Forest Biology Commons^™

Towards The Identification Of The Soil Fungal Microbiome Community Associated With Longleaf Pine, Joshua Inneh, Grace Krueger, Ian Thomasson, Fletcher Moon, Geoffrey Eger

Symposium of Student Scholars

This project is part of a larger study looking at the restoration of the Longleaf Pine (LLP) ecosystem in certain Wildlife Management Areas (WMA) in Northwest Georgia. Our long-term aim is to look for potential associations between the aboveground and belowground community structures as the complex system of feedback mechanisms between the soil microbiome, the rhizosphere, and the plant communities is not yet understood.

Soil samples were collected from a total of six plots in the Sheffield WMA located in Paulding County. The samples were collected from north or south facing hillside plots except for in the savanna sites (an …

Interspersed Denuded Zone (Idz): How Patchy Leaf Litter Dynamics In A Buckthorn-Invaded Urban Woodland Can Affect Microarthropod Species Richness, Angela Stenberg

DePaul Discoveries

Biodiversity loss may serve as a key diagnostic of the Anthropocene. An important driver of this loss is by means of invasive species. In this study of a forest preserve in Chicago, Illinois we examined Interspersed Denuded Zones (IDZs for short), which are areas of patchy leaf litter in invaded forests caused in this case by the rapid decomposition of litter from buckthorn (Rhamnus cathartica). We characterized the leaf litter mass in IDZs and enumerated litter-inhabiting microarthropod populations. We found that plots of high buckthorn density are associated with IDZs: there was significantly less leaf litter mass in …

Beaver Reintroduction And Its Potential As An Ecological Conservation Measure For At-Risk Amphibian Species In The Pacific Northwest, Danielle Schwantes

University Honors Theses

Amphibian decline is a major concern in the Pacific Northwest (PNW), with many amphibian species listed as sensitive, threatened or endangered throughout the region. Some of the predicted main causes of amphibian decline are climate change and loss of habitat. The reintroduction of beavers into ecoregions of the PNW could be an important step in the conservation of this region’s amphibians, due to the beaver’s ability to engineer and structurally manipulate forest ecosystems. Beavers are able to restore wetland quality, productivity and biodiversity, creating vital amphibian habitat. This work explored the linkage between beaver presence and wetland hydrology, geomorphology, landscape …

Analysis Of Symptom Expressions And Transmission Rates Caused By The Plant Pathogen Phytophthora Ramorum On Native Chaparral Plants From The Genus Arctostaphylos, Bharati Gaonker

Natural Sciences and Mathematics | Biological Sciences Master's Theses

Phytophthora ramorum is the causal agent of Sudden Oak death (SOD), ramorum dieback and ramorum leaf blight which affect both forest environments and nurseries. This oomycete pathogen has had a huge economic impact on the nursery and lumber industry. Forests in California have experienced substantial mortality of oaks affecting the forest dynamics and diversity. Our research investigates four native species and two ornamental cultivars of plants, which belong to the genus Arctostaphylos (manzanita) and are considered to be new hosts for P. ramorum in the chaparral ecosystem of California. Symptom expression and transmission rates were analyzed on Arctostaphylos glauca, …

Salicylic Acid Response To Simulated Herbivory In Geographically Distinct T. Heterophylla And H. Discolor Populations, Amy E. Castle

Honors Projects

It is commonly known that plants may produce salicylic acid as a chemical defense response to wounding, although the phenomenon has usually been observed with regard to insect herbivory. Stem and leaf tissue of two species, Tsuga heterophylla and Holodiscus discolor, which are often eaten by deer, were extracted in methanol and analyzed by HPLC to quantify salicylic acid concentration in experimentally wounded or control samples. No salicylic acid response was detectable in T. heterophylla, suggesting it is a less useful candidate species for future study. Some but not all H. discolorsamples had a measurable salicylic acid …

Soil Macroinvertebrates Responses To Wildfires In The Blue Ridge Mountains, Usa, Madeline Olliff

Biology Theses

Fire has been a prevalent disturbance on Earth for millions of years. Around the globe there are several regions that have become fire adapted, including the Southeastern United States. There have been few studies examining the effects of wildland fires on soil macroinvertebrates in the Blue Ridge Mountains, in spite of the importance of these animals to soil processes and their contributions to the biodiversity of these ecosystems. During the fall of 2016, the Southeastern USA experienced numerous, large wildfires. These fires offered an opportunity to study the effects of wildland fire on soil macroinvertebrates. We sampled sites from three …

