food web that supports many of the recreationally, commercially and ecologically important species in the estuary and beyond. Eelgrass provides food for ducks, geese and swans, as well as food, nursery habitat, and shelter for juvenile fish and shellfish. Eelgrass filters estuarine waters and improves water clarity, removing both nutrients and suspended sediments from the water column; its roots and rhizomes bind and hold sediments in place, thereby …

Improving Spatial Prioritisation For Remote Marine Regions: Optimising Biodiversity Conservation And Sustainable Development Trade-Offs, Cordelai H. Moore, Ben T. Radford, Hugh P. Possingham, Andrew Heyward, Romola R. Stewart, Matthew E. Watts, Jim Prescott, Stephen J. Newman, Euan S. Harvey, Rebecca Fisher, Clay W. Bryce, Ryan J. Lowe, Oliver Berry, Alexis Espinosa- Gayosso, Errol Sporer, Thor Saunders

Fisheries Research Articles

Creating large conservation zones in remote areas, with less intense stakeholder overlap and limited environmental information, requires periodic review to ensure zonation mitigates primary threats and fill gaps in representation, while achieving conservation targets. Follow-up reviews can utilise improved methods and data, potentially identifying new planning options yielding a desirable balance between stakeholder interests. This research explored a marine zoning system in north-west Australia–a biodiverse area with poorly documented biota. Although remote, it is economically significant (i.e. petroleum extraction and fishing). Stakeholder engagement was used to source the best available biodiversity and socio-economic data and advanced spatial analyses produced 765 …

Eelgrass Distribution In The Great Bay Estuary For 2014, Frederick T. Short

PREP Reports & Publications

See also: "Eelgrass/Macroalgae Discussion Primer for TAC Activities 2016-2017" http://scholars.unh.edu/prep/355

Eelgrass (Zostera marina L.) is an essential habitat for the Great Bay Estuary (GBE) because it is the basis of an estuarine food web that supports many of the recreationally, commercially and ecologically important species in the estuary and beyond. Eelgrass provides food for ducks, geese and swans, as well as food, nursery habitat, and shelter for juvenile fish and shellfish. Eelgrass filters estuarine waters and improves water clarity, removing both nutrients and suspended sediments from the water column; its roots and rhizomes bind and hold sediments in place, thereby …

Guideline For Stakeholder Engagement On Aquatic Resource Management-Related Processes, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

Community Structure And Production Of The Macrobenthos On Four Artificial Reefs In The Mississippi Sound In Relation To Substrate And Profile Type, Patrick Daniel Gillam

Master's Theses

In recent years, the Mississippi Department of Marine Resources (DMR) has made a concerted effort to enhance its coastal fishery resources by creating artificial reefs. Through this effort, 73 nearshore reefs have been created across the MS coast. Different substrate types used to construct MS artificial reefs include oyster shell and cement rubble. Two types of reef architecture used include high profile breakwater and low profile submerged structures. This study compared the benthic biota associated with oyster shell and cement rubble substrates among four artificial reefs representing high and low profile structures in summer 2011. Colonized benthic biota were quantified …

Effects Of Shoreline Dynamics On Saltmarsh Vegetation, Shailesh Sharma, Joshua Goff, Ryan M. Moody, Ashley Mcdonald, Dorothy Byron, Kenneth L. Heck Jr., Sean Powers, Carl Ferraro, Just Cebrian

University Faculty and Staff Publications

We evaluated the impact of shoreline dynamics on fringing vegetation density at mid- and low-marsh elevations at a high-energy site in the northern Gulf of Mexico. Particularly, we selected eight unprotected shoreline stretches (75 m each) at a historically eroding site and measured their inter-annual lateral movement rate using the DSAS method for three consecutive years. We observed high inter-annual variability of shoreline movement within the selected stretches. Specifically, shorelines retrograded (eroded) in year 1 and year 3, whereas, in year 2, shorelines advanced seaward. Despite shoreline advancement in year 2, an overall net erosion was recorded during the survey …

Host-Parasite Relationships Between The Copepod Naobranchia Lizae And Its Host (Striped Mullet, Mugil Cephalus): A Description Of Morphological Development, Sara R. Teemer

