Genetics and Genomics Commons^™

Long-Term Environmental Effects Of Conifer Removal To Achieve Aspen Release In Near-Stream Areas Within The Northern Sierras, Kenneth W. Tate, Bobette Jones, Melanie Mcfarland, Tom Rickman, Al Vasquez

Aspen Bibliography

The advanced state of conifer encroachment in aspen stands in the Sierra Nevada and southern Cascades is retarding aspen regeneration, putting an estimated 70 plus percent of stands at immediate risk of extinction with a significant percentage of stands already lost.

Executive Summary The Role Of Ungulate Herbivory And Management On Ecosystem Patterns And Processes: A Problem Analysis, John G. Kie, Martin Vavra

Aspen Bibliography

No abstract provided.

Glycosyltransferases Encoded By Viruses, Nicolas Markine-Goriaynoff, Laurent Gillet, James L. Van Etten, Haralambos Korres, Naresh Verma, Alain Vanderplasschen

James Van Etten Publications

Studies of cellular biology in recent decades have highlighted the crucial roles of glycans in numerous important biological processes, raising the concept of glycomics that is now considered as important as genomics, transcriptomics and proteomics. For millions of years, viruses have been co-evolving with their hosts. Consequently, during this co-evolution process, viruses have acquired mechanisms to mimic, hijack or sabotage host processes that favour their replication, including mechanisms to modify the glycome. The importance of the glycome in the regulation of host–virus interactions has recently led to a new concept called ‘glycovirology’. One fascinating aspect of glycovirology is the study …

Sheep Updates 2003 - Posters, Maxine Brown, Gaye Krebs, Diana Fredorenko, Kathryn Edgerton-Warburton, Evan Burt, Nazrul Islam, Roy Butler, L. G. Butler, S. R. Brown, M. F. D'Antuono, J. C. Greeff, Ken Hart, Tanya Kilminster, Rachel Kirby, M. E. Ladyman, A. C. Schlink, I. H. Williams, P. E. Vercoe, Anyou Lui, Karen Smith, Martin Bent, Matthew Young

Sheep Updates

This session covers eleven papers from different authors:1 Sheep production on annual stubbles/pastures vs lucerne Maxine Brown Gaye Krebs Muresk Institute, Curtin University Diana Fedorenko Kathryn Egerton-Warburton Centre for Cropping Systems, Department of Agriculture Western Australia 2. The value chain of the Lake Grace livestock industry Evan Burt Nazrul Islam Department of Agriculture Western Australia 3. Native pastures, Dorper sheep and the 2002 drought Roy Butler Department of Agriculture Western Australia 4. Commercial sheep breeders can improve their sheep breeding program using wether trials L.G. Butler, S.R. Brown, M.F. D’Antuono, J.C. Greeff Department of Agriculture 5. Western Australia Linked ewe …

Some Environmental Relationships Of Undergrowth Species In Aspen Communities Of The Intermountain West, W F. Mueggler

Aspen Bibliography

This analysis results from an opportunity to explore plant-environmental relationships from data collected for a different purpose. Origin of the data is a study designed to develop an aspen community-type classification for southern Idaho, western Wyoming, Utah, and Nevada which resulted in the publication "Aspen Community Types of the Intermountain Region" GTR INT-250 by W.F. Mueggler (1988).

A Bt Transgene Reduces Herbivory And Enhances Fecundity In Wild Sunflowers, A. A. Snow, Diana Pilson, L. H. Rieseberg, M. J. Paulsen, N. Pleskac, M. R. Reagon, D. E. Wolf, S. M. Selbo

Diana Pilson Publications

Gene flow from transgenic crops can introduce novel traits into related species, but the ecological importance of this process is unknown. Here, we report the first empirical evidence that wild plants can benefit from a bacterial transgene under uncaged, natural conditions. Cultivated sunflower (Helianthus annuus) is known to hybridize frequently with wild sunflower (H. annuus) in the western and midwestern United States. We studied a crop-developed Bacillus thuringiensis (Bt) transgene, cry1Ac, in backcrossed wild sunflower populations. Lepidopteran damage on transgenic plants was strongly reduced relative to control plants at our two study sites, while damage …

Good Intentions May Doom Aspen Groves, James R. Fazio

Aspen Bibliography

If there were a Guiness Book of World Records for trees, quaking aspen would be in it - not once but probably several times.

