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Louisiana State University

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Articles 61 - 90 of 155

Full-Text Articles in Genetics and Genomics

The Impact Of Co2-Related Ocean Acidification On The Molecular Regulation Of Shell Development In The Eastern Oyster (Crassostrea Virginica)., Mackenzie L. Richards Nov 2017

The Impact Of Co2-Related Ocean Acidification On The Molecular Regulation Of Shell Development In The Eastern Oyster (Crassostrea Virginica)., Mackenzie L. Richards

LSU Master's Theses

Eastern oysters (Crassostrea virginica), native to the Gulf of Mexico, are keystone species in estuarine ecosystems and are economically valued. Current research indicates that ocean acidification adversely affects the physiology and morphology of larval oysters, but the molecular mechanisms of this impact remain unstudied. Ocean acidification is contributed to by elevated atmospheric CO2 due to increased anthropogenic activities, causing heightened partial pressure of CO2 (pCO2), and eutrophication from land-based runoff in the Gulf. The objective of this work was to determine the genomic response of the eastern oyster in Louisiana to simulated ocean acidification. …


The Role Of Histone H2a.Z Abundance In Modulating Responses To Phosphorus Deficiency In Rice, Sara Zahraeifard Nov 2017

The Role Of Histone H2a.Z Abundance In Modulating Responses To Phosphorus Deficiency In Rice, Sara Zahraeifard

LSU Doctoral Dissertations

Histone variants contribute to chromatin complexity by creating specialized nucleosomes. Here, to investigate the pattern of H2A.Z histone variant distribution and its role in modulating gene expression in rice (Oryza sativa L.), we performed genome-wide profiling of ARP6-dependent H2A.Z deposition in rice seedlings. We demonstrated that under controlled conditions, the majority of H2A.Z deposition is within protein-coding genes (PCG), and the most highly expressed genes are enriched with H2A.Z at their 5’ ends near the transcription start site (TSS), whereas the medium- to low-expressed genes contain H2A.Z across the entire gene. Based on H2A.Z deposition, we categorized genes into …


Virulence Phenotypes Of Rotylenchulus Reniformis: Evaluation Of Host Status Of Cotton And Utility Of Single Nucleotide Polymorphisms (Snps) For Identification, Churamani Khanal Nov 2017

Virulence Phenotypes Of Rotylenchulus Reniformis: Evaluation Of Host Status Of Cotton And Utility Of Single Nucleotide Polymorphisms (Snps) For Identification, Churamani Khanal

LSU Doctoral Dissertations

Comparative reproduction and pathogenicity of reniform nematode (Rotylenchulus reniformis) populations derived from single-egg masses and collected form West Carroll (WC), Rapides (RAP), Morehouse (MOR), and Tensas (TEN) parishes in Louisiana were evaluated in microplot and greenhouse trials. Data from microplot trials showed significant differences among isolates of reniform nematode in both reproduction and pathogenicity on upland cotton (Gossypium hirsutum) cultivars Phytogen 499 WRF, Deltapine 1133 B2RF, and Phytogen 333 WRF. Across all cotton cultivars, MOR and RAP isolates had the greatest and the least reproduction values of 331.8 and 230.2, respectively. Reduction in plant dry weight, …


Interaction Of Cocoa Powder With Intestinal Microbiota, Martha M. Escoto Sabillon Oct 2017

Interaction Of Cocoa Powder With Intestinal Microbiota, Martha M. Escoto Sabillon

LSU Master's Theses

Cocoa is the fully fermented and dried seed of the cacao tree (Theobroma cacao L.) which has prebiotic properties, due to their high concentration of polyphenols. Therefore, the ingestion of cocoa could cause changes in the proportions of the intestinal microbiota that can influence the intestinal immune response. The objective of this study was to determine the effect of alkalization process of the cocoa bean in the diversity of the gut microbiota. The samples were “lavado” unprocessed cocoa powder, “natural” unprocessed cocoa powder, “D-11-S” as alkalized cocoa powder, “D-11-B” heavily alkalized cocoa powder, and raw cocoa “shells” and a control …


First Record Of The Non-Native Suckermouth Armored Catfish Hypostomus Cf. Niceforoi (Fowler 1943) (Siluriformes: Loricariidae) From Central America, Wilfredo A. Matamoros, Caleb D. Mcmahan, Carlos R. Mejia, Parker H. House, Jonathan W. Armbruster, Prosanta Chakrabarty Jul 2016