DePaul Discoveries

The parasitic copepod, Naobranchia lizae, is often found within the gill arches of the striped mullet, Mugil cephalus, in the Charleston Harbor Estuarine System of South Carolina. The parasite is relatively common, but little is known about its early stages of development. In order to describe the developmental stages and pattern of morphological development, 221 female N. lizae that were collected between February 2002 and May 2003 were used. Using variation in morphological characters (maxilla, trunk), these parasites were assigned to developmental stages (juvenile, subadult, adult). A small number of the males (three ‘dwarf’ males) were also found …

Biofouling Management In The Pacific Northwest And Predation On Native Versus Non-Native Ascidians, Erin Suzanne Kincaid

Dissertations and Theses

Marine non-native species threaten economic and environmental health, making it crucial to understand factors that make them successful. Research on these species, therefore, allows for greater preparedness and informed management of biological invasions and increases understanding of elements structuring biological communities. Among the marine non-native species, and particularly the fouling community, non-native ascidians are a taxon of particular concern because they can crowd out native benthic species and smother mariculture products. This thesis addresses management for ascidians and other fouling organisms and includes research on the invasiveness of this taxon in addition to the invasibility of recipient fouling communities. On …

Automated Detection Of Deep-Sea Animals, Dallas J. Hollis, Duane Edgington, Danelle Cline

STAR Program Research Presentations

The Monterey Bay Aquarium Research Institute routinely deploys remotely operated underwater vehicles equipped with high definition cameras for use in scientific studies. Utilizing a video collection of over 22,000 hours and the Video Annotation and Reference System, we have set out to automate the detection and classification of deep-sea animals. This paper serves to explore the pitfalls of automation and suggest possible solutions to automated detection in diverse ecosystems with varying field conditions. Detection was tested using a saliency-based neuromorphic selective attention algorithm. The animals that were not detected were then used to tune saliency parameters. Once objects are detected, …

Population Dynamics And Community Composition Of Ammonia Oxidizers In Salt Marshes After The Deepwater Horizon Oil Spill, Anne E. Bernhard, Roberta Sheffer, Anne E. Giblin, John M. Marton, Brian J. Roberts

Biology Faculty Publications

The recent oil spill in the Gulf of Mexico had significant effects on microbial communities in the Gulf, but impacts on nitrifying communities in adjacent salt marshes have not been investigated. We studied persistent effects of oil on ammonia-oxidizing archaeal (AOA) and bacterial (AOB) communities and their relationship to nitrification rates and soil properties in Louisiana marshes impacted by the Deepwater Horizon oil spill. Soils were collected at oiled and unoiled sites from Louisiana coastal marshes in July 2012, 2 years after the spill, and analyzed for community differences based on ammonia monooxygenase genes (amoA). Terminal Restriction Fragment …

Ménage À Trois In The Atlantic Brief Squid (Lolliguncula Brevis): Prior Presence Affects Mate Choice, Rachel A. Schlessinger

Theses and Dissertations

Lolliguncula brevis given prior presence experienced a significantly greater number of contacts with opposite sex squid than rivals. Males given prior presence also spent significantly more time in proximity to females than rivals. This suggests that for both female and male Atlantic brief squid, having prior presence influences mating behavior.

Nitrogen, Phosphorus, And Suspended Solids Concentrations In Tributaries To The Great Bay Estuary Watershed In 2015, Matthew A. Wood

PREP Reports & Publications

Nitrogen, phosphorus, and sediment loads to the Great Bay Estuary are a constant concern. The Piscataqua Region Estuaries Partnership (PREP) calculates the nitrogen load from tributaries to the Great Bay Estuary for its State of Our Estuaries reports. Therefore, the purpose of this study was to collect representative data on nitrogen, phosphorus, and suspended sediment concentrations in tributaries to the Great Bay Estuary in 2015. The study design followed the tributary sampling design which was implemented by the New Hampshire Department of Environmental Services between 2001 and 2007 and sustained by the University of New Hampshire from 2008 to the …

An Alternate Trawling Method: Reduced Bycatch And Benthic Disturbance Achieved With The Wing Trawling System, Geoffrey Udoff