Analysis Of The White-Tailed Deer Population Of Hobbs State Park, Jesse Morrison

Biological and Agricultural Engineering Undergraduate Honors Theses

White Tailed deer (Odocoileus virginianus) are the only deer species native to Arkansas, playing a crucial role in the ecosystem. Healthy deer populations are important for environmental and human wellbeing, and overpopulation can lead to poor herd health, overgrazing, increased vehicle collisions, and transmission of diseases. Monitoring deer populations through surveys can be a useful tool in managing wildlife and maintaining Arkansas’ natural resources.

This study analyzed trends in Hobbs State Park’s deer population and estimated the current roadside deer population of the park. Data from past surveys was analyzed for trends using a Mann-Kendall Test, and a distance sampling …

Assessing And Mapping The Spatial-Temporal Change In Forest Phenology Of Arabuko-Sokoke Forest Using Moderate Resolution Satellite, Bailey Ytterdahl

Independent Study Project (ISP) Collection

This study focuses on coastal forests in Kenya that have some of the highest variety of flora and fauna, specifically Arabuko Sokoke Forest. Arabuko Sokoke Forest is located 110 miles north of Mombasa and 18 kilometers south of Malindi. This forest is known to be a worldwide biodiversity hotspot that is home to endemic and rare plants and animals. Within the Arabuko Sokoke Forest ecosystem, there are two main issues that challenge the conservation of the area. First, there has been more competition for land, primarily for agriculture and development. Second, there is an increase demand for forest resources due …

Seed Rain–Successional Feedbacks In Wet Tropical Forests, Nohemi Huanca Nuñez, Robin L. Chazdon, Sabrina E. Russo

School of Biological Sciences: Faculty Publications

Abstract

Tropical forest regeneration after abandonment of former agricultural land depends critically on the input of tree seeds, yet seed dispersal is increasingly disrupted in contemporary human-modified landscapes. Here, we introduce the concept of seed rain–successional feedbacks as a deterministic process in which seed rain is shaped by successional dynamics internal to a forest site and that acts to reinforce priority effects. We used a combination of time series and chronosequence approaches to investigate how the quantity and taxonomic and functional composition of seed rain change during succession and to evaluate the strength of seed rain–successional feedbacks, relative to other …

Seasonal Variation In Home-Range And Core-Area Size In Verreaux's Sifaka, Brynn Harshbarger

Theses, Dissertations and Capstones

Primates living in seasonal forests must adapt to extreme fluctuation in resource availability. Verreaux’s sifaka ( ) live in Madagascar’s highly seasonal tropical dry forests and experience periods of extreme resource abundance and scarcity. Home- range and core-area size were measured using 95% and 50% kernel estimation, and 95% minimum convex polygons to compare seasonal shifts in space use based on resource availability. There have been no long-term space use studies on Verreaux’s sifaka; therefore, we do not know how their space use changes over time in an environment which is both highly seasonal and highly variable. Our study leverages …

The Effects Of Fire On Oak-Forest Plant Communities Along Soil Moisture Gradients: A 25-Year Study, Rebekah Frances Shupe

Theses, Dissertations and Capstones

In the eastern U.S., fire is a natural disturbance process in Quercus (oak) forests. Fire is thought to promote oak regeneration and plant diversity by reducing competition, preparing a suitable seedbed, and increasing light availability. However, the era of fire suppression that began in the early 20^th century is thought to have negatively impacted oak regeneration and the biodiversity of the understory layer. In this study, we examined the effects of prescribed fire on tree regeneration and the understory layer over 25 years. From a study initiated in 1994, we resampled 45 permanent vegetation plots measuring 1250 m^{2 …}

The Ecological Resilience Of A Tropical Montane Pine Forest To Droughts, Fire, And Hurricane Disturbance, Daniel Erland Brugger Swann

Electronic Theses and Dissertations

Owing to the geographic isolation and unique climatic conditions which occur in tropical montane forests (TMFs), these systems are highly sensitive to changes in both climate and disturbance. Therefore, as ongoing climate change alters disturbance regimes – potentially facilitating multiple disturbance interactions much greater than that of isolated disturbances – TMFs may be shifted to alternate stable states. However, study of TMF resilience is essentially unknown given the lack of long-term studies in these systems. We address the resiliency of the tropical montane pine forests of the Cordillera Central, Dominican Republic using long-term climate records, remeasured vegetation data, and reconstructed …