First Record Of The Non-Native Suckermouth Armored Catfish Hypostomus Cf. Niceforoi (Fowler 1943) (Siluriformes: Loricariidae) From Central America, Wilfredo A. Matamoros, Caleb D. Mcmahan, Carlos R. Mejia, Parker H. House, Jonathan W. Armbruster, Prosanta Chakrabarty

Occasional Papers of the Museum of Natural Science, Louisiana State University

We document the first record of Hypostomus cf. niceforoi in Central America. Two specimens of these suckermouth armored catfishes were collected in Lake Nicaragua (Nicaragua) and identified as H. cf. niceforoi. Hypostomus niceforoi is endemic to Andean streams of Colombia, Venezuela, Ecuador, and Peru. We hypothesize that its introduction in Central America is related to the aquarium trade, as is the case of other armored catfish species introductions.


Gazetteer And Site-Based History Of The Ornithology Of Sabah. Malaysian Borneo, Frederick H. Sheldon Oct 2015

Gazetteer And Site-Based History Of The Ornithology Of Sabah. Malaysian Borneo, Frederick H. Sheldon

Occasional Papers of the Museum of Natural Science, Louisiana State University

The gazetteer lists sites in the state of Sabah, Malaysia, where birds have been collected, studied, or watched. Its purpose is to identify locations for research and birding in Sabah and to provide a brief scientific history of the more important sites. Each site description includes latitude, longitude, and general information on location. For many sites, elevation, habitat, scientific or birdwatching importance, historical notes, citations of key papers, specimen records, and records of certain species are also included.


A Consensus Taxonomy For The Hawaiian Honeycreepers, H. Douglas Pratt Oct 2014

A Consensus Taxonomy For The Hawaiian Honeycreepers, H. Douglas Pratt

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Comments On Some African Taxa Of Leptotyphlopid Snakes, Jeff Boundy Sep 2014

Comments On Some African Taxa Of Leptotyphlopid Snakes, Jeff Boundy

Occasional Papers of the Museum of Natural Science, Louisiana State University

Miscellaneous material of African Leptotyphlopidae are discussed: An overlooked senior synonym of Namibiana latifrons, mental scale characteristics in Tricheilostoma greenwelli, an insular record of Leptotyphlops pembae, a range expansion of Myriopholis adleri (new to the country of Ghana), and cephalic scale terminology of Rhinoleptus koniagui.


Birds In Peatswamp At Klias Forest Reserve And Environs, Sabah, Malaysian Borneo, Frederick H. Sheldon, Geoffrey Davison, Anna Wong, Robert G. Moyle Apr 2014

Birds In Peatswamp At Klias Forest Reserve And Environs, Sabah, Malaysian Borneo, Frederick H. Sheldon, Geoffrey Davison, Anna Wong, Robert G. Moyle

Occasional Papers of the Museum of Natural Science, Louisiana State University

Periodically from 1998-2004, we surveyed birds in the Klias Forest Reserve, which is one of the last remaining pockets of peatswamp in western Sabah. We report here on those surveys. We also review prior work on birds in peatswamp and swamp forest in the Klias-Sipitang region of Sabah as it relates to the conservation of habitat and birds specialized on peatswamp. Peatswamp forest is in jeopardy from development and fires throughout Borneo, and particularly in the Malaysian State of Sabah, which had very little to start. Peatswamp in the Klias area is of particular importance for conservation and bird watching …


Notes On The Avifauna Of The Floodplain Forest Of The Rio Mamoré, Beni, Bolivia, With A Description Of The Juvenile Plumage Of Unicolored Thrush (Turdus Haplochrous) (Aves: Turdidae), Ryan S. Terrill, Miguel Angel Aponte Justiniano, Michael G. Harvey, Glenn F. Seeholzer, Rosa Ines Strem Mar 2014

Notes On The Avifauna Of The Floodplain Forest Of The Rio Mamoré, Beni, Bolivia, With A Description Of The Juvenile Plumage Of Unicolored Thrush (Turdus Haplochrous) (Aves: Turdidae), Ryan S. Terrill, Miguel Angel Aponte Justiniano, Michael G. Harvey, Glenn F. Seeholzer, Rosa Ines Strem