Compensation For Herbivory In Wild Sunflower: Response To Simulated Damage By The Head-Clipping Weevil, Diana Pilson, Karin L. Decker

Diana Pilson Publications

Herbivore damage is generally detrimental to plant fitness, and the evolutionary response of plant populations to damage can involve either increased resistance or increased tolerance. While characters that contribute to resistance, such as secondary chemicals and trichomes, are relatively well understood, characters that contribute to a plant’s ability to tolerate damage have received much less attention. Using Helianthus annuus (wild sunflower) and simulated damage of Haplorhynchites aeneus (head-clipping weevil) as a model system, we examined morphological characters and developmental processes that contribute to compensatory ability. We performed a factorial experiment that included three levels of damage (none, the first two, …

Genetic Variability Studies In A Selected Population Of Azadirachta Excelsa (Sentang) With Aflp Marker Technology, Chiew Foan Chin

Student Works (2000-2009)

A maternal half-s/b population of Azadirachta excelsa was established from seeds in a randomised complete block design with three replicates. 100 to 200 seeds were collected from each of the 13 selected mother trees. The mother trees were categorised into three groups i.e. large, medium and small according to their girth sizes. 50 progeny seedlings from each scedlot per replicate were planted in the experimental field. Genetic studies on phenotypic measurements and molecular marker analysis were carried out on the established A. excelsa population. Measurements of quantitative traits including diameter breast height (Dbh) and total height were made. Mean Dbh …

Identification Of Chromosomes In Plants Using Standard Staining Techniques, L. Michael Hill Ph.D.

Biology Faculty Scholarship

No abstract provided.

Characterization Of Natural Variants Of Local Wild Bananas & Seed Progeny Of Musa Acuminata, Muhammad Asif Javed

Student Works (2000-2009)

The purpose of this study was to characterize the variation pattern that exists in the wild Musa acuminata (AA) populations. widely distributed in Malaysia. Fourteen populations of Musa acuminata, which included subspecies malaccensis, siamea and truncata were collected from different locations including Selangor, Pahang, Perak, Kelantan, Kedah and Terengganu for studies on variation within and between populations, based on morphological characters, biochemical, ploidy and genomic DNA content. Techniques of numerical taxonomy were employed to determine the variation pattern and these included use of the clustering method and principal component analysis. Ploidy level and genomic DNA content were determined by flow …

Origin And Conservation Genetics Of Threatened Ute Ladies’-Tresses, Spiranthes Diluvialis (Orchidaceae), Allen L. Szalanski, Gerry Steinauer, Richard Bischof, Jessica Lynn Petersen

Department of Animal Science: Faculty Publications

The Ute ladies’-tresses, Spiranthes diluvialis, is listed as a threatened orchid in west-central United States by the Federal government. Information on its origin and patterns of genetic variation is needed to develop effective conservation strategies for this species. DNA sequencing and polymerase chain reaction–restriction fragment length polymorphism (PCR-RFLP) was used to evaluate genetic variation and structure of 23 populations of S. diluvialis. In addition, four congeneric species were analyzed to determine possible origins of the putative allotetraploid S. diluvialis. DNA sequencing and PCR-RFLP analysis of the nuclear ribosomal internal transcribed spacer (ITS) and mitochondrial and chloroplast DNA …

The Effect Of Aspen Wood Characteristics And Properties On Utilization, Kurt H. Mackes, Dennis L. Lynch

Aspen Bibliography

This paper reviews characteristics and properties of aspen wood, including anatomical structure and characteristics, moisture and shrinkage properties, weight and specific gravity, mechanical properties, and processing characteristics. Uses of aspen are evaluated: sawn and veneer products, composite panels, pulp, excelsior, post and poles, animal bedding, animal food supplements, fuel applications, and novelties. Aspen is a preferred species for paneling, veneer products including matchsticks and chopsticks, waferboard and oriented strandboard (OSB), fiberboard, pulp, excelsior, research animal bedding, animal food supplements, and tourist or gift items.