Evaluating Immaturity Risk In Young Stands Of The Serotinous Knobcone Pine (Pinus Attenuata), Katherine Marlin

Cal Poly Humboldt theses and projects

As wildfire becomes increasingly frequent, many plant populations risk local extirpation if fire recurs too soon, a problem dubbed “immaturity risk”. We studied the regeneration of a serotinous conifer species, knobcone pine (Pinus attenuata), as a function of the time between high-severity fires (6-79 years). We evaluated age, cone production, and regeneration at two burned sites in northern California, the Ranch Fire (2018) in Mendocino National Forest, and the Carr Fire (2018) in Whiskeytown National Recreation Area. We found an average of 30.5 filled seeds in closed, brown cones (42% viability of filled seeds). The bulk of the …

Beaver Moderated Fire Resistance In The North Cascades And Potential For Climate Change Adaptation, Joseph John Weirich Iii

EWU Masters Thesis Collection

Climate change and fire suppression have altered historic fire regimes, creating conditions for larger, more intense fires. Intense burns can alter watershed hydrology, increasing the potential for harmful channel incision, which impairs riparian ecosystem function by lowering the water table, disconnecting floodplains from aquatic environments. However, wetlands and functioning riparian zones can reduce burn intensity. Beaver, with their unique ability to build dams, can restore incised and degraded streams, store water, and expand wetland environments, potentially decreasing wildfire intensity, fire spread and create fire breaks across the landscape. My objective was to test the hypothesis that beaver impoundments increase landscape …

A Spatiotemporal Assessment Of Fish Assemblage Response To Land-Use Change And The Evaluation Of Edna Metabarcoding For Describing Diverse Fish Communities, Timothy M. Owen

Theses and Dissertations

Fish assemblages are often assessed as a biological proxy for environmental health. While humans value healthy environments for the ecosystem services and recreational opportunities they provide, it is increasingly evident that such resources can be paradoxically degraded by anthropogenic activities. In this investigation, we studied the relationship between different intensities of anthropogenic land-use change and habitat-driven fish assemblage response across multiple spatiotemporal scales. Secondarily, we explored the efficacy of eDNA metabarcoding against conventional electrofishing techniques for the purpose of describing complete fish communities. This study was conducted in the Tuckahoe Creek basin near Richmond, Virginia. This James River tributary serves …

Inoculum Potential Of Pinus Edulis-Associated Ectomycorrhizal Fungi Across A Forest Extirpation Chronosequence, Annie M. Montes

Biology ETDs

Few studies have examined inoculum potential of ectomycorrhizal fungi (EMF) in the absence of plant hosts, yet persistence of these fungi may be paramount to resilience of Pinus edulis and other mycorrhizal plant species. We conducted a study in which seven sites were selected in northwestern New Mexico with known dates of P. edulis extirpation and a lack of regeneration. Age classes included: two sites extirpated 10-20 years ago, two extirpated 55-65 years ago, two extirpated 500+ years ago, and one extirpated 11,000+ years ago. At each site, two plots were paired: an extirpated plot and the nearest live adult …

Research Focus: Depaul’S Tree Whisperer

Scientia

Jalene LaMontagne, a population ecologist and associate professor of biological sciences in DePaul's College of Science and Health, is researching mast seeding of white spruce and the seed cones they produce across the 3,000-mile span of North America to understand the patter of tree behavior along the ecological dipole.