Occasional Papers of the Museum of Natural Science, Louisiana State University

Notes on the avifauna of the floodplain forest of the Rio Mamoré, Beni, Bolivia, with a description of the Juvenile plumage of Unicolored Thrush (Turdus haplochrous) – The floodplain forest along the Rio Mamoré is an isolated stretch of riverine forest in the matrix of flooded grassland and gallery forest of the Llanos de Moxos in the department of Beni, Bolivia and contains an understudied avifauna. This habitat potentially represents a stronghold for certain bird taxa. During Dec 2010-Jan 2011, we conducted daily audiovisual censuses, targeted collecting with shotguns, and general collecting with mist-nets for birds at a …


Notes On Bird Species In Bamboo In Northern Madre De Dios, Peru, Including The First Peruvian Record Of Acre Tody-Tyrant (Hemitriccus Cohnhafti), Michael G. Harvey, Daniel F. Lane, Justin Hite, Ryan S. Terrill, Sheila Figueroa Ramírez, Brian Tilston Smith, John Klicka, Walter Vargas Campos Feb 2014

Notes On Bird Species In Bamboo In Northern Madre De Dios, Peru, Including The First Peruvian Record Of Acre Tody-Tyrant (Hemitriccus Cohnhafti), Michael G. Harvey, Daniel F. Lane, Justin Hite, Ryan S. Terrill, Sheila Figueroa Ramírez, Brian Tilston Smith, John Klicka, Walter Vargas Campos

Occasional Papers of the Museum of Natural Science, Louisiana State University

In the southwestern Amazon Basin, large areas of habitat are comprised predominantly of Guadua bamboo. Many bird species occur in or specialize on Guadua-dominated habitats, but little is known about the taxonomy, distribution, and evolutionary history of this avian assemblage. During 2011, we surveyed the surroundings of Iberia, an area with many large Guadua stands in the southern Peruvian Amazon. We found many Guadua specialist bird species and discovered a surprising Andean element to the local avifauna. We present information on Guadua specialists, Andean species, birds of open habitats, and avian migration and reproduction. We provide accounts for species …


Characterization Of Aebp2 Mutant Mice, Arundhati Bakshi May 2013

Characterization Of Aebp2 Mutant Mice, Arundhati Bakshi

Honors Capstones

No abstract provided.


A Path To Success? A Review Of Evolution, Development, And The Predictable Genome By David L. Stern, Hope Hollocher, Charles H. Pence, Grant Ramsey, Michelle M. Wirth Jan 2013

A Path To Success? A Review Of Evolution, Development, And The Predictable Genome By David L. Stern, Hope Hollocher, Charles H. Pence, Grant Ramsey, Michelle M. Wirth

Faculty Publications

No abstract provided.


Staffan Müller-Wille And Hans-Jörg Rheinberger, A Cultural History Of Heredity, Charles H. Pence Jan 2013

Staffan Müller-Wille And Hans-Jörg Rheinberger, A Cultural History Of Heredity, Charles H. Pence

Faculty Publications

No abstract provided.


Mtbindingsim: Simulate Protein Binding To Microtubules, Julia T. Philip, Charles H. Pence, Holly V. Goodson Jan 2012

Mtbindingsim: Simulate Protein Binding To Microtubules, Julia T. Philip, Charles H. Pence, Holly V. Goodson

Faculty Publications

Summary: Many protein–protein interactions are more complex than can be accounted for by 1:1 binding models. However, biochemists have few tools available to help them recognize and predict the behaviors of these more complicated systems, making it difficult to design experiments that distinguish between possible binding models. MTBindingSim provides researchers with an environment in which they can rapidly compare different models of binding for a given scenario. It is written specifically with microtubule polymers in mind, but many of its models apply equally well to any polymer or any protein–protein interaction. MTBindingSim can thus both help in training intuition about …


A Checklist Of The Amphibians And Reptiles Of México, Ernest A. Liner May 2007

A Checklist Of The Amphibians And Reptiles Of México, Ernest A. Liner

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Species Limits Within The Mexican Garter Snakes Of The Thamnophis Godmani Complex, Douglas A. Rossman, Frank T. Burbrink Jul 2005

Species Limits Within The Mexican Garter Snakes Of The Thamnophis Godmani Complex, Douglas A. Rossman, Frank T. Burbrink

Occasional Papers of the Museum of Natural Science, Louisiana State University

The highly variable Thamniphis godmani complex of southern Mexico, comprised of four apparently allopatric populations, was examined by using 28 morphological characters scored on 214 specimens. Character values were tested with univariate and multivariate statistics to determine if populations are morphologically distinct. The results suggest that the four populations represent independently evolving lineages. Four species, three previously undescribed, are recognized in the T. godmani complex. A lectotype is designated for T. godmani. For each species, a diagnosis description of holotype or lectotype, summary of interspecific variation, and statement of distribution are provided. Comparisons are made with T. errans, alleged to …