LSU New Orleans Theses and Dissertations

The Wing Trawling System (WTS) was tested as an alternative to traditional shrimp capture methods in the Gulf. Compared to an otter trawl, this trawl was conceived to reduce bycatch, retain shrimp catch, and minimize seafloor disturbance. Through seventy-one paired tows, the WTS was assessed against a standard otter trawl. The WTS was found to reduce bycatch by 63-65% and reduce shrimp catch by 30-35%. Additionally, I measured the depth of the scars produced by both trawls and quantified the turbidity of the plumes behind them. The scars left by the WTS and the otter trawl were between 9.9 …

Ocean Acidification And Predator-Prey Relations: Correlating Disruption Of Predator Avoidance With Chemosensory Deficits, Alexandra Fw Sidun, William G. Wright

Student Scholar Symposium Abstracts and Posters

One of the most destructive effects of global climate change is the increased carbon sequestering and consequential acidification of our world’s oceans. The impacts of ocean acidification on marine organisms are still relatively unknown, especially effects on behavioral ecology. Avoiding predation has emerged from recent behavioral ecology literature as a critical feature in the life history of a wide array of animal species; experiments on marine fishes suggest acidic water compromises their predator-avoidance abilities. Recent assays in our lab suggest predator-induced behavior is reduced by weakly acidic water. These experiments do not address the potential factor of generalized malaise caused …

Connecting The Physiological And Behavioral Response To Heat Stress On A Warming Planet, Anastasia Kalyta

Student Scholar Symposium Abstracts and Posters

Intertidal communities are considered good models of the biological effects of climate change on ecosystems, as their resident organisms are subjected to heat spells during daytime low tides. The increasing heat exposure can elicit behavioral as well as physiological responses in intertidal organisms. We studied the relationship between these responses to heat stress in the blue-banded hermit crab, Pagurus samuelis, by inducing a “heat shock” with elevated water temperature of 29 °C for 2.5 h. The behavioral effect of heat-shock was quantified using a 30-minute feeding assay, measuring the mass of a standard squid pellet consumed by individual hermit crabs. …

Brain Morphology Of Madtom Catfishes (Noturus) Reflects Their Ecology, Autumn Goble, David J. Eisenhour

Celebration of Student Scholarship Poster Sessions Archive

No abstract provided.

Assessment Of Recent Eastern Oyster (Crassostrea Virginica) Reef Restoration Projects In The Great Bay Estuary, New Hampshire: Planning For The Future, Raymond E. Grizzle, Krystin M. Ward

PREP Reports & Publications

Current oyster populations in New Hampshire total less than 10% of what they were in the 1980s, and the causal factors for the declines include disease, sedimentation, and human harvest. The two major results from a population ecology perspective have been dramatic losses of oyster shell (the major substrate on which oyster larvae typically settle) as well as juvenile annual recruitment to the remaining reefs. Experimental scale oyster restoration projects addressing these two limitations (substrate and natural recruitment) were initiated in the state in the early 2000s by scientists at the University of New Hampshire (UNH). Since the mid-2000s, the …

Sea Turtle Conservation: Reviewing The Efficacy Of Land- And Sea-Based Management Strategies For Loggerhead (Caretta Caretta) And Leatherback (Dermochelys Coriacea) Sea Turtles, Glenn D. Goodwin

HCNSO Student Capstones

As cosmopolitan species, loggerhead and leatherback turtles are confronted with a multitude of threats as they progress through their respective life stages. These range from depredation and poaching of eggs, hatchlings, and females on nesting beaches, to incidental hooking in pelagic longline fisheries and capture in trawl fisheries. Some threats are species specific on regional scales, though most impact both species. To confront these threats, various conservation strategies have been developed and implemented, including monitoring and caging of nests and changes to hook shape and trawl design. Here, current conservation methods are presented and discussed on a global scale for …

Reef Fish Spatial Distribution And Benthic Habitat Associations On The Southeast Florida Reef Tract, Dana Fisco

HCNSO Student Theses and Dissertations

The Florida Reef Tract (FRT) extends from the tropical Caribbean up the southeast coast of Florida into a temperate environment where tropical reef assemblages diminish with increasing latitude. This study used data from a three-year comprehensive fishery-independent survey to quantify reef fish spatial distribution along the Southeast FRT and define where the assemblage shifts from tropical to temperate. A total of 1,676 reef fish visual census samples were conducted to assess the populations on a stratified-random selection of sites of marine hardbottom habitats between the Miami River and St. Lucie inlet. Multivariate analyses were used to investigate differences in assemblages …