Biotechnology In Western Australian Agriculture, Agriculture Western Australia

Grain and other field crops published reports

The Government of Western Australia believes that the strategic use of biotechnology and particularly gene technology has the potential to offer Western Australian agriculture significant economic benefits by improving the productivity and quality of products, as well as contributing to the development of sustainable farming systems.

Information contained in these binders is intended to give an overview of Biotechnology in relation to what is occurring in Australia, in Western Australia and specifically, at Agriculture Western Australia (AGWEST).

Biotechnology has been around for twenty-five years or more, but has only recently become a public issue in Australia - particularly in relation …

Can Large Dsdna-Containing Viruses Provide Information About The Minimal Genome Size Required To Support Life?, James L. Van Etten

James Van Etten Publications

The genomes of a few viruses, such as Bacillus megaterium phage G (670 kb) and the chlorella viruses (330 to 380 kb), are larger than the predicted minimal genome size required to support life (ca. 320 kb). A comparison of the 256 proteins predicted to be required for life with the putative 376 proteins encoded by chlorella virus PBCV-1, as well as those encoded by other large viruses, indicates that viruses lack many of these “essential” genes. Consequently, it is unlikely that viruses will aid in determining the minimal number and types of genes required for life. However, viruses may …

Plant Hybrid Zones And Insect Host Range Expansion, Diana Pilson

Diana Pilson Publications

The hybrid bridge hypothesis suggests that plant hybrids ‘‘bridge’’ the genetic gap between actual and potential host species, and that, for this reason, herbivorous insects are more likely to evolve an expanded host range in the presence of hybrids. While intuitively appealing, the hypothesis has two implicit assumptions: that phenotypic gaps between potential hosts limit host range, and that characters controlling host use are additively inherited in plant hybrids. Evaluation of these assumptions suggests that operation of the hybrid bridge hypothesis is relatively uncommon. In addition, the hypothesis has not been well integrated into existing theoretical and empirical work on …

An Investigation Of Crystalline Intensity Of The Wood Of Poplar Clones Grown In Jiangsu Province, China, Bernard R. Parresol, Fuliang Cao

Aspen Bibliography

No abstract provided.

Identification Of Poinsettia Cultivars Using Rapd Markers, Jing-Tian Ling, Roger Sauve, Nick Gawel

Agricultural and Environmental Sciences Faculty Research

Randomly amplified polymorphic DNA (RAPD) techniques were used to compare the DNA from leaf tissues of nine commercial poinsettia (Euphorbia pulcherrima Wild ex Klotzsch) cultivars. Amplification occurred in 57 out of 60 (95%) tested primers. Nine primers that revealed polymorphisms among cultivars were selected for further evaluation. Forty-eight RAPD bands were scored from these primers, and 33 (69%) were polymorphic. All tested cultivars could be discriminated with seven bands generated from primers OPB7 and OPC13. Results of a UPGMA cluster analysis and principal components analysis placed the nine cultivars into two groups: one group consisted of `Jingle Bells', `Supjibi', …

Selection Of Populations Of Puccinia Recondita F. Sp. Tritici For Shortened Latent Period On A Partially Resistant Wheat Cultivar, Jeffery S. Lehman, Gregory Shaner

Biology and Earth Science Faculty Scholarship

Wild-type fungal population 851-WT was selected for shortened latent period on cv. CI 13227 for five uredinial generations to study the adaptation of Puccinia recondita f. sp. tritici to partially resistant wheat cultivars. Differences among wild-type and selected populations for traits contributing to parasitic fitness (i.e., latent period, infection frequency, and uredinium area and growth rate) were assessed in monocyclic infection experiments on susceptible cv. Monon and partially resistant cvs. Suwon 85, Sw 72469-6, L-574-1, and CI 13227. Differences were greatest among fungal populations on cv. CI 13227. The mean latent period of selected population 851-C5 was 2 days shorter …

Parade Of Presidents, John L. Artz

Aspen Bibliography

No abstract provided.