Variations In The Xenodontid Water Snake Helicops Scalaris Jan, And The Status Of H. Hogei Lancini, Douglas A. Rossman Nov 2002

Variations In The Xenodontid Water Snake Helicops Scalaris Jan, And The Status Of H. Hogei Lancini, Douglas A. Rossman

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Late Cretaceous Mammals And Magnetostratigraphy, Big Bend, Texas, Julia T. Sankey, Wulf Gose Aug 2001

Late Cretaceous Mammals And Magnetostratigraphy, Big Bend, Texas, Julia T. Sankey, Wulf Gose

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


A New Species Of Garter Snake From Western Mexico, Roger Conant May 2000

A New Species Of Garter Snake From Western Mexico, Roger Conant

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


A. F. J. K. Mayer: Anatomy Of The Eye Of The Cetaceans. An Annotated Translation., Heiko L. Shoenfuss Jul 1997

A. F. J. K. Mayer: Anatomy Of The Eye Of The Cetaceans. An Annotated Translation., Heiko L. Shoenfuss

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Variation In The Mexican Garter Snake Thamnophis Scalaris Cope And The Taxonomic Status Of T. Scaliger (Jan), Douglas A. Rossman, Guillermo Lara Gongora Jul 1997

Variation In The Mexican Garter Snake Thamnophis Scalaris Cope And The Taxonomic Status Of T. Scaliger (Jan), Douglas A. Rossman, Guillermo Lara Gongora

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Percina Kathae, A New Logperch Endemic To The Mobile Basin In Mississippi, Alabama, Georgia, And Tennessee (Percidae, Etheostomatini), Bruce A. Thompson Jul 1997

Percina Kathae, A New Logperch Endemic To The Mobile Basin In Mississippi, Alabama, Georgia, And Tennessee (Percidae, Etheostomatini), Bruce A. Thompson

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Percina Suttkusi, A New Species Of Logperch (Subgenus Percina) From Louisiana, Mississippi, And Alabama (Perciformes, Percidae, Etheostomatini), Bruce A. Thompson Apr 1997

Percina Suttkusi, A New Species Of Logperch (Subgenus Percina) From Louisiana, Mississippi, And Alabama (Perciformes, Percidae, Etheostomatini), Bruce A. Thompson

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


A New Species Of Rock-Dwelling Phyllodactylus (Squamata: Gekkonidae) From The Richtersveld, South Africa, Aaron M. Bauer, William R. Branch, David A. Good Jan 1996

A New Species Of Rock-Dwelling Phyllodactylus (Squamata: Gekkonidae) From The Richtersveld, South Africa, Aaron M. Bauer, William R. Branch, David A. Good

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


A Miocene Hedgehog (Mammalia: Erinaceidae) From Fort Polk In Western Louisiana, Judith A. Schiebout Jan 1996

A Miocene Hedgehog (Mammalia: Erinaceidae) From Fort Polk In Western Louisiana, Judith A. Schiebout

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Percina Austroperca: A New Species Of Logperch (Percidae, Subgenus Percina) From The Choctawhatchee And Escambia Rivers In Alabama And Florida, Bruce A. Thompson Feb 1995

Percina Austroperca: A New Species Of Logperch (Percidae, Subgenus Percina) From The Choctawhatchee And Escambia Rivers In Alabama And Florida, Bruce A. Thompson

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Type Specimens Of Birds In The Museum Of Natural Science, Louisiana State University, Steven W. Cardiff, J. V. Remsen, Jr. Jul 1994

Type Specimens Of Birds In The Museum Of Natural Science, Louisiana State University, Steven W. Cardiff, J. V. Remsen, Jr.

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Mammalogical Type Specimens In The Museum Of Natural Science, Louisiana State University, Mark S. Hafner Mar 1993

Mammalogical Type Specimens In The Museum Of Natural Science, Louisiana State University, Mark S. Hafner

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.


Herpetological Type Specimens In The Museum Of Natural Science, Louisiana State University, Douglas A. Rossman, David A. Good Mar 1993

Herpetological Type Specimens In The Museum Of Natural Science, Louisiana State University, Douglas A. Rossman, David A. Good

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.