Floodplain Forest Regeneration Dynamics In The Lower Mississippi River Alluvial Valley, Whitney Anne Kroschel

LSU Doctoral Dissertations

Floodplain forest species diversity is driven, in part, by variation in disturbance regime. Flood patterns create heterogeneity in microsite quality from small differences in elevation across a floodplain which, in turn, influence flood timing and duration. Differences in species’ regeneration niches in relation to hydrologic patterns can account for long-term coexistence of various species. In the past century floodplain forests have exhibited a wide range of changes in stand development and species composition as a result of altered hydrology in rivers and floodplains. I evaluated the role of regeneration in floodplain forest systems of the Lower Mississippi River Alluvial Valley …

Modeling Species Distribution And Habitat Suitability Of American Ginseng (Panax Quinquefolius) In Virginia, Jacob D. J. Peters

Masters Theses, 2020-current

American ginseng (Panax quinquefolius) is a well-known and sought-after medicinal plant native to North America that is facing increased threat of extinction due to overharvesting, herbivory, and habitat loss. Species distribution and habitat suitability models may be valuable to landowners interested in sustainable harvest or to institutions interested in the conservation and restoration of the species. With unequal sampling efforts across a region of interest, it is likely that some locations with appropriate habitat may be misrepresented in model predictions. This study refined a state-derived species distribution model for ginseng through increased sampling effort across the Cumberland Plateau …

Shifting Public Perception: Climate Change Means Living With Fire And Smoke, Robert Froembling

Seattle Journal of Technology, Environmental, & Innovation Law

The urgency to prepare for the climate crisis has never been greater. We are currently living in the sixth mass extinction and the effects are only going to accelerate. We will inherit more wildfires, larger wildfires, and more frequent wildfires.

This piece is not meant to stoke fear in its readers or be depressing, but to shift public perception on what our future holds by evaluating the laws and science presented to us. This piece will look at regional and federal regulations and assess the increased rate of forest fires and the grave public health concerns from stagnant smoke specifically …

A Comparative Ecological Study Of Limestone And Dolomite Glades In The Ozark Mountains Of Northwest Arkansas, Brittney Booth

Graduate Theses and Dissertations

Glades are one of the many habitats that exist in the Arkansas Ozarks and contribute to the overall biodiversity of the state of Arkansas. For this study, five dolomite glades and five limestone glades in the Ozarks of northwest Arkansas were studied from March to October in the years 2017 and 2018 to determine the similarities or differences that might be present. One hundred and fifteen vascular plant taxa were documented in the dolomite glades and one hundred and three vascular plant taxa were documented in the limestone glades. Forty-six vascular plant taxa were unique to the dolomite glades and …

A Comparative Taxonomic And Diversity Study Of Litter-Associated Fungi In Northwest Arkansas Forests, Rajaa Abdulrazzaq Abbas Al Aanbagi

Graduate Theses and Dissertations

Fungi are taxonomically the most species-rich group of organisms on the earth, ecologically occupy distinctive niches and interact with diverse other organisms throughout their biogeographic distributions and functionally play key roles through their various lifestyles. Plant litter, in particular, is a keystone component in ecosystems and provides heterogeneous microhabitats for the often overlooked litter-decomposing fungi and other organisms on the floor of temperate deciduous forests. Litter fungi involve indirect interactions with the plant, soil and whole food web network. However, the community structure and functions of litter-associated fungi as well as patterns of species richness distributed across various litter microhabitats …

Subalpine Forest Tree Seedling Response To Drought, Alex Goke

Electronic Theses and Dissertations

Knowledge of tree species’ ability to tolerate drought is necessary to anticipate future forest dynamics with climate change, especially at the seedling stage given their role in shaping forest structure. We used precipitation reduction shelters to mimic drought for subalpine conifer seedlings (A. lasiocarpa and P. engelmannii) in the Rocky Mountains and compared survivorship and morphological and physiological responses to assess relative degrees of drought tolerance. We detected no significant investment in morphological tolerance traits (e.g. root biomass, leaf:stem area ratio) but substantial reductions in net photosynthesis. While shading partially ameliorated drought effects when precipitation reduction was moderate, …

Is Context Dependency Imperative To Understanding The Impacts Of Invasive Plants?, Brendan B. Haile

Masters Theses

Introduced exotic species have a tendency to become invasive and impact local biological communities. Invasions often impact community attributes such as cover and species richness, but these factors may also regulate patterns of invasion. In such cases, impacts may be dependent on the invasion context. We used data from the Buell-Small Succession Study, a long-term permanent plot study in the piedmont region of New Jersey, to document context dependency in invasion. To do this, we analyzed the factors that affected the colonization and growth of four invasive species, Alliaria petiolata, Lonicera japonica, Microstegium vimineum and Rosa multiflora, as well …

Apparent Resilience To Fire Of Native Bee (Hymenoptera: Apoidea) Communities From Upland Longleaf Pine Forests In Louisiana And Mississippi, Sara A. Simmons, Janice L. Bossart

Biological Sciences Faculty Publications

Controlled burning is an essential tool for restoration and management of Pinus palustris (Longleaf Pine) habitats, yet effects of controlled burning on insect species, including pollinators, are rarely considered in conservation planning. We used blue vane traps to sample native bees (Hymenoptera: Apoidea) at recently burned and unburned sites in 2 Longleaf Pine upland forests in Mississippi and Louisiana. Our objective was to quantify short-term effects of controlled burns given fire-return intervals of 1-2 years are now regularly employed to manage Longleaf Pine woodlands. We sampled during 2016 and 2017 and collected 1777 native bees, representing 43 species. Recent fire …

Protecting Biodiversity On National Forests: The Evolution And Implementation Of Forest Planning Regulations, Anna Wearn

Graduate Student Theses, Dissertations, & Professional Papers

In 2012, the U.S. Forest Service (USFS) promulgated new forest planning regulations that significantly altered national forest management. One of the most controversial and important advancements was the inclusion of what were meant to be stronger biodiversity protections. An analysis of USFS’s rationale in revising the biodiversity regulations provides insights into how to interpret the substantively and procedurally new ecosystem and species protections. Examining this regulatory history reveals three key changes to the manner in which national forests are required to manage and monitor biodiversity: 1) a greater reliance on science to inform planning, 2) a new emphasis on ecological …

Leaf Angle And Leaf Stomata Responses To Experimental Drought In Quercus Velutina And Acer Saccharum, Brittany Nichole Casey

Graduate Theses, Dissertations, and Problem Reports (ETD)

The possibility of increased severity and frequency of drought conditions, as a result of global climate variability, greatly complicates our ability to forecast future forest functions such as productivity and carbon sequestration. Assessing how tree species vary in their response to drought can aid in predicting the impact on forest ecosystems as a whole. Throughfall exclusion (TfE) experiments are potentially useful tools to simulate realistic drought conditions within intact forest ecosystems. We employed a TfE experiment during the 2018 growing season within the WV Land Trust’s Elizabeth’s Woods Nature Preserve, near Morgantown, WV, to assess the leaf angle and leaf …

Observable Persistent Effects Of Habitat Management Efforts In The Ozark Highlands After 10 Years, Maxwell Carnes-Mason

Graduate Theses and Dissertations

I investigated the lasting impacts of a management plan designed to improve oak regeneration and benefit wildlife in the Ozark Highlands in Madison, Co., AR. To assess the efficacy of the management plan, I used variables relevant to the success and establishment of oak trees. Controlled burns and selective logging were used to thin the canopy, increase ground level productivity, and increase the abundance of small mammals. I used measurements of overstory and understory densities, light availability, and the density of mice in the genus Peromyscus across time to look at the lasting impacts of management. Different treatment plots were …

Effects Of Water Table Depth And Edaphic Characteristics On Plant Diversity In A Southern Mississippi Pitcher Plant Bog, Patrick Kirby

Master's Theses

This study examined the effects that water table depth and soil characteristics have on plant species richness and species composition within pitcher plant bogs across seasons. Eight piezometers were installed at random distances to monitor long-term water table depth and pressure fluctuations along a ~710-meter line transect traversing upland and bog habitats. Vegetation sampling quadrats (n=128) were set up near each piezometer. Cover data and water table depths were collected in spring and late summer. Soil samples collected from each treatment group were used to obtain soil texture and nutrient data. The summer collection period yielded a total gdiversity of …

Spatial Upscaling Of Forest Response To Drought, Wei Fang, Peipei Xu, Tao Zhao, Xiang Zhao, Hui Luo, George Hendrey, Chuixiang Yi

Publications and Research

We have integrated the observational capability of satellite remote sensing with plot-scale tree ring data to up-scale the evaluation of forest responses to drought. Satellite data, such as Normalized Difference Vegetation Index (NDVI), can provide a spatially continuous measure with limited temporal coverage, while tree Ring Width Index (RWI) provides accurate assessment with much longer time series local scales. Here, we explored the relationship between RWI and NDVI of three dominant species in the Southwestern United States (SWUS), and predicted RWI spatial distribution from 2001 to 2017 based on MODIS 1-km resolution NDVI data with stringent quality control. We detected …