Genome-Wide High-Resolution Mapping By Recurrent Intermating Using Arabidopsis Thaliana As A Model, Sin-Chieh Liu, Stanley Kowalski, Tien-Hung Lan, Kenneth A. Feldmann, Andrew H. Patterson

Law Faculty Scholarship

We demonstrate a method for developing populations suitable for genome-wide high-resolution genetic linkage mapping, by recurrent intermating among F2 individuals derived from crosses between homozygous parents. Comparison of intermated progenies to F2 and “recombinant inbred” (RI) populations from the same pedigree corroborate theoretical expectations that progenies intermated for four generations harbor about threefold more information for estimating recombination fraction between closely linked markers than either RI-selfed or F2 individuals (which are, in fact, equivalent in this regard) . Although intermated populations are heterozygous, homozygous “intermated recombinant inbred” (IN) populations can readily be generated, combining additional information afforded by intermating with …

Stand Hazard Rating For Central Idaho Forests, Robert Steele, Ralph E. Williams, Julie C. Weatherby, Elizabeth D. Reinhardt, James T. Hoffman, R. W. Thier

Aspen Bibliography

No abstract provided.

Fire-Bgc--A Mechanistic Ecological Process Model For Simulating Fire Succession On Coniferous Forest Landscapes Of The Northern Rocky Mountains, Robert E. Keane, Penelope Morgan, Steven W. Running

Aspen Bibliography

An ecological process model of vegetation dynamics mechanistically simulates long-term stand dynamics on coniferous landscapes of the Northern Rocky Mountains. This model is used to investigate and evaluate cumulative effects of various fire regimes, including prescribed burning and fire exclusion, on the vegetation and fuel complex of a simulation landscape composed of many stands. Detailed documentation of the model FIRE-BGC (a FIRE BioGeoChemical succession model) with complete discussion of all model parameters is followed with results of an application of the FIRE-BGC to a whitebark pine landscape in the Bob Marshall Wilderness Complex. Simulation results of several management scenarios are …

Waste-Wood-Derived Fillers For Plastics, Brent English, Craig M. Clemons, Nicole Stark, James P. Schneider

Aspen Bibliography

Filled thermoplastic composites are stiffer, stronger, and more dimensionally stable than their unfilled counterparts. Such thermoplastics are usually provided to the end-user as a precompounded, pelletized feedstock. Typical reinforcing fillers are inorganic materials like talc or fiberglass, but materials derived from waste wood, such as wood flour and recycled paper fiber, are also effective as fillers. The goal of this project was to generate commercial interest in using waste-wood–paper-derived fillers (WPFs) to reinforce thermoplastics. The research strategy was twofold: developmental research and outreach. Specific objectives were (1) to improve wastepaper fiber preparation, feeding, and compounding methods, and optimize composite performance, …

Soldier's Guide To Wildlands Of Camp W. G. Williams, Thomas Hysell, Margaret Pettis

Aspen Bibliography

No abstract provided.

Plant Community Changes Over 54 Years Within The Great Basin Experimental Range, Manti-La Sal National Forest, Scott C. Walker, David K. Mann, E. Durant Mcarthur

Aspen Bibliography

Plant community changes and natural succession over time impact forage values, watershed quality, wildlife habitat, and ecosystem dynamics. Comparisons were made between a vegetation map of community types completed in 1937 by the U.S. Forest Service, and vegetation maps compiled in 1990 of the same areas by satellite imagery, and through 1991 areal photo interpretation combined with ground truthing. The study area includes nearly all of the drainage in Ephraim Canyon located in central Utah which consists of 6,027 acres (2,439 ha). Elevation ranges from 6,600 to 10,400 feet (2,040 to 3,210 m). Vegetation types ranged from pinyon-juniper woodland through …

Biotechnology : Exposing The Myths & Realities, Sue Sutherland, Alan Lymbery

Journal of the Department of Agriculture, Western Australia, Series 4

Biotechnology has become one of the buzz words of the 1990s. Sounds impressive but what's it all about? Sue Sutherland and Alan Lymbery unravel some of the jargon and explore its potential for Western Australian agriculture.

Southern Idaho's Forest Land Outside National Forests, 1991, David C. Chojnacky

Aspen Bibliography

No abstract provided.

Pulpwood Production In The Lake States, 1993, Ronald J. Piva

Aspen Bibliography

Pulpwood production in the Lake States increased from 8.8 million cords in 1992 to 9.4 million cords in 1993. Michigan, Minnesota, and Wisconsin pulpwood production is shown by county and species group.

Use Of Sulfometuron In Hybrid Popular Energy Plantations, Daniel A. Netzer

Aspen Bibliography

No abstract provided.