Experimental Demonstration Of An Allee Effect In Microbial Populations, Rajreni B. Kaul, Andrew M. Kramer, Fred C. Dobbs, John M. Drake

OES Faculty Publications

Microbial populations can be dispersal limited. However, microorganisms that successfully disperse into physiologically ideal environments are not guaranteed to establish. This observation contradicts the Baas-Becking tenet: ‘Everything is everywhere, but the environment selects’. Allee effects, which manifest in the relationship between initial population density and probability of establishment, could explain this observation. Here, we experimentally demonstrate that small populations of Vibrio fischeri are subject to an intrinsic demographic Allee effect. Populations subjected to predationby the bacterivore Cafeteria roenbergensis display both intrinsic and extrinsic demographic Allee effects. The estimated critical threshold required to escape positive densitydependence is around 5, 20 or …

Seagrass Community Change At Three High Risk Ports In The Great Barrier Reef World Heritage Area From 2005 To 2014, Celeste Venolia

Independent Study Project (ISP) Collection

Seagrass meadows are extremely valuable and dynamic ecosystems currently facing pressure from anthropogenic disturbances. Seagrass ecosystems are declining globally because of direct and indirect threats that shift environmental conditions controlling seagrass distribution. Seagrass species responses to disturbances vary based on a number of factors including life history strategy. The goal of this study was to map and analyze patterns of dominant seagrass species change at Cairns and Gladstone from 2005-2014 and Townsville from 2007-2014. This compilation data set was symbolized according to the life history strategy of the species. The major disturbances during this time period were physical damage from …

Symbiont Type And Photophysiology Of Acropora Loripes And Platygyra Daedalea Under Future Scenarios Of Rising Ocean Temperatures And Pco2, Lauren Howe-Kerr

Independent Study Project (ISP) Collection

Coral cover is declining at an alarming rate, and it is estimated that 60% of reefs worldwide may be lost by 2030. Elevated seawater temperatures and ocean acidification are contributing to an increase in the frequency and severity of bleaching events. These events disrupt the symbiosis between corals and their photosynthetic dinoflagellates (Symbiodinium spp). Relatively little is known about the ability of corals to acclimatize to changing environmental conditions or whether the rate of climate change is too fast for corals to keep up, limiting the accuracy of future predictions for reef resilience. However, the ability of some coral species …

Marine Disease Impacts, Diagnosis, Forecasting, Management And Policy, Kevin D. Lafferty, Eileen E. Hofmann

CCPO Publications

(First paragraph) As Australians were spending millions of dollars in 2014 to remove the coraleating crown of thorns sea star from the Great Barrier Reef, sea stars started washing up dead for free along North America’s Pacific Coast. Because North American sea stars are important and iconic predators in marine communities, locals and marine scientists alike were alarmed by what proved to be the world’s most widespread marine mass mortality in geographical extent and species affected, especially given its mysterious cause. Investigative research using modern diagnostic techniques implicated a never-before-seen virus [1]. The virus inspired international attention to marine diseases, …

The Sea Among Us: The Amazing Strait Of Georgia By Richard Beamish And Gordon Mcfarlane, Dee Horne Dr.

The Goose

Review of The Sea Among Us: The Amazing Strait of Georgia by Richard Beamish and Gordon McFarlane.

Gascoyne Demersal Scalefish Managed Fishery, Department Of Fisheries

Fisheries Occasional Publications

An operators’ guide to the management arrangements 1 September 2015 – 31 August 2016.

Biodiversity And You., Garth Woodruff

Faculty Publications

No abstract provided.

Marine Ecoregion And Deepwater Horizon Oil Spill Affect Recruitment And Population Structure Of A Salt Marsh Snail, Steven C. Pennings, Scott Zengel, Jacob Oehrig, Merryl Alber, T. Dale Bishop, Donald R. Deis, Donna Devlin, A. Randall Hughes, John J. Hutchens, Jr., Whitney M. Kiehn, Caroline R. Mcfarlin, Clay L. Montague, Sean P. Powers, C. Edward Proffitt, Nicholle Rutherford, Camille L. Stagg, Keith Walters

University Faculty and Staff Publications

Marine species with planktonic larvae often have high spatial and temporal variation in recruitment that leads to subsequent variation in the ecology of benthic adults. Using a combination of published and unpublished data, we compared the population structure of the salt marsh snail, Littoraria irrorata, between the South Atlantic Bight and the Gulf Coast of the United States to infer geographic differences in recruitment and to test the hypothesis that the Deepwater Horizon oil spill led to widespread recruitment failure of L. irrorata in Louisiana in 2010. Size-frequency distributions in both ecoregions were bimodal, with troughs in the distributions consistent …

Long-Term, High Frequency In Situ Measurements Of Intertidal Mussel Bed Temperatures Using Biomimetic Sensors, Brian Helmuth, Francis Choi, Allison Matzelle, Jessica Torossian, Scott Morello, K.A.S. Mislan, Lauren Yamane, Denise Strickland, P. Szathmary, Sarah Gilman, Alyson Tockstein, Thomas Hilbish, Michael Burrows, Anne Marie Power, Elizabeth Gosling, Nova Mieszkowska, Christopher Harley, Michael Nishizaki, Emily Carrington, Bruce Menge, Laura Petes, Melissa Foley, Angela Johnson, Megan Poole, Mae Noble, Erin Richmond, Matt Robart, Jonathan Robinson, Jerod Sapp, Jackie Sones, Bernardo Broitman, Mark Denny, Katharine Mach, Luke P. Miller, Michael O'Donnell, Philip Ross, Gretchen Hofmann, Mackenzie Zippay, Carol Blanchette, J. Macfarlan, Eugenio Carpizo-Ituarte, Benjamin Ruttenberg, Carlos Peña Mejía, Christopher Mcquaid, Justin Lathlean, Cristián Monaco, Katy Nicastro, Gerardo Zardi

Faculty Publications, Biological Sciences

At a proximal level, the physiological impacts of global climate change on ectothermic organisms are manifest as changes in body temperatures. Especially for plants and animals exposed to direct solar radiation, body temperatures can be substantially different from air temperatures. We deployed biomimetic sensors that approximate the thermal characteristics of intertidal mussels at 71 sites worldwide, from 1998-present. Loggers recorded temperatures at 10–30 min intervals nearly continuously at multiple intertidal elevations. Comparisons against direct measurements of mussel tissue temperature indicated errors of ~2.0–2.5 °C, during daily fluctuations that often exceeded 15°–20 °C. Geographic patterns in thermal stress based on biomimetic …

Exposing Artemia Salina To Chattonella Subsalsa: A General Toxicity Test, Nicholas Picha

Bridges: A Journal of Student Research

The raphidophyte Chattonella subsalsa has been reported to cause harmful algal blooms in every major ocean. In South Carolina, C. subsalsa blooms have been observed in brackish stormwater detention ponds as well as estuarine waters neighboring urbanized areas. Blooms frequently cause fish kills although the fish kill mechanism of C. subsalsa is currently unknown. In many harmful species, the lethality of algal cells is thought to correspond with algal growth phase. Algal growth is known to progress through five distinct phases; lag, early exponential, late exponential, stationary, and decline. In nature, harmful algal blooms commonly occur in the late exponential …

Isolation And Characterization Of Microbial Community Associated With Diadumene Lineata, The Orange-Striped Sea Anemone, Tiffany Lin, Andrew Weir

Student and Faculty Research Days

The orange-striped sea anemone, Diadumene lineata, is a marine invertebrate that can be found in the Northern Hemisphere. Distribution of Diadumene lineata ranges from Japan to the Gulf of Argentina. This invasive anemone originated from the Pacific Coast of Asia and serves as a host for a diverse microbial community including a photosynthetic alga. The epiphytic bacteria adhere to the outer surface as well as to the gastrovascular cavity of the host. The microbial community associated with Diadumene lineata is relatively unknown. This study attempted to isolate and identify bacteria commonly associated with this invasive marine invertebrate. Diadumene lineata was …