Marine Biology Commons^™

Winter Skate (Leucoraja Ocellata) Jaw, Emily M. Salonia, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw 11.7 cm total length (TL) from Winter Skate (Leucoraja ocellata) collected from NSU Fisheries and Avian Ecology Laboratory on 3/23/21 by Emily Salonia.

Blacktip Shark (Carcharhinus Limbatus) Jaw, Katerina D. Sawickij, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from 176.1 cm total length (TL) Carcharhinus limbatus (Blacktip), collected from Hollywood Beach, FL on 3/13/21 by Katerina Sawickij.

Longnose Skate Jaw (Beringraja Rhina), Golda Stewart, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from female Longnose Skate (Beringraja rhina) collected on 30/3/2021 by Golda Stewart.

Bycatch Reduction Devices As A Method To Reduce Mortality Rates Of Malaclemys Terrapin In Crab Pots, Benjamin Lowstuter, Leslie Delong, Corey Hymel

Showcase of Osprey Advancements in Research and Scholarship (SOARS)

Diamondback terrapins (Malaclemys terrapin) currently face population loss along their broad coastal North American range, spanning from Massachusetts down to Texas. This species is suggested to be an important indicator of environmental change within the limited brackish water habitat along the coastlines. Terrapin mortality predominantly stems from human activities, such as commercial and recreational blue crab (Callinectes sapidus) trapping. Once caught in one of many crab pots littered throughout their aquatic habitat, terrapins can easily drown in several hours upon capture. In reviewing published research, the use of bycatch reduction devices (BRDs) have been shown to reduce the number of …

Why Are You So Slimy?, Lindsay Dillman, James Gelsleichter, Laura Habegger

Showcase of Osprey Advancements in Research and Scholarship (SOARS)

The epithelium of vertebrates is a complex tissue that houses a large variety of cells with different functions. One of its most important functions is protection and in many cases this function is achieved by exuding copious amounts of mucous that fight off diseases, harmful toxins and overall protect the species from external invaders. Mucous, made of mucin, is produced by specialized epithelial cells called goblet cells. Among vertebrates’, fishes are perhaps one of the major groups known to produce mucous, particularly stingrays. The Atlantic stingray, Dasyatis sabina is one of the few cartilaginous fishes known to inhabit both freshwater …

Spiny Dogfish (Squalus Acanthias) Jaw Prep, Meredith M. Pratt, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Spiny dogfish jaw prep performed at NSU's Fisheries and Avian Ecology lab.

Protocols For Assessing Transformation Rates Of Nitrous Oxide In The Water Column, Annie Bourbonnais, Claudia Frey, Xin Sun, Laura A. Bristow, Amal Jayakumar, Nathaniel E. Ostrom, Karen L. Casciotti, Bess B. Ward

Faculty Publications

Nitrous oxide (N2O) is a potent greenhouse gas and an ozone destroying substance. Yet, clear step-by-step protocols to measure N2O transformation rates in freshwater and marine environments are still lacking, challenging inter-comparability efforts. Here we present detailed protocols currently used by leading experts in the field to measure water-column N2O production and consumption rates in both marine and other aquatic environments. We present example 15N-tracer incubation experiments in marine environments as well as templates to calculate both N2O production and consumption rates. We discuss important considerations and recommendations regarding (1) precautions to prevent oxygen (O2) contamination during low-oxygen and anoxic …

Are Populations Of Economically Important Bonefish And Queen Conch 'Open' Or 'Closed' In The Northern Caribbean Basin?, Marlis R. Douglas, Tyler Chafin, Julie E. Claussen, David P. Philipp, Michael E. Douglas

Biological Sciences Faculty Publications and Presentations

Demographics of co-occurring species can often be diagnosed through population genomic analyses of single nucleotide polymorphisms (SNPs). These data can define population structure, gene flow, and candidate regions in the genome that potentially reflect local adaptations. They can also gauge whether populations are demographically “open” or “closed” (i.e., with global or local recruitment). We derived SNPs from double-digest restriction-site associated DNA (ddRAD) to test the demographics of commercially important bonefish Albula vulpes (N = 117) and queen conch Lobatus gigas (N = 60) from two northeast Caribbean Basin islands (Grand Bahama to the north and Eleuthera to the …

Success Of Glover’S Reef Marine Reserve On Queen Conch (Strombus Gigas) Populations In Belize, Gianna Fanelli, Ciera Jarrett, Sara Joralemon

The Pegasus Review: UCF Undergraduate Research Journal

The queen conch (Strombus gigas) provides important economic, ecological, and societal benefits to local communities throughout the Caribbean. The species, however, has fallen victim to commercial exploitation and overfishing in many areas. In Belize, even with restricted harvesting seasons, size restrictions, and regulations set by the Convention on International Trade in Endangered Species (CITES), harvesting practices have significantly depleted populations. Marine reserves, including the Glover’s Reef Marine Reserve, were established to protect biodiversity and maintain populations of Belize’s natural coral reefs. Utilizing size, frequency, and evidence of harvesting (shell notches), the 2018 Tropical Marine Biology (BSC 3355) course …

Caracuel_ Spiny Dogfish (Squalus Acanthias) Jaw, Nicolas M. Caracuel, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Female Spiny Dogfish (Squalus acanthias) jaw collected in MBIO 3910 Lab on 11/03/2021 by Nicolas M. Caracuel.

2 cm tall at the center/middle of the jaw.

3.1cm tall at the hinges.

7.9 cm long from hinge to hinge.

An Ecotoxicological Approach To Microplastics On Terrestrial And Aquatic Organisms: A Systematic Review In Assessment, Monitoring And Biological Impact, Omar A. Vazquez, Saydur Rahman

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Marine and land plastic debris biodegrades at micro- and nanoscales through progressive fragmentation. Oceanographic model studies confirm the presence of up to ~2.41 million tons of microplastics across the Atlantic, Pacific, and Indian subtropical gyres. Microplastics distribute from primary (e.g., exfoliating cleansers) and secondary (e.g., chemical deterioration) sources in the environment. This anthropogenic phenomenon poses a threat to the flora and fauna of terrestrial and aquatic ecosystems as ingestion and entanglement cases increase over time. This review focuses on the impact of microplastics across taxa at suggested environmentally relevant concentrations, and advances the groundwork for future ecotoxicological-based research on microplastics …

Comparative Effects Of Chemical And Physical Sunscreen On Fertilization Of Purple Sea Urchins (Strongylocentrotus Purpuratus), Marilla Lippert, Maurice Codespoti Goodman, Nikki Adams

Biological Sciences

Organic compound-based “chemical” sunscreens dominate the commercial sunscreen market, but recent research has revealed the ingredients of these products are detrimental to the health of marine organisms. This revelation has led to increased popularity of mineral-based “physical” sunscreens, primarily containing zinc-oxide (ZnO), as environmentally safe alternatives. While they are marketed as environmentally safe, these claims are largely untested, and it is important to consider potential effects of ZnO-based sunscreens on the development of marine organisms. Though Zn is a necessary micronutrient in the ocean, excess Zn is released into marine environments from anthropogenic sources has negative effects on marine life. …

Thermal Acclimation Of Tropical Coral Reef Fishes To Global Heat Waves, Jacob L. Johansen, Lauren E. Nadler, Adam Habary, Alyssa J. Bowden, Jodie Rummer

Marine & Environmental Sciences Faculty Articles

As climate-driven heat waves become more frequent and intense, there is increasing urgency to understand how thermally sensitive species are responding. Acute heating events lasting days to months may elicit acclimation responses to improve performance and survival. However, the coordination of acclimation responses remains largely unknown for most stenothermal species. We documented the chronology of 18 metabolic and cardiorespiratory changes that occur in the gills, blood, spleen, and muscles when tropical coral reef fishes are thermally stressed (+3.0°C above ambient). Using representative coral reef fishes (Caesio cuning and Cheilodipterus quinquelineatus) separated by >100 million years of evolution and …

Documentation Of Atlantic Tarpon (Megalops Atlanticus) Space Use And Move Persistence In The Northern Gulf Of Mexico Facilitated By Angler Advocates, J. Marcus Drymon, Matthew B. Jargowsky, Michael A. Dance, Mitchell Lovell, Crystal L. Hightower, Amanda E. Jefferson, Andrea M. Kroetz, Sean P. Powers

University Faculty and Staff Publications

Atlantic tarpon (Megalops atlanticus, hereafter tarpon) are facing a multitude of stressors and are considered Vulnerable by the IUCN; however, significant gaps remain in our understanding of tarpon space use and movement. From 2018 to 2019, citizen scientists facilitated tagging of 23 tarpon with SPOT tags to examine space use and movement across the northern Gulf of Mexico. Movement-based kernel densities were used to estimate simplified biased random bridge-based utilization distributions and a joint move persistence model was used to estimate a behavioral index for each fish. Tarpon showed consistent east–west movement from the Alabama/Florida border to Louisiana, and utilization …

Scalability And Performance Tradeoffs In Quantifying Relationships Between Elevation And Tidal Wetland Plant Communities, James R. Holmquist, Lisa Schile-Beers, Kevin Buffington, Meng Lu, Thomas J. Mozdzer, Jefferson Riera, Donald E. Weller, Meghan Williams, J Patrick Megonigal

Biology Faculty Research and Scholarship

Elevation is a major driver of plant ecology and sediment dynamics in tidal wetlands, so accurate and precise spatial data are essential for assessing wetland vulnerability to sea-level rise and making forecasts. We performed survey-grade elevation and vegetation surveys of the Global Change Research Wetland, a brackish microtidal wetland in the Chesapeake Bay estuary, Maryland (USA), to both intercompare unbiased digital elevation model (DEM) creation techniques and to describe niche partitioning of several common tidal wetland plant species. We identified a tradeoff between scalability and performance in creating unbiased DEMs, with more data-intensive methods such as kriging performing better than …

Effects Of Invasional Meltdown On Community Structure In Marine Ecosystems In The Damariscotta Estuary Of Maine, Kate Lazzeri

Student Research Poster Presentations 2021

Basibiont organisms form the foundation of marine ecosystems by providing additional space for new species to settle on as epibionts. Invasive epibionts may take advantage of this new basibiont presence, which leads to many harmful effects on native organisms such as competition for both resources and food. In some cases, invasive species facilitate recruitment of other invasive organisms, a phenomenon referred to as invasional meltdown, but it is not known if invasion of new basibionts increases invasive epibiont occurrence. The purpose of this study is to answer the following research questions: 1) does the invasion status of the basibiont alter …

Assessing The Utility Of Environmental Dna Techniques To Monitor White Shrimp (Litopenaeus Setiferus) Abundance On The Georgia Coast, Raven Hurt

College of Graduate Studies: Theses & Dissertations

Environmental DNA (eDNA) surveys have developed over the last decade from once being a novel tool to now acting as an effective technology often used in complement to traditional capture surveys for assessing the distribution of organisms in freshwater and marine environments. However, many uncertainties on how to properly develop, operate, and analyze eDNA based techniques still hinder this technology effectiveness in the field. The white shrimp, Litopenaeus setiferus, is a common, commercially and recreationally important species in the United States, with landings exceeding $254 million in 2020. L. setiferus is also used as a key indicator species to changes …

Novel Quantification And Localization Of Water And Solute Transporters In The Tissues Of The Spiney Dogfish (Squalus Acanthias), Tolulope B. Ojo

College of Graduate Studies: Theses & Dissertations

The dogfish, Squalus acanthias is a marine cartilaginous elasmobranch found in the North Atlantic and Pacific oceans. Dogfish synthesize and excrete urea as a product of nitrogen metabolism. They also convert ammonia into urea and retain this urea, such that their plasma is isosmotic or slightly hyperosmotic to the surrounding seawater. To facilitate the regulation of body fluid and to maintain ionic concentrations and osmotic pressure, Dogfish use ion and solute transporters (e.g., NCC, UT-1) and aquaporin water channel proteins. Studies have identified some of the aquaporin genes in the elasmobranch genome, but their functions are mostly uncharacterized. Recent transcriptomic …

Black Grouper (Mycteroperca Bonaci) Neurocranium, Celeste Jaworski, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from 7.5 cm total length. Black Grouper (Mycteroperca bonaci), collected from Denny's Seafood Market on 15/10/2021 by Celeste Jaworski.

Gafftopsail Catfish Neurocranium, Allison J. Soucier

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Gafftopsail Catfish (Bagre marinus), neurocranium length: 11.5 cm, collected from Keewaydin Island in Marco Florida on 15/9/2021 by Allison Soucier.

Demography, Morphometrics, And Stomach Contents Of Common Ravens Examined As A Result Of Controlled Take, Corinne M. Gibble, Kriss K. Neuman, Jessie Beck

Human–Wildlife Interactions

Common ravens (Corvus corax; ravens) are known nest predators that have the ability to negatively impact nesting birds, including imperiled species of seabirds and shorebirds. We conducted systematic necropsies of ravens that were lethally controlled in Monterey Bay, California, USA during 2013–2015, in or near western snowy plover (Charadrius nivosus nivosus) nesting areas, in an effort to better understand body condition, overall health, and diet of individual ravens. Raven predation of snowy plover nests has increased over the years in the Monterey Bay study area, and lethal removal of ravens has been employed to reduce predation. …

Consensus Guidelines For Advancing Coral Holobiont Genome And Specimen Voucher Deposition, Christian R. Voolstra, Kate M. Quigley, Sarah W. Davies, John Everett Parkinson, Raquel S. Peixoto, Manuel Aranda, Andrew C. Baker, Adam R. Barno, Daniel J. Barshis, Francesca Benzoni, Victor Bonito, David G. Bourne, Carol Buitrago-López, Tom C.L. Bridge, Cheong Xin Chan, David J. Combosch, Jamie Craggs, Jörg C. Frommlet, Santiago Herrera, Andrea M. Quattrini, Till Röthig, James D. Reimer, Esther Rubio-Portillo, David J. Suggett, Helena Villela, Maren Ziegler, Michael Sweet

Biological Sciences Faculty Publications

Coral research is being ushered into the genomic era. To fully capitalize on the potential discoveries from this genomic revolution, the rapidly increasing number of high-quality genomes requires effective pairing with rigorous taxonomic characterizations of specimens and the contextualization of their ecological relevance. However, to date there is no formal framework that genomicists, taxonomists, and coral scientists can collectively use to systematically acquire and link these data. Spurred by the recently announced “Coral symbiosis sensitivity to environmental change hub” under the “Aquatic Symbiosis Genomics Project” - a collaboration between the Wellcome Sanger Institute and the Gordon and Betty Moore Foundation …

Remarkably High And Consistent Tolerance Of A Red Sea Coral To Acute And Chronic Thermal Stress Exposures, Nicolas R. Evensen, Maoz Fine, Gabriela Perna, Christian R. Voolstra, Daniel J. Barshis

Biological Sciences Faculty Publications

Global warming is resulting in unprecedented levels of coral mortality due to mass bleaching events and, more recently, marine heatwaves, where rapid increases in seawater temperature cause mortality within days. Here, we compare the response of a ubiquitous scleractinian coral, Stylophora pistillata, from the northern Red Sea to acute (7 h) and chronic (7-11 d) thermal stress events that include temperature treatments of 27 degrees C (i.e., the local maximum monthly mean), 29.5 degrees C, 32 degrees C, and 34.5 degrees C, and assess recovery of the corals following exposure. Overall, S. pistillata exhibited remarkably similar responses to acute …

Fast And Pervasive Transcriptomic Resilience And Acclimation Of Extremely Heat-Tolerant Coral Holobionts From The Northern Red Sea, Romain Savary, Daniel J. Barshis, Christian R. Voolstra, Anny Cárdenas, Nicolas R. Evensen, Guilhem Banc-Prandi, Maoz Fine, Anders Meiborn

Biological Sciences Faculty Publications

Corals from the northern Red Sea and Gulf of Aqaba exhibit extreme thermal tolerance. To examine the underlying gene expression dynamics, we exposed Stylophora pistillata from the Gulf of Aqaba to short-term (hours) and long-term (weeks) heat stress with peak seawater temperatures ranging from their maximum monthly mean of 27 °C (baseline) to 29.5 °C, 32 °C, and 34.5 °C. Corals were sampled at the end of the heat stress as well as after a recovery period at baseline temperature. Changes in coral host and symbiotic algal gene expression were determined via RNA-sequencing (RNA-Seq). Shifts in coral microbiome composition were …

Global Extinction Risk For Seahorses, Pipefishes And Their Near Relatives (Syngnathiformes), Riley A. Pollom, Gina M. Ralph, Caroline M. Pollock, Amanda C.J. Vincent

Biological Sciences Faculty Publications

Few marine taxa have been comprehensively assessed for their conservation status, despite heavy pressures from fishing, habitat degradation and climate change. Here we report on the first global assessment of extinction risk for 300 species of syngnathiform fishes known as of 2017, using the IUCN Red List criteria. This order of bony teleosts is dominated by seahorses, pipefishes and seadragons (family Syngnathidae). It also includes trumpetfishes (Aulostomidae), shrimpfishes (Centriscidae), cornetfishes (Fistulariidae) and ghost pipefishes (Solenostomidae). At least 6% are threatened, but data suggest a mid-point estimate of 7.9% and an upper bound of 38%. Most of the threatened species are …

Variation In Coral Thermotolerance Across A Pollution Gradient Erodes As Coral Symbionts Shift To More Heat-Tolerant Genera, Melissa S. Naugle, Thomas A. Oliver, Daniel J. Barshis, Ruth D. Gates, Cheryl A. Logan

Biological Sciences Faculty Publications

Phenotypic plasticity is one mechanism whereby species may cope with stressful environmental changes associated with climate change. Reef building corals present a good model for studying phenotypic plasticity because they have experienced rapid climate-driven declines in recent decades (within a single generation of many corals), often with differential survival among individuals during heat stress. Underlying differences in thermotolerance may be driven by differences in baseline levels of environmental stress, including pollution stress. To examine this possibility, acute heat stress experiments were conducted on Acropora hyacinthus from 10 sites around Tutuila, American Samoa with differing nutrient pollution impact. A threshold-based heat …

Differential Patterns Of Microbiota Recovery In Symbiotic And Aposymbiotic Corals Following Antibiotic Disturbance, Shavonna M. Bent, Carolyn A. Miller, Koty H. Sharp, Colleen M. Hansel, Amy Apprill

Arts & Sciences Faculty Publications

Microbial relationships are critical to coral health, and changes in microbiomes are often exhibited following environmental disturbance. However, the dynamics of coral-microbial composition and external factors that govern coral microbiome assembly and response to disturbance remain largely uncharacterized. Here, we investigated how antibiotic-induced disturbance affects the coral mucus microbiota in the facultatively symbiotic temperate coral Astrangia poculata, which occurs naturally with high (symbiotic) or low (aposymbiotic) densities of the endosymbiotic dinoflagellate Breviolum psygmophilum. We also explored how differences in the mucus microbiome of natural and disturbed A. poculata colonies affected levels of extracellular superoxide, a reactive oxygen species thought to …

Benthic Microalgae Response To A Warming Climate And Shift In Foundational Vegetation Species In A Saltmarsh-Mangrove Ecotone, Gabriela Canas

UNF Graduate Theses and Dissertations

The ecotone in Northeast Florida is experiencing rapid change as mangroves begin to encroach northward into saltmarsh dominated coastal wetlands. This is especially prevalent within the boundaries of the Guana Tolomato Matanzas National Estuarine Research Reserve where studies are attempting to understand the consequences of more mangroves. Although we are beginning to understand some of the implications of this shift in dominant vegetation, the true effects and the accompanying sustained climatic warming effects on the resilience of wetland habitats and their associated communities remains unknown. Primary producers such as benthic microalgae (BMA) are important food sources in both mangrove and …

Reproductive Biology Of The Spinner Shark Carcharhinus Brevipinna, Off The Southeast U.S. Coast, Kristin K. Palmrose

UNF Graduate Theses and Dissertations

The spinner shark, Carcharhinus brevipinna, is a large coastal shark species that is common on the U.S. southeast coast and caught in both commercial and recreational fisheries. Little research has been conducted on the life history of C. brevipinna in the Northwestern Atlantic, presenting challenges for fishery management. This is especially true for reproductive biology, warranting a need to determine how rapidly individuals are reproducing and contributing to the population. This study aimed to characterize reproduction in C. brevipinna by determining size-at-maturity, reproductive seasonality, periodicity, and fecundity. This was accomplished by analyzing changes in reproductive tract morphology and histology, …

Response Of Fish And Invertebrate Larvae To Backreef Sounds At Varying Distances: Implications For Habitat Restoration, Emily R. Anderson, Jack Butler, Mark J. Butler

Biological Sciences Faculty Publications

Underwater sound is used by many marine larvae to orient to coastal habitats including backreef, sponge-dominated hardbottom habitat in the Florida Keys (FL, United States)—a particularly “noisy” coastal habitat. However, the distance over which acoustic cues are attractive to settlement-stage larvae is generally unknown. We examined this phenomenon in a region of the Florida Keys where mass sponge die-offs have diminished both underwater soundscapes and larval settlement. The absence of pronounced hardbottom-associated sound over such a large area allowed us to experimentally test in situ the response of fish and invertebrate larvae to broadcasted sounds at different distances